Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0014903

Physical Location & Seq

Genomic Coordinates Reverse (-)

5546384 .. 5548901

Gene Structure 2518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG077600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCGCAGAACCCATTTCGCTTCTTCGTCTTAACCTTCTCAGCTCTCATCTTCACTACCCTTTTACCTCCCACACTCTCCCGCACCGTAGTATCAGACACCACTGTTCTCGACGTCGCCGGTTCTCTCAGCCAGGCCCATGACGTCATCTCCTTCGACCCACAAACCCTCAAGCCTTTGGACCACCAAGAAGCAGCTGAGCTACAACCACAAGCCCAAGCCCAGCTCAACTCCTCCTCGGTCTCGTCGCTCACTCTCCAGCTCCACCCCCGTGAGTCTCTCTACACCTCCCAGCACAAGGACTACAGGTCGTTGGTCCGCACCCGCCTTTCCCGCGACTCGGCCCGAGTCGACTCGCTCAACACCAAGCTCCAGTTTGCGCTGCAGGGGGTGAACCGGGCGGATCTGGAGCCCATGCAGACGGGGATCCGACCCGAGGACTTGTCCACTCCGGTTACTTCCGGGACCAGCTTGGGAAGCGGCGAGTACTTCACACGCGTCGGCGTCGGCAACCCGGCGAAGCAGTTTTACATGGTGTTGGATACCGGCAGTGACGTCAATTGGCTCCAATGCCAGCCCTGCTCCGACTGTTACCAGCAAGCCGACCCGGTTTTCAACCCCACCGGATCCTCCACCTTCCGCCAGCTCTCCTGCGATGCGCCGCAATGCTCGGCTCTCCAGGTCTCCGCCTGCCGCAACGGCAAGTGCCTCTACCAGGTCTCCTACGGCGACGGCTCGTACACCGTCGGCGACTACGTGACCGAAACGGTGTCGTTCGGGAACTCCGGCGCGATCAACACCATCGCGTTGGGATGCGGCCACGACAACGAGGGTTTGTTCGTCGCTGCCGCCGGACTGCTCGGACTCGGCGGCGGTTCTCTCTCACTTCCTTCGCAAGTTAAAGCTTCGTCGCTGTCGTACTGCCTCGTCAACCGCGACTCCAGCGCGTCGTCAACACTCGAGTTCAACTCTGCCGCGCCCCGCGACTCCGTCATCGCGCCGCTGCTGAAGAACCGCAAACTCGGAACCTTCTACTATGTCGGACTCACCGGGTTCAGCGTCGGCGGCCGTCCGGTGTCGATTCCTCCGTCGCTTTTTCAGATGGACGAAGCCGGCAACGGCGGGATCATCGTCGACTCTGGAACCGCCATCACTCGGCTGCAGACGGCGGCCTACAACGCGCTCCGCGACGCGTTCAAGCGACTCGCGCCTGACCTGACTCCCGCGGGCAGCTTCGCGCTGTTCGACACGTGTTACGATCTCTCGGGAAAAACTAGCGTGCGGGTCCCAACGGTGTCGTTTCTATTTTCGGGTGGGAAAAGCTTTCCTCTCCCCGCCAAGAACTACTTGATTCCGGTGGACAACTCGGGCACTTTCTGCTTCGCCTTCGCTCCGACGTCGTCGGCTCTGTCCATCATCGGAAACGTCCAGCAGCAAGGGACACGTGTCAGTTACGACTTGGCGAACAATCGCGTCGGATTCTCTCCAAATAAGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0010033 GO:0010035 GO:0012505 GO:0016787 GO:0019538 GO:0030163 GO:0033993 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0070001 GO:0070011 GO:0071704 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

499

Amino Acids

53.22

Weight (kDa)

6.22

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	162 - 295	7.8e-10	Eukaryotic aspartyl protease
TAXi_N	PF14543	163 - 322	3.5e-46	Xylanase inhibitor N-terminal
TAXi_C	PF14541	345 - 495	1.1e-36	Xylanase inhibitor C-terminal
Asp	PF00026	375 - 496	2.1e-08	Eukaryotic aspartyl protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18490
fragaria_vesca	FvH4_5g12520
malus_domestica	MD14G1223600.v1.1 MD14G1223700.v1.1
prunus_persica	Prupe.5G218800_v2.0.a1
pyrus_communis	pycom06g18990 pycom14g18490
rosa_chinensis	RchiOBHm_Chr7g0184841
rosa_laevigata	RLG00000004950
rosa_roxburghii	Rroxscaffold_3G00269340
rosa_rugosa	Rorug06G0465300
rosa_samantha	Rh7AG077600 Rh7BG069700 Rh7CG070500 Rh7DG069900
rosa_wichuraiana	Rw7G005780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	4 cut(s)	117, 147, 558, 1400
AccI	GTMKAC	2 cut(s)	351, 1134
AclWI	GGATC	6 cut(s)	411, 421, 434, 621, 634, 1133
AcoI	YGGCCR	2 cut(s)	817, 1066
AcuI	CTGAAG	1 cut(s)	1028
AcvI	CACGTG	2 cut(s)	1251, 1445
AcyI	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
AfaI	GTAC	3 cut(s)	488, 740, 920
AfiI	CCNNNNNNNGG	5 cut(s)	298, 340, 436, 715, 1155
AflIII	ACRYGT	6 cut(s)	496, 1191, 1248, 1250, 1442, 1444
AgsI	TTSAA	3 cut(s)	616, 967, 1198
AhdI	GACNNNNNGTC	1 cut(s)	307
AjnI	CCWGG	3 cut(s)	132, 678, 714
AleI	CACNNNNGTG	1 cut(s)	270
Alw26I	GTCTC	4 cut(s)	247, 282, 688, 724
AlwI	GGATC	6 cut(s)	411, 421, 434, 621, 634, 1133
Ama87I	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
AoxI	GGCC	5 cut(s)	135, 342, 817, 1066, 1170
ApeKI	GCWGC	7 cut(s)	194, 382, 845, 1003, 1159, 1230, 1432
AspS9I	GGNCC	6 cut(s)	136, 181, 316, 343, 465, 1285
AsuC2I	CCSGG	5 cut(s)	398, 463, 515, 608, 1051
AsuHPI	GGTGA	2 cut(s)	403, 1039
AvaI	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
AvaII	GGWCC	4 cut(s)	181, 316, 465, 1285
BaeGI	GKGCMC	1 cut(s)	1373
BaeI	ACNNNNGTAYC	2 cut(s)	75, 108
BamHI	GGATCC	2 cut(s)	426, 626
BanII	GRGCYC	1 cut(s)	414
BarI	GAAGNNNNNNTAC	2 cut(s)	512, 544
BbrPI	CACGTG	2 cut(s)	1251, 1445
BbvI	GCAGC	7 cut(s)	206, 369, 832, 990, 1146, 1242, 1444
BccI	CCATC	4 cut(s)	809, 1096, 1157, 1421
BceAI	ACGGC	6 cut(s)	715, 742, 748, 1053, 1135, 1182
BciT130I	CCWGG	3 cut(s)	134, 680, 716
BciVI	GTATCC	1 cut(s)	535
BcnI	CCSGG	5 cut(s)	398, 463, 515, 608, 1051
BcoDI	GTCTC	4 cut(s)	247, 282, 688, 724
BfaI	CTAG	1 cut(s)	1275
BfmI	CTRYAG	3 cut(s)	304, 383, 1160
BfuI	GTATCC	1 cut(s)	535
BglI	GCCNNNNNGGC	1 cut(s)	699
BlpI	GCTNAGC	1 cut(s)	198
BmcAI	AGTACT	1 cut(s)	488
Bme1390I	CCNGG	8 cut(s)	134, 398, 463, 515, 608, 680, 716, 1051
Bme18I	GGWCC	4 cut(s)	181, 316, 465, 1285
BmeRI	GACNNNNNGTC	1 cut(s)	307
BmeT110I	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
BmgT120I	GGNCC	6 cut(s)	136, 181, 316, 343, 465, 1285
BmiI	GGNNCC	9 cut(s)	411, 428, 466, 566, 628, 1027, 1144, 1286, 1287
BmrFI	CCNGG	8 cut(s)	134, 398, 463, 515, 608, 680, 716, 1051
BmsI	GCATC	2 cut(s)	646, 803
BoxI	GACNNNNGTC	1 cut(s)	1445
BplI	GAGNNNNNCTC	2 cut(s)	953, 985
BpmI	CTGGAG	5 cut(s)	242, 356, 428, 662, 925
Bpu1102I	GCTNAGC	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	5 cut(s)	398, 463, 515, 608, 1051
BsaAI	YACGTR	3 cut(s)	757, 1251, 1445
BsaHI	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
BsaI	GGTCTC	3 cut(s)	247, 688, 724
BsaJI	CCNNGG	3 cut(s)	237, 435, 1224
BsaWI	WCCGGW	4 cut(s)	451, 623, 1072, 1354
BsaXI	ACNNNNNCTCC	6 cut(s)	134, 164, 704, 734, 923, 953
Bsc4I	CCNNNNNNNGG	5 cut(s)	298, 340, 436, 715, 1155
Bse118I	RCCGGY	3 cut(s)	119, 545, 1112
Bse1I	ACTGG	1 cut(s)	373
Bse3DI	GCAATG	1 cut(s)	671
BseBI	CCWGG	3 cut(s)	134, 680, 716
BseDI	CCNNGG	3 cut(s)	237, 435, 1224
BseGI	GGATG	1 cut(s)	818
BseLI	CCNNNNNNNGG	5 cut(s)	298, 340, 436, 715, 1155
BseMI	GCAATG	1 cut(s)	671
BseMII	CTCAG	3 cut(s)	54, 142, 189
BseNI	ACTGG	1 cut(s)	373
BseRI	GAGGAG	2 cut(s)	223, 226
BseSI	GKGCMC	1 cut(s)	1373
BseX3I	CGGCCG	1 cut(s)	1066
BseXI	GCAGC	7 cut(s)	206, 369, 832, 990, 1146, 1242, 1444
BseYI	CCCAGC	2 cut(s)	222, 291
Bsh1285I	CGRYCG	1 cut(s)	1069
BshFI	GGCC	5 cut(s)	137, 344, 819, 1068, 1172
BsiEI	CGRYCG	1 cut(s)	1069
BsiHKCI	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
BslFI	GGGAC	3 cut(s)	478, 1271, 1453
BslI	CCNNNNNNNGG	5 cut(s)	298, 340, 436, 715, 1155
BsmAI	GTCTC	4 cut(s)	247, 282, 688, 724
BsmFI	GGGAC	3 cut(s)	478, 1271, 1453
BsnI	GGCC	5 cut(s)	137, 344, 819, 1068, 1172
Bso31I	GGTCTC	3 cut(s)	247, 688, 724
BsoBI	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
Bsp1286I	GDGCHC	2 cut(s)	414, 1373
Bsp143I	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
Bsp1720I	GCTNAGC	1 cut(s)	198
BspANI	GGCC	5 cut(s)	137, 344, 819, 1068, 1172
BspCNI	CTCAG	3 cut(s)	53, 141, 190
BspLI	GGNNCC	9 cut(s)	411, 428, 466, 566, 628, 1027, 1144, 1286, 1287
BspMAI	CTGCAG	2 cut(s)	387, 1164
BspPI	GGATC	6 cut(s)	411, 421, 434, 621, 634, 1133
BspTNI	GGTCTC	3 cut(s)	247, 688, 724
BsrDI	GCAATG	1 cut(s)	671
BsrFI	RCCGGY	3 cut(s)	119, 545, 1112
BsrI	ACTGG	1 cut(s)	373
BssAI	RCCGGY	3 cut(s)	119, 545, 1112
BssECI	CCNNGG	3 cut(s)	237, 435, 1224
BssMI	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
BssNI	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
Bst2UI	CCWGG	3 cut(s)	134, 680, 716
Bst4CI	ACNGT	6 cut(s)	88, 106, 590, 745, 769, 1294
BstACI	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
BstAPI	GCANNNNNTGC	1 cut(s)	1377
BstBAI	YACGTR	3 cut(s)	757, 1251, 1445
BstC8I	GCNNGC	7 cut(s)	575, 600, 644, 691, 1114, 1228, 1280
BstDEI	CTNAG	3 cut(s)	40, 128, 198
BstDSI	CCRYGG	1 cut(s)	1224
BstENI	CCTNNNNNAGG	1 cut(s)	713
BstF5I	GGATG	1 cut(s)	818
BstKTI	GATC	6 cut(s)	406, 429, 629, 795, 1128, 1261
BstMAI	GTCTC	4 cut(s)	247, 282, 688, 724
BstMBI	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
BstMCI	CGRYCG	1 cut(s)	1069
BstMWI	GCNNNNNNNGC	9 cut(s)	333, 477, 579, 699, 942, 1065, 1178, 1207, 1377
BstNI	CCWGG	3 cut(s)	134, 680, 716
BstPAI	GACNNNNGTC	1 cut(s)	1445
BstSCI	CCNGG	8 cut(s)	132, 396, 461, 513, 606, 678, 714, 1049
BstSFI	CTRYAG	3 cut(s)	304, 383, 1160
BstSLI	GKGCMC	1 cut(s)	1373
BstV1I	GCAGC	7 cut(s)	206, 369, 832, 990, 1146, 1242, 1444
BstX2I	RGATCY	3 cut(s)	403, 426, 626
BstXI	CCANNNNNNTGG	1 cut(s)	808
BstYI	RGATCY	3 cut(s)	403, 426, 626
BstZI	CGGCCG	1 cut(s)	1066
BsuI	GTATCC	1 cut(s)	535
BsuRI	GGCC	5 cut(s)	137, 344, 819, 1068, 1172
BtgI	CCRYGG	1 cut(s)	1224
BtgZI	GCGATG	3 cut(s)	669, 787, 979
BtsCI	GGATG	1 cut(s)	818
BtsI	GCAGTG	1 cut(s)	556
BtsIMutI	CAGTG	2 cut(s)	102, 556
Cac8I	GCNNGC	7 cut(s)	575, 600, 644, 691, 1114, 1228, 1280
Cfr10I	RCCGGY	3 cut(s)	119, 545, 1112
Cfr13I	GGNCC	6 cut(s)	136, 181, 316, 343, 465, 1285
Cfr42I	CCGCGG	1 cut(s)	1227
CseI	GACGC	6 cut(s)	487, 493, 936, 1048, 1199, 1462
CsiI	ACCWGGT	1 cut(s)	714
Csp6I	GTAC	3 cut(s)	487, 739, 919
CviAII	CATG	3 cut(s)	140, 415, 532
CviQI	GTAC	3 cut(s)	487, 739, 919
DdeI	CTNAG	3 cut(s)	40, 128, 198
DpnI	GATC	6 cut(s)	405, 428, 628, 794, 1127, 1260
DpnII	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
DriI	GACNNNNNGTC	1 cut(s)	307
EaeI	YGGCCR	2 cut(s)	817, 1066
EagI	CGGCCG	1 cut(s)	1066
Eam1105I	GACNNNNNGTC	1 cut(s)	307
EciI	GGCGGA	3 cut(s)	416, 629, 676
EclXI	CGGCCG	1 cut(s)	1066
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	3 cut(s)	247, 688, 724
Eco47I	GGWCC	4 cut(s)	181, 316, 465, 1285
Eco52I	CGGCCG	1 cut(s)	1066
Eco57I	CTGAAG	1 cut(s)	1028
Eco72I	CACGTG	2 cut(s)	1251, 1445
Eco88I	CYCGRG	5 cut(s)	345, 434, 959, 1264, 1366
EcoNI	CCTNNNNNAGG	1 cut(s)	713
EcoO109I	RGGNCCY	1 cut(s)	1285
EcoRII	CCWGG	3 cut(s)	132, 678, 714
EcoT38I	GRGCYC	1 cut(s)	414
FaeI	CATG	3 cut(s)	143, 418, 535
FaiI	YATR	4 cut(s)	141, 416, 533, 1038
FalI	AAGNNNNNCTT	2 cut(s)	1331, 1363
FaqI	GGGAC	3 cut(s)	478, 1271, 1453
FatI	CATG	3 cut(s)	139, 414, 531
FauI	CCCGC	9 cut(s)	89, 332, 341, 989, 1115, 1219, 1231, 1275, 1342
FblI	GTMKAC	2 cut(s)	351, 1134
FokI	GGATG	1 cut(s)	825
FriOI	GRGCYC	1 cut(s)	414
FspBI	CTAG	1 cut(s)	1275
GsaI	CCCAGC	2 cut(s)	226, 295
GsuI	CTGGAG	5 cut(s)	242, 356, 428, 662, 925
HaeIII	GGCC	5 cut(s)	137, 344, 819, 1068, 1172
HgaI	GACGC	6 cut(s)	487, 493, 936, 1048, 1199, 1462
Hin1I	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
Hin1II	CATG	3 cut(s)	143, 418, 535
HincII	GTYRAC	4 cut(s)	352, 931, 954, 1135
HindII	GTYRAC	4 cut(s)	352, 931, 954, 1135
HindIII	AAGCTT	2 cut(s)	903, 1321
HphI	GGTGA	2 cut(s)	403, 1039
Hpy166II	GTNNAC	8 cut(s)	352, 394, 447, 741, 931, 954, 1135, 1360
Hpy188III	TCNNGA	5 cut(s)	110, 407, 778, 1140, 1266
Hpy8I	GTNNAC	8 cut(s)	352, 394, 447, 741, 931, 954, 1135, 1360
HpyAV	CCTTC	6 cut(s)	46, 163, 646, 900, 1039, 1396
HpyCH4III	ACNGT	6 cut(s)	88, 106, 590, 745, 769, 1294
HpyCH4IV	ACGT	8 cut(s)	114, 144, 555, 756, 1250, 1397, 1425, 1444
HpyCH4V	TGCA	3 cut(s)	385, 418, 1162
HpyF10VI	GCNNNNNNNGC	9 cut(s)	333, 477, 579, 699, 942, 1065, 1178, 1207, 1377
HpyF3I	CTNAG	3 cut(s)	40, 128, 198
HpySE526I	ACGT	8 cut(s)	114, 144, 555, 756, 1250, 1397, 1425, 1444
Hsp92I	GRCGYC	5 cut(s)	114, 144, 504, 555, 1397
Hsp92II	CATG	3 cut(s)	143, 418, 535
KflI	GGGWCCC	1 cut(s)	1285
KroI	GCCGGC	1 cut(s)	1112
KroNI	GCCGGC	1 cut(s)	1114
KspI	CCGCGG	1 cut(s)	1227
Kzo9I	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
LmnI	GCTCC	7 cut(s)	267, 375, 409, 570, 587, 1188, 1396
Lsp1109I	GCAGC	7 cut(s)	206, 369, 832, 990, 1146, 1242, 1444
LweI	GCATC	2 cut(s)	646, 803
MabI	ACCWGGT	1 cut(s)	714
MaeI	CTAG	1 cut(s)	1275
MaeII	ACGT	8 cut(s)	114, 144, 555, 756, 1250, 1397, 1425, 1444
MaeIII	GTNAC	6 cut(s)	454, 551, 590, 757, 1253, 1451
MalI	GATC	6 cut(s)	405, 428, 628, 794, 1127, 1260
MboI	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
MboII	GAAGA	3 cut(s)	16, 43, 1021
MfeI	CAATTG	1 cut(s)	559
MflI	RGATCY	3 cut(s)	403, 426, 626
MhlI	GDGCHC	2 cut(s)	414, 1373
MluCI	AATT	1 cut(s)	559
MluI	ACGCGT	2 cut(s)	496, 1191
MmeI	TCCRAC	6 cut(s)	454, 519, 609, 1021, 1418, 1456
MroNI	GCCGGC	1 cut(s)	1112
MseI	TTAA	3 cut(s)	32, 900, 1498
MslI	CAYNNNNRTG	1 cut(s)	270
MspA1I	CMGCKG	3 cut(s)	197, 1003, 1226
MspR9I	CCNGG	8 cut(s)	134, 398, 463, 515, 608, 680, 716, 1051
MunI	CAATTG	1 cut(s)	559
MvaI	CCWGG	3 cut(s)	134, 680, 716
MwoI	GCNNNNNNNGC	9 cut(s)	333, 477, 579, 699, 942, 1065, 1178, 1207, 1377
NaeI	GCCGGC	1 cut(s)	1114
NciI	CCSGG	5 cut(s)	398, 463, 515, 608, 1051
NdeII	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
NgoMIV	GCCGGC	1 cut(s)	1112
NlaIII	CATG	3 cut(s)	143, 418, 535
NlaIV	GGNNCC	9 cut(s)	411, 428, 466, 566, 628, 1027, 1144, 1286, 1287
NmeAIII	GCCGAG	4 cut(s)	320, 650, 846, 1135
NmuCI	GTSAC	2 cut(s)	551, 757
OliI	CACNNNNGTG	1 cut(s)	270
PaeR7I	CTCGAG	1 cut(s)	959
PcsI	WCGNNNNNNNCGW	6 cut(s)	753, 914, 933, 1085, 1185, 1242
PdiI	GCCGGC	1 cut(s)	1114
PfeI	GAWTC	3 cut(s)	1081, 1351, 1479
PflFI	GACNNNGTC	2 cut(s)	989, 1399
PfoI	TCCNGGA	1 cut(s)	461
PmaCI	CACGTG	2 cut(s)	1251, 1445
PmlI	CACGTG	2 cut(s)	1251, 1445
Ppu21I	YACGTR	3 cut(s)	757, 1251, 1445
PpuMI	RGGWCCY	1 cut(s)	1285
PshAI	GACNNNNGTC	1 cut(s)	1445
Psp5II	RGGWCCY	1 cut(s)	1285
Psp6I	CCWGG	3 cut(s)	132, 678, 714
PspCI	CACGTG	2 cut(s)	1251, 1445
PspFI	CCCAGC	2 cut(s)	222, 291
PspGI	CCWGG	3 cut(s)	132, 678, 714
PspN4I	GGNNCC	9 cut(s)	411, 428, 466, 566, 628, 1027, 1144, 1286, 1287
PspPI	GGNCC	6 cut(s)	136, 181, 316, 343, 465, 1285
PspPPI	RGGWCCY	1 cut(s)	1285
PspXI	VCTCGAGB	1 cut(s)	959
PstI	CTGCAG	2 cut(s)	387, 1164
PsuI	RGATCY	3 cut(s)	403, 426, 626
PsyI	GACNNNGTC	2 cut(s)	989, 1399
PvuII	CAGCTG	1 cut(s)	197
RsaI	GTAC	3 cut(s)	488, 740, 920
RsaNI	GTAC	3 cut(s)	487, 739, 919
RseI	CAYNNNNRTG	1 cut(s)	270
SacII	CCGCGG	1 cut(s)	1227
SalI	GTCGAC	2 cut(s)	350, 1133
SaqAI	TTAA	3 cut(s)	32, 900, 1498
Sau3AI	GATC	6 cut(s)	403, 426, 626, 792, 1125, 1258
Sau96I	GGNCC	6 cut(s)	136, 181, 316, 343, 465, 1285
ScaI	AGTACT	1 cut(s)	488
ScrFI	CCNGG	8 cut(s)	134, 398, 463, 515, 608, 680, 716, 1051
SduI	GDGCHC	2 cut(s)	414, 1373
SexAI	ACCWGGT	1 cut(s)	714
SfaNI	GCATC	2 cut(s)	646, 803
SfcI	CTRYAG	3 cut(s)	304, 383, 1160
Sfr274I	CTCGAG	1 cut(s)	959
Sfr303I	CCGCGG	1 cut(s)	1227
SgrBI	CCGCGG	1 cut(s)	1227
SinI	GGWCC	4 cut(s)	181, 316, 465, 1285
SlaI	CTCGAG	1 cut(s)	959
SmiMI	CAYNNNNRTG	1 cut(s)	270
SmlI	CTYRAG	2 cut(s)	170, 959
SmoI	CTYRAG	2 cut(s)	170, 959
Sse9I	AATT	1 cut(s)	559
SspMI	CTAG	1 cut(s)	1275
StyD4I	CCNGG	8 cut(s)	132, 396, 461, 513, 606, 678, 714, 1049
TaaI	ACNGT	6 cut(s)	88, 106, 590, 745, 769, 1294
TaiI	ACGT	8 cut(s)	117, 147, 558, 759, 1253, 1400, 1428, 1447
TaqI	TCGA	7 cut(s)	111, 156, 351, 960, 1079, 1134, 1245
TaqII	GACCGA	2 cut(s)	229, 776
TasI	AATT	1 cut(s)	559
TatI	WGTACW	1 cut(s)	486
TfiI	GAWTC	3 cut(s)	1081, 1351, 1479
Tru1I	TTAA	3 cut(s)	32, 900, 1498
Tru9I	TTAA	3 cut(s)	32, 900, 1498
TscAI	CASTG	2 cut(s)	109, 556
TseFI	GTSAC	2 cut(s)	551, 757
TseI	GCWGC	7 cut(s)	194, 382, 845, 1003, 1159, 1230, 1432
Tsp45I	GTSAC	2 cut(s)	551, 757
TspGWI	ACGGA	2 cut(s)	979, 1077
TspRI	CASTG	2 cut(s)	109, 556
Tth111I	GACNNNGTC	2 cut(s)	989, 1399
VpaK11BI	GGWCC	4 cut(s)	181, 316, 465, 1285
XagI	CCTNNNNNAGG	1 cut(s)	713
XhoI	CTCGAG	1 cut(s)	959
XmiI	GTMKAC	2 cut(s)	351, 1134
XspI	CTAG	1 cut(s)	1275
ZraI	GACGTC	4 cut(s)	115, 145, 556, 1398
ZrmI	AGTACT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.