Rh6AG517800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
68821752 .. 68821985
234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG517800.1

Sequence Viewer

Length: 234 bp
ATGCTCGAGAATCGTATCCAAGATTTCATCGACCTTGAGATGCTGGCAAACATCACAAACCCACTTGTGATATCCAGAGCTGGTTGTTCCCCATGGAACAAAATCCAGTTTATTCAGGTTACTCATCCTAAAAGAGAACAAGAAATTAAGGTTAGTTTCGGAATGAAAAAAGGCTACCATGAAAACAATAGAATTTCTGAGCGTAGTCGCTTCCAAGAAATTAGAGATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

9.19

Weight (kDa)

8.98

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020485)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 192
AluBI AGCT 1 cut(s) 80
AluI AGCT 1 cut(s) 80
Ama87I CYCGRG 1 cut(s) 5
ApoI RAATTY 1 cut(s) 192
AvaI CYCGRG 1 cut(s) 5
BciVI GTATCC 1 cut(s) 26
BfuI GTATCC 1 cut(s) 26
BmeT110I CYCGRG 1 cut(s) 5
BmsI GCATC 1 cut(s) 30
BpuEI CTTGAG 1 cut(s) 56
BsaJI CCNNGG 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 106
BseDI CCNNGG 1 cut(s) 92
BseGI GGATG 1 cut(s) 124
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 1 cut(s) 106
BsiHKCI CYCGRG 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 5
Bsp19I CCATGG 1 cut(s) 92
BspCNI CTCAG 1 cut(s) 190
BsrI ACTGG 1 cut(s) 106
BssECI CCNNGG 1 cut(s) 92
BssT1I CCWWGG 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 198
BstDSI CCRYGG 1 cut(s) 92
BstF5I GGATG 1 cut(s) 124
BsuI GTATCC 1 cut(s) 26
BtgI CCRYGG 1 cut(s) 92
BtsCI GGATG 1 cut(s) 124
Cac8I GCNNGC 1 cut(s) 45
CviAII CATG 2 cut(s) 93, 179
CviJI RGCY 2 cut(s) 80, 174
CviKI_1 RGCY 2 cut(s) 80, 174
DdeI CTNAG 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 92
Eco32I GATATC 1 cut(s) 72
Eco88I CYCGRG 1 cut(s) 5
EcoRV GATATC 1 cut(s) 72
EcoT14I CCWWGG 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 92
FaeI CATG 2 cut(s) 96, 182
FaiI YATR 2 cut(s) 94, 180
FatI CATG 2 cut(s) 92, 178
FokI GGATG 1 cut(s) 111
Hin1II CATG 2 cut(s) 96, 182
HinfI GANTC 1 cut(s) 10
Hpy188I TCNGA 2 cut(s) 161, 199
Hpy188III TCNNGA 2 cut(s) 7, 75
HpyF3I CTNAG 1 cut(s) 198
Hsp92II CATG 2 cut(s) 96, 182
LpnPI CCDG 5 cut(s) 29, 66, 88, 101, 119
LweI GCATC 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 118
MluCI AATT 3 cut(s) 144, 192, 219
MseI TTAA 1 cut(s) 147
NcoI CCATGG 1 cut(s) 92
NlaIII CATG 2 cut(s) 96, 182
PaeR7I CTCGAG 1 cut(s) 5
PfeI GAWTC 1 cut(s) 10
SaqAI TTAA 1 cut(s) 147
SetI ASST 4 cut(s) 36, 82, 120, 153
SfaNI GCATC 1 cut(s) 30
Sfr274I CTCGAG 1 cut(s) 5
SlaI CTCGAG 1 cut(s) 5
SmlI CTYRAG 2 cut(s) 5, 35
SmoI CTYRAG 2 cut(s) 5, 35
Sse9I AATT 3 cut(s) 144, 192, 219
StyI CCWWGG 1 cut(s) 92
TaqI TCGA 2 cut(s) 6, 30
TasI AATT 3 cut(s) 144, 192, 219
TfiI GAWTC 1 cut(s) 10
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TspDTI ATGAA 3 cut(s) 16, 179, 195
XapI RAATTY 1 cut(s) 192
XhoI CTCGAG 1 cut(s) 5
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.