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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_2G00116860 Rroxscaffold_3G00246650 |
| rosa_rugosa | Rorug01G0078100 |
| rosa_samantha | Rh7CG285400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 21 |
| AccB1I | GGYRCC | 2 cut(s) | 21, 143 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 153 |
| AccI | GTMKAC | 1 cut(s) | 166 |
| AclWI | GGATC | 3 cut(s) | 39, 52, 98 |
| AfaI | GTAC | 3 cut(s) | 11, 23, 158 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 65, 97 |
| AluBI | AGCT | 1 cut(s) | 134 |
| AluI | AGCT | 1 cut(s) | 134 |
| AlwI | GGATC | 3 cut(s) | 39, 52, 98 |
| ApeKI | GCWGC | 1 cut(s) | 131 |
| Asp718I | GGTACC | 1 cut(s) | 21 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 148, 181 |
| BamHI | GGATCC | 1 cut(s) | 44 |
| BanI | GGYRCC | 2 cut(s) | 21, 143 |
| BbvI | GCAGC | 1 cut(s) | 143 |
| BceAI | ACGGC | 1 cut(s) | 157 |
| BciVI | GTATCC | 1 cut(s) | 52 |
| BfuI | GTATCC | 1 cut(s) | 52 |
| BisI | GCNGC | 1 cut(s) | 132 |
| BlsI | GCNGC | 1 cut(s) | 133 |
| BmiI | GGNNCC | 3 cut(s) | 23, 46, 145 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseXI | GCAGC | 1 cut(s) | 143 |
| BshNI | GGYRCC | 2 cut(s) | 21, 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bsp143I | GATC | 2 cut(s) | 44, 90 |
| BspLI | GGNNCC | 3 cut(s) | 23, 46, 145 |
| BspPI | GGATC | 3 cut(s) | 39, 52, 98 |
| BspT107I | GGYRCC | 2 cut(s) | 21, 143 |
| BssMI | GATC | 2 cut(s) | 44, 90 |
| BssNAI | GTATAC | 1 cut(s) | 167 |
| Bst1107I | GTATAC | 1 cut(s) | 167 |
| BstDEI | CTNAG | 1 cut(s) | 114 |
| BstKTI | GATC | 2 cut(s) | 47, 93 |
| BstMBI | GATC | 2 cut(s) | 44, 90 |
| BstV1I | GCAGC | 1 cut(s) | 143 |
| BstX2I | RGATCY | 2 cut(s) | 44, 90 |
| BstYI | RGATCY | 2 cut(s) | 44, 90 |
| BstZ17I | GTATAC | 1 cut(s) | 167 |
| BsuI | GTATCC | 1 cut(s) | 52 |
| Csp6I | GTAC | 3 cut(s) | 10, 22, 157 |
| CviAII | CATG | 2 cut(s) | 64, 126 |
| CviJI | RGCY | 2 cut(s) | 71, 134 |
| CviKI_1 | RGCY | 2 cut(s) | 71, 134 |
| CviQI | GTAC | 3 cut(s) | 10, 22, 157 |
| DdeI | CTNAG | 1 cut(s) | 114 |
| DpnI | GATC | 2 cut(s) | 46, 92 |
| DpnII | GATC | 2 cut(s) | 44, 90 |
| FaeI | CATG | 2 cut(s) | 67, 129 |
| FaiI | YATR | 4 cut(s) | 65, 127, 167, 187 |
| FatI | CATG | 2 cut(s) | 63, 125 |
| FblI | GTMKAC | 1 cut(s) | 166 |
| Fnu4HI | GCNGC | 1 cut(s) | 132 |
| Fsp4HI | GCNGC | 1 cut(s) | 132 |
| GluI | GCNGC | 1 cut(s) | 132 |
| Hin1II | CATG | 2 cut(s) | 67, 129 |
| Hpy166II | GTNNAC | 2 cut(s) | 10, 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 85, 94 |
| Hpy8I | GTNNAC | 2 cut(s) | 10, 167 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyF3I | CTNAG | 1 cut(s) | 114 |
| Hsp92II | CATG | 2 cut(s) | 67, 129 |
| KpnI | GGTACC | 1 cut(s) | 25 |
| Kzo9I | GATC | 2 cut(s) | 44, 90 |
| Lsp1109I | GCAGC | 1 cut(s) | 143 |
| MaeIII | GTNAC | 2 cut(s) | 109, 117 |
| MalI | GATC | 2 cut(s) | 46, 92 |
| MboI | GATC | 2 cut(s) | 44, 90 |
| MflI | RGATCY | 2 cut(s) | 44, 90 |
| MluCI | AATT | 2 cut(s) | 104, 151 |
| MnlI | CCTC | 3 cut(s) | 12, 35, 81 |
| MspA1I | CMGCKG | 1 cut(s) | 134 |
| NdeII | GATC | 2 cut(s) | 44, 90 |
| NlaIII | CATG | 2 cut(s) | 67, 129 |
| NlaIV | GGNNCC | 3 cut(s) | 23, 46, 145 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 153 |
| PkrI | GCNGC | 1 cut(s) | 133 |
| PspN4I | GGNNCC | 3 cut(s) | 23, 46, 145 |
| PsuI | RGATCY | 2 cut(s) | 44, 90 |
| PvuII | CAGCTG | 1 cut(s) | 134 |
| RsaI | GTAC | 3 cut(s) | 11, 23, 158 |
| RsaNI | GTAC | 3 cut(s) | 10, 22, 157 |
| SatI | GCNGC | 1 cut(s) | 132 |
| Sau3AI | GATC | 2 cut(s) | 44, 90 |
| SetI | ASST | 3 cut(s) | 23, 31, 136 |
| SgeI | CNNG | 9 cut(s) | 30, 48, 53, 67, 76, 97, 106, 138, 174 |
| Sse9I | AATT | 2 cut(s) | 104, 151 |
| TaqI | TCGA | 2 cut(s) | 37, 84 |
| TasI | AATT | 2 cut(s) | 104, 151 |
| TseI | GCWGC | 1 cut(s) | 131 |
| TspGWI | ACGGA | 1 cut(s) | 27 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 153 |
| XmiI | GTMKAC | 1 cut(s) | 166 |