Rroxscaffold_3G00259710

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0018208
Physical Location & Seq
Reverse (-)
54110708 .. 54112324
1617 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00259710.1

Sequence Viewer

Length: 1617 bp
ATGACAACTAAATTCTTTCTGCTGTCGTTCTCCCTCTTGATCACCGCAGCTGCTGGCGCCGGCGGCCGATGGCAGGTATTGCAGAAAAGTATTGGGGTTTCAGCCATGCACATGCAGCTGCTGCGCAACGACCGAGTCATCATGTTCGACCGAACGAATTTCGGAAAATCAAATTTGTCGCTGCCGAGGGGAATCTGCCGGAGGAACCCGAATGACACCGCGTTGAAGGTCGACTGTACCGCACATTCGGTCGAGTACGACGTCGTGAGTAACTCTTTCCGACCGCTCATGCTGTTTACCGACTCCTGGTGCTCCTCTGGGTCAGTCAGCCCCAACGGCAGTCTCGTTCAGACTGGAGGGTGGAAGGATGGCCAGCAAAGGGTGAGACTGTTTGAGCCATGCAGCACTTGTGATTGGGTGGAGATTGAGAGTGCGCTGACCCACCCAAGGTGGTATGCAACAAATCACATCCTGCCAGATGGCAGGATTATAATCGTTGGCGGACGCGCGCAACCAAACTTTGAATTTTTTCCGAAGATCAAGGAGGGGGAGGCGTCCATCACTGTGCCTTTCCTTAAAGAAACGAAGGACGACGTAGAGGACAATCTGTACCCTTTTGTTTTCCTCAACGTTGACGGCAATTTATTCATATATGCCAACAATAGAGCAATTCTATTGAACTACGTTACCGGAGATGTTGTGAAGACTTATCCTACAATACCGGGCGGCGATCCGAGATCGTACCCGAGCACGGGTTCGGCGGTCTTGCTCCCTTTGAAGGTTCAAAACGGTACCGTGGAGCAAGCGCAAGTTCTTGTCTGCGGCGGAGCTCCGTTAGGGTCTTACGATAAGGCTCTCAACGAAGGAGTTTTCCAGGATGCCTTGAACACTTGCGCTCGGATGACGATAACAGGTCCCAATCCTCATTGGACTTTGGAGACCATGCCCGGCCCTCGAGTCATGGCGGACATGACTTTGTTGCCTGATGGAAATGTCCTTATAATCAATGGGGCATCGAAAGGTGCGGCAGGCTGGGACTTGGGCCGAGGGCCGGTTTTGAACCCAGTTCTTTACAAGACGGAAAATCCCGCCGATACTCGCTTTGAGACCATGAATCCAACGTCCATCCCGCGCATGTACCACTCAACCGCCGTTCTCTTACGTGACGGTCGCGTGTTGGTCGGTGGGAGCAATCCTCACCAGGGATATGAGTTTTACTCGGTGCTCTTCCCAACAGAACTTTCCTTGGAAGCATTTTATCCGGAATATCTCAATCCTAAATTCTCCGATGTTCGTCCCACAGTCAGTGCACCCAAATCCCAACAAGTTGTTGGCTACGGGCAAAAGGTGCAGATTGAATTTTCTATATCTGGGACACTAGCCGCGCAGTCCTTGTTCGCATCGATGATTTCTCCATCGTTTTCAACCCACTCGTTCTCCATGAACCAACGCTCACTACTTCTCCCCATCGACAATGTCGTATCAGCTCGTAATCTGACATTTCAAGCGCAGCTCACCATGCCAAGTGATCCTAACCTGGCTCCCTCGTCGTATTATCTGCTCTTTGTTGTTCATCAAAACATACCAAGTGAGGCCACTTGGATCCGCATTGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

538

Amino Acids

59.17

Weight (kDa)

6.52

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 36 - 423 1.9e-180 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 432 - 537 4.1e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018208)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0196161
rosa_laevigata RLG00000003166 RLG00000004057
rosa_multiflora Rmu_sc0000821.1_g000022 Rmu_sc0033762.1_g000001
rosa_roxburghii Rroxscaffold_3G00249710 Rroxscaffold_3G00259710
rosa_rugosa Rorug07G0031400
rosa_samantha Rh7CG162600
rosa_wichuraiana Rw7G013430 Rw7G020650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 491, 1001
AatII GACGTC 1 cut(s) 264
Acc16I TGCGCA 1 cut(s) 125
Acc36I ACCTGC 1 cut(s) 64
Acc65I GGTACC 1 cut(s) 791
AccB1I GGYRCC 2 cut(s) 56, 791
AccBSI CCGCTC 1 cut(s) 286
AccI GTMKAC 1 cut(s) 231
AccII CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
AccIII TCCGGA 1 cut(s) 1261
AclI AACGTT 1 cut(s) 630
AclWI GGATC 4 cut(s) 725, 1523, 1597, 1610
AcoI YGGCCR 2 cut(s) 64, 370
AcsI RAATTY 6 cut(s) 11, 157, 172, 524, 1280, 1358
AcyI GRCGYC 3 cut(s) 57, 261, 554
AfaI GTAC 6 cut(s) 238, 257, 611, 743, 793, 1139
AfiI CCNNNNNNNGG 9 cut(s) 73, 306, 379, 447, 751, 752, 778, 1051, 1202
AjnI CCWGG 4 cut(s) 305, 873, 1200, 1536
AjuI GAANNNNNNNTTGG 2 cut(s) 1225, 1257
AluBI AGCT 5 cut(s) 50, 118, 830, 1487, 1513
AluI AGCT 5 cut(s) 50, 118, 830, 1487, 1513
Alw21I GWGCWC 5 cut(s) 314, 752, 832, 1227, 1312
Alw26I GTCTC 4 cut(s) 347, 379, 932, 1100
Alw44I GTGCAC 1 cut(s) 1308
AlwI GGATC 4 cut(s) 725, 1523, 1597, 1610
AlwNI CAGNNNCTG 2 cut(s) 53, 121
Ama87I CYCGRG 2 cut(s) 745, 954
Aor13HI TCCGGA 1 cut(s) 1261
AoxI GGCC 6 cut(s) 64, 370, 949, 1042, 1049, 1593
ApaLI GTGCAC 1 cut(s) 1308
ApeKI GCWGC 8 cut(s) 47, 50, 115, 118, 121, 181, 402, 1510
ApoI RAATTY 6 cut(s) 11, 157, 172, 524, 1280, 1358
Asp700I GAANNNNTTC 1 cut(s) 528
Asp718I GGTACC 1 cut(s) 791
AspS9I GGNCC 4 cut(s) 914, 950, 1042, 1049
AsuC2I CCSGG 2 cut(s) 723, 948
AsuHPI GGTGA 4 cut(s) 34, 394, 1190, 1507
AvaI CYCGRG 2 cut(s) 745, 954
AvaII GGWCC 1 cut(s) 914
BaeGI GKGCMC 1 cut(s) 1312
BalI TGGCCA 1 cut(s) 372
BamHI GGATCC 1 cut(s) 1602
BanI GGYRCC 2 cut(s) 56, 791
BanII GRGCYC 1 cut(s) 832
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 5 cut(s) 314, 752, 832, 1227, 1312
BbvI GCAGC 8 cut(s) 37, 59, 105, 108, 127, 168, 414, 1522
BccI CCATC 8 cut(s) 63, 362, 473, 566, 980, 1133, 1423, 1475
BceAI ACGGC 3 cut(s) 352, 652, 1136
BciT130I CCWGG 4 cut(s) 307, 875, 1202, 1538
BclI TGATCA 1 cut(s) 39
BcnI CCSGG 2 cut(s) 723, 948
BcoDI GTCTC 4 cut(s) 347, 379, 932, 1100
BfaI CTAG 1 cut(s) 1379
BfoI RGCGCY 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 64
BglI GCCNNNNNGGC 1 cut(s) 336
Bme1390I CCNGG 6 cut(s) 307, 723, 875, 948, 1202, 1538
Bme18I GGWCC 1 cut(s) 914
BmeT110I CYCGRG 2 cut(s) 745, 954
BmgT120I GGNCC 4 cut(s) 914, 950, 1042, 1049
BmiI GGNNCC 6 cut(s) 58, 206, 793, 916, 1542, 1604
BmrFI CCNGG 6 cut(s) 307, 723, 875, 948, 1202, 1538
BmrI ACTGGG 1 cut(s) 1058
BmsI GCATC 3 cut(s) 868, 1022, 1409
BmuI ACTGGG 1 cut(s) 1058
BpiI GAAGAC 1 cut(s) 710
BplI GAGNNNNNCTC 4 cut(s) 1180, 1212, 1202, 1234
BpmI CTGGAG 1 cut(s) 375
BpuMI CCSGG 2 cut(s) 723, 948
Bsa29I ATCGAT 1 cut(s) 1403
BsaAI YACGTR 1 cut(s) 1163
BsaBI GATNNNNATC 1 cut(s) 491
BsaHI GRCGYC 3 cut(s) 57, 261, 554
BsaI GGTCTC 2 cut(s) 932, 1100
BsaJI CCNNGG 6 cut(s) 185, 446, 795, 1045, 1201, 1245
BsaWI WCCGGW 2 cut(s) 689, 1261
BsaXI ACNNNNNCTCC 6 cut(s) 684, 714, 1421, 1446, 1451, 1476
Bsc4I CCNNNNNNNGG 9 cut(s) 73, 306, 379, 447, 751, 752, 778, 1051, 1202
Bse118I RCCGGY 2 cut(s) 59, 1051
Bse1I ACTGG 2 cut(s) 358, 1064
Bse3DI GCAATG 1 cut(s) 1608
Bse8I GATNNNNATC 1 cut(s) 491
BseAI TCCGGA 1 cut(s) 1261
BseBI CCWGG 4 cut(s) 307, 875, 1202, 1538
BseCI ATCGAT 1 cut(s) 1403
BseDI CCNNGG 6 cut(s) 185, 446, 795, 1045, 1201, 1245
BseGI GGATG 5 cut(s) 373, 468, 883, 906, 1125
BseJI GATNNNNATC 1 cut(s) 491
BseLI CCNNNNNNNGG 9 cut(s) 73, 306, 379, 447, 751, 752, 778, 1051, 1202
BseMI GCAATG 1 cut(s) 1608
BseNI ACTGG 2 cut(s) 358, 1064
BsePI GCGCGC 1 cut(s) 507
BseRI GAGGAG 1 cut(s) 304
BseSI GKGCMC 1 cut(s) 1312
BseX3I CGGCCG 1 cut(s) 64
BseXI GCAGC 8 cut(s) 37, 59, 105, 108, 127, 168, 414, 1522
BseYI CCCAGC 1 cut(s) 1032
BsgI GTGCAG 1 cut(s) 1370
Bsh1236I CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
Bsh1285I CGRYCG 6 cut(s) 67, 133, 151, 252, 284, 1171
BshFI GGCC 6 cut(s) 66, 372, 951, 1044, 1051, 1595
BshNI GGYRCC 2 cut(s) 56, 791
BshVI ATCGAT 1 cut(s) 1403
BsiEI CGRYCG 6 cut(s) 67, 133, 151, 252, 284, 1171
BsiHKAI GWGCWC 5 cut(s) 314, 752, 832, 1227, 1312
BsiHKCI CYCGRG 2 cut(s) 745, 954
BsiSI CCGG 7 cut(s) 60, 199, 690, 722, 948, 1052, 1262
BslFI GGGAC 4 cut(s) 900, 1049, 1281, 1387
BslI CCNNNNNNNGG 9 cut(s) 73, 306, 379, 447, 751, 752, 778, 1051, 1202
BsmAI GTCTC 4 cut(s) 347, 379, 932, 1100
BsmFI GGGAC 4 cut(s) 900, 1049, 1281, 1387
BsnI GGCC 6 cut(s) 66, 372, 951, 1044, 1051, 1595
Bso31I GGTCTC 2 cut(s) 932, 1100
BsoBI CYCGRG 2 cut(s) 745, 954
Bsp1286I GDGCHC 5 cut(s) 314, 752, 832, 1227, 1312
Bsp13I TCCGGA 1 cut(s) 1261
Bsp143I GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
BspANI GGCC 6 cut(s) 66, 372, 951, 1044, 1051, 1595
BspDI ATCGAT 1 cut(s) 1403
BspEI TCCGGA 1 cut(s) 1261
BspFNI CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
BspLI GGNNCC 6 cut(s) 58, 206, 793, 916, 1542, 1604
BspMI ACCTGC 1 cut(s) 64
BspPI GGATC 4 cut(s) 725, 1523, 1597, 1610
BspQI GCTCTTC 1 cut(s) 1232
BspT107I GGYRCC 2 cut(s) 56, 791
BspTNI GGTCTC 2 cut(s) 932, 1100
BsrBI CCGCTC 1 cut(s) 286
BsrDI GCAATG 1 cut(s) 1608
BsrFI RCCGGY 2 cut(s) 59, 1051
BsrI ACTGG 2 cut(s) 358, 1064
BssAI RCCGGY 2 cut(s) 59, 1051
BssECI CCNNGG 6 cut(s) 185, 446, 795, 1045, 1201, 1245
BssHII GCGCGC 1 cut(s) 507
BssMI GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
BssNI GRCGYC 3 cut(s) 57, 261, 554
BssT1I CCWWGG 2 cut(s) 446, 1245
Bst2UI CCWGG 4 cut(s) 307, 875, 1202, 1538
Bst4CI ACNGT 7 cut(s) 236, 390, 565, 791, 796, 1169, 1303
Bst6I CTCTTC 1 cut(s) 1232
BstACI GRCGYC 3 cut(s) 57, 261, 554
BstAPI GCANNNNNTGC 3 cut(s) 79, 121, 1348
BstBAI YACGTR 1 cut(s) 1163
BstC8I GCNNGC 6 cut(s) 55, 61, 374, 509, 804, 1030
BstDSI CCRYGG 1 cut(s) 795
BstF5I GGATG 5 cut(s) 373, 468, 883, 906, 1125
BstFNI CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
BstH2I RGCGCY 1 cut(s) 60
BstKTI GATC 6 cut(s) 42, 540, 733, 740, 1531, 1605
BstMAI GTCTC 4 cut(s) 347, 379, 932, 1100
BstMBI GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
BstMCI CGRYCG 6 cut(s) 67, 133, 151, 252, 284, 1171
BstMWI GCNNNNNNNGC 8 cut(s) 56, 63, 79, 115, 121, 336, 1348, 1519
BstNI CCWGG 4 cut(s) 307, 875, 1202, 1538
BstNSI RCATGY 2 cut(s) 115, 1138
BstSCI CCNGG 6 cut(s) 305, 721, 873, 946, 1200, 1536
BstSLI GKGCMC 1 cut(s) 1312
BstUI CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
BstV1I GCAGC 8 cut(s) 37, 59, 105, 108, 127, 168, 414, 1522
BstV2I GAAGAC 1 cut(s) 710
BstX2I RGATCY 1 cut(s) 1602
BstYI RGATCY 1 cut(s) 1602
BstZI CGGCCG 1 cut(s) 64
Bsu15I ATCGAT 1 cut(s) 1403
BsuRI GGCC 6 cut(s) 66, 372, 951, 1044, 1051, 1595
BsuTUI ATCGAT 1 cut(s) 1403
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 5 cut(s) 373, 468, 883, 906, 1125
BtsIMutI CAGTG 2 cut(s) 561, 1312
BveI ACCTGC 1 cut(s) 64
Cac8I GCNNGC 6 cut(s) 55, 61, 374, 509, 804, 1030
CaiI CAGNNNCTG 2 cut(s) 53, 121
Cfr10I RCCGGY 2 cut(s) 59, 1051
Cfr13I GGNCC 4 cut(s) 914, 950, 1042, 1049
ClaI ATCGAT 1 cut(s) 1403
CseI GACGC 2 cut(s) 513, 543
Csp6I GTAC 6 cut(s) 237, 256, 610, 742, 792, 1138
CviQI GTAC 6 cut(s) 237, 256, 610, 742, 792, 1138
DinI GGCGCC 1 cut(s) 58
DpnI GATC 6 cut(s) 41, 539, 732, 739, 1530, 1604
DpnII GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
EaeI YGGCCR 2 cut(s) 64, 370
EagI CGGCCG 1 cut(s) 64
Eam1104I CTCTTC 1 cut(s) 1232
EarI CTCTTC 1 cut(s) 1232
EciI GGCGGA 3 cut(s) 516, 840, 980
Ecl136II GAGCTC 1 cut(s) 830
EclXI CGGCCG 1 cut(s) 64
Eco130I CCWWGG 2 cut(s) 446, 1245
Eco24I GRGCYC 1 cut(s) 832
Eco31I GGTCTC 2 cut(s) 932, 1100
Eco47I GGWCC 1 cut(s) 914
Eco52I CGGCCG 1 cut(s) 64
Eco53kI GAGCTC 1 cut(s) 830
Eco88I CYCGRG 2 cut(s) 745, 954
EcoICRI GAGCTC 1 cut(s) 830
EcoO109I RGGNCCY 1 cut(s) 914
EcoRII CCWGG 4 cut(s) 305, 873, 1200, 1536
EcoT14I CCWWGG 2 cut(s) 446, 1245
EcoT38I GRGCYC 1 cut(s) 832
EgeI GGCGCC 1 cut(s) 58
EheI GGCGCC 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 446, 1245
FaqI GGGAC 4 cut(s) 900, 1049, 1281, 1387
FauI CCCGC 2 cut(s) 1096, 1137
FbaI TGATCA 1 cut(s) 39
FblI GTMKAC 1 cut(s) 231
FokI GGATG 5 cut(s) 380, 455, 890, 913, 1112
FriOI GRGCYC 1 cut(s) 832
FspBI CTAG 1 cut(s) 1379
FspI TGCGCA 1 cut(s) 125
GsaI CCCAGC 1 cut(s) 1036
GsuI CTGGAG 1 cut(s) 375
HaeII RGCGCY 1 cut(s) 60
HaeIII GGCC 6 cut(s) 66, 372, 951, 1044, 1051, 1595
HapII CCGG 7 cut(s) 60, 199, 690, 722, 948, 1052, 1262
HgaI GACGC 2 cut(s) 513, 543
Hin1I GRCGYC 3 cut(s) 57, 261, 554
HincII GTYRAC 2 cut(s) 232, 634
HindII GTYRAC 2 cut(s) 232, 634
HinfI GANTC 5 cut(s) 135, 192, 302, 957, 1114
HpaII CCGG 7 cut(s) 60, 199, 690, 722, 948, 1052, 1262
HphI GGTGA 4 cut(s) 34, 394, 1190, 1507
Hpy166II GTNNAC 4 cut(s) 232, 297, 634, 1310
Hpy188I TCNGA 8 cut(s) 164, 281, 351, 534, 735, 900, 1288, 1497
Hpy188III TCNNGA 3 cut(s) 37, 265, 1262
Hpy8I GTNNAC 4 cut(s) 232, 297, 634, 1310
Hpy99I CGWCG 4 cut(s) 263, 266, 596, 1552
HpyAV CCTTC 5 cut(s) 220, 358, 580, 772, 857
HpyCH4III ACNGT 7 cut(s) 236, 390, 565, 791, 796, 1169, 1303
HpyCH4IV ACGT 6 cut(s) 261, 594, 630, 684, 1121, 1162
HpyCH4V TGCA 7 cut(s) 82, 109, 115, 402, 458, 1310, 1351
HpyF10VI GCNNNNNNNGC 8 cut(s) 56, 63, 79, 115, 121, 336, 1348, 1519
HpySE526I ACGT 6 cut(s) 261, 594, 630, 684, 1121, 1162
Hsp92I GRCGYC 3 cut(s) 57, 261, 554
KasI GGCGCC 1 cut(s) 56
Kpn2I TCCGGA 1 cut(s) 1261
KpnI GGTACC 1 cut(s) 795
KroI GCCGGC 1 cut(s) 59
KroNI GCCGGC 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 39
Kzo9I GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
LguI GCTCTTC 1 cut(s) 1232
LmnI GCTCC 7 cut(s) 317, 774, 799, 827, 835, 1188, 1546
Lsp1109I GCAGC 8 cut(s) 37, 59, 105, 108, 127, 168, 414, 1522
LweI GCATC 3 cut(s) 868, 1022, 1409
MaeI CTAG 1 cut(s) 1379
MaeII ACGT 6 cut(s) 261, 594, 630, 684, 1121, 1162
MaeIII GTNAC 3 cut(s) 269, 685, 1163
MalI GATC 6 cut(s) 41, 539, 732, 739, 1530, 1604
MbiI CCGCTC 1 cut(s) 286
MboI GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
MboII GAAGA 3 cut(s) 547, 715, 1219
MflI RGATCY 1 cut(s) 1602
MhlI GDGCHC 5 cut(s) 314, 752, 832, 1227, 1312
MlsI TGGCCA 1 cut(s) 372
MluCI AATT 8 cut(s) 11, 157, 172, 524, 640, 669, 1280, 1358
MluNI TGGCCA 1 cut(s) 372
Mly113I GGCGCC 1 cut(s) 57
MlyI GAGTC 3 cut(s) 144, 296, 966
MmeI TCCRAC 2 cut(s) 304, 1142
Mox20I TGGCCA 1 cut(s) 372
MreI CGCCGGCG 1 cut(s) 59
MroI TCCGGA 1 cut(s) 1261
MroNI GCCGGC 1 cut(s) 59
MroXI GAANNNNTTC 1 cut(s) 528
MscI TGGCCA 1 cut(s) 372
MseI TTAA 1 cut(s) 576
MslI CAYNNNNRTG 2 cut(s) 110, 563
Msp20I TGGCCA 1 cut(s) 372
MspA1I CMGCKG 2 cut(s) 50, 118
MspI CCGG 7 cut(s) 60, 199, 690, 722, 948, 1052, 1262
MspR9I CCNGG 6 cut(s) 307, 723, 875, 948, 1202, 1538
MvaI CCWGG 4 cut(s) 307, 875, 1202, 1538
MvnI CGCG 6 cut(s) 221, 507, 509, 1132, 1173, 1385
MwoI GCNNNNNNNGC 8 cut(s) 56, 63, 79, 115, 121, 336, 1348, 1519
NaeI GCCGGC 1 cut(s) 61
NarI GGCGCC 1 cut(s) 57
NciI CCSGG 2 cut(s) 723, 948
NdeII GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
NgoMIV GCCGGC 1 cut(s) 59
NlaIV GGNNCC 6 cut(s) 58, 206, 793, 916, 1542, 1604
NmeAIII GCCGAG 2 cut(s) 210, 1070
NmuCI GTSAC 1 cut(s) 1163
NsbI TGCGCA 1 cut(s) 125
NspI RCATGY 2 cut(s) 115, 1138
PaeR7I CTCGAG 1 cut(s) 954
PauI GCGCGC 1 cut(s) 507
PciSI GCTCTTC 1 cut(s) 1232
PcsI WCGNNNNNNNCGW 3 cut(s) 258, 342, 1476
PdiI GCCGGC 1 cut(s) 61
PdmI GAANNNNTTC 1 cut(s) 528
PfeI GAWTC 2 cut(s) 192, 1114
PflFI GACNNNGTC 2 cut(s) 134, 1475
PfoI TCCNGGA 1 cut(s) 873
PleI GAGTC 3 cut(s) 143, 296, 965
PluTI GGCGCC 1 cut(s) 60
PpsI GAGTC 3 cut(s) 143, 296, 965
Ppu21I YACGTR 1 cut(s) 1163
PpuMI RGGWCCY 1 cut(s) 914
PsiI TTATAA 2 cut(s) 491, 1001
Psp124BI GAGCTC 1 cut(s) 832
Psp1406I AACGTT 1 cut(s) 630
Psp5II RGGWCCY 1 cut(s) 914
Psp6I CCWGG 4 cut(s) 305, 873, 1200, 1536
PspFI CCCAGC 1 cut(s) 1032
PspGI CCWGG 4 cut(s) 305, 873, 1200, 1536
PspN4I GGNNCC 6 cut(s) 58, 206, 793, 916, 1542, 1604
PspPI GGNCC 4 cut(s) 914, 950, 1042, 1049
PspPPI RGGWCCY 1 cut(s) 914
PspXI VCTCGAGB 1 cut(s) 954
PstNI CAGNNNCTG 2 cut(s) 53, 121
PsuI RGATCY 1 cut(s) 1602
PsyI GACNNNGTC 2 cut(s) 134, 1475
PteI GCGCGC 1 cut(s) 507
PvuII CAGCTG 2 cut(s) 50, 118
RsaI GTAC 6 cut(s) 238, 257, 611, 743, 793, 1139
RsaNI GTAC 6 cut(s) 237, 256, 610, 742, 792, 1138
RseI CAYNNNNRTG 2 cut(s) 110, 563
SacI GAGCTC 1 cut(s) 832
SalI GTCGAC 1 cut(s) 230
SapI GCTCTTC 1 cut(s) 1232
SaqAI TTAA 1 cut(s) 576
Sau3AI GATC 6 cut(s) 39, 537, 730, 737, 1528, 1602
Sau96I GGNCC 4 cut(s) 914, 950, 1042, 1049
SchI GAGTC 3 cut(s) 144, 296, 966
ScrFI CCNGG 6 cut(s) 307, 723, 875, 948, 1202, 1538
SduI GDGCHC 5 cut(s) 314, 752, 832, 1227, 1312
SfaNI GCATC 3 cut(s) 868, 1022, 1409
SfoI GGCGCC 1 cut(s) 58
Sfr274I CTCGAG 1 cut(s) 954
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 1 cut(s) 914
SlaI CTCGAG 1 cut(s) 954
SmiMI CAYNNNNRTG 2 cut(s) 110, 563
SmlI CTYRAG 1 cut(s) 954
SmoI CTYRAG 1 cut(s) 954
Sse9I AATT 8 cut(s) 11, 157, 172, 524, 640, 669, 1280, 1358
SspDI GGCGCC 1 cut(s) 56
SspMI CTAG 1 cut(s) 1379
SstI GAGCTC 1 cut(s) 832
StyD4I CCNGG 6 cut(s) 305, 721, 873, 946, 1200, 1536
StyI CCWWGG 2 cut(s) 446, 1245
TaaI ACNGT 7 cut(s) 236, 390, 565, 791, 796, 1169, 1303
TaiI ACGT 6 cut(s) 264, 597, 633, 687, 1124, 1165
TaqI TCGA 7 cut(s) 147, 231, 252, 955, 1016, 1403, 1470
TaqII GACCGA 3 cut(s) 147, 165, 238
TasI AATT 8 cut(s) 11, 157, 172, 524, 640, 669, 1280, 1358
TauI GCSGC 5 cut(s) 66, 729, 825, 1028, 1385
TfiI GAWTC 2 cut(s) 192, 1114
Tru1I TTAA 1 cut(s) 576
Tru9I TTAA 1 cut(s) 576
TscAI CASTG 2 cut(s) 568, 1312
TseFI GTSAC 1 cut(s) 1163
TseI GCWGC 8 cut(s) 47, 50, 115, 118, 121, 181, 402, 1510
Tsp45I GTSAC 1 cut(s) 1163
TspDTI ATGAA 4 cut(s) 637, 1127, 1457, 1562
TspGWI ACGGA 2 cut(s) 822, 1094
TspRI CASTG 2 cut(s) 568, 1312
Tth111I GACNNNGTC 2 cut(s) 134, 1475
VneI GTGCAC 1 cut(s) 1308
VpaK11BI GGWCC 1 cut(s) 914
XapI RAATTY 6 cut(s) 11, 157, 172, 524, 1280, 1358
XceI RCATGY 2 cut(s) 115, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 1328
XhoI CTCGAG 1 cut(s) 954
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 1 cut(s) 528
XspI CTAG 1 cut(s) 1379
ZraI GACGTC 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.