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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024866 |
| rosa_multiflora | Rmu_sc0000353.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00247700 Rroxscaffold_4G00304020 |
| rosa_rugosa | Rorug06G0014100 |
| rosa_samantha | Rh7CG459400 Rh7CG459500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 19 |
| AatII | GACGTC | 1 cut(s) | 274 |
| AciI | CCGC | 3 cut(s) | 5, 17, 124 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcyI | GRCGYC | 1 cut(s) | 271 |
| AgsI | TTSAA | 2 cut(s) | 68, 245 |
| AluBI | AGCT | 4 cut(s) | 146, 152, 205, 222 |
| AluI | AGCT | 4 cut(s) | 146, 152, 205, 222 |
| Alw26I | GTCTC | 1 cut(s) | 225 |
| AlwI | GGATC | 1 cut(s) | 185 |
| Ama87I | CYCGRG | 1 cut(s) | 226 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 224, 256 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| AsuII | TTCGAA | 2 cut(s) | 200, 291 |
| AvaI | CYCGRG | 1 cut(s) | 226 |
| BbsI | GAAGAC | 1 cut(s) | 75 |
| BccI | CCATC | 1 cut(s) | 260 |
| BceAI | ACGGC | 1 cut(s) | 84 |
| BcoDI | GTCTC | 1 cut(s) | 225 |
| BfaI | CTAG | 2 cut(s) | 149, 188 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| BmeT110I | CYCGRG | 1 cut(s) | 226 |
| BpiI | GAAGAC | 1 cut(s) | 75 |
| Bpu14I | TTCGAA | 2 cut(s) | 200, 291 |
| BsaHI | GRCGYC | 1 cut(s) | 271 |
| BsaI | GGTCTC | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 1 cut(s) | 59 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 206, 236 |
| Bse118I | RCCGGY | 1 cut(s) | 165 |
| BseDI | CCNNGG | 1 cut(s) | 59 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseRI | GAGGAG | 1 cut(s) | 214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 226 |
| BsiSI | CCGG | 2 cut(s) | 166, 208 |
| BsmAI | GTCTC | 1 cut(s) | 225 |
| Bso31I | GGTCTC | 1 cut(s) | 225 |
| BsoBI | CYCGRG | 1 cut(s) | 226 |
| Bsp119I | TTCGAA | 2 cut(s) | 200, 291 |
| Bsp143I | GATC | 2 cut(s) | 159, 190 |
| BspACI | CCGC | 3 cut(s) | 5, 17, 124 |
| BspHI | TCATGA | 1 cut(s) | 93 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspT104I | TTCGAA | 2 cut(s) | 200, 291 |
| BspTNI | GGTCTC | 1 cut(s) | 225 |
| BsrFI | RCCGGY | 1 cut(s) | 165 |
| BssAI | RCCGGY | 1 cut(s) | 165 |
| BssECI | CCNNGG | 1 cut(s) | 59 |
| BssMI | GATC | 2 cut(s) | 159, 190 |
| BssNI | GRCGYC | 1 cut(s) | 271 |
| Bst4CI | ACNGT | 1 cut(s) | 82 |
| BstACI | GRCGYC | 1 cut(s) | 271 |
| BstBI | TTCGAA | 2 cut(s) | 200, 291 |
| BstC8I | GCNNGC | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 2 cut(s) | 162, 193 |
| BstMAI | GTCTC | 1 cut(s) | 225 |
| BstMBI | GATC | 2 cut(s) | 159, 190 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 112 |
| BstV2I | GAAGAC | 1 cut(s) | 75 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| Cac8I | GCNNGC | 1 cut(s) | 144 |
| CciI | TCATGA | 1 cut(s) | 93 |
| Cfr10I | RCCGGY | 1 cut(s) | 165 |
| CseI | GACGC | 1 cut(s) | 62 |
| CviAII | CATG | 1 cut(s) | 94 |
| CviJI | RGCY | 9 cut(s) | 64, 99, 115, 146, 152, 169, 205, 222, 278 |
| CviKI_1 | RGCY | 9 cut(s) | 64, 99, 115, 146, 152, 169, 205, 222, 278 |
| DpnI | GATC | 2 cut(s) | 161, 192 |
| DpnII | GATC | 2 cut(s) | 159, 190 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 19 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 19 |
| Eco31I | GGTCTC | 1 cut(s) | 225 |
| Eco88I | CYCGRG | 1 cut(s) | 226 |
| FaeI | CATG | 1 cut(s) | 97 |
| FaiI | YATR | 5 cut(s) | 33, 95, 285, 287, 297 |
| FatI | CATG | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 1 cut(s) | 71 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| FspBI | CTAG | 2 cut(s) | 149, 188 |
| GluI | GCNGC | 1 cut(s) | 6 |
| HapII | CCGG | 2 cut(s) | 166, 208 |
| HgaI | GACGC | 1 cut(s) | 62 |
| Hin1I | GRCGYC | 1 cut(s) | 271 |
| Hin1II | CATG | 1 cut(s) | 97 |
| HpaII | CCGG | 2 cut(s) | 166, 208 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy188I | TCNGA | 2 cut(s) | 60, 195 |
| Hpy188III | TCNNGA | 3 cut(s) | 94, 188, 228 |
| Hpy99I | CGWCG | 3 cut(s) | 13, 53, 56 |
| HpyAV | CCTTC | 1 cut(s) | 194 |
| HpyCH4III | ACNGT | 1 cut(s) | 82 |
| HpyCH4IV | ACGT | 2 cut(s) | 255, 271 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 112 |
| HpySE526I | ACGT | 2 cut(s) | 255, 271 |
| Hsp92I | GRCGYC | 1 cut(s) | 271 |
| Hsp92II | CATG | 1 cut(s) | 97 |
| Kzo9I | GATC | 2 cut(s) | 159, 190 |
| LmnI | GCTCC | 4 cut(s) | 61, 157, 210, 227 |
| LpnPI | CCDG | 2 cut(s) | 179, 221 |
| MaeI | CTAG | 2 cut(s) | 149, 188 |
| MaeII | ACGT | 2 cut(s) | 255, 271 |
| MaeIII | GTNAC | 2 cut(s) | 119, 172 |
| MalI | GATC | 2 cut(s) | 161, 192 |
| MboI | GATC | 2 cut(s) | 159, 190 |
| MboII | GAAGA | 1 cut(s) | 80 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MnlI | CCTC | 5 cut(s) | 30, 54, 98, 138, 235 |
| MspI | CCGG | 2 cut(s) | 166, 208 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 112 |
| NdeII | GATC | 2 cut(s) | 159, 190 |
| NlaIII | CATG | 1 cut(s) | 97 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| NspV | TTCGAA | 2 cut(s) | 200, 291 |
| PaeR7I | CTCGAG | 1 cut(s) | 226 |
| PagI | TCATGA | 1 cut(s) | 93 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 2 cut(s) | 159, 190 |
| SetI | ASST | 7 cut(s) | 41, 148, 154, 207, 224, 258, 274 |
| Sfr274I | CTCGAG | 1 cut(s) | 226 |
| SfuI | TTCGAA | 2 cut(s) | 200, 291 |
| SlaI | CTCGAG | 1 cut(s) | 226 |
| SmlI | CTYRAG | 1 cut(s) | 226 |
| SmoI | CTYRAG | 1 cut(s) | 226 |
| SsiI | CCGC | 3 cut(s) | 5, 17, 124 |
| SspMI | CTAG | 2 cut(s) | 149, 188 |
| TaaI | ACNGT | 1 cut(s) | 82 |
| TaiI | ACGT | 2 cut(s) | 258, 274 |
| TaqI | TCGA | 5 cut(s) | 23, 48, 200, 227, 291 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 1 cut(s) | 272 |
| XbaI | TCTAGA | 1 cut(s) | 187 |
| XhoI | CTCGAG | 1 cut(s) | 226 |
| XspI | CTAG | 2 cut(s) | 149, 188 |
| ZraI | GACGTC | 1 cut(s) | 272 |