Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0014903

Physical Location & Seq

Genomic Coordinates Reverse (-)

62259401 .. 62261752

Gene Structure 2352 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGCGCAGAACCCATTTCGCTTCTTCGTCCTAACCTTCTCAGCTCTCATCTTCACTACCCTTTTACCTCCCACACTCTCCCGCACCGTAGTATCAGACACCACTGTTCTCGACGTCGCCGGTTCTCTCAGCCAGGCCGATGACGTCATCTCCTTCGACCCGCAAACCCTCAAGCCTTTGGACCACCAAGAAGCAGCTGAGCTACAACCACAAGCCCAGCTCAACTCCTCCACGGTTTCGTCGCTCACTCTCCAGCTCCACCCCCGTGAGTCTCTCTACACCTCCCAGCACAAGGACTACAGGTCGTTGGTCCTCACCCGCCTCGCCCGCGACTCGGCCCGAGTCGACTCGCTCAACACCAAGCTCCAGTTTGCTCTGCAGGGGGTGAACCGGGCGGATCTGGAGCCCATGCAGACGGAGATCCGACCCGAGGACTTGTCCACTCCGGTTACTTCCGGGATCAGCTTGGGAAGCGGTGAGTACTTCACACGCGTCGGCGTCGGCAACCCGGCGAAGCAGTTTTACATGGTGTTGGATACCGGCAGTGACGTCAATTGGCTCCAATGCCAGCCTTGCTCCGACTGTTTCCAGCAAGCCGACCCGGTTTTCAACCCCACCGGATCCTCTACCTTCCGCCAGCTCTCATGCGACGCGCCGCAATGCTCCGCTCTCCAGGTCTCCGCCTGCCGCAACGGCAAGTGCCTCTACCAGGTCTCCTACGGCGACGGCTCGTACACCGTCGGCGACTACGTGACGGAAACGGTGTCGTTCGGGAACTCCGGCGCGATCAACACCATCGCGTTGGGATGCGGCCACGACAACGAGGGTTTGTTCGTCGCGGCGGCCGGACTGCTCGGACTCGGCGGCGGTACTCTCTCACTTCCTTCGCAAGTTAAAGCTTCGTCGCTGTCGTACTGCCTCGTCAACCGCGACTCCAGCGCGTCGTCCACACTCGAGTTCAACTCTGCCGCACCGCGTGACTCCGTCATCGCGCCGCTGCTGAAGAACCGCAAACTCGGAACCTTCTACTATGTCGGACTCACCGGGTTCAGCGTCGGCGGCCGTCCGGTGTCGATTCCGCCGTCGCTTTTTCAGATGGACGAAGCCGGCAACGGCGGGATCATCGTCGACTCGGGAACCGCCATCACTCGGCTGCAGACGGAGGCCTACAACGCGCTCCGCGACGCGTTCAAGCGACTCTCGCCTGACCTTACTCCCGCGGGTAGCTTCGCGCTGTTCGACACGTGTTACGATCTCTCGGGAAAAACTAGCGTGCGGGTCCCAACGTTGTCGTTTCTATTTTCGGGTGGGAAAAGCTTTCCTCTCCCCGCCAAGAACTACTTGATTCCGGTGGACAACTCGGGCACTTTCTGCTTCGCCTTCGCTCCGACGTCGTCGGCTCTGTCCATCATCGGAAACGTCCAGCAGCAAGGGACACGTGTCAGTTACGACTTGGCGAACAATCGCGTCGGATTCTCTTCAAACAAGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0010033 GO:0010035 GO:0012505 GO:0016787 GO:0019538 GO:0030163 GO:0033993 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0070001 GO:0070011 GO:0071704 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

497

Amino Acids

53.12

Weight (kDa)

5.34

Isoelectric Point (pI)

38.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	160 - 292	1.4e-09	Eukaryotic aspartyl protease
TAXi_N	PF14543	161 - 320	1e-45	Xylanase inhibitor N-terminal
TAXi_C	PF14541	343 - 493	2.2e-36	Xylanase inhibitor C-terminal
Asp	PF00026	373 - 493	1.5e-08	Eukaryotic aspartyl protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18490
fragaria_vesca	FvH4_5g12520
malus_domestica	MD14G1223600.v1.1 MD14G1223700.v1.1
prunus_persica	Prupe.5G218800_v2.0.a1
pyrus_communis	pycom06g18990 pycom14g18490
rosa_chinensis	RchiOBHm_Chr7g0184841
rosa_laevigata	RLG00000004950
rosa_roxburghii	Rroxscaffold_3G00269340
rosa_rugosa	Rorug06G0465300
rosa_samantha	Rh7AG077600 Rh7BG069700 Rh7CG070500 Rh7DG069900
rosa_wichuraiana	Rw7G005780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	4 cut(s)	117, 147, 552, 1394
AccBSI	CCGCTC	1 cut(s)	668
AccI	GTMKAC	2 cut(s)	345, 1128
AclI	AACGTT	1 cut(s)	1286
AclWI	GGATC	6 cut(s)	405, 415, 467, 615, 628, 1127
AcoI	YGGCCR	3 cut(s)	811, 843, 1060
AcuI	CTGAAG	1 cut(s)	1022
AcvI	CACGTG	2 cut(s)	1245, 1439
AcyI	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
AdeI	CACNNNGTG	1 cut(s)	977
AfaI	GTAC	4 cut(s)	482, 734, 871, 914
AfiI	CCNNNNNNNGG	5 cut(s)	292, 334, 430, 709, 1149
AflIII	ACRYGT	6 cut(s)	490, 1185, 1242, 1244, 1436, 1438
AgsI	TTSAA	4 cut(s)	610, 961, 1192, 1482
AhdI	GACNNNNNGTC	1 cut(s)	301
AjnI	CCWGG	3 cut(s)	132, 672, 708
AleI	CACNNNNGTG	1 cut(s)	264
Alw26I	GTCTC	3 cut(s)	276, 682, 718
AlwI	GGATC	6 cut(s)	405, 415, 467, 615, 628, 1127
Ama87I	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
AoxI	GGCC	6 cut(s)	135, 336, 811, 843, 1060, 1164
ApeKI	GCWGC	4 cut(s)	194, 997, 1153, 1426
AspLEI	GCGC	7 cut(s)	7, 655, 785, 941, 994, 1177, 1234
AspS9I	GGNCC	4 cut(s)	181, 310, 337, 1279
AsuC2I	CCSGG	5 cut(s)	392, 457, 509, 602, 1045
AsuHPI	GGTGA	4 cut(s)	307, 397, 488, 1033
AvaI	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
AvaII	GGWCC	3 cut(s)	181, 310, 1279
BaeGI	GKGCMC	1 cut(s)	1367
BaeI	ACNNNNGTAYC	2 cut(s)	75, 108
BamHI	GGATCC	1 cut(s)	620
BanII	GRGCYC	1 cut(s)	408
BarI	GAAGNNNNNNTAC	2 cut(s)	506, 538
BbrPI	CACGTG	2 cut(s)	1245, 1439
BbvI	GCAGC	4 cut(s)	206, 984, 1140, 1438
BccI	CCATC	4 cut(s)	803, 1090, 1151, 1415
BceAI	ACGGC	6 cut(s)	709, 736, 742, 1047, 1066, 1129
BciT130I	CCWGG	3 cut(s)	134, 674, 710
BciVI	GTATCC	1 cut(s)	529
BcnI	CCSGG	5 cut(s)	392, 457, 509, 602, 1045
BcoDI	GTCTC	3 cut(s)	276, 682, 718
BfaI	CTAG	1 cut(s)	1269
BfmI	CTRYAG	3 cut(s)	298, 377, 1154
BfuI	GTATCC	1 cut(s)	529
BglI	GCCNNNNNGGC	1 cut(s)	693
BlpI	GCTNAGC	1 cut(s)	198
BmcAI	AGTACT	1 cut(s)	482
Bme1390I	CCNGG	8 cut(s)	134, 392, 457, 509, 602, 674, 710, 1045
Bme18I	GGWCC	3 cut(s)	181, 310, 1279
BmeRI	GACNNNNNGTC	1 cut(s)	301
BmeT110I	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
BmgT120I	GGNCC	4 cut(s)	181, 310, 337, 1279
BmiI	GGNNCC	7 cut(s)	405, 560, 622, 1021, 1138, 1280, 1281
BmrFI	CCNGG	8 cut(s)	134, 392, 457, 509, 602, 674, 710, 1045
BmsI	GCATC	1 cut(s)	797
BoxI	GACNNNNGTC	1 cut(s)	1439
BplI	GAGNNNNNCTC	2 cut(s)	947, 979
BpmI	CTGGAG	5 cut(s)	236, 350, 422, 656, 919
Bpu1102I	GCTNAGC	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	5 cut(s)	392, 457, 509, 602, 1045
BsaAI	YACGTR	3 cut(s)	751, 1245, 1439
BsaHI	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
BsaI	GGTCTC	2 cut(s)	682, 718
BsaJI	CCNNGG	3 cut(s)	231, 429, 1218
BsaWI	WCCGGW	4 cut(s)	445, 617, 1066, 1348
BsaXI	ACNNNNNCTCC	6 cut(s)	134, 164, 698, 728, 917, 947
Bsc4I	CCNNNNNNNGG	5 cut(s)	292, 334, 430, 709, 1149
Bse118I	RCCGGY	3 cut(s)	119, 539, 1106
Bse1I	ACTGG	1 cut(s)	367
Bse3DI	GCAATG	1 cut(s)	665
BseBI	CCWGG	3 cut(s)	134, 674, 710
BseDI	CCNNGG	3 cut(s)	231, 429, 1218
BseGI	GGATG	1 cut(s)	812
BseLI	CCNNNNNNNGG	5 cut(s)	292, 334, 430, 709, 1149
BseMI	GCAATG	1 cut(s)	665
BseMII	CTCAG	3 cut(s)	54, 142, 189
BseNI	ACTGG	1 cut(s)	367
BseRI	GAGGAG	1 cut(s)	217
BseSI	GKGCMC	1 cut(s)	1367
BseX3I	CGGCCG	2 cut(s)	843, 1060
BseXI	GCAGC	4 cut(s)	206, 984, 1140, 1438
BseYI	CCCAGC	2 cut(s)	216, 285
Bsh1285I	CGRYCG	2 cut(s)	846, 1063
BshFI	GGCC	6 cut(s)	137, 338, 813, 845, 1062, 1166
BsiEI	CGRYCG	2 cut(s)	846, 1063
BsiHKCI	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
BslFI	GGGAC	2 cut(s)	1265, 1447
BslI	CCNNNNNNNGG	5 cut(s)	292, 334, 430, 709, 1149
BsmAI	GTCTC	3 cut(s)	276, 682, 718
BsmFI	GGGAC	2 cut(s)	1265, 1447
BsnI	GGCC	6 cut(s)	137, 338, 813, 845, 1062, 1166
Bso31I	GGTCTC	2 cut(s)	682, 718
BsoBI	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
Bsp1286I	GDGCHC	2 cut(s)	408, 1367
Bsp143I	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
Bsp1720I	GCTNAGC	1 cut(s)	198
BspANI	GGCC	6 cut(s)	137, 338, 813, 845, 1062, 1166
BspCNI	CTCAG	3 cut(s)	53, 141, 190
BspLI	GGNNCC	7 cut(s)	405, 560, 622, 1021, 1138, 1280, 1281
BspMAI	CTGCAG	2 cut(s)	381, 1158
BspPI	GGATC	6 cut(s)	405, 415, 467, 615, 628, 1127
BspTNI	GGTCTC	2 cut(s)	682, 718
BsrBI	CCGCTC	1 cut(s)	668
BsrDI	GCAATG	1 cut(s)	665
BsrFI	RCCGGY	3 cut(s)	119, 539, 1106
BsrI	ACTGG	1 cut(s)	367
BssAI	RCCGGY	3 cut(s)	119, 539, 1106
BssECI	CCNNGG	3 cut(s)	231, 429, 1218
BssMI	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
BssNI	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
Bst2UI	CCWGG	3 cut(s)	134, 674, 710
Bst4CI	ACNGT	6 cut(s)	88, 106, 235, 584, 739, 763
Bst6I	CTCTTC	1 cut(s)	1483
BstACI	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
BstAPI	GCANNNNNTGC	1 cut(s)	1371
BstBAI	YACGTR	3 cut(s)	751, 1245, 1439
BstC8I	GCNNGC	7 cut(s)	328, 569, 594, 638, 685, 1108, 1274
BstDEI	CTNAG	3 cut(s)	40, 128, 198
BstDSI	CCRYGG	2 cut(s)	231, 1218
BstENI	CCTNNNNNAGG	1 cut(s)	707
BstF5I	GGATG	1 cut(s)	812
BstHHI	GCGC	7 cut(s)	7, 655, 785, 941, 994, 1177, 1234
BstKTI	GATC	7 cut(s)	400, 423, 462, 623, 789, 1122, 1255
BstMAI	GTCTC	3 cut(s)	276, 682, 718
BstMBI	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
BstMCI	CGRYCG	2 cut(s)	846, 1063
BstMWI	GCNNNNNNNGC	9 cut(s)	327, 471, 573, 693, 936, 1059, 1172, 1201, 1371
BstNI	CCWGG	3 cut(s)	134, 674, 710
BstPAI	GACNNNNGTC	1 cut(s)	1439
BstSCI	CCNGG	8 cut(s)	132, 390, 455, 507, 600, 672, 708, 1043
BstSFI	CTRYAG	3 cut(s)	298, 377, 1154
BstSLI	GKGCMC	1 cut(s)	1367
BstV1I	GCAGC	4 cut(s)	206, 984, 1140, 1438
BstX2I	RGATCY	3 cut(s)	397, 420, 620
BstXI	CCANNNNNNTGG	1 cut(s)	802
BstYI	RGATCY	3 cut(s)	397, 420, 620
BstZI	CGGCCG	2 cut(s)	843, 1060
BsuI	GTATCC	1 cut(s)	529
BsuRI	GGCC	6 cut(s)	137, 338, 813, 845, 1062, 1166
BtgI	CCRYGG	2 cut(s)	231, 1218
BtgZI	GCGATG	2 cut(s)	781, 973
BtsCI	GGATG	1 cut(s)	812
BtsI	GCAGTG	1 cut(s)	550
BtsIMutI	CAGTG	2 cut(s)	102, 550
Cac8I	GCNNGC	7 cut(s)	328, 569, 594, 638, 685, 1108, 1274
CfoI	GCGC	7 cut(s)	7, 655, 785, 941, 994, 1177, 1234
Cfr10I	RCCGGY	3 cut(s)	119, 539, 1106
Cfr13I	GGNCC	4 cut(s)	181, 310, 337, 1279
Cfr42I	CCGCGG	1 cut(s)	1221
CseI	GACGC	7 cut(s)	481, 487, 659, 930, 1042, 1193, 1456
CsiI	ACCWGGT	1 cut(s)	708
Csp6I	GTAC	4 cut(s)	481, 733, 870, 913
CviAII	CATG	3 cut(s)	409, 526, 645
CviQI	GTAC	4 cut(s)	481, 733, 870, 913
DdeI	CTNAG	3 cut(s)	40, 128, 198
DpnI	GATC	7 cut(s)	399, 422, 461, 622, 788, 1121, 1254
DpnII	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
DraIII	CACNNNGTG	1 cut(s)	977
DriI	GACNNNNNGTC	1 cut(s)	301
EaeI	YGGCCR	3 cut(s)	811, 843, 1060
EagI	CGGCCG	2 cut(s)	843, 1060
Eam1104I	CTCTTC	1 cut(s)	1483
Eam1105I	GACNNNNNGTC	1 cut(s)	301
EarI	CTCTTC	1 cut(s)	1483
EciI	GGCGGA	4 cut(s)	410, 623, 670, 1068
EclXI	CGGCCG	2 cut(s)	843, 1060
Eco147I	AGGCCT	1 cut(s)	1166
Eco24I	GRGCYC	1 cut(s)	408
Eco31I	GGTCTC	2 cut(s)	682, 718
Eco47I	GGWCC	3 cut(s)	181, 310, 1279
Eco52I	CGGCCG	2 cut(s)	843, 1060
Eco57I	CTGAAG	1 cut(s)	1022
Eco72I	CACGTG	2 cut(s)	1245, 1439
Eco88I	CYCGRG	6 cut(s)	339, 428, 953, 1132, 1258, 1360
EcoNI	CCTNNNNNAGG	1 cut(s)	707
EcoO109I	RGGNCCY	1 cut(s)	1279
EcoRII	CCWGG	3 cut(s)	132, 672, 708
EcoT38I	GRGCYC	1 cut(s)	408
FaeI	CATG	3 cut(s)	412, 529, 648
FaiI	YATR	4 cut(s)	410, 527, 646, 1032
FalI	AAGNNNNNCTT	2 cut(s)	1325, 1357
FaqI	GGGAC	2 cut(s)	1265, 1447
FatI	CATG	3 cut(s)	408, 525, 644
FauI	CCCGC	9 cut(s)	89, 168, 326, 335, 1109, 1213, 1225, 1269, 1336
FblI	GTMKAC	2 cut(s)	345, 1128
FokI	GGATG	1 cut(s)	819
FriOI	GRGCYC	1 cut(s)	408
FspBI	CTAG	1 cut(s)	1269
GlaI	GCGC	7 cut(s)	6, 654, 784, 940, 993, 1176, 1233
GsaI	CCCAGC	2 cut(s)	220, 289
GsuI	CTGGAG	5 cut(s)	236, 350, 422, 656, 919
HaeIII	GGCC	6 cut(s)	137, 338, 813, 845, 1062, 1166
HgaI	GACGC	7 cut(s)	481, 487, 659, 930, 1042, 1193, 1456
HhaI	GCGC	7 cut(s)	7, 655, 785, 941, 994, 1177, 1234
Hin1I	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
Hin1II	CATG	3 cut(s)	412, 529, 648
Hin6I	GCGC	7 cut(s)	5, 653, 783, 939, 992, 1175, 1232
HinP1I	GCGC	7 cut(s)	5, 653, 783, 939, 992, 1175, 1232
HincII	GTYRAC	3 cut(s)	346, 925, 1129
HindII	GTYRAC	3 cut(s)	346, 925, 1129
HindIII	AAGCTT	2 cut(s)	897, 1315
HphI	GGTGA	4 cut(s)	307, 397, 488, 1033
Hpy166II	GTNNAC	8 cut(s)	346, 388, 441, 735, 925, 948, 1129, 1354
Hpy188III	TCNNGA	5 cut(s)	110, 401, 772, 1134, 1260
Hpy8I	GTNNAC	8 cut(s)	346, 388, 441, 735, 925, 948, 1129, 1354
HpyAV	CCTTC	6 cut(s)	46, 163, 640, 894, 1033, 1390
HpyCH4III	ACNGT	6 cut(s)	88, 106, 235, 584, 739, 763
HpyCH4IV	ACGT	9 cut(s)	114, 144, 549, 750, 1244, 1286, 1391, 1419, 1438
HpyCH4V	TGCA	3 cut(s)	379, 412, 1156
HpyF10VI	GCNNNNNNNGC	9 cut(s)	327, 471, 573, 693, 936, 1059, 1172, 1201, 1371
HpyF3I	CTNAG	3 cut(s)	40, 128, 198
HpySE526I	ACGT	9 cut(s)	114, 144, 549, 750, 1244, 1286, 1391, 1419, 1438
Hsp92I	GRCGYC	5 cut(s)	114, 144, 498, 549, 1391
Hsp92II	CATG	3 cut(s)	412, 529, 648
HspAI	GCGC	7 cut(s)	5, 653, 783, 939, 992, 1175, 1232
KflI	GGGWCCC	1 cut(s)	1279
KroI	GCCGGC	1 cut(s)	1106
KroNI	GCCGGC	1 cut(s)	1108
KspI	CCGCGG	1 cut(s)	1221
Kzo9I	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
LmnI	GCTCC	8 cut(s)	261, 369, 403, 564, 581, 668, 1182, 1390
Lsp1109I	GCAGC	4 cut(s)	206, 984, 1140, 1438
LweI	GCATC	1 cut(s)	797
MabI	ACCWGGT	1 cut(s)	708
MaeI	CTAG	1 cut(s)	1269
MaeII	ACGT	9 cut(s)	114, 144, 549, 750, 1244, 1286, 1391, 1419, 1438
MaeIII	GTNAC	6 cut(s)	448, 545, 751, 977, 1247, 1445
MalI	GATC	7 cut(s)	399, 422, 461, 622, 788, 1121, 1254
MbiI	CCGCTC	1 cut(s)	668
MboI	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
MboII	GAAGA	4 cut(s)	16, 43, 1015, 1470
MfeI	CAATTG	1 cut(s)	553
MflI	RGATCY	3 cut(s)	397, 420, 620
MhlI	GDGCHC	2 cut(s)	408, 1367
MluCI	AATT	1 cut(s)	553
MluI	ACGCGT	2 cut(s)	490, 1185
MmeI	TCCRAC	6 cut(s)	448, 513, 603, 1015, 1412, 1450
MroNI	GCCGGC	1 cut(s)	1106
MseI	TTAA	2 cut(s)	894, 1492
MslI	CAYNNNNRTG	1 cut(s)	264
MspA1I	CMGCKG	3 cut(s)	197, 997, 1220
MspR9I	CCNGG	8 cut(s)	134, 392, 457, 509, 602, 674, 710, 1045
MunI	CAATTG	1 cut(s)	553
MvaI	CCWGG	3 cut(s)	134, 674, 710
MwoI	GCNNNNNNNGC	9 cut(s)	327, 471, 573, 693, 936, 1059, 1172, 1201, 1371
NaeI	GCCGGC	1 cut(s)	1108
NciI	CCSGG	5 cut(s)	392, 457, 509, 602, 1045
NdeII	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
NgoMIV	GCCGGC	1 cut(s)	1106
NlaIII	CATG	3 cut(s)	412, 529, 648
NlaIV	GGNNCC	7 cut(s)	405, 560, 622, 1021, 1138, 1280, 1281
NmeAIII	GCCGAG	3 cut(s)	314, 840, 1129
NmuCI	GTSAC	3 cut(s)	545, 751, 977
OliI	CACNNNNGTG	1 cut(s)	264
PaeR7I	CTCGAG	1 cut(s)	953
PceI	AGGCCT	1 cut(s)	1166
PcsI	WCGNNNNNNNCGW	6 cut(s)	747, 908, 927, 1079, 1179, 1236
PdiI	GCCGGC	1 cut(s)	1108
PfeI	GAWTC	3 cut(s)	1075, 1345, 1473
PflFI	GACNNNGTC	2 cut(s)	983, 1393
PfoI	TCCNGGA	1 cut(s)	455
PmaCI	CACGTG	2 cut(s)	1245, 1439
PmlI	CACGTG	2 cut(s)	1245, 1439
Ppu21I	YACGTR	3 cut(s)	751, 1245, 1439
PpuMI	RGGWCCY	1 cut(s)	1279
PshAI	GACNNNNGTC	1 cut(s)	1439
Psp1406I	AACGTT	1 cut(s)	1286
Psp5II	RGGWCCY	1 cut(s)	1279
Psp6I	CCWGG	3 cut(s)	132, 672, 708
PspCI	CACGTG	2 cut(s)	1245, 1439
PspFI	CCCAGC	2 cut(s)	216, 285
PspGI	CCWGG	3 cut(s)	132, 672, 708
PspN4I	GGNNCC	7 cut(s)	405, 560, 622, 1021, 1138, 1280, 1281
PspPI	GGNCC	4 cut(s)	181, 310, 337, 1279
PspPPI	RGGWCCY	1 cut(s)	1279
PspXI	VCTCGAGB	1 cut(s)	953
PstI	CTGCAG	2 cut(s)	381, 1158
PsuI	RGATCY	3 cut(s)	397, 420, 620
PsyI	GACNNNGTC	2 cut(s)	983, 1393
PvuII	CAGCTG	1 cut(s)	197
RsaI	GTAC	4 cut(s)	482, 734, 871, 914
RsaNI	GTAC	4 cut(s)	481, 733, 870, 913
RseI	CAYNNNNRTG	1 cut(s)	264
SacII	CCGCGG	1 cut(s)	1221
SalI	GTCGAC	2 cut(s)	344, 1127
SaqAI	TTAA	2 cut(s)	894, 1492
Sau3AI	GATC	7 cut(s)	397, 420, 459, 620, 786, 1119, 1252
Sau96I	GGNCC	4 cut(s)	181, 310, 337, 1279
ScaI	AGTACT	1 cut(s)	482
ScrFI	CCNGG	8 cut(s)	134, 392, 457, 509, 602, 674, 710, 1045
SduI	GDGCHC	2 cut(s)	408, 1367
SexAI	ACCWGGT	1 cut(s)	708
SfaNI	GCATC	1 cut(s)	797
SfcI	CTRYAG	3 cut(s)	298, 377, 1154
Sfr274I	CTCGAG	1 cut(s)	953
Sfr303I	CCGCGG	1 cut(s)	1221
SgrBI	CCGCGG	1 cut(s)	1221
SinI	GGWCC	3 cut(s)	181, 310, 1279
SlaI	CTCGAG	1 cut(s)	953
SmiMI	CAYNNNNRTG	1 cut(s)	264
SmlI	CTYRAG	2 cut(s)	170, 953
SmoI	CTYRAG	2 cut(s)	170, 953
Sse9I	AATT	1 cut(s)	553
SseBI	AGGCCT	1 cut(s)	1166
SspMI	CTAG	1 cut(s)	1269
StuI	AGGCCT	1 cut(s)	1166
StyD4I	CCNGG	8 cut(s)	132, 390, 455, 507, 600, 672, 708, 1043
TaaI	ACNGT	6 cut(s)	88, 106, 235, 584, 739, 763
TaiI	ACGT	9 cut(s)	117, 147, 552, 753, 1247, 1289, 1394, 1422, 1441
TaqI	TCGA	7 cut(s)	111, 156, 345, 954, 1073, 1128, 1239
TasI	AATT	1 cut(s)	553
TatI	WGTACW	1 cut(s)	480
TauI	GCSGC	9 cut(s)	658, 690, 813, 842, 845, 867, 971, 997, 1062
TfiI	GAWTC	3 cut(s)	1075, 1345, 1473
Tru1I	TTAA	2 cut(s)	894, 1492
Tru9I	TTAA	2 cut(s)	894, 1492
TscAI	CASTG	2 cut(s)	109, 550
TseFI	GTSAC	3 cut(s)	545, 751, 977
TseI	GCWGC	4 cut(s)	194, 997, 1153, 1426
Tsp45I	GTSAC	3 cut(s)	545, 751, 977
TspGWI	ACGGA	4 cut(s)	431, 770, 973, 1175
TspRI	CASTG	2 cut(s)	109, 550
Tth111I	GACNNNGTC	2 cut(s)	983, 1393
VpaK11BI	GGWCC	3 cut(s)	181, 310, 1279
XagI	CCTNNNNNAGG	1 cut(s)	707
XhoI	CTCGAG	1 cut(s)	953
XmiI	GTMKAC	2 cut(s)	345, 1128
XspI	CTAG	1 cut(s)	1269
ZraI	GACGTC	4 cut(s)	115, 145, 550, 1392
ZrmI	AGTACT	1 cut(s)	482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.