Rroxscaffold_4G00299650

Produces ATP from ADP in the presence of a proton gradient across the membrane

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
19602139 .. 19607421
5283 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_4G00299650.1

Sequence Viewer

Length: 207 bp
ATGGATGGGGCCGAAGGGCTCGTTAGAGGTCAACGAGTCCTCAACACGGGCTCTCCTATCCTTGTGCCTGTTGGAAGAGCAACCCTGGGCCGAATTATGAATGTTATCGGAGAGCCTATTGATCGCGAGGGCCTTCTACTATTGCGCTCCGTCAAAGCAATGGAGCGTCATACTCGGACAACTCCGCTAGCCTCCAAATCGGCATAA
Functional Annotation

Protein Analysis

68

Amino Acids

7.28

Weight (kDa)

11.21

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021210)

Species Orthologous Gene IDs
malus_domestica MD11G1295100.v1.1
rosa_chinensis RchiOBHm_Chr7g0228781 RchiOBHm_Chr7g0228791
rosa_roxburghii Rroxscaffold_4G00299650
rosa_samantha Rh7DG399500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 126
AciI CCGC 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 46
AjnI CCWGG 1 cut(s) 84
AoxI GGCC 3 cut(s) 9, 88, 130
AspLEI GCGC 1 cut(s) 147
AspS9I GGNCC 3 cut(s) 9, 88, 130
AsuNHI GCTAGC 1 cut(s) 187
BanII GRGCYC 2 cut(s) 21, 53
BciT130I CCWGG 1 cut(s) 86
BfaI CTAG 1 cut(s) 188
Bme1390I CCNGG 1 cut(s) 86
BmgT120I GGNCC 3 cut(s) 9, 88, 130
BmiI GGNNCC 1 cut(s) 10
BmrFI CCNGG 1 cut(s) 86
BmtI GCTAGC 1 cut(s) 191
BsaJI CCNNGG 2 cut(s) 84, 85
BsaXI ACNNNNNCTCC 2 cut(s) 37, 67
Bsc4I CCNNNNNNNGG 1 cut(s) 46
Bse3DI GCAATG 1 cut(s) 165
BseBI CCWGG 1 cut(s) 86
BseDI CCNNGG 2 cut(s) 84, 85
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 1 cut(s) 46
BseMI GCAATG 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 3 cut(s) 11, 90, 132
BslI CCNNNNNNNGG 1 cut(s) 46
BsnI GGCC 3 cut(s) 11, 90, 132
Bsp1286I GDGCHC 2 cut(s) 21, 53
Bsp143I GATC 1 cut(s) 121
Bsp68I TCGCGA 1 cut(s) 126
BspACI CCGC 1 cut(s) 185
BspANI GGCC 3 cut(s) 11, 90, 132
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 1 cut(s) 10
BspOI GCTAGC 1 cut(s) 191
BspQI GCTCTTC 1 cut(s) 70
BsrDI GCAATG 1 cut(s) 165
BssECI CCNNGG 2 cut(s) 84, 85
BssMI GATC 1 cut(s) 121
Bst2UI CCWGG 1 cut(s) 86
Bst6I CTCTTC 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 189
BstF5I GGATG 1 cut(s) 10
BstFNI CGCG 1 cut(s) 126
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 1 cut(s) 124
BstMBI GATC 1 cut(s) 121
BstNI CCWGG 1 cut(s) 86
BstSCI CCNGG 1 cut(s) 84
BstUI CGCG 1 cut(s) 126
BsuRI GGCC 3 cut(s) 11, 90, 132
BtsCI GGATG 1 cut(s) 10
BtuMI TCGCGA 1 cut(s) 126
Cac8I GCNNGC 1 cut(s) 189
CfoI GCGC 1 cut(s) 147
Cfr13I GGNCC 3 cut(s) 9, 88, 130
CseI GACGC 1 cut(s) 155
CviJI RGCY 7 cut(s) 11, 19, 51, 90, 115, 132, 191
CviKI_1 RGCY 7 cut(s) 11, 19, 51, 90, 115, 132, 191
DpnI GATC 1 cut(s) 123
DpnII GATC 1 cut(s) 121
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Eco24I GRGCYC 2 cut(s) 21, 53
EcoO109I RGGNCCY 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 84
EcoT38I GRGCYC 2 cut(s) 21, 53
FaiI YATR 3 cut(s) 98, 171, 205
FokI GGATG 1 cut(s) 17
FriOI GRGCYC 2 cut(s) 21, 53
FspBI CTAG 1 cut(s) 188
GlaI GCGC 1 cut(s) 146
HaeIII GGCC 3 cut(s) 11, 90, 132
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 147
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HincII GTYRAC 1 cut(s) 32
HindII GTYRAC 1 cut(s) 32
HinfI GANTC 1 cut(s) 36
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 2 cut(s) 110, 177
Hpy188III TCNNGA 1 cut(s) 125
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 2 cut(s) 8, 143
HspAI GCGC 1 cut(s) 145
Kzo9I GATC 1 cut(s) 121
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 2 cut(s) 152, 163
LpnPI CCDG 3 cut(s) 71, 81, 98
MaeI CTAG 1 cut(s) 188
MalI GATC 1 cut(s) 123
MboI GATC 1 cut(s) 121
MboII GAAGA 1 cut(s) 87
MhlI GDGCHC 2 cut(s) 21, 53
MluCI AATT 1 cut(s) 93
MlyI GAGTC 1 cut(s) 45
MmeI TCCRAC 1 cut(s) 52
MnlI CCTC 4 cut(s) 20, 50, 121, 202
MspR9I CCNGG 1 cut(s) 86
MvaI CCWGG 1 cut(s) 86
MvnI CGCG 1 cut(s) 126
NdeII GATC 1 cut(s) 121
NheI GCTAGC 1 cut(s) 187
NlaIV GGNNCC 1 cut(s) 10
NruI TCGCGA 1 cut(s) 126
PasI CCCWGGG 1 cut(s) 85
PciSI GCTCTTC 1 cut(s) 70
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
Psp6I CCWGG 1 cut(s) 84
PspGI CCWGG 1 cut(s) 84
PspN4I GGNNCC 1 cut(s) 10
PspPI GGNCC 3 cut(s) 9, 88, 130
RruI TCGCGA 1 cut(s) 126
SapI GCTCTTC 1 cut(s) 70
Sau3AI GATC 1 cut(s) 121
Sau96I GGNCC 3 cut(s) 9, 88, 130
SchI GAGTC 1 cut(s) 45
ScrFI CCNGG 1 cut(s) 86
SduI GDGCHC 2 cut(s) 21, 53
SetI ASST 1 cut(s) 31
Sse9I AATT 1 cut(s) 93
SsiI CCGC 1 cut(s) 185
SspMI CTAG 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 84
TasI AATT 1 cut(s) 93
TspDTI ATGAA 1 cut(s) 113
TspGWI ACGGA 1 cut(s) 139
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.