Rroxscaffold_5G00365350

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0021068
Physical Location & Seq
Reverse (-)
46896009 .. 46902674
6666 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00365350.1

Sequence Viewer

Length: 2229 bp
ATGGCGGCGTCTAAGGCCCCGGACCGTAATATCAAAGGCTCCTTTGAGTCCTTTCTTCCTCATAGGCTGTCCGCGATGTGGCCCATAGGTGCGGTGAGAGAATATTGGAATGCCATTGAGAAGCACCCTTCCAGGGCTATTGTCTGCATCCAGTTTCTGGTTTTGAGCCACAGTTATGCAAACAGGGCGATAGTGTCTGTGTTGATAACCTACATCACGGTTAATTGGAAGCATGAACATTTTAACCTAGCTGCCGTGAATACAGCTGTGGTGGAAGCGGATATTGCAGCTTGGGAAGTTTATATAGCATGTTTGCTAATATCATTGGGTGAAGCAGGACGAAGTGCTGCTTTGGGAAGCTTTCTGCGGGATCAATACTTGAGCGAAATAGATCAAAGAGAAAGCACAGACGAAAACATTCTGGAAACTCGTCTAGAAGCTTTGTGGGACGTTCCTTGGTTTTTCGGTTCATTATTTCCCCTTATTCCTGTGATTTCATCTGGGCCAACTATTCTCATCTTCTCAGCGGCTTCTATTGGAGTCTCTTCTTTCGTCTTCTGGTGGGCTCGCTCCAATTACTTCATATACAATGGAAGTCTTGGAGGCACATATAAAACCGGACAAGTTCAAATGTGCACAACCTCGTGTCCCCTAGTTGAAGCAAGAGATCAAAACGGAGATCAGATTTGCCAAGACGACGCAGAAGAGACTAGCACTACCTCTTGTCTAGTAGACAGAGCACCAAGAAGGGAAACTTGTATAGCCATAGGAGGGAACGTCAGTACAGTACAACGAGTACAAACAATGGACCTAGCCACAATCCGGTGCCCAGTATATGAAGAAACGCATCAAAGAGGAAGACAGATTTGTGCACTAGACACAGGAATGCCTGACACTCATTCTGTAATGGACGACGCAGAAAGTAGGGGAATCGGCACAGAAGAAACTCCAAGTACAAAAGAAGAATCACTATCAAGAGCTGAAATTCACAGAGACATAGAAGAGACTACAAGTACAGAAGAAGAATCACTATCAAGAGCTGAAATTCACACAGACACAGAAGGGAACCCATGTGCAGTAGAAGAATCACTATCAAGAGCTGAAATTCACACAGACATAGAAGAGGACCCCTGTTCAGCAGAAGAATCACTATCAAGAGCTGAAATTCAGAGAGACACAGAAGAGACTCCAGGTACAAAAGAAGAATCACTATCAAGAGCTGATATTCACACAGACACAGAAGGGAACCCCTGTCCAGTAGAAGAATCACCATCAAGAGCTGAAATTCACACAGACACAGAAGAGGACCCCCGTTCAGCAGAAGAATCACTATCAAGAGCTGAAGTTGACACAAACACAAAACGGGACCCCTGTAGTTCAATTGAACAAGAACAGAGTAAAGAGTCTAACGTTGCAACACGAGTGAGCCACCCAATAGGACAAACAGGAGAAAGAGAGGTTTGGACACGAAAAAAATTGAAGGACGAACTGCCTTTTTTAAAAAAGATGTTACCTATGTGGCTTGCCTTTATCATATACACTATGGTGGATGCAGCAGGTAGCTCTTTTTTCTTCGGGCAAATAAGTAACTTGGATGATCTCATAGGCAATTCTGCAGTTTATTTTGCAGGATTAACCTCATTTACAGCATCTGTAGTCTCATTTCTTCACAAAAAAGTTATAGCTCCAAAGAAGTGGAGACATGCTACGTTGGTGAATATTGGTTCTGCAGTGACATGTTCTCAGCTATGTTGCTTTGCTGCTTGGCTGGTTGAGGTATACAGGTTAAACTCTGTTAAGAGCAAAGGACTTGAAAATGATAATACCACTATTGTTTCCATGAGCATCTTTCTGTTAGTTCCCCAGTTTTTCCTGTTGGGGATCATGAGAGGCCTATCGAAAGAAGGGTTGGTTGATTTTTACAATGATCGGAATCATCGGATAAATAATGATGATAAGCTGATGGAGAGGTATGGAGAACACATCACTTCTTTCGTCCTTGGAGTTATAAGACTGCTCACCACTATTAATATACTGGTGCCCTTGTTTGTGTACAAGAAAAGTTGGTTTGGTGACAATATAAACACGAGTCGCCTAGATCTGTATTTCTTTGTGTTAACACTCTGCAGTCTTGTTAGCATTGGCTACTATTTGTGTGTTGCACACTATTATGCAACATCTAGATCACCAAATGCAGTTGGAGAAGAAGAACAAGAACAGAGCGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

742

Amino Acids

82.89

Weight (kDa)

4.9

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g29000
rosa_chinensis RchiOBHm_Chr4g0423201
rosa_multiflora Rmu_sc0007269.1_g000012
rosa_roxburghii Rroxscaffold_5G00365350
rosa_samantha Rh4CG258900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2009
Acc36I ACCTGC 1 cut(s) 1547
AccB1I GGYRCC 2 cut(s) 825, 2038
AccB7I CCANNNNNTGG 1 cut(s) 157
AccI GTMKAC 2 cut(s) 732, 1779
AccII CGCG 2 cut(s) 74, 2225
AciI CCGC 6 cut(s) 5, 72, 92, 278, 367, 527
AclI AACGTT 1 cut(s) 1410
AclWI GGATC 2 cut(s) 378, 1889
AcsI RAATTY 5 cut(s) 984, 1044, 1104, 1164, 1284
AcuI CTGAAG 1 cut(s) 1362
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 7 cut(s) 784, 789, 798, 955, 1015, 1195, 2054
AfiI CCNNNNNNNGG 5 cut(s) 78, 133, 157, 771, 822
AflIII ACRYGT 1 cut(s) 1736
AgsI TTSAA 6 cut(s) 629, 659, 1380, 1385, 1480, 1814
AjnI CCWGG 2 cut(s) 131, 1189
AjuI GAANNNNNNNTTGG 2 cut(s) 1892, 1924
AleI CACNNNNGTG 1 cut(s) 1544
Alw21I GWGCWC 3 cut(s) 638, 742, 874
Alw26I GTCTC 8 cut(s) 547, 701, 987, 998, 1167, 1178, 1663, 1693
Alw44I GTGCAC 2 cut(s) 634, 870
AlwI GGATC 2 cut(s) 378, 1889
AlwNI CAGNNNCTG 2 cut(s) 157, 1652
AoxI GGCC 4 cut(s) 15, 80, 503, 1891
ApaLI GTGCAC 2 cut(s) 634, 870
ApeKI GCWGC 5 cut(s) 251, 287, 347, 1553, 1760
ApoI RAATTY 5 cut(s) 984, 1044, 1104, 1164, 1284
AseI ATTAAT 1 cut(s) 2028
Asp700I GAANNNNTTC 1 cut(s) 417
AspLEI GCGC 1 cut(s) 2225
AspS9I GGNCC 8 cut(s) 16, 22, 81, 503, 808, 1126, 1306, 1366
AsuC2I CCSGG 1 cut(s) 20
AsuHPI GGTGA 7 cut(s) 106, 341, 1260, 1726, 2011, 2084, 2178
AvaII GGWCC 5 cut(s) 22, 808, 1126, 1306, 1366
BaeGI GKGCMC 4 cut(s) 638, 830, 874, 2043
BanI GGYRCC 2 cut(s) 825, 2038
BanII GRGCYC 1 cut(s) 568
BauI CACGAG 3 cut(s) 643, 1419, 2086
BbsI GAAGAC 2 cut(s) 547, 865
Bbv12I GWGCWC 3 cut(s) 638, 742, 874
BbvI GCAGC 5 cut(s) 238, 299, 334, 1565, 1747
BccI CCATC 2 cut(s) 1279, 1957
BceAI ACGGC 1 cut(s) 239
BciT130I CCWGG 2 cut(s) 133, 1191
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 8 cut(s) 547, 701, 987, 998, 1167, 1178, 1663, 1693
BfaI CTAG 9 cut(s) 248, 434, 653, 711, 728, 812, 875, 2096, 2181
BfmI CTRYAG 5 cut(s) 1372, 1614, 1653, 1728, 2125
BfuAI ACCTGC 1 cut(s) 1547
BglII AGATCT 1 cut(s) 2098
BisI GCNGC 7 cut(s) 6, 252, 288, 348, 528, 1554, 1761
BlsI GCNGC 7 cut(s) 7, 253, 289, 349, 529, 1555, 1762
Bme1390I CCNGG 3 cut(s) 20, 133, 1191
Bme18I GGWCC 5 cut(s) 22, 808, 1126, 1306, 1366
BmgT120I GGNCC 8 cut(s) 16, 22, 81, 503, 808, 1126, 1306, 1366
BmrFI CCNGG 3 cut(s) 20, 133, 1191
BmrI ACTGGG 2 cut(s) 824, 1858
BmsI GCATC 5 cut(s) 156, 856, 1540, 1658, 1854
BmuI ACTGGG 2 cut(s) 824, 1858
BpiI GAAGAC 2 cut(s) 547, 865
BpmI CTGGAG 1 cut(s) 1173
BpuEI CTTGAG 1 cut(s) 400
BpuMI CCSGG 1 cut(s) 20
BsaBI GATNNNNATC 1 cut(s) 1932
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 4 cut(s) 18, 132, 455, 1999
BsaWI WCCGGW 2 cut(s) 617, 822
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 133, 157, 771, 822
Bse1I ACTGG 5 cut(s) 151, 830, 1256, 1864, 2040
Bse8I GATNNNNATC 1 cut(s) 1932
BseBI CCWGG 2 cut(s) 133, 1191
BseDI CCNNGG 4 cut(s) 18, 132, 455, 1999
BseGI GGATG 3 cut(s) 147, 1555, 1600
BseJI GATNNNNATC 1 cut(s) 1932
BseLI CCNNNNNNNGG 5 cut(s) 78, 133, 157, 771, 822
BseMII CTCAG 2 cut(s) 537, 1757
BseNI ACTGG 5 cut(s) 151, 830, 1256, 1864, 2040
BseSI GKGCMC 4 cut(s) 638, 830, 874, 2043
BseXI GCAGC 5 cut(s) 238, 299, 334, 1565, 1747
BsgI GTGCAG 1 cut(s) 1095
Bsh1236I CGCG 2 cut(s) 74, 2225
BshFI GGCC 4 cut(s) 17, 82, 505, 1893
BshNI GGYRCC 2 cut(s) 825, 2038
BsiHKAI GWGCWC 3 cut(s) 638, 742, 874
BsiSI CCGG 3 cut(s) 20, 618, 823
BslFI GGGAC 3 cut(s) 461, 633, 1379
BslI CCNNNNNNNGG 5 cut(s) 78, 133, 157, 771, 822
BsmAI GTCTC 8 cut(s) 547, 701, 987, 998, 1167, 1178, 1663, 1693
BsmFI GGGAC 3 cut(s) 461, 633, 1379
BsmI GAATGC 2 cut(s) 115, 891
BsnI GGCC 4 cut(s) 17, 82, 505, 1893
Bsp1286I GDGCHC 6 cut(s) 568, 638, 742, 830, 874, 2043
Bsp1407I TGTACA 1 cut(s) 2052
Bsp143I GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
BspACI CCGC 6 cut(s) 5, 72, 92, 278, 367, 527
BspANI GGCC 4 cut(s) 17, 82, 505, 1893
BspCNI CTCAG 2 cut(s) 536, 1756
BspFNI CGCG 2 cut(s) 74, 2225
BspHI TCATGA 1 cut(s) 1884
BspMAI CTGCAG 3 cut(s) 1618, 1732, 2129
BspMI ACCTGC 1 cut(s) 1547
BspPI GGATC 2 cut(s) 378, 1889
BspT107I GGYRCC 2 cut(s) 825, 2038
BsrGI TGTACA 1 cut(s) 2052
BsrI ACTGG 5 cut(s) 151, 830, 1256, 1864, 2040
BssECI CCNNGG 4 cut(s) 18, 132, 455, 1999
BssMI GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
BssNAI GTATAC 1 cut(s) 1780
BssNI GRCGYC 1 cut(s) 8
BssSI CACGAG 3 cut(s) 643, 1419, 2086
BssT1I CCWWGG 2 cut(s) 455, 1999
Bst1107I GTATAC 1 cut(s) 1780
Bst2BI CACGAG 3 cut(s) 643, 1419, 2086
Bst2UI CCWGG 2 cut(s) 133, 1191
Bst4CI ACNGT 4 cut(s) 26, 173, 220, 787
Bst6I CTCTTC 6 cut(s) 550, 699, 996, 1116, 1176, 1296
BstACI GRCGYC 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 2052
BstC8I GCNNGC 2 cut(s) 568, 1524
BstDEI CTNAG 3 cut(s) 12, 523, 1743
BstF5I GGATG 3 cut(s) 147, 1555, 1600
BstFNI CGCG 2 cut(s) 74, 2225
BstHHI GCGC 1 cut(s) 2225
BstKTI GATC 9 cut(s) 373, 394, 670, 682, 1600, 1884, 1930, 2101, 2186
BstMAI GTCTC 8 cut(s) 547, 701, 987, 998, 1167, 1178, 1663, 1693
BstMBI GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
BstMWI GCNNNNNNNGC 3 cut(s) 14, 185, 284
BstNI CCWGG 2 cut(s) 133, 1191
BstNSI RCATGY 3 cut(s) 312, 1706, 1740
BstSCI CCNGG 3 cut(s) 18, 131, 1189
BstSFI CTRYAG 5 cut(s) 1372, 1614, 1653, 1728, 2125
BstSLI GKGCMC 4 cut(s) 638, 830, 874, 2043
BstUI CGCG 2 cut(s) 74, 2225
BstV1I GCAGC 5 cut(s) 238, 299, 334, 1565, 1747
BstV2I GAAGAC 2 cut(s) 547, 865
BstX2I RGATCY 1 cut(s) 2098
BstXI CCANNNNNNTGG 1 cut(s) 1695
BstYI RGATCY 1 cut(s) 2098
BstZ17I GTATAC 1 cut(s) 1780
BsuRI GGCC 4 cut(s) 17, 82, 505, 1893
BtgZI GCGATG 1 cut(s) 89
BtsCI GGATG 3 cut(s) 147, 1555, 1600
BtsI GCAGTG 1 cut(s) 1737
BtsIMutI CAGTG 1 cut(s) 1737
BveI ACCTGC 1 cut(s) 1547
Cac8I GCNNGC 2 cut(s) 568, 1524
CaiI CAGNNNCTG 2 cut(s) 157, 1652
CciI TCATGA 1 cut(s) 1884
CfoI GCGC 1 cut(s) 2225
Cfr13I GGNCC 8 cut(s) 16, 22, 81, 503, 808, 1126, 1306, 1366
CpoI CGGWCCG 1 cut(s) 22
CseI GACGC 2 cut(s) 707, 923
Csp6I GTAC 7 cut(s) 783, 788, 797, 954, 1014, 1194, 2053
CspI CGGWCCG 1 cut(s) 22
CviAII CATG 7 cut(s) 233, 309, 1071, 1703, 1737, 1840, 1885
CviQI GTAC 7 cut(s) 783, 788, 797, 954, 1014, 1194, 2053
DdeI CTNAG 3 cut(s) 12, 523, 1743
DpnI GATC 9 cut(s) 372, 393, 669, 681, 1599, 1883, 1929, 2100, 2185
DpnII GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
DraI TTTAAA 1 cut(s) 1500
Eam1104I CTCTTC 6 cut(s) 550, 699, 996, 1116, 1176, 1296
EarI CTCTTC 6 cut(s) 550, 699, 996, 1116, 1176, 1296
Eco130I CCWWGG 2 cut(s) 455, 1999
Eco147I AGGCCT 1 cut(s) 1893
Eco24I GRGCYC 1 cut(s) 568
Eco47I GGWCC 5 cut(s) 22, 808, 1126, 1306, 1366
Eco57I CTGAAG 1 cut(s) 1362
EcoO109I RGGNCCY 4 cut(s) 16, 1126, 1306, 1366
EcoRII CCWGG 2 cut(s) 131, 1189
EcoT14I CCWWGG 2 cut(s) 455, 1999
EcoT38I GRGCYC 1 cut(s) 568
ErhI CCWWGG 2 cut(s) 455, 1999
FaeI CATG 7 cut(s) 236, 312, 1074, 1706, 1740, 1843, 1888
FalI AAGNNNNNCTT 4 cut(s) 334, 366, 739, 771
FaqI GGGAC 3 cut(s) 461, 633, 1379
FatI CATG 7 cut(s) 232, 308, 1070, 1702, 1736, 1839, 1884
FauI CCCGC 1 cut(s) 360
FblI GTMKAC 2 cut(s) 732, 1779
Fnu4HI GCNGC 7 cut(s) 6, 252, 288, 348, 528, 1554, 1761
FokI GGATG 3 cut(s) 134, 1562, 1607
FriOI GRGCYC 1 cut(s) 568
Fsp4HI GCNGC 7 cut(s) 6, 252, 288, 348, 528, 1554, 1761
FspBI CTAG 9 cut(s) 248, 434, 653, 711, 728, 812, 875, 2096, 2181
GlaI GCGC 1 cut(s) 2224
GluI GCNGC 7 cut(s) 6, 252, 288, 348, 528, 1554, 1761
GsuI CTGGAG 1 cut(s) 1173
HaeIII GGCC 4 cut(s) 17, 82, 505, 1893
HapII CCGG 3 cut(s) 20, 618, 823
HgaI GACGC 2 cut(s) 707, 923
HhaI GCGC 1 cut(s) 2225
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 7 cut(s) 236, 312, 1074, 1706, 1740, 1843, 1888
Hin6I GCGC 1 cut(s) 2223
HinP1I GCGC 1 cut(s) 2223
HincII GTYRAC 2 cut(s) 1348, 2118
HindII GTYRAC 2 cut(s) 1348, 2118
HindIII AAGCTT 2 cut(s) 358, 438
HpaI GTTAAC 1 cut(s) 2118
HpaII CCGG 3 cut(s) 20, 618, 823
HphI GGTGA 7 cut(s) 106, 341, 1260, 1726, 2011, 2084, 2178
Hpy166II GTNNAC 7 cut(s) 636, 733, 872, 1348, 1780, 2053, 2118
Hpy188I TCNGA 4 cut(s) 684, 1170, 1932, 1941
Hpy8I GTNNAC 7 cut(s) 636, 733, 872, 1348, 1780, 2053, 2118
Hpy99I CGWCG 2 cut(s) 701, 917
HpyAV CCTTC 6 cut(s) 138, 741, 1055, 1235, 1474, 1898
HpyCH4III ACNGT 4 cut(s) 26, 173, 220, 787
HpyCH4IV ACGT 4 cut(s) 450, 777, 1410, 1709
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 185, 284
HpyF3I CTNAG 3 cut(s) 12, 523, 1743
HpySE526I ACGT 4 cut(s) 450, 777, 1410, 1709
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 7 cut(s) 236, 312, 1074, 1706, 1740, 1843, 1888
HspAI GCGC 1 cut(s) 2223
KflI GGGWCCC 1 cut(s) 1366
KspAI GTTAAC 1 cut(s) 2118
Kzo9I GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
LmnI GCTCC 3 cut(s) 44, 575, 1690
Lsp1109I GCAGC 5 cut(s) 238, 299, 334, 1565, 1747
LweI GCATC 5 cut(s) 156, 856, 1540, 1658, 1854
MaeI CTAG 9 cut(s) 248, 434, 653, 711, 728, 812, 875, 2096, 2181
MaeII ACGT 4 cut(s) 450, 777, 1410, 1709
MaeIII GTNAC 4 cut(s) 1509, 1586, 1732, 2072
MalI GATC 9 cut(s) 372, 393, 669, 681, 1599, 1883, 1929, 2100, 2185
MboI GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
MfeI CAATTG 1 cut(s) 1380
MflI RGATCY 1 cut(s) 2098
MhlI GDGCHC 6 cut(s) 568, 638, 742, 830, 874, 2043
MlyI GAGTC 5 cut(s) 56, 549, 1180, 1412, 2098
MmeI TCCRAC 1 cut(s) 2179
MroXI GAANNNNTTC 1 cut(s) 417
MseI TTAA 8 cut(s) 222, 243, 1499, 1634, 1787, 1797, 2028, 2117
MslI CAYNNNNRTG 4 cut(s) 174, 884, 1544, 2169
MspA1I CMGCKG 2 cut(s) 266, 527
MspI CCGG 3 cut(s) 20, 618, 823
MspR9I CCNGG 3 cut(s) 20, 133, 1191
MunI CAATTG 1 cut(s) 1380
Mva1269I GAATGC 2 cut(s) 115, 891
MvaI CCWGG 2 cut(s) 133, 1191
MvnI CGCG 2 cut(s) 74, 2225
MwoI GCNNNNNNNGC 3 cut(s) 14, 185, 284
NciI CCSGG 1 cut(s) 20
NdeII GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
NlaIII CATG 7 cut(s) 236, 312, 1074, 1706, 1740, 1843, 1888
NmuCI GTSAC 2 cut(s) 1732, 2072
NspI RCATGY 3 cut(s) 312, 1706, 1740
OliI CACNNNNGTG 1 cut(s) 1544
PagI TCATGA 1 cut(s) 1884
PceI AGGCCT 1 cut(s) 1893
PciI ACATGT 1 cut(s) 1736
PctI GAATGC 2 cut(s) 115, 891
PdmI GAANNNNTTC 1 cut(s) 417
PfeI GAWTC 9 cut(s) 930, 965, 1025, 1085, 1145, 1205, 1265, 1325, 1933
PflMI CCANNNNNTGG 1 cut(s) 157
PkrI GCNGC 7 cut(s) 7, 253, 289, 349, 529, 1555, 1762
PleI GAGTC 5 cut(s) 55, 548, 1180, 1411, 2097
PpsI GAGTC 5 cut(s) 55, 548, 1180, 1411, 2097
PpuMI RGGWCCY 3 cut(s) 1126, 1306, 1366
PscI ACATGT 1 cut(s) 1736
PshBI ATTAAT 1 cut(s) 2028
PsiI TTATAA 1 cut(s) 2009
Psp1406I AACGTT 1 cut(s) 1410
Psp5II RGGWCCY 3 cut(s) 1126, 1306, 1366
Psp6I CCWGG 2 cut(s) 131, 1189
PspGI CCWGG 2 cut(s) 131, 1189
PspPI GGNCC 8 cut(s) 16, 22, 81, 503, 808, 1126, 1306, 1366
PspPPI RGGWCCY 3 cut(s) 1126, 1306, 1366
PstI CTGCAG 3 cut(s) 1618, 1732, 2129
PstNI CAGNNNCTG 2 cut(s) 157, 1652
PsuI RGATCY 1 cut(s) 2098
PvuII CAGCTG 1 cut(s) 266
RsaI GTAC 7 cut(s) 784, 789, 798, 955, 1015, 1195, 2054
RsaNI GTAC 7 cut(s) 783, 788, 797, 954, 1014, 1194, 2053
RseI CAYNNNNRTG 4 cut(s) 174, 884, 1544, 2169
Rsr2I CGGWCCG 1 cut(s) 22
RsrII CGGWCCG 1 cut(s) 22
SaqAI TTAA 8 cut(s) 222, 243, 1499, 1634, 1787, 1797, 2028, 2117
SatI GCNGC 7 cut(s) 6, 252, 288, 348, 528, 1554, 1761
Sau3AI GATC 9 cut(s) 370, 391, 667, 679, 1597, 1881, 1927, 2098, 2183
Sau96I GGNCC 8 cut(s) 16, 22, 81, 503, 808, 1126, 1306, 1366
SchI GAGTC 5 cut(s) 56, 549, 1180, 1412, 2098
ScrFI CCNGG 3 cut(s) 20, 133, 1191
SduI GDGCHC 6 cut(s) 568, 638, 742, 830, 874, 2043
SfaNI GCATC 5 cut(s) 156, 856, 1540, 1658, 1854
SfcI CTRYAG 5 cut(s) 1372, 1614, 1653, 1728, 2125
SinI GGWCC 5 cut(s) 22, 808, 1126, 1306, 1366
SmiMI CAYNNNNRTG 4 cut(s) 174, 884, 1544, 2169
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
SseBI AGGCCT 1 cut(s) 1893
SsiI CCGC 6 cut(s) 5, 72, 92, 278, 367, 527
SspI AATATT 2 cut(s) 104, 1720
SspMI CTAG 9 cut(s) 248, 434, 653, 711, 728, 812, 875, 2096, 2181
StuI AGGCCT 1 cut(s) 1893
StyD4I CCNGG 3 cut(s) 18, 131, 1189
StyI CCWWGG 2 cut(s) 455, 1999
TaaI ACNGT 4 cut(s) 26, 173, 220, 787
TaiI ACGT 4 cut(s) 453, 780, 1413, 1712
TaqI TCGA 1 cut(s) 1898
TatI WGTACW 6 cut(s) 782, 787, 796, 953, 1013, 2052
TauI GCSGC 2 cut(s) 8, 530
TfiI GAWTC 9 cut(s) 930, 965, 1025, 1085, 1145, 1205, 1265, 1325, 1933
Tru1I TTAA 8 cut(s) 222, 243, 1499, 1634, 1787, 1797, 2028, 2117
Tru9I TTAA 8 cut(s) 222, 243, 1499, 1634, 1787, 1797, 2028, 2117
TscAI CASTG 1 cut(s) 1737
TseFI GTSAC 2 cut(s) 1732, 2072
TseI GCWGC 5 cut(s) 251, 287, 347, 1553, 1760
Tsp45I GTSAC 2 cut(s) 1732, 2072
TspDTI ATGAA 5 cut(s) 249, 459, 486, 571, 852
TspGWI ACGGA 1 cut(s) 690
TspRI CASTG 1 cut(s) 1737
Van91I CCANNNNNTGG 1 cut(s) 157
VneI GTGCAC 2 cut(s) 634, 870
VpaK11BI GGWCC 5 cut(s) 22, 808, 1126, 1306, 1366
VspI ATTAAT 1 cut(s) 2028
XapI RAATTY 5 cut(s) 984, 1044, 1104, 1164, 1284
XbaI TCTAGA 2 cut(s) 433, 2180
XceI RCATGY 3 cut(s) 312, 1706, 1740
XmiI GTMKAC 2 cut(s) 732, 1779
XmnI GAANNNNTTC 1 cut(s) 417
XspI CTAG 9 cut(s) 248, 434, 653, 711, 728, 812, 875, 2096, 2181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.