Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009312

Physical Location & Seq

Genomic Coordinates Reverse (-)

747731 .. 749758

Gene Structure 2028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00218470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGCTCTTCATCATCTCTCTCTCTATCCTAGGCTTGTTATTGGCTTCTCCGATCTCCAGTTCTTCCCAATCCGGATCCATCAATGTCTGGCCCATGCCGAGAAACTTTTCGTGGCCTGAGCCGCAGGCCAACCCCCTCTCCCCTAATTTCAACATCTTATCTCCAGATCATCGCTACCTGTCGTCCGCCGCCAAACGCTACCTGCATCTTATTCTCACCGAGCACCACTGCCCCCTGGTGAACCCCTCCTCCTCCGTCCGCGTCAACACTTCTGCGCCGCCATTGCTGACCCTCGCCATCACGGTTGCCGACCTCACTGCTCCCCTTCACCATGGTGTGGACGAGTCGTACAAACTTACCATCCCCGCCGCCGGGGGAACCGCCCATCTGACGGCCCAGACTGCGTGGGGCGCCATGAGGGGTCTCGAGACATTGTCGCAGCTGGTGTGGGGGAATCCCTCGCTCGTGGCTGTTGGGGTGTACGTGTGGGACTCCCCACTGTTCGGGCATAGAGGGCTCATGCTCGACACCTCTAGGAACTACTACGGAGTTGAGGATTTACTTAGGACCATCGAGACCATGAGCGCCAATAAGCTCAATGTGTTTCATTGGCACATCACTGACTCCCACTCTTTCCCGCTACTCGTGCCTTCGGAGCCTGAATTGGCCTCCAAGGGGTCTTATGGATCCAGTATGCAGTACTCTCCCGCTGAAGTCACAAAGATTGTGGAGTTCGGTTTGGAGCATGGTGTCAGGGTTCTACCGGAAATCGACTCACCTGGCCATACAGGATCATGGGCTGCAGCCTATCCCGATATAGTATCATGTGCAAATATGTTCTGGTGGCCAGCAGGAGTTGATTGGGGTGACCGACTCGCGTCCGAACCAGGAACAGGTCATCTAAATCCTTTGAACCCCAAGACCTATCAAGTGCTCAAAAACGTAATCCATGATGTGGCGACTTTATTCCCTGAACCATTGTACCACGGGGGTGCTGATGAGATCGTACCAGGTTGTTGGAAAGCGGATCCAACCATTCAATCATTCTTATCGAGGGGAGGAACTCTGAGTCAGCTACTCGAGCTTTTTGTCAATTCCACATTCCCTTACATTGTATCTCATAACAAGACAGTTGTATACTGGGAAGACGTGTTACTAGATGATAACATTAAGGTGCAATCAGCAGCTCTTCCCCGAGAGAATACCATCTTACAAACATGGAACAATGGACACAACAACACTAAACGAATTGTGTCTTCTGGATATCGTACAATCGTGTCATCCTCAGAATTTTACTACTTAGATTGTGGTCACGGTGACTTTCTTGGGAACGATAGCATATATGATCAACAAACAGGTAGTGACACAAAAGATGGAGGGTCATGGTGCGGGCCTTTCAAAACATGGCAAACCATATATAATTATGATATAACATATGGTCTAACTGAAGACGAGGCTAAATTGGTTTTAGGTGGAGAGGTGGCGCTTTGGTCTGAGCAAGCAGATCCAACAGTTTTGGATGCACGAATTTGGCCACGAACTTCAGCAATGGCAGAGTCATTGTGGTCAGGGAACCGGGATGATAAGGGTACGAAGAGATTTGCGGAGGCAACTGATCGCCTCAATGAATGGAGGAGTAGAATCGTGGCTAGAGGTGTTAGAGCTGAACCTATTCAGCCACTATGGTGTATTAAGAATCCAGGGATGTGCAACACTGTTAATTCACTCGGCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004563 GO:0005575 GO:0005623 GO:0005886 GO:0008194 GO:0015929 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016798 GO:0035251 GO:0044464 GO:0046527 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00511 ko00513 ko00520 ko00531 ko00603 ko00604 ko01100 ko04142 map00511 map00513 map00520 map00531 map00603 map00604 map01100 map04142

Pfam Domains

Protein Families

Glyco_hydro_20 Glycohydro_20b2

Protein Analysis

578

Amino Acids

63.75

Weight (kDa)

5.53

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycohydro_20b2	PF14845	29 - 148	1.3e-22	beta-acetyl hexosaminidase like
Glyco_hydro_20	PF00728	168 - 524	4.8e-100	Glycosyl hydrolase family 20, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05590 AT1G05590 AT1G05590
fragaria_vesca	FvH4_5g39620 FvH4_5g39620
prunus_persica	Prupe.2G001000_v2.0.a1
pyrus_communis	pycom02g26930 pycom07g00020
rosa_chinensis	RchiOBHm_Chr7g0241931
rosa_laevigata	RLG00000000529
rosa_multiflora	Rmu_co8432303.1_g000001 Rmu_sc0003266.1_g000015 Rmu_sc0003373.1_g000007 Rmu_sc0031877.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218470
rosa_rugosa	Rorug07G0348700
rosa_samantha	Rh7AG502800 Rh7BG474100 Rh7CG519600 Rh7DG488300 Rh7DG488400
rosa_wichuraiana	Rw7G042520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	210
AccB1I	GGYRCC	1 cut(s)	410
AccB7I	CCANNNNNTGG	2 cut(s)	337, 955
AccI	GTMKAC	1 cut(s)	1137
AccII	CGCG	2 cut(s)	261, 878
AccIII	TCCGGA	1 cut(s)	71
AclWI	GGATC	8 cut(s)	69, 82, 681, 694, 799, 1022, 1035, 1499
AcoI	YGGCCR	3 cut(s)	781, 845, 1532
AcsI	RAATTY	2 cut(s)	1289, 1527
AcuI	CTGAAG	3 cut(s)	732, 1467, 1527
AcyI	GRCGYC	1 cut(s)	411
AfaI	GTAC	7 cut(s)	350, 482, 701, 983, 1008, 1270, 1591
AfiI	CCNNNNNNNGG	8 cut(s)	337, 371, 372, 391, 503, 675, 893, 955
AflIII	ACRYGT	2 cut(s)	483, 1149
AgsI	TTSAA	4 cut(s)	151, 913, 1040, 1399
AjiI	CACGTC	1 cut(s)	1150
AjnI	CCWGG	5 cut(s)	234, 778, 886, 1009, 1699
AleI	CACNNNNGTG	3 cut(s)	333, 990, 1684
AloI	GAACNNNNNNTCC	2 cut(s)	233, 265
AluBI	AGCT	6 cut(s)	442, 595, 1075, 1084, 1187, 1664
AluI	AGCT	6 cut(s)	442, 595, 1075, 1084, 1187, 1664
Alw21I	GWGCWC	2 cut(s)	225, 936
Alw26I	GTCTC	3 cut(s)	422, 428, 569
AlwI	GGATC	8 cut(s)	69, 82, 681, 694, 799, 1022, 1035, 1499
Ama87I	CYCGRG	3 cut(s)	425, 1079, 1194
Aor13HI	TCCGGA	1 cut(s)	71
AoxI	GGCC	9 cut(s)	89, 113, 126, 393, 666, 781, 845, 1391, 1532
ApeKI	GCWGC	4 cut(s)	439, 800, 803, 1184
ApoI	RAATTY	2 cut(s)	1289, 1527
Asp700I	GAANNNNTTC	2 cut(s)	106, 1671
AspA2I	CCTAGG	1 cut(s)	28
AspLEI	GCGC	4 cut(s)	277, 413, 587, 1486
AspS9I	GGNCC	4 cut(s)	90, 394, 567, 1391
AsuC2I	CCSGG	2 cut(s)	373, 1577
AsuHPI	GGTGA	6 cut(s)	208, 250, 320, 768, 878, 1328
AvaI	CYCGRG	3 cut(s)	425, 1079, 1194
AvaII	GGWCC	1 cut(s)	567
AvrII	CCTAGG	1 cut(s)	28
BaeI	ACNNNNGTAYC	2 cut(s)	965, 998
BalI	TGGCCA	3 cut(s)	783, 847, 1534
BamHI	GGATCC	3 cut(s)	74, 686, 1027
BanI	GGYRCC	1 cut(s)	410
BanII	GRGCYC	1 cut(s)	519
BarI	GAAGNNNNNNTAC	2 cut(s)	1137, 1169
BauI	CACGAG	2 cut(s)	464, 644
BbsI	GAAGAC	3 cut(s)	1152, 1248, 1455
Bbv12I	GWGCWC	2 cut(s)	225, 936
BbvI	GCAGC	4 cut(s)	451, 787, 815, 1196
BccI	CCATC	7 cut(s)	86, 305, 368, 393, 578, 1214, 1367
BceAI	ACGGC	1 cut(s)	408
BcgI	CGANNNNNNTGC	2 cut(s)	299, 333
BciT130I	CCWGG	5 cut(s)	236, 780, 888, 1011, 1701
BclI	TGATCA	1 cut(s)	1345
BcnI	CCSGG	2 cut(s)	373, 1577
BcoDI	GTCTC	3 cut(s)	422, 428, 569
BfaI	CTAG	4 cut(s)	29, 534, 1157, 1650
BfmI	CTRYAG	1 cut(s)	801
BfoI	RGCGCY	3 cut(s)	414, 588, 1487
BfuAI	ACCTGC	1 cut(s)	210
BisI	GCNGC	8 cut(s)	122, 189, 278, 369, 440, 801, 804, 1185
BlnI	CCTAGG	1 cut(s)	28
BlsI	GCNGC	8 cut(s)	123, 190, 279, 370, 441, 802, 805, 1186
BmcAI	AGTACT	1 cut(s)	701
Bme1390I	CCNGG	7 cut(s)	236, 373, 780, 888, 1011, 1577, 1701
Bme18I	GGWCC	1 cut(s)	567
BmeT110I	CYCGRG	3 cut(s)	425, 1079, 1194
BmgBI	CACGTC	1 cut(s)	1150
BmgT120I	GGNCC	4 cut(s)	90, 394, 567, 1391
BmiI	GGNNCC	7 cut(s)	76, 379, 412, 657, 688, 1029, 1574
BmrFI	CCNGG	7 cut(s)	236, 373, 780, 888, 1011, 1577, 1701
BmrI	ACTGGG	1 cut(s)	1150
BmsI	GCATC	2 cut(s)	214, 1510
BmuI	ACTGGG	1 cut(s)	1150
BoxI	GACNNNNGTC	1 cut(s)	877
BpiI	GAAGAC	3 cut(s)	1152, 1248, 1455
BpmI	CTGGAG	2 cut(s)	40, 147
Bpu10I	CCTNAGC	1 cut(s)	117
BpuMI	CCSGG	2 cut(s)	373, 1577
BsaAI	YACGTR	1 cut(s)	484
BsaHI	GRCGYC	1 cut(s)	411
BsaI	GGTCTC	2 cut(s)	428, 569
BsaJI	CCNNGG	7 cut(s)	28, 234, 331, 372, 672, 985, 1700
BsaWI	WCCGGW	2 cut(s)	71, 763
BsaXI	ACNNNNNCTCC	4 cut(s)	122, 152, 233, 263
Bsc4I	CCNNNNNNNGG	8 cut(s)	337, 371, 372, 391, 503, 675, 893, 955
Bse1I	ACTGG	3 cut(s)	57, 690, 1145
Bse3DI	GCAATG	2 cut(s)	281, 1554
BseAI	TCCGGA	1 cut(s)	71
BseBI	CCWGG	5 cut(s)	236, 780, 888, 1011, 1701
BseDI	CCNNGG	7 cut(s)	28, 234, 331, 372, 672, 985, 1700
BseGI	GGATG	5 cut(s)	360, 1280, 1525, 1585, 1710
BseLI	CCNNNNNNNGG	8 cut(s)	337, 371, 372, 391, 503, 675, 893, 955
BseMI	GCAATG	2 cut(s)	281, 1554
BseMII	CTCAG	4 cut(s)	108, 1058, 1299, 1485
BseNI	ACTGG	3 cut(s)	57, 690, 1145
BseRI	GAGGAG	3 cut(s)	238, 241, 1648
BseXI	GCAGC	4 cut(s)	451, 787, 815, 1196
Bsh1236I	CGCG	2 cut(s)	261, 878
BshFI	GGCC	9 cut(s)	91, 115, 128, 395, 668, 783, 847, 1393, 1534
BshNI	GGYRCC	1 cut(s)	410
BsiHKAI	GWGCWC	2 cut(s)	225, 936
BsiHKCI	CYCGRG	3 cut(s)	425, 1079, 1194
BsiSI	CCGG	4 cut(s)	72, 372, 764, 1576
BslFI	GGGAC	1 cut(s)	503
BslI	CCNNNNNNNGG	8 cut(s)	337, 371, 372, 391, 503, 675, 893, 955
BsmAI	GTCTC	3 cut(s)	422, 428, 569
BsmFI	GGGAC	1 cut(s)	503
BsnI	GGCC	9 cut(s)	91, 115, 128, 395, 668, 783, 847, 1393, 1534
Bso31I	GGTCTC	2 cut(s)	428, 569
BsoBI	CYCGRG	3 cut(s)	425, 1079, 1194
Bsp1286I	GDGCHC	3 cut(s)	225, 519, 936
Bsp13I	TCCGGA	1 cut(s)	71
Bsp19I	CCATGG	1 cut(s)	331
BspANI	GGCC	9 cut(s)	91, 115, 128, 395, 668, 783, 847, 1393, 1534
BspCNI	CTCAG	4 cut(s)	109, 1059, 1298, 1486
BspEI	TCCGGA	1 cut(s)	71
BspFNI	CGCG	2 cut(s)	261, 878
BspLI	GGNNCC	7 cut(s)	76, 379, 412, 657, 688, 1029, 1574
BspMAI	CTGCAG	1 cut(s)	805
BspMI	ACCTGC	1 cut(s)	210
BspPI	GGATC	8 cut(s)	69, 82, 681, 694, 799, 1022, 1035, 1499
BspQI	GCTCTTC	2 cut(s)	11, 1194
BspT107I	GGYRCC	1 cut(s)	410
BspTNI	GGTCTC	2 cut(s)	428, 569
BsrDI	GCAATG	2 cut(s)	281, 1554
BsrI	ACTGG	3 cut(s)	57, 690, 1145
BssECI	CCNNGG	7 cut(s)	28, 234, 331, 372, 672, 985, 1700
BssNAI	GTATAC	1 cut(s)	1138
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	2 cut(s)	464, 644
BssT1I	CCWWGG	3 cut(s)	28, 331, 672
Bst1107I	GTATAC	1 cut(s)	1138
Bst2BI	CACGAG	2 cut(s)	464, 644
Bst2UI	CCWGG	5 cut(s)	236, 780, 888, 1011, 1701
Bst4CI	ACNGT	6 cut(s)	304, 501, 1132, 1316, 1513, 1717
Bst6I	CTCTTC	3 cut(s)	11, 1194, 1589
BstACI	GRCGYC	1 cut(s)	411
BstBAI	YACGTR	1 cut(s)	484
BstC8I	GCNNGC	4 cut(s)	126, 849, 1391, 1500
BstDEI	CTNAG	6 cut(s)	117, 563, 1067, 1285, 1300, 1494
BstDSI	CCRYGG	2 cut(s)	331, 985
BstEII	GGTNACC	1 cut(s)	866
BstF5I	GGATG	5 cut(s)	360, 1280, 1525, 1585, 1710
BstFNI	CGCG	2 cut(s)	261, 878
BstH2I	RGCGCY	3 cut(s)	414, 588, 1487
BstHHI	GCGC	4 cut(s)	277, 413, 587, 1486
BstMAI	GTCTC	3 cut(s)	422, 428, 569
BstMWI	GCNNNNNNNGC	8 cut(s)	121, 283, 401, 410, 514, 646, 655, 1081
BstNI	CCWGG	5 cut(s)	236, 780, 888, 1011, 1701
BstPAI	GACNNNNGTC	1 cut(s)	877
BstPI	GGTNACC	1 cut(s)	866
BstSCI	CCNGG	7 cut(s)	234, 371, 778, 886, 1009, 1575, 1699
BstSFI	CTRYAG	1 cut(s)	801
BstUI	CGCG	2 cut(s)	261, 878
BstV1I	GCAGC	4 cut(s)	451, 787, 815, 1196
BstV2I	GAAGAC	3 cut(s)	1152, 1248, 1455
BstX2I	RGATCY	4 cut(s)	74, 686, 1027, 1504
BstXI	CCANNNNNNTGG	1 cut(s)	1017
BstYI	RGATCY	4 cut(s)	74, 686, 1027, 1504
BstZ17I	GTATAC	1 cut(s)	1138
BsuRI	GGCC	9 cut(s)	91, 115, 128, 395, 668, 783, 847, 1393, 1534
BtgI	CCRYGG	2 cut(s)	331, 985
BtgZI	GCGATG	1 cut(s)	155
BtrI	CACGTC	1 cut(s)	1150
BtsCI	GGATG	5 cut(s)	360, 1280, 1525, 1585, 1710
BtsI	GCAGTG	2 cut(s)	226, 315
BtsIMutI	CAGTG	5 cut(s)	226, 315, 497, 618, 1713
BveI	ACCTGC	1 cut(s)	210
Cac8I	GCNNGC	4 cut(s)	126, 849, 1391, 1500
CfoI	GCGC	4 cut(s)	277, 413, 587, 1486
Cfr13I	GGNCC	4 cut(s)	90, 394, 567, 1391
CseI	GACGC	2 cut(s)	250, 867
CsiI	ACCWGGT	1 cut(s)	1009
Csp6I	GTAC	7 cut(s)	349, 481, 700, 982, 1007, 1269, 1590
CspCI	CAANNNNNGTGG	2 cut(s)	708, 743
CviQI	GTAC	7 cut(s)	349, 481, 700, 982, 1007, 1269, 1590
DdeI	CTNAG	6 cut(s)	117, 563, 1067, 1285, 1300, 1494
DinI	GGCGCC	1 cut(s)	412
EaeI	YGGCCR	3 cut(s)	781, 845, 1532
Eam1104I	CTCTTC	3 cut(s)	11, 1194, 1589
EarI	CTCTTC	3 cut(s)	11, 1194, 1589
EciI	GGCGGA	1 cut(s)	175
Eco130I	CCWWGG	3 cut(s)	28, 331, 672
Eco24I	GRGCYC	1 cut(s)	519
Eco31I	GGTCTC	2 cut(s)	428, 569
Eco32I	GATATC	1 cut(s)	1265
Eco47I	GGWCC	1 cut(s)	567
Eco57I	CTGAAG	3 cut(s)	732, 1467, 1527
Eco88I	CYCGRG	3 cut(s)	425, 1079, 1194
Eco91I	GGTNACC	1 cut(s)	866
EcoO65I	GGTNACC	1 cut(s)	866
EcoRII	CCWGG	5 cut(s)	234, 778, 886, 1009, 1699
EcoRV	GATATC	1 cut(s)	1265
EcoT14I	CCWWGG	3 cut(s)	28, 331, 672
EcoT38I	GRGCYC	1 cut(s)	519
EgeI	GGCGCC	1 cut(s)	412
EheI	GGCGCC	1 cut(s)	412
ErhI	CCWWGG	3 cut(s)	28, 331, 672
FaqI	GGGAC	1 cut(s)	503
FauI	CCCGC	4 cut(s)	373, 645, 715, 1382
FauNDI	CATATG	1 cut(s)	1435
FbaI	TGATCA	1 cut(s)	1345
FblI	GTMKAC	1 cut(s)	1137
Fnu4HI	GCNGC	8 cut(s)	122, 189, 278, 369, 440, 801, 804, 1185
FokI	GGATG	5 cut(s)	347, 1267, 1532, 1592, 1717
FriOI	GRGCYC	1 cut(s)	519
Fsp4HI	GCNGC	8 cut(s)	122, 189, 278, 369, 440, 801, 804, 1185
FspBI	CTAG	4 cut(s)	29, 534, 1157, 1650
GlaI	GCGC	4 cut(s)	276, 412, 586, 1485
GluI	GCNGC	8 cut(s)	122, 189, 278, 369, 440, 801, 804, 1185
GsuI	CTGGAG	2 cut(s)	40, 147
HaeII	RGCGCY	3 cut(s)	414, 588, 1487
HaeIII	GGCC	9 cut(s)	91, 115, 128, 395, 668, 783, 847, 1393, 1534
HapII	CCGG	4 cut(s)	72, 372, 764, 1576
HgaI	GACGC	2 cut(s)	250, 867
HhaI	GCGC	4 cut(s)	277, 413, 587, 1486
Hin1I	GRCGYC	1 cut(s)	411
Hin6I	GCGC	4 cut(s)	275, 411, 585, 1484
HinP1I	GCGC	4 cut(s)	275, 411, 585, 1484
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HpaII	CCGG	4 cut(s)	72, 372, 764, 1576
HphI	GGTGA	6 cut(s)	208, 250, 320, 768, 878, 1328
Hpy166II	GTNNAC	5 cut(s)	241, 265, 340, 481, 1138
Hpy188I	TCNGA	7 cut(s)	51, 390, 655, 883, 1068, 1288, 1495
Hpy188III	TCNNGA	7 cut(s)	72, 164, 425, 427, 574, 812, 1260
Hpy8I	GTNNAC	5 cut(s)	241, 265, 340, 481, 1138
HpyAV	CCTTC	2 cut(s)	335, 660
HpyCH4III	ACNGT	6 cut(s)	304, 501, 1132, 1316, 1513, 1717
HpyCH4IV	ACGT	3 cut(s)	483, 942, 1149
HpyCH4V	TGCA	7 cut(s)	205, 697, 803, 830, 1177, 1523, 1710
HpyF10VI	GCNNNNNNNGC	8 cut(s)	121, 283, 401, 410, 514, 646, 655, 1081
HpyF3I	CTNAG	6 cut(s)	117, 563, 1067, 1285, 1300, 1494
HpySE526I	ACGT	3 cut(s)	483, 942, 1149
Hsp92I	GRCGYC	1 cut(s)	411
HspAI	GCGC	4 cut(s)	275, 411, 585, 1484
KasI	GGCGCC	1 cut(s)	410
Kpn2I	TCCGGA	1 cut(s)	71
Ksp22I	TGATCA	1 cut(s)	1345
LguI	GCTCTTC	2 cut(s)	11, 1194
LmnI	GCTCC	3 cut(s)	325, 655, 742
Lsp1109I	GCAGC	4 cut(s)	451, 787, 815, 1196
LweI	GCATC	2 cut(s)	214, 1510
MabI	ACCWGGT	1 cut(s)	1009
MaeI	CTAG	4 cut(s)	29, 534, 1157, 1650
MaeII	ACGT	3 cut(s)	483, 942, 1149
MaeIII	GTNAC	6 cut(s)	715, 866, 1152, 1310, 1316, 1361
MboII	GAAGA	6 cut(s)	54, 1157, 1181, 1248, 1460, 1606
MflI	RGATCY	4 cut(s)	74, 686, 1027, 1504
MhlI	GDGCHC	3 cut(s)	225, 519, 936
MlsI	TGGCCA	3 cut(s)	783, 847, 1534
MluCI	AATT	9 cut(s)	145, 662, 1093, 1248, 1289, 1420, 1460, 1527, 1720
MluNI	TGGCCA	3 cut(s)	783, 847, 1534
Mly113I	GGCGCC	1 cut(s)	411
MlyI	GAGTC	7 cut(s)	353, 485, 617, 767, 867, 1078, 1565
MmeI	TCCRAC	3 cut(s)	998, 1055, 1532
Mox20I	TGGCCA	3 cut(s)	783, 847, 1534
MroI	TCCGGA	1 cut(s)	71
MroXI	GAANNNNTTC	2 cut(s)	106, 1671
MscI	TGGCCA	3 cut(s)	783, 847, 1534
MseI	TTAA	3 cut(s)	1170, 1692, 1719
MslI	CAYNNNNRTG	4 cut(s)	333, 990, 1172, 1684
Msp20I	TGGCCA	3 cut(s)	783, 847, 1534
MspA1I	CMGCKG	2 cut(s)	442, 710
MspI	CCGG	4 cut(s)	72, 372, 764, 1576
MspR9I	CCNGG	7 cut(s)	236, 373, 780, 888, 1011, 1577, 1701
MvaI	CCWGG	5 cut(s)	236, 780, 888, 1011, 1701
MvnI	CGCG	2 cut(s)	261, 878
MwoI	GCNNNNNNNGC	8 cut(s)	121, 283, 401, 410, 514, 646, 655, 1081
NarI	GGCGCC	1 cut(s)	411
NciI	CCSGG	2 cut(s)	373, 1577
NcoI	CCATGG	1 cut(s)	331
NdeI	CATATG	1 cut(s)	1435
NlaIV	GGNNCC	7 cut(s)	76, 379, 412, 657, 688, 1029, 1574
NmeAIII	GCCGAG	2 cut(s)	123, 1707
NmuCI	GTSAC	5 cut(s)	715, 866, 1310, 1316, 1361
OliI	CACNNNNGTG	3 cut(s)	333, 990, 1684
PaeR7I	CTCGAG	2 cut(s)	425, 1079
PciSI	GCTCTTC	2 cut(s)	11, 1194
PdmI	GAANNNNTTC	2 cut(s)	106, 1671
PfeI	GAWTC	3 cut(s)	454, 1641, 1696
PflFI	GACNNNGTC	1 cut(s)	433
PflMI	CCANNNNNTGG	2 cut(s)	337, 955
PkrI	GCNGC	8 cut(s)	123, 190, 279, 370, 441, 802, 805, 1186
PleI	GAGTC	7 cut(s)	352, 485, 617, 767, 867, 1077, 1564
PluTI	GGCGCC	1 cut(s)	414
PpsI	GAGTC	7 cut(s)	352, 485, 617, 767, 867, 1077, 1564
Ppu21I	YACGTR	1 cut(s)	484
PshAI	GACNNNNGTC	1 cut(s)	877
Psp6I	CCWGG	5 cut(s)	234, 778, 886, 1009, 1699
PspEI	GGTNACC	1 cut(s)	866
PspGI	CCWGG	5 cut(s)	234, 778, 886, 1009, 1699
PspN4I	GGNNCC	7 cut(s)	76, 379, 412, 657, 688, 1029, 1574
PspPI	GGNCC	4 cut(s)	90, 394, 567, 1391
PspXI	VCTCGAGB	1 cut(s)	1079
PstI	CTGCAG	1 cut(s)	805
PsuI	RGATCY	4 cut(s)	74, 686, 1027, 1504
PsyI	GACNNNGTC	1 cut(s)	433
PvuII	CAGCTG	1 cut(s)	442
RsaI	GTAC	7 cut(s)	350, 482, 701, 983, 1008, 1270, 1591
RsaNI	GTAC	7 cut(s)	349, 481, 700, 982, 1007, 1269, 1590
RseI	CAYNNNNRTG	4 cut(s)	333, 990, 1172, 1684
SapI	GCTCTTC	2 cut(s)	11, 1194
SaqAI	TTAA	3 cut(s)	1170, 1692, 1719
SatI	GCNGC	8 cut(s)	122, 189, 278, 369, 440, 801, 804, 1185
Sau96I	GGNCC	4 cut(s)	90, 394, 567, 1391
ScaI	AGTACT	1 cut(s)	701
SchI	GAGTC	7 cut(s)	353, 485, 617, 767, 867, 1078, 1565
ScrFI	CCNGG	7 cut(s)	236, 373, 780, 888, 1011, 1577, 1701
SduI	GDGCHC	3 cut(s)	225, 519, 936
SexAI	ACCWGGT	1 cut(s)	1009
SfaNI	GCATC	2 cut(s)	214, 1510
SfcI	CTRYAG	1 cut(s)	801
SfoI	GGCGCC	1 cut(s)	412
Sfr274I	CTCGAG	2 cut(s)	425, 1079
SinI	GGWCC	1 cut(s)	567
SlaI	CTCGAG	2 cut(s)	425, 1079
SmiMI	CAYNNNNRTG	4 cut(s)	333, 990, 1172, 1684
SmlI	CTYRAG	2 cut(s)	425, 1079
SmoI	CTYRAG	2 cut(s)	425, 1079
Sse9I	AATT	9 cut(s)	145, 662, 1093, 1248, 1289, 1420, 1460, 1527, 1720
SspDI	GGCGCC	1 cut(s)	410
SspMI	CTAG	4 cut(s)	29, 534, 1157, 1650
StyD4I	CCNGG	7 cut(s)	234, 371, 778, 886, 1009, 1575, 1699
StyI	CCWWGG	3 cut(s)	28, 331, 672
TaaI	ACNGT	6 cut(s)	304, 501, 1132, 1316, 1513, 1717
TaiI	ACGT	3 cut(s)	486, 945, 1152
TaqI	TCGA	6 cut(s)	426, 525, 573, 771, 1052, 1080
TaqII	GACCGA	1 cut(s)	885
TasI	AATT	9 cut(s)	145, 662, 1093, 1248, 1289, 1420, 1460, 1527, 1720
TatI	WGTACW	1 cut(s)	699
TauI	GCSGC	4 cut(s)	124, 191, 280, 371
TfiI	GAWTC	3 cut(s)	454, 1641, 1696
Tru1I	TTAA	3 cut(s)	1170, 1692, 1719
Tru9I	TTAA	3 cut(s)	1170, 1692, 1719
TscAI	CASTG	5 cut(s)	233, 322, 504, 625, 1720
TseFI	GTSAC	5 cut(s)	715, 866, 1310, 1316, 1361
TseI	GCWGC	4 cut(s)	439, 800, 803, 1184
Tsp45I	GTSAC	5 cut(s)	715, 866, 1310, 1316, 1361
TspDTI	ATGAA	2 cut(s)	596, 1641
TspGWI	ACGGA	2 cut(s)	244, 561
TspRI	CASTG	5 cut(s)	233, 322, 504, 625, 1720
Tth111I	GACNNNGTC	1 cut(s)	433
Van91I	CCANNNNNTGG	2 cut(s)	337, 955
VpaK11BI	GGWCC	1 cut(s)	567
XapI	RAATTY	2 cut(s)	1289, 1527
XhoI	CTCGAG	2 cut(s)	425, 1079
XmaJI	CCTAGG	1 cut(s)	28
XmiI	GTMKAC	1 cut(s)	1137
XmnI	GAANNNNTTC	2 cut(s)	106, 1671
XspI	CTAG	4 cut(s)	29, 534, 1157, 1650
ZrmI	AGTACT	1 cut(s)	701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.