Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006981

Physical Location & Seq

Genomic Coordinates Reverse (-)

16337194 .. 16344238

Gene Structure 7045 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00345810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGGGGGCACGGACAAGGCTATCAGCCTTGAGGAGATCAAGAACGAGACTGTTGATCTGGATTCCCATTGAGGAAGTGTTTGGGCAGCTGAAATGTTCCAGAGAAGGTCTAAGCGGGGCGGAAGGAGCCCAGAGGCTCGAGATTTTTGGTCCCAACAAGCTAGAAGAGAAGAAGGTGCTTAGAGATGGAAAGTGGTCTGAGGAGGATGCTTCCATCCTGGTTCCAGGAGATATCATTAGCATCAAGTTGGGAGACATTGTCCCAGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTAAAGATTGATCAATCTGCCCTTACGGGAGAATCACTTCCAGTGACCAAGCATCCAGGAGATGAAGTTTTCTCTGGTTCAACTTGCAAACAAGGTGAAATCGAAGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCAGCTCATCTTGTAGACAGCACCAACCAAGTTGGACATTTCCAGAAGGTTCTCACTGCTATTGGAAACTTCTGTATCTGCTCCATTGCTGTTGGAATGTTGATTGAGATTGTAGTCATGTATCCCATTCAGCACAGAAAGTACAGGGACGGAATTAACAATCTCCTTGTACTCTTGATTGGAGGCATTCCCATTGCCATGCCTACCGTCTTGTCTGTGACAATGGCTATTGGATCTCACAGGCTCTCTCAGCAGGGTGCCATCACCAAGAGAATGACCGCCATTGAAGAAATGGCTGGTATGGATGTGCTTTGCAGTGACAAGACAGGAACACTAACTCTCAACAAGCTTAGTATTGACAAAAACTTGATTGAGGTCTTTGCCAAGGGTACGGAGAAAGACCATGTGGTTCTGCTTGCTGCAAGGGCATCTAGAACCGAAAACCAGGATGCCATTGATGCTGCCATGGTTGGAATGCTTGCTGACCCAAAGGAGGCCCGTGCTGGCATTCGAGAAATTCACTTCTTGCCATTTAATCCTGTGGACAAGAGAACTGCTTTGACTTACATTGATTCTGATGGAAACTGGCACAGAGCAAGCAAAGGTGCACCTGAACAGATTTTGGAGCTCTGCAAGTGCAAAGAGGATTTCAAGAAGAAAGCTTTCGCCATTATTGACAAGTATGCTGAACGTGGTCTTCGGTCTTTGGCTGTTGCTAGACAGGAAGTGCCCGCAAAATCAAAAGAAAGTGAGGGCGGTCCATGGCAGTTGGTTGGGTTGTTGCCTCTTTTCGATCCACCAAGACACGATAGTGCAGAAACTATCCGCCAGGCTCTTAATCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAACTTGCTATTGCAAAGGAAACTGGTCGCAGACTTGGAATGGGAACAAACATGTACCCATCTGCTTCCTTACTTGGTCAAGACAAGGATGCAAGCATAGCTGCCCTCCCAATAGAAGAGTTAATCGAGAAGGCTGACGGGTTTGCTGGAGTGTTTCCAGAGCACAAATATGAGATTGTGAAGAAGTTGCAGGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTCAATGATGCCCCTGCATTGAAGAAGGCTGATATTGGAATTGCTGTCGCTGATGCTACAGATGCTGCACGAAGTGCTTCCGACATTGTTCTTACAGAACCCGGATTGAGTGTCATCATCAGTGCAGTGTTGACCAGTAGAGCTATTTTCCAGAGAATGAAGAACTACACGGATAAATTTGGTGTCAGATCTATAAGAGAGAATCCCAAGGAACAAATGGCTGCTTTGTACCTACAAGTCAGTATTGTGAGCCAGGCTCTCATTTTTGTCACTCGATCACGAAGCTGGTCCTTTATGGAACGCCCTGGACTACTATTACTCAGTGCTTTTGCCATCGCCCAGCTGGTTGCAACTTTGATAGCAGTATATGCCAACTGGGGATTTGCAACAATACATGGATGCGGTTGGGGATGGGCCGGTGTCATCTGGCTTTACAGCATTGTCTTCTATTTCCCACTCGACATTATTAAGTTTGCAATCCGTTACATCTTGAGTGGAAAGGCATGGCTCAACATGCTAGAGAACAAGACTGCCTTTACCACCAAGAAAGATTATGGAAAAGAGGAGAGGGAAGCTCAATGGGCTCATGCACAAAGGACCCTTCATGGACTGCAAGCACCAGAAAGTAGTACTCTGTTTAGTGACAAGAGCAGCTACAGAGAGCTGTCTGAGATTGCCGAGCAGGCTAAGAGACGAGCAGAGATGGCAAGACTTCGTGAGCTTACCACACTCAAGGGACATGTCGAGTCAGTGGCGAAGCTGAAGGGGCTGGACCTTGATTCAATCCAGCAGCATTATACAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

782

Amino Acids

85.93

Weight (kDa)

8.48

Isoelectric Point (pI)

38.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	22 - 58	8.1e-07	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	58 - 152	2.8e-30	P-type ATPase actuator domain
Hydrolase	PF00702	248 - 525	1.6e-15	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18960 AT2G18960 AT2G18960 AT4G30190 AT4G30190 AT5G57350 AT5G57350 AT5G57350 AT5G57350
fragaria_vesca	FvH4_4g07810 FvH4_4g07810
malus_domestica	MD13G1247200.v1.1 MD16G1254200.v1.1
prunus_persica	Prupe.1G082000_v2.0.a1
pyrus_communis	pycom12g18290
rosa_chinensis	RchiOBHm_Chr4g0400911
rosa_laevigata	RLG00000009165
rosa_multiflora	Rmu_sc0002026.1_g000039
rosa_roxburghii	Rroxscaffold_5G00345810
rosa_rugosa	Rorug04G0027100
rosa_samantha	Rh4AG104700 Rh4BG099900 Rh4CG113100 Rh4DG096900
rosa_wichuraiana	Rw4G008480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	698
AccI	GTMKAC	1 cut(s)	456
AciI	CCGC	7 cut(s)	114, 119, 720, 1173, 1197, 1267, 1944
AclWI	GGATC	3 cut(s)	284, 682, 1229
AcsI	RAATTY	2 cut(s)	957, 1718
AcuI	CTGAAG	1 cut(s)	2324
AdeI	CACNNNGTG	1 cut(s)	1616
AfaI	GTAC	6 cut(s)	584, 612, 832, 1370, 1772, 2173
AfiI	CCNNNNNNNGG	2 cut(s)	435, 934
AflIII	ACRYGT	2 cut(s)	1365, 2281
AgsI	TTSAA	5 cut(s)	375, 728, 1093, 1564, 2325
AjnI	CCWGG	7 cut(s)	216, 223, 349, 885, 1269, 1794, 1846
AleI	CACNNNNGTG	2 cut(s)	1251, 1521
Alw21I	GWGCWC	3 cut(s)	1051, 1071, 1479
Alw26I	GTCTC	3 cut(s)	40, 246, 2227
Alw44I	GTGCAC	1 cut(s)	1047
AlwI	GGATC	3 cut(s)	284, 682, 1229
AlwNI	CAGNNNCTG	1 cut(s)	1607
Ama87I	CYCGRG	1 cut(s)	137
AoxI	GGCC	2 cut(s)	936, 1956
ApaLI	GTGCAC	1 cut(s)	1047
ApeKI	GCWGC	9 cut(s)	85, 443, 860, 902, 1415, 1607, 1763, 2193, 2332
ApoI	RAATTY	2 cut(s)	957, 1718
ArsI	GACNNNNNNTTYG	2 cut(s)	390, 422
Asp700I	GAANNNNTTC	3 cut(s)	330, 1103, 1618
AspS9I	GGNCC	7 cut(s)	149, 937, 1199, 1830, 1956, 2139, 2314
AsuC2I	CCSGG	1 cut(s)	1644
AsuHPI	GGTGA	4 cut(s)	299, 401, 697, 1322
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	5 cut(s)	149, 1199, 1830, 2139, 2314
BaeGI	GKGCMC	3 cut(s)	10, 1051, 1173
BaeI	ACNNNNGTAYC	2 cut(s)	499, 532
BanI	GGYRCC	1 cut(s)	698
BanII	GRGCYC	3 cut(s)	130, 1071, 2128
BbsI	GAAGAC	3 cut(s)	269, 1130, 1978
Bbv12I	GWGCWC	3 cut(s)	1051, 1071, 1479
BbvI	GCAGC	9 cut(s)	97, 455, 847, 889, 1402, 1594, 1750, 2205, 2344
BccI	CCATC	9 cut(s)	179, 221, 710, 1013, 1381, 1532, 1883, 1947, 2239
BciT130I	CCWGG	7 cut(s)	218, 225, 351, 887, 1271, 1796, 1848
BciVI	GTATCC	1 cut(s)	573
BclI	TGATCA	2 cut(s)	304, 1312
BcnI	CCSGG	1 cut(s)	1644
BcoDI	GTCTC	3 cut(s)	40, 246, 2227
BfaI	CTAG	4 cut(s)	161, 873, 1158, 2060
BfmI	CTRYAG	2 cut(s)	1599, 2197
BfuI	GTATCC	1 cut(s)	573
BglI	GCCNNNNNGGC	1 cut(s)	2225
BglII	AGATCT	1 cut(s)	1730
BisI	GCNGC	9 cut(s)	86, 444, 861, 903, 1416, 1608, 1764, 2194, 2333
BlsI	GCNGC	9 cut(s)	87, 445, 862, 904, 1417, 1609, 1765, 2195, 2334
BmcAI	AGTACT	1 cut(s)	2173
Bme1390I	CCNGG	8 cut(s)	218, 225, 351, 887, 1271, 1644, 1796, 1848
Bme18I	GGWCC	5 cut(s)	149, 1199, 1830, 2139, 2314
BmeT110I	CYCGRG	1 cut(s)	137
BmgT120I	GGNCC	7 cut(s)	149, 937, 1199, 1830, 1956, 2139, 2314
BmiI	GGNNCC	5 cut(s)	127, 151, 222, 700, 2141
BmrFI	CCNGG	8 cut(s)	218, 225, 351, 887, 1271, 1644, 1796, 1848
BmrI	ACTGGG	1 cut(s)	1927
BmuI	ACTGGG	1 cut(s)	1927
BpiI	GAAGAC	3 cut(s)	269, 1130, 1978
BplI	GAGNNNNNCTC	4 cut(s)	1783, 1815, 2101, 2133
BpmI	CTGGAG	1 cut(s)	1482
BpuEI	CTTGAG	4 cut(s)	49, 302, 2053, 2258
BpuMI	CCSGG	1 cut(s)	1644
BsaJI	CCNNGG	5 cut(s)	825, 906, 1202, 1749, 1846
BsaXI	ACNNNNNCTCC	6 cut(s)	243, 273, 345, 375, 1527, 1557
Bsc4I	CCNNNNNNNGG	2 cut(s)	435, 934
Bse118I	RCCGGY	1 cut(s)	1958
Bse1I	ACTGG	7 cut(s)	335, 421, 1031, 1312, 1342, 1677, 1922
Bse3DI	GCAATG	3 cut(s)	408, 525, 633
BseBI	CCWGG	7 cut(s)	218, 225, 351, 887, 1271, 1796, 1848
BseDI	CCNNGG	5 cut(s)	825, 906, 1202, 1749, 1846
BseGI	GGATG	8 cut(s)	211, 213, 346, 751, 895, 1408, 1946, 1958
BseLI	CCNNNNNNNGG	2 cut(s)	435, 934
BseMI	GCAATG	3 cut(s)	408, 525, 633
BseMII	CTCAG	4 cut(s)	189, 704, 1876, 2202
BseNI	ACTGG	7 cut(s)	335, 421, 1031, 1312, 1342, 1677, 1922
BseRI	GAGGAG	3 cut(s)	46, 215, 2120
BseSI	GKGCMC	3 cut(s)	10, 1051, 1173
BseXI	GCAGC	9 cut(s)	97, 455, 847, 889, 1402, 1594, 1750, 2205, 2344
BseYI	CCCAGC	2 cut(s)	262, 1881
BsgI	GTGCAG	3 cut(s)	1275, 1593, 1686
BshFI	GGCC	2 cut(s)	938, 1958
BshNI	GGYRCC	1 cut(s)	698
BsiHKAI	GWGCWC	3 cut(s)	1051, 1071, 1479
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	2 cut(s)	1644, 1959
BslFI	GGGAC	4 cut(s)	135, 245, 602, 2292
BslI	CCNNNNNNNGG	2 cut(s)	435, 934
BsmAI	GTCTC	3 cut(s)	40, 246, 2227
BsmBI	CGTCTC	1 cut(s)	2227
BsmFI	GGGAC	4 cut(s)	135, 245, 602, 2292
BsmI	GAATGC	3 cut(s)	627, 921, 948
BsnI	GGCC	2 cut(s)	938, 1958
BsoBI	CYCGRG	1 cut(s)	137
Bsp1286I	GDGCHC	7 cut(s)	10, 130, 1051, 1071, 1173, 1479, 2128
Bsp143I	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
Bsp19I	CCATGG	2 cut(s)	906, 1202
BspACI	CCGC	7 cut(s)	114, 119, 720, 1173, 1197, 1267, 1944
BspANI	GGCC	2 cut(s)	938, 1958
BspCNI	CTCAG	4 cut(s)	190, 703, 1875, 2203
BspLI	GGNNCC	5 cut(s)	127, 151, 222, 700, 2141
BspPI	GGATC	3 cut(s)	284, 682, 1229
BspT107I	GGYRCC	1 cut(s)	698
BsrDI	GCAATG	3 cut(s)	408, 525, 633
BsrFI	RCCGGY	1 cut(s)	1958
BsrI	ACTGG	7 cut(s)	335, 421, 1031, 1312, 1342, 1677, 1922
BssAI	RCCGGY	1 cut(s)	1958
BssECI	CCNNGG	5 cut(s)	825, 906, 1202, 1749, 1846
BssMI	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
BssT1I	CCWWGG	4 cut(s)	825, 906, 1202, 1749
Bst2UI	CCWGG	7 cut(s)	218, 225, 351, 887, 1271, 1796, 1848
Bst4CI	ACNGT	3 cut(s)	51, 649, 2344
Bst6I	CTCTTC	2 cut(s)	159, 1425
BstAPI	GCANNNNNTGC	2 cut(s)	1616, 1910
BstC8I	GCNNGC	8 cut(s)	858, 921, 946, 1039, 1173, 1408, 2157, 2226
BstDEI	CTNAG	8 cut(s)	110, 179, 198, 690, 791, 1862, 2211, 2229
BstDSI	CCRYGG	2 cut(s)	906, 1202
BstF5I	GGATG	8 cut(s)	211, 213, 346, 751, 895, 1408, 1946, 1958
BstKTI	GATC	9 cut(s)	38, 57, 292, 307, 677, 1237, 1315, 1733, 1820
BstMAI	GTCTC	3 cut(s)	40, 246, 2227
BstMBI	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
BstNI	CCWGG	7 cut(s)	218, 225, 351, 887, 1271, 1796, 1848
BstNSI	RCATGY	3 cut(s)	1369, 2059, 2285
BstSCI	CCNGG	8 cut(s)	216, 223, 349, 885, 1269, 1642, 1794, 1846
BstSFI	CTRYAG	2 cut(s)	1599, 2197
BstSLI	GKGCMC	3 cut(s)	10, 1051, 1173
BstV1I	GCAGC	9 cut(s)	97, 455, 847, 889, 1402, 1594, 1750, 2205, 2344
BstV2I	GAAGAC	3 cut(s)	269, 1130, 1978
BstX2I	RGATCY	2 cut(s)	674, 1730
BstYI	RGATCY	2 cut(s)	674, 1730
BsuI	GTATCC	1 cut(s)	573
BsuRI	GGCC	2 cut(s)	938, 1958
BtgI	CCRYGG	2 cut(s)	906, 1202
BtgZI	GCGATG	1 cut(s)	1861
BtsCI	GGATG	8 cut(s)	211, 213, 346, 751, 895, 1408, 1946, 1958
BtsI	GCAGTG	3 cut(s)	495, 763, 1674
BtsIMutI	CAGTG	9 cut(s)	342, 414, 495, 763, 1669, 1674, 1870, 2298, 2349
Cac8I	GCNNGC	8 cut(s)	858, 921, 946, 1039, 1173, 1408, 2157, 2226
CaiI	CAGNNNCTG	1 cut(s)	1607
Cfr10I	RCCGGY	1 cut(s)	1958
Cfr13I	GGNCC	7 cut(s)	149, 937, 1199, 1830, 1956, 2139, 2314
Csp6I	GTAC	6 cut(s)	583, 611, 831, 1369, 1771, 2172
CviQI	GTAC	6 cut(s)	583, 611, 831, 1369, 1771, 2172
DdeI	CTNAG	8 cut(s)	110, 179, 198, 690, 791, 1862, 2211, 2229
DpnI	GATC	9 cut(s)	37, 56, 291, 306, 676, 1236, 1314, 1732, 1819
DpnII	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
DraI	TTTAAA	1 cut(s)	297
DraIII	CACNNNGTG	1 cut(s)	1616
Eam1104I	CTCTTC	2 cut(s)	159, 1425
EarI	CTCTTC	2 cut(s)	159, 1425
EciI	GGCGGA	2 cut(s)	134, 1256
Ecl136II	GAGCTC	1 cut(s)	1069
Eco130I	CCWWGG	4 cut(s)	825, 906, 1202, 1749
Eco24I	GRGCYC	3 cut(s)	130, 1071, 2128
Eco32I	GATATC	1 cut(s)	232
Eco47I	GGWCC	5 cut(s)	149, 1199, 1830, 2139, 2314
Eco53kI	GAGCTC	1 cut(s)	1069
Eco57I	CTGAAG	1 cut(s)	2324
Eco88I	CYCGRG	1 cut(s)	137
EcoICRI	GAGCTC	1 cut(s)	1069
EcoO109I	RGGNCCY	1 cut(s)	2139
EcoRII	CCWGG	7 cut(s)	216, 223, 349, 885, 1269, 1794, 1846
EcoRV	GATATC	1 cut(s)	232
EcoT14I	CCWWGG	4 cut(s)	825, 906, 1202, 1749
EcoT38I	GRGCYC	3 cut(s)	130, 1071, 2128
ErhI	CCWWGG	4 cut(s)	825, 906, 1202, 1749
Esp3I	CGTCTC	1 cut(s)	2227
FalI	AAGNNNNNCTT	2 cut(s)	2060, 2092
FaqI	GGGAC	4 cut(s)	135, 245, 602, 2292
FauI	CCCGC	2 cut(s)	107, 1180
FbaI	TGATCA	2 cut(s)	304, 1312
FblI	GTMKAC	1 cut(s)	456
Fnu4HI	GCNGC	9 cut(s)	86, 444, 861, 903, 1416, 1608, 1764, 2194, 2333
FokI	GGATG	8 cut(s)	200, 218, 333, 758, 902, 1415, 1953, 1965
FriOI	GRGCYC	3 cut(s)	130, 1071, 2128
Fsp4HI	GCNGC	9 cut(s)	86, 444, 861, 903, 1416, 1608, 1764, 2194, 2333
FspBI	CTAG	4 cut(s)	161, 873, 1158, 2060
GluI	GCNGC	9 cut(s)	86, 444, 861, 903, 1416, 1608, 1764, 2194, 2333
GsaI	CCCAGC	2 cut(s)	266, 1885
GsuI	CTGGAG	1 cut(s)	1482
HaeIII	GGCC	2 cut(s)	938, 1958
HapII	CCGG	2 cut(s)	1644, 1959
HincII	GTYRAC	1 cut(s)	1674
HindII	GTYRAC	1 cut(s)	1674
HindIII	AAGCTT	2 cut(s)	788, 1101
HinfI	GANTC	6 cut(s)	61, 326, 1013, 1744, 2288, 2321
HpaII	CCGG	2 cut(s)	1644, 1959
HphI	GGTGA	4 cut(s)	299, 401, 697, 1322
Hpy166II	GTNNAC	5 cut(s)	424, 457, 985, 1049, 1674
Hpy188I	TCNGA	5 cut(s)	199, 1018, 1624, 1730, 2212
Hpy8I	GTNNAC	5 cut(s)	424, 457, 985, 1049, 1674
HpyCH4III	ACNGT	3 cut(s)	51, 649, 2344
HpyCH4IV	ACGT	1 cut(s)	1132
HpyF3I	CTNAG	8 cut(s)	110, 179, 198, 690, 791, 1862, 2211, 2229
HpySE526I	ACGT	1 cut(s)	1132
Ksp22I	TGATCA	2 cut(s)	304, 1312
Kzo9I	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
LmnI	GCTCC	3 cut(s)	125, 527, 1066
Lsp1109I	GCAGC	9 cut(s)	97, 455, 847, 889, 1402, 1594, 1750, 2205, 2344
MaeI	CTAG	4 cut(s)	161, 873, 1158, 2060
MaeII	ACGT	1 cut(s)	1132
MaeIII	GTNAC	6 cut(s)	337, 658, 758, 1810, 2024, 2183
MalI	GATC	9 cut(s)	37, 56, 291, 306, 676, 1236, 1314, 1732, 1819
MboI	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
MflI	RGATCY	2 cut(s)	674, 1730
MhlI	GDGCHC	7 cut(s)	10, 130, 1051, 1071, 1173, 1479, 2128
MluCI	AATT	4 cut(s)	594, 957, 1581, 1718
MlyI	GAGTC	1 cut(s)	2297
MmeI	TCCRAC	4 cut(s)	454, 514, 892, 1647
MroXI	GAANNNNTTC	3 cut(s)	330, 1103, 1618
MseI	TTAA	7 cut(s)	296, 597, 975, 1278, 1296, 1436, 2010
MslI	CAYNNNNRTG	4 cut(s)	638, 1251, 1482, 1521
MspA1I	CMGCKG	3 cut(s)	88, 266, 1885
MspI	CCGG	2 cut(s)	1644, 1959
MspR9I	CCNGG	8 cut(s)	218, 225, 351, 887, 1271, 1644, 1796, 1848
Mva1269I	GAATGC	3 cut(s)	627, 921, 948
MvaI	CCWGG	7 cut(s)	218, 225, 351, 887, 1271, 1796, 1848
NciI	CCSGG	1 cut(s)	1644
NcoI	CCATGG	2 cut(s)	906, 1202
NdeII	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
NlaIV	GGNNCC	5 cut(s)	127, 151, 222, 700, 2141
NmeAIII	GCCGAG	1 cut(s)	2245
NmuCI	GTSAC	5 cut(s)	337, 658, 758, 1810, 2183
NspI	RCATGY	3 cut(s)	1369, 2059, 2285
OliI	CACNNNNGTG	2 cut(s)	1251, 1521
PaeR7I	CTCGAG	1 cut(s)	137
PciI	ACATGT	2 cut(s)	1365, 2281
PctI	GAATGC	3 cut(s)	627, 921, 948
PdmI	GAANNNNTTC	3 cut(s)	330, 1103, 1618
PfeI	GAWTC	5 cut(s)	61, 326, 1013, 1744, 2321
PflFI	GACNNNGTC	1 cut(s)	257
PfoI	TCCNGGA	2 cut(s)	223, 349
PkrI	GCNGC	9 cut(s)	87, 445, 862, 904, 1417, 1609, 1765, 2195, 2334
PleI	GAGTC	1 cut(s)	2296
PpsI	GAGTC	1 cut(s)	2296
PpuMI	RGGWCCY	1 cut(s)	2139
PscI	ACATGT	2 cut(s)	1365, 2281
Psp124BI	GAGCTC	1 cut(s)	1071
Psp5II	RGGWCCY	1 cut(s)	2139
Psp6I	CCWGG	7 cut(s)	216, 223, 349, 885, 1269, 1794, 1846
PspFI	CCCAGC	2 cut(s)	262, 1881
PspGI	CCWGG	7 cut(s)	216, 223, 349, 885, 1269, 1794, 1846
PspN4I	GGNNCC	5 cut(s)	127, 151, 222, 700, 2141
PspPI	GGNCC	7 cut(s)	149, 937, 1199, 1830, 1956, 2139, 2314
PspPPI	RGGWCCY	1 cut(s)	2139
PstNI	CAGNNNCTG	1 cut(s)	1607
PsuI	RGATCY	2 cut(s)	674, 1730
PsyI	GACNNNGTC	1 cut(s)	257
PvuII	CAGCTG	3 cut(s)	88, 266, 1885
RsaI	GTAC	6 cut(s)	584, 612, 832, 1370, 1772, 2173
RsaNI	GTAC	6 cut(s)	583, 611, 831, 1369, 1771, 2172
RseI	CAYNNNNRTG	4 cut(s)	638, 1251, 1482, 1521
SacI	GAGCTC	1 cut(s)	1071
SaqAI	TTAA	7 cut(s)	296, 597, 975, 1278, 1296, 1436, 2010
SatI	GCNGC	9 cut(s)	86, 444, 861, 903, 1416, 1608, 1764, 2194, 2333
Sau3AI	GATC	9 cut(s)	35, 54, 289, 304, 674, 1234, 1312, 1730, 1817
Sau96I	GGNCC	7 cut(s)	149, 937, 1199, 1830, 1956, 2139, 2314
ScaI	AGTACT	1 cut(s)	2173
SchI	GAGTC	1 cut(s)	2297
ScrFI	CCNGG	8 cut(s)	218, 225, 351, 887, 1271, 1644, 1796, 1848
SduI	GDGCHC	7 cut(s)	10, 130, 1051, 1071, 1173, 1479, 2128
SfcI	CTRYAG	2 cut(s)	1599, 2197
Sfr274I	CTCGAG	1 cut(s)	137
SinI	GGWCC	5 cut(s)	149, 1199, 1830, 2139, 2314
SlaI	CTCGAG	1 cut(s)	137
SmiMI	CAYNNNNRTG	4 cut(s)	638, 1251, 1482, 1521
SmlI	CTYRAG	5 cut(s)	28, 137, 281, 2032, 2273
SmoI	CTYRAG	5 cut(s)	28, 137, 281, 2032, 2273
Sse9I	AATT	4 cut(s)	594, 957, 1581, 1718
SsiI	CCGC	7 cut(s)	114, 119, 720, 1173, 1197, 1267, 1944
SspMI	CTAG	4 cut(s)	161, 873, 1158, 2060
SstI	GAGCTC	1 cut(s)	1071
StyD4I	CCNGG	8 cut(s)	216, 223, 349, 885, 1269, 1642, 1794, 1846
StyI	CCWWGG	4 cut(s)	825, 906, 1202, 1749
TaaI	ACNGT	3 cut(s)	51, 649, 2344
TaiI	ACGT	1 cut(s)	1135
TaqI	TCGA	8 cut(s)	138, 396, 952, 1233, 1440, 1816, 2001, 2286
TaqII	GACCGA	1 cut(s)	1131
TasI	AATT	4 cut(s)	594, 957, 1581, 1718
TatI	WGTACW	3 cut(s)	582, 610, 2171
TfiI	GAWTC	5 cut(s)	61, 326, 1013, 1744, 2321
Tru1I	TTAA	7 cut(s)	296, 597, 975, 1278, 1296, 1436, 2010
Tru9I	TTAA	7 cut(s)	296, 597, 975, 1278, 1296, 1436, 2010
TscAI	CASTG	9 cut(s)	342, 421, 502, 763, 1669, 1674, 1870, 2298, 2349
TseFI	GTSAC	5 cut(s)	337, 658, 758, 1810, 2183
TseI	GCWGC	9 cut(s)	85, 443, 860, 902, 1415, 1607, 1763, 2193, 2332
Tsp45I	GTSAC	5 cut(s)	337, 658, 758, 1810, 2183
TspDTI	ATGAA	3 cut(s)	372, 1715, 2135
TspGWI	ACGGA	5 cut(s)	25, 606, 848, 1727, 2012
TspRI	CASTG	9 cut(s)	342, 421, 502, 763, 1669, 1674, 1870, 2298, 2349
Tth111I	GACNNNGTC	1 cut(s)	257
VneI	GTGCAC	1 cut(s)	1047
VpaK11BI	GGWCC	5 cut(s)	149, 1199, 1830, 2139, 2314
XapI	RAATTY	2 cut(s)	957, 1718
XbaI	TCTAGA	1 cut(s)	872
XceI	RCATGY	3 cut(s)	1369, 2059, 2285
XcmI	CCANNNNNNNNNTGG	4 cut(s)	431, 730, 1756, 1882
XhoI	CTCGAG	1 cut(s)	137
XmiI	GTMKAC	1 cut(s)	456
XmnI	GAANNNNTTC	3 cut(s)	330, 1103, 1618
XspI	CTAG	4 cut(s)	161, 873, 1158, 2060
ZrmI	AGTACT	1 cut(s)	2173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.