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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g17830 |
| rosa_laevigata | RLG00000017655 RLG00000017656 |
| rosa_multiflora | Rmu_co8228899.1_g000001 Rmu_sc0007406.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00135360 |
| rosa_samantha | Rh2AG200400 Rh2BG213100 Rh2CG205100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 379 |
| AcoI | YGGCCR | 1 cut(s) | 49 |
| AcsI | RAATTY | 1 cut(s) | 90 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfaI | GTAC | 3 cut(s) | 188, 206, 376 |
| AgsI | TTSAA | 1 cut(s) | 109 |
| AluBI | AGCT | 3 cut(s) | 59, 197, 227 |
| AluI | AGCT | 3 cut(s) | 59, 197, 227 |
| Alw26I | GTCTC | 2 cut(s) | 331, 401 |
| AlwI | GGATC | 1 cut(s) | 379 |
| AoxI | GGCC | 3 cut(s) | 20, 49, 304 |
| ApoI | RAATTY | 1 cut(s) | 90 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 239, 271 |
| AsuC2I | CCSGG | 2 cut(s) | 87, 139 |
| BalI | TGGCCA | 1 cut(s) | 51 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 323, 357 |
| BcnI | CCSGG | 2 cut(s) | 87, 139 |
| BcoDI | GTCTC | 2 cut(s) | 331, 401 |
| BfaI | CTAG | 1 cut(s) | 345 |
| Bme1390I | CCNGG | 2 cut(s) | 87, 139 |
| BmrFI | CCNGG | 2 cut(s) | 87, 139 |
| BmsI | GCATC | 1 cut(s) | 349 |
| BoxI | GACNNNNGTC | 1 cut(s) | 314 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| BpuMI | CCSGG | 2 cut(s) | 87, 139 |
| BsaI | GGTCTC | 1 cut(s) | 331 |
| BsaJI | CCNNGG | 2 cut(s) | 23, 46 |
| BseDI | CCNNGG | 2 cut(s) | 23, 46 |
| BshFI | GGCC | 3 cut(s) | 22, 51, 306 |
| BsiSI | CCGG | 4 cut(s) | 87, 138, 307, 330 |
| BslFI | GGGAC | 1 cut(s) | 145 |
| BsmAI | GTCTC | 2 cut(s) | 331, 401 |
| BsmFI | GGGAC | 1 cut(s) | 145 |
| BsnI | GGCC | 3 cut(s) | 22, 51, 306 |
| Bso31I | GGTCTC | 1 cut(s) | 331 |
| Bsp143I | GATC | 3 cut(s) | 14, 173, 384 |
| Bsp19I | CCATGG | 1 cut(s) | 46 |
| BspANI | GGCC | 3 cut(s) | 22, 51, 306 |
| BspPI | GGATC | 1 cut(s) | 379 |
| BspTNI | GGTCTC | 1 cut(s) | 331 |
| BssECI | CCNNGG | 2 cut(s) | 23, 46 |
| BssMI | GATC | 3 cut(s) | 14, 173, 384 |
| BssT1I | CCWWGG | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 2 cut(s) | 104, 209 |
| BstDEI | CTNAG | 1 cut(s) | 11 |
| BstDSI | CCRYGG | 1 cut(s) | 46 |
| BstKTI | GATC | 3 cut(s) | 17, 176, 387 |
| BstMAI | GTCTC | 2 cut(s) | 331, 401 |
| BstMBI | GATC | 3 cut(s) | 14, 173, 384 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 314 |
| BstSCI | CCNGG | 2 cut(s) | 85, 137 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BsuRI | GGCC | 3 cut(s) | 22, 51, 306 |
| BtgI | CCRYGG | 1 cut(s) | 46 |
| Csp6I | GTAC | 3 cut(s) | 187, 205, 375 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 41, 76 |
| CviAII | CATG | 2 cut(s) | 47, 72 |
| CviQI | GTAC | 3 cut(s) | 187, 205, 375 |
| DdeI | CTNAG | 1 cut(s) | 11 |
| DpnI | GATC | 3 cut(s) | 16, 175, 386 |
| DpnII | GATC | 3 cut(s) | 14, 173, 384 |
| EaeI | YGGCCR | 1 cut(s) | 49 |
| Eco130I | CCWWGG | 1 cut(s) | 46 |
| Eco31I | GGTCTC | 1 cut(s) | 331 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| EcoRI | GAATTC | 1 cut(s) | 90 |
| EcoT14I | CCWWGG | 1 cut(s) | 46 |
| ErhI | CCWWGG | 1 cut(s) | 46 |
| FaeI | CATG | 2 cut(s) | 50, 75 |
| FaiI | YATR | 9 cut(s) | 48, 73, 122, 231, 288, 365, 379, 401, 403 |
| FaqI | GGGAC | 1 cut(s) | 145 |
| FatI | CATG | 2 cut(s) | 46, 71 |
| FauNDI | CATATG | 1 cut(s) | 401 |
| FspBI | CTAG | 1 cut(s) | 345 |
| HaeIII | GGCC | 3 cut(s) | 22, 51, 306 |
| HapII | CCGG | 4 cut(s) | 87, 138, 307, 330 |
| Hin1II | CATG | 2 cut(s) | 50, 75 |
| HindIII | AAGCTT | 2 cut(s) | 57, 225 |
| HpaII | CCGG | 4 cut(s) | 87, 138, 307, 330 |
| Hpy166II | GTNNAC | 1 cut(s) | 262 |
| Hpy188I | TCNGA | 1 cut(s) | 214 |
| Hpy188III | TCNNGA | 2 cut(s) | 177, 221 |
| Hpy8I | GTNNAC | 1 cut(s) | 262 |
| HpyCH4III | ACNGT | 2 cut(s) | 104, 209 |
| HpyCH4V | TGCA | 1 cut(s) | 81 |
| HpyF3I | CTNAG | 1 cut(s) | 11 |
| Hsp92II | CATG | 2 cut(s) | 50, 75 |
| Kzo9I | GATC | 3 cut(s) | 14, 173, 384 |
| LpnPI | CCDG | 5 cut(s) | 100, 125, 151, 320, 343 |
| LweI | GCATC | 1 cut(s) | 349 |
| MaeI | CTAG | 1 cut(s) | 345 |
| MalI | GATC | 3 cut(s) | 16, 175, 386 |
| MboI | GATC | 3 cut(s) | 14, 173, 384 |
| MboII | GAAGA | 3 cut(s) | 57, 60, 127 |
| MlsI | TGGCCA | 1 cut(s) | 51 |
| MluCI | AATT | 3 cut(s) | 90, 97, 366 |
| MluNI | TGGCCA | 1 cut(s) | 51 |
| MnlI | CCTC | 3 cut(s) | 18, 296, 305 |
| Mox20I | TGGCCA | 1 cut(s) | 51 |
| MscI | TGGCCA | 1 cut(s) | 51 |
| Msp20I | TGGCCA | 1 cut(s) | 51 |
| MspI | CCGG | 4 cut(s) | 87, 138, 307, 330 |
| MspR9I | CCNGG | 2 cut(s) | 87, 139 |
| NciI | CCSGG | 2 cut(s) | 87, 139 |
| NcoI | CCATGG | 1 cut(s) | 46 |
| NdeI | CATATG | 1 cut(s) | 401 |
| NdeII | GATC | 3 cut(s) | 14, 173, 384 |
| NlaIII | CATG | 2 cut(s) | 50, 75 |
| NmeAIII | GCCGAG | 1 cut(s) | 48 |
| PshAI | GACNNNNGTC | 1 cut(s) | 314 |
| RsaI | GTAC | 3 cut(s) | 188, 206, 376 |
| RsaNI | GTAC | 3 cut(s) | 187, 205, 375 |
| Sau3AI | GATC | 3 cut(s) | 14, 173, 384 |
| ScrFI | CCNGG | 2 cut(s) | 87, 139 |
| SetI | ASST | 6 cut(s) | 61, 114, 188, 199, 229, 394 |
| SfaNI | GCATC | 1 cut(s) | 349 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| Sse9I | AATT | 3 cut(s) | 90, 97, 366 |
| SspMI | CTAG | 1 cut(s) | 345 |
| StyD4I | CCNGG | 2 cut(s) | 85, 137 |
| StyI | CCWWGG | 1 cut(s) | 46 |
| TaaI | ACNGT | 2 cut(s) | 104, 209 |
| TaqI | TCGA | 1 cut(s) | 357 |
| TasI | AATT | 3 cut(s) | 90, 97, 366 |
| TspDTI | ATGAA | 1 cut(s) | 60 |
| TspGWI | ACGGA | 1 cut(s) | 260 |
| XapI | RAATTY | 1 cut(s) | 90 |
| XspI | CTAG | 1 cut(s) | 345 |