Rh7CG459500

posttranslational protein targeting to membrane, translocation

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
60698329 .. 60698538
210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG459500.1

Sequence Viewer

Length: 210 bp
ATGGACGGCGGCGACGGCTTTGATGTTGGAAAAAACATGCTGAGGTTCTACATCGATGACTCTCCAGGCTTGAAGATCACGCTCACCGTCATCCTTGTCATGAGCCATCTGCTTCATCGGCTTCGTCACCACTCTCCACGTGTTCGGCAAGCTCTATCTCCACCGATCTACCGGCTCGTAACACGAATCGTTCTAGATCCAGAGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000060 GO:0003674 GO:0005085 GO:0005086 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005784 GO:0005789 GO:0005791 GO:0005829 GO:0006508 GO:0006511 GO:0006605 GO:0006606 GO:0006612 GO:0006613 GO:0006614 GO:0006616 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008104 GO:0008150 GO:0008152 GO:0008320 GO:0008565 GO:0009056 GO:0009057 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010506 GO:0010507 GO:0012505 GO:0015031 GO:0015399 GO:0015405 GO:0015450 GO:0015833 GO:0016020 GO:0016021 GO:0017038 GO:0019222 GO:0019538 GO:0019838 GO:0019899 GO:0019941 GO:0022804 GO:0022857 GO:0022884 GO:0030163 GO:0030433 GO:0030867 GO:0030970 GO:0031090 GO:0031204 GO:0031205 GO:0031224 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031984 GO:0032527 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042562 GO:0042886 GO:0042887 GO:0043021 GO:0043022 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046907 GO:0048408 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0065009 GO:0070727 GO:0070972 GO:0071256 GO:0071261 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098588 GO:0098772 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1903513 GO:1904680
Pfam Domains
Protein Families

Protein Analysis

69

Amino Acids

7.87

Weight (kDa)

9.51

Isoelectric Point (pI)

57.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0020033)

Species Orthologous Gene IDs
rosa_laevigata RLG00000024866
rosa_multiflora Rmu_sc0000353.1_g000006
rosa_roxburghii Rroxscaffold_3G00247700 Rroxscaffold_4G00304020
rosa_rugosa Rorug06G0014100
rosa_samantha Rh7CG459400 Rh7CG459500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 9
AclWI GGATC 1 cut(s) 191
AcvI CACGTG 1 cut(s) 140
AflIII ACRYGT 1 cut(s) 139
AgsI TTSAA 1 cut(s) 73
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 1 cut(s) 152
AluI AGCT 1 cut(s) 152
AlwI GGATC 1 cut(s) 191
AsuHPI GGTGA 2 cut(s) 76, 119
BbrPI CACGTG 1 cut(s) 140
BbvCI CCTCAGC 1 cut(s) 41
BccI CCATC 1 cut(s) 114
BceAI ACGGC 2 cut(s) 22, 31
BciT130I CCWGG 1 cut(s) 66
BfaI CTAG 1 cut(s) 194
BisI GCNGC 1 cut(s) 10
BlsI GCNGC 1 cut(s) 11
Bme1390I CCNGG 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 66
BpmI CTGGAG 1 cut(s) 48
Bpu10I CCTNAGC 1 cut(s) 41
Bsa29I ATCGAT 1 cut(s) 54
BsaAI YACGTR 1 cut(s) 140
Bse118I RCCGGY 1 cut(s) 171
BseBI CCWGG 1 cut(s) 66
BseCI ATCGAT 1 cut(s) 54
BseGI GGATG 1 cut(s) 90
BseMII CTCAG 1 cut(s) 32
BshVI ATCGAT 1 cut(s) 54
BsiSI CCGG 1 cut(s) 172
Bsp143I GATC 3 cut(s) 75, 165, 196
BspACI CCGC 1 cut(s) 9
BspCNI CTCAG 1 cut(s) 33
BspDI ATCGAT 1 cut(s) 54
BspHI TCATGA 1 cut(s) 99
BspPI GGATC 1 cut(s) 191
BsrFI RCCGGY 1 cut(s) 171
BssAI RCCGGY 1 cut(s) 171
BssMI GATC 3 cut(s) 75, 165, 196
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 1 cut(s) 88
BstBAI YACGTR 1 cut(s) 140
BstC8I GCNNGC 1 cut(s) 150
BstDEI CTNAG 1 cut(s) 41
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 3 cut(s) 78, 168, 199
BstMBI GATC 3 cut(s) 75, 165, 196
BstMWI GCNNNNNNNGC 2 cut(s) 15, 118
BstNI CCWGG 1 cut(s) 66
BstNSI RCATGY 1 cut(s) 40
BstSCI CCNGG 1 cut(s) 64
BstX2I RGATCY 1 cut(s) 196
BstYI RGATCY 1 cut(s) 196
Bsu15I ATCGAT 1 cut(s) 54
BsuTUI ATCGAT 1 cut(s) 54
BtsCI GGATG 1 cut(s) 90
Cac8I GCNNGC 1 cut(s) 150
CciI TCATGA 1 cut(s) 99
Cfr10I RCCGGY 1 cut(s) 171
ClaI ATCGAT 1 cut(s) 54
CviAII CATG 2 cut(s) 37, 100
CviJI RGCY 6 cut(s) 18, 69, 105, 121, 152, 175
CviKI_1 RGCY 6 cut(s) 18, 69, 105, 121, 152, 175
DdeI CTNAG 1 cut(s) 41
DpnI GATC 3 cut(s) 77, 167, 198
DpnII GATC 3 cut(s) 75, 165, 196
Eco72I CACGTG 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 64
FaeI CATG 2 cut(s) 40, 103
FaiI YATR 2 cut(s) 38, 101
FatI CATG 2 cut(s) 36, 99
Fnu4HI GCNGC 1 cut(s) 10
FokI GGATG 1 cut(s) 77
Fsp4HI GCNGC 1 cut(s) 10
FspBI CTAG 1 cut(s) 194
GluI GCNGC 1 cut(s) 10
GsuI CTGGAG 1 cut(s) 48
HapII CCGG 1 cut(s) 172
Hin1II CATG 2 cut(s) 40, 103
HinfI GANTC 3 cut(s) 59, 186, 203
HpaII CCGG 1 cut(s) 172
HphI GGTGA 2 cut(s) 76, 119
Hpy188III TCNNGA 4 cut(s) 100, 194, 200, 207
Hpy99I CGWCG 1 cut(s) 17
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4IV ACGT 1 cut(s) 139
HpyF10VI GCNNNNNNNGC 2 cut(s) 15, 118
HpyF3I CTNAG 1 cut(s) 41
HpySE526I ACGT 1 cut(s) 139
Hsp92II CATG 2 cut(s) 40, 103
Kzo9I GATC 3 cut(s) 75, 165, 196
LpnPI CCDG 3 cut(s) 51, 78, 185
MaeI CTAG 1 cut(s) 194
MaeII ACGT 1 cut(s) 139
MaeIII GTNAC 2 cut(s) 125, 178
MalI GATC 3 cut(s) 77, 167, 198
MboI GATC 3 cut(s) 75, 165, 196
MboII GAAGA 1 cut(s) 85
MflI RGATCY 1 cut(s) 196
MlyI GAGTC 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 7
MnlI CCTC 1 cut(s) 36
MspI CCGG 1 cut(s) 172
MspR9I CCNGG 1 cut(s) 66
MvaI CCWGG 1 cut(s) 66
MwoI GCNNNNNNNGC 2 cut(s) 15, 118
NdeII GATC 3 cut(s) 75, 165, 196
NlaIII CATG 2 cut(s) 40, 103
NmuCI GTSAC 1 cut(s) 125
NspI RCATGY 1 cut(s) 40
PagI TCATGA 1 cut(s) 99
PfeI GAWTC 1 cut(s) 186
PkrI GCNGC 1 cut(s) 11
PleI GAGTC 1 cut(s) 53
PmaCI CACGTG 1 cut(s) 140
PmlI CACGTG 1 cut(s) 140
PpsI GAGTC 1 cut(s) 53
Ppu21I YACGTR 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 64
PspCI CACGTG 1 cut(s) 140
PspGI CCWGG 1 cut(s) 64
PsuI RGATCY 1 cut(s) 196
SatI GCNGC 1 cut(s) 10
Sau3AI GATC 3 cut(s) 75, 165, 196
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 1 cut(s) 66
SetI ASST 3 cut(s) 47, 142, 154
SsiI CCGC 1 cut(s) 9
SspMI CTAG 1 cut(s) 194
StyD4I CCNGG 1 cut(s) 64
TaaI ACNGT 1 cut(s) 88
TaiI ACGT 1 cut(s) 142
TaqI TCGA 1 cut(s) 54
TauI GCSGC 1 cut(s) 12
TfiI GAWTC 1 cut(s) 186
TseFI GTSAC 1 cut(s) 125
Tsp45I GTSAC 1 cut(s) 125
TspDTI ATGAA 1 cut(s) 104
XbaI TCTAGA 1 cut(s) 193
XceI RCATGY 1 cut(s) 40
XspI CTAG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.