Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0011739

Physical Location & Seq

Genomic Coordinates Reverse (-)

58087492 .. 58092586

Gene Structure 5095 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00377510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGTTTCGAACCCCAATTTCCAGATTCGCCACACTTTTCAGAAACCCAAATCCCCATAAACTCTTACCCACAGACCCAATTCCCATATTCACGAAAAAAGCTCGGATCTTTGGCCCCAAACAAAAGCTCAAAATGCCATCCCAGCAAATCCTACCCATAACATACCACCCCCCATCTTCAAATCCCGCCACCACTGAAAAGCTACTAGTCAAATCTGAGGAGGACCCATCAACAAGGCTCCTCCTTTATTCACATTTCGAAGATGAAGAAAAGGCCGCGCCTTTGAAGCCCCTTCTTCCCAAGTCGGCGAGCTACACATTCAACACCTCCACCACCGCCGCCGCCGCCTCTGCCGCCGCAGGTTCTGCCAATAACAACCAGAAGCGGCGGCGCCGGACGGCTAGCGATAACTCGCTTTATTCGTCGTCATCCAATTCCTCATCGGAGGAGGGCGCTGCCGACCGCCACTCTATCGCCGGCGATGTGGAGCACGCCGCCGCCGAGACGTACTTGATCACCCGGCTGGGCTTGAAGCTCTTGAGCTATCTTGGGGTAGGCTACAGATGGATTACAAGATTTTTGGCCCTCGGTTGTTATTCGTTTTTACTTATGCCAGGGTTTATTCAAGTTGGCTATTACTATTTCTTCTCCAAGCAGGTCCGCAGAGGTATAGTTTATGGCGATCAACCAAGAAATAGGCTAGATCTGTATCTACCCAAAAATTCTGATGGGCCAAAACCAGTCATTGCATTTGTAACTGGTGGAGCCTGGATTATTGGTACAAAAGCATGGGGTTCTCTTTTAGGAATACAGTTATCAGAACGAGACATCATAGTGGCATGCATAGATTACAGAAATTTCCCTCAGGGTACTATCAGTGATATGGTACAGGATGCTTCTCAAGGCATCTCATTTGTATGTAATCATATTGCTGAATATGGAGGCGATCCTGATAGGGTTTATGTGATGGGACAATCAGCTGGTGCACATATTGGTGCATGCTCAATTGTTGACCAGGCAATCAAGGAGCTTGGTGAAGGAGAGAGCACTTCTTGGAGTGTTTCCCAGATAAAGGCTTACTTTGGTCTTTCTGGAGGGTACAATTTGTTTAATTTAGTAGATCACTTCCACAGTCGAGGCCTGTACCGTTCAATATTTTTAGGCATAATGGAAGGGGAGCATTCATTGCAACGTTTCTCTCCTGAAGTCATGATTCAGGACTCTAATGTTAGGAGTGCTGCTTCTCTTTTACCTCCTATTATTTTATTTCATGGTACTGCAGATTATTCCATACCATCAGATGCCAGTAAGAATTTTGCAGAAACTCTTCGGGGTCTTGGAGTGAAAGCTGAATCGATTCTGTATGAAGGGAAAACTCACACAGATTTGTTTCTTCAGGATCCAATGCGAGGTGGAAAAGATCAGATGTTTGAAGACTTAGTAGCTATCATTCATGAAGGTGATTCAGAGGCCCTTGCCAAAGATGCAGTGGCTCCACCAAGAAGGCGCCTTGTACCTGAGTTCATGTTGAAGTTGGCTCACAAAGTCAGCCCATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0008150 GO:0008152 GO:0009056 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010296 GO:0012505 GO:0016020 GO:0016787 GO:0016788 GO:0031090 GO:0031984 GO:0033993 GO:0042175 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051723 GO:0052689 GO:0097305 GO:0098588 GO:0098791 GO:0098827 GO:0140096 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00900 ko01120 ko01130 map00900 map01120 map01130

Pfam Domains

Protein Families

Abhydrolase_3 COesterase

Protein Analysis

519

Amino Acids

57.23

Weight (kDa)

8.62

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BD-FAE	PF20434	234 - 443	5.3e-28	BD-FAE
COesterase	PF00135	234 - 331	1.7e-11	Carboxylesterase family
Abhydrolase_3	PF07859	251 - 460	1.4e-13	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26120
fragaria_vesca	FvH4_4g28400 FvH4_4g28400 FvH4_4g28400
malus_domestica	MD13G1049700.v1.1 MD16G1050700.v1.1
prunus_persica	Prupe.1G302000_v2.0.a1
pyrus_communis	pycom13g04400 pycom16g04440
rosa_chinensis	RchiOBHm_Chr4g0436331
rosa_laevigata	RLG00000006526
rosa_multiflora	Rmu_sc0007205.1_g000008
rosa_roxburghii	Rroxscaffold_5G00377510
rosa_rugosa	Rorug04G0293200
rosa_samantha	Rh4AG347300 Rh4BG356200 Rh4CG370800 Rh4DG349900
rosa_wichuraiana	Rw4G030360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	350, 646
AccB1I	GGYRCC	2 cut(s)	390, 1506
AccII	CGCG	1 cut(s)	278
AclI	AACGTT	1 cut(s)	1192
AclWI	GGATC	4 cut(s)	113, 941, 1394, 1407
AcsI	RAATTY	3 cut(s)	721, 856, 1312
AcuI	CTGAAG	2 cut(s)	1224, 1379
AcyI	GRCGYC	2 cut(s)	391, 1507
AfaI	GTAC	8 cut(s)	509, 781, 871, 888, 1100, 1145, 1276, 1515
AfiI	CCNNNNNNNGG	2 cut(s)	1072, 1409
AgsI	TTSAA	8 cut(s)	180, 286, 322, 532, 626, 1152, 1433, 1531
AhlI	ACTAGT	1 cut(s)	205
AjnI	CCWGG	3 cut(s)	613, 767, 1014
Alw21I	GWGCWC	3 cut(s)	492, 988, 1049
Alw26I	GTCTC	2 cut(s)	497, 819
Alw44I	GTGCAC	1 cut(s)	984
AlwI	GGATC	4 cut(s)	113, 941, 1394, 1407
AlwNI	CAGNNNCTG	1 cut(s)	365
AoxI	GGCC	6 cut(s)	112, 273, 582, 731, 1138, 1470
ApaLI	GTGCAC	1 cut(s)	984
ApeKI	GCWGC	2 cut(s)	455, 1238
ApoI	RAATTY	3 cut(s)	721, 856, 1312
Asp700I	GAANNNNTTC	2 cut(s)	1326, 1356
AspLEI	GCGC	4 cut(s)	280, 393, 455, 1509
AspS9I	GGNCC	6 cut(s)	113, 223, 583, 658, 731, 1471
AsuC2I	CCSGG	1 cut(s)	520
AsuHPI	GGTGA	3 cut(s)	508, 1046, 1472
AsuII	TTCGAA	2 cut(s)	7, 258
AsuNHI	GCTAGC	1 cut(s)	401
AvaII	GGWCC	2 cut(s)	223, 658
AxyI	CCTNAGG	1 cut(s)	864
BaeGI	GKGCMC	1 cut(s)	988
BamHI	GGATCC	1 cut(s)	1399
BanI	GGYRCC	2 cut(s)	390, 1506
BbsI	GAAGAC	1 cut(s)	1440
Bbv12I	GWGCWC	3 cut(s)	492, 988, 1049
BbvI	GCAGC	2 cut(s)	442, 1225
BccI	CCATC	7 cut(s)	145, 181, 235, 558, 722, 961, 1303
BceAI	ACGGC	1 cut(s)	414
BciT130I	CCWGG	3 cut(s)	615, 769, 1016
BclI	TGATCA	1 cut(s)	513
BcnI	CCSGG	1 cut(s)	520
BcoDI	GTCTC	2 cut(s)	497, 819
BcuI	ACTAGT	1 cut(s)	205
BfaI	CTAG	4 cut(s)	206, 402, 701, 1558
BfmI	CTRYAG	2 cut(s)	559, 1278
BfoI	RGCGCY	3 cut(s)	394, 456, 1510
BfuAI	ACCTGC	2 cut(s)	350, 646
BglII	AGATCT	1 cut(s)	703
Bme1390I	CCNGG	4 cut(s)	520, 615, 769, 1016
Bme18I	GGWCC	2 cut(s)	223, 658
BmgT120I	GGNCC	6 cut(s)	113, 223, 583, 658, 731, 1471
BmiI	GGNNCC	8 cut(s)	115, 225, 239, 392, 766, 1401, 1494, 1508
BmrFI	CCNGG	4 cut(s)	520, 615, 769, 1016
BmsI	GCATC	4 cut(s)	883, 915, 1291, 1474
BmtI	GCTAGC	1 cut(s)	405
BpiI	GAAGAC	1 cut(s)	1440
BpmI	CTGGAG	1 cut(s)	1113
Bpu14I	TTCGAA	2 cut(s)	7, 258
BpuEI	CTTGAG	2 cut(s)	559, 885
BpuMI	CCSGG	1 cut(s)	520
Bsa29I	ATCGAT	1 cut(s)	1355
BsaBI	GATNNNNATC	1 cut(s)	708
BsaHI	GRCGYC	2 cut(s)	391, 1507
BsaJI	CCNNGG	2 cut(s)	586, 614
Bsc4I	CCNNNNNNNGG	2 cut(s)	1072, 1409
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	3 cut(s)	740, 763, 1305
Bse21I	CCTNAGG	1 cut(s)	864
Bse3DI	GCAATG	2 cut(s)	744, 1184
Bse8I	GATNNNNATC	1 cut(s)	708
BseBI	CCWGG	3 cut(s)	615, 769, 1016
BseCI	ATCGAT	1 cut(s)	1355
BseDI	CCNNGG	2 cut(s)	586, 614
BseGI	GGATG	3 cut(s)	137, 428, 898
BseJI	GATNNNNATC	1 cut(s)	708
BseLI	CCNNNNNNNGG	2 cut(s)	1072, 1409
BseMI	GCAATG	2 cut(s)	744, 1184
BseMII	CTCAG	3 cut(s)	207, 878, 1509
BseNI	ACTGG	3 cut(s)	740, 763, 1305
BseRI	GAGGAG	3 cut(s)	230, 233, 461
BseSI	GKGCMC	1 cut(s)	988
BseXI	GCAGC	2 cut(s)	442, 1225
BseYI	CCCAGC	2 cut(s)	141, 523
Bsh1236I	CGCG	1 cut(s)	278
Bsh1285I	CGRYCG	1 cut(s)	463
BshFI	GGCC	6 cut(s)	114, 275, 584, 733, 1140, 1472
BshNI	GGYRCC	2 cut(s)	390, 1506
BshVI	ATCGAT	1 cut(s)	1355
BsiEI	CGRYCG	1 cut(s)	463
BsiHKAI	GWGCWC	3 cut(s)	492, 988, 1049
BsiSI	CCGG	3 cut(s)	394, 477, 520
BslFI	GGGAC	1 cut(s)	984
BslI	CCNNNNNNNGG	2 cut(s)	1072, 1409
BsmAI	GTCTC	2 cut(s)	497, 819
BsmBI	CGTCTC	1 cut(s)	497
BsmFI	GGGAC	1 cut(s)	984
BsmI	GAATGC	1 cut(s)	1180
BsnI	GGCC	6 cut(s)	114, 275, 584, 733, 1140, 1472
Bsp119I	TTCGAA	2 cut(s)	7, 258
Bsp1286I	GDGCHC	3 cut(s)	492, 988, 1049
Bsp143I	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
BspANI	GGCC	6 cut(s)	114, 275, 584, 733, 1140, 1472
BspCNI	CTCAG	3 cut(s)	208, 877, 1510
BspDI	ATCGAT	1 cut(s)	1355
BspFNI	CGCG	1 cut(s)	278
BspHI	TCATGA	2 cut(s)	1209, 1453
BspLI	GGNNCC	8 cut(s)	115, 225, 239, 392, 766, 1401, 1494, 1508
BspMAI	CTGCAG	1 cut(s)	1282
BspMI	ACCTGC	2 cut(s)	350, 646
BspOI	GCTAGC	1 cut(s)	405
BspPI	GGATC	4 cut(s)	113, 941, 1394, 1407
BspT104I	TTCGAA	2 cut(s)	7, 258
BspT107I	GGYRCC	2 cut(s)	390, 1506
BsrDI	GCAATG	2 cut(s)	744, 1184
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	3 cut(s)	740, 763, 1305
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	2 cut(s)	586, 614
BssMI	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
BssNI	GRCGYC	2 cut(s)	391, 1507
Bst2UI	CCWGG	3 cut(s)	615, 769, 1016
Bst4CI	ACNGT	3 cut(s)	813, 1133, 1148
Bst6I	CTCTTC	1 cut(s)	1332
BstACI	GRCGYC	2 cut(s)	391, 1507
BstAPI	GCANNNNNTGC	2 cut(s)	365, 1186
BstBI	TTCGAA	2 cut(s)	7, 258
BstC8I	GCNNGC	6 cut(s)	310, 403, 478, 492, 841, 1000
BstDEI	CTNAG	4 cut(s)	216, 864, 1438, 1518
BstF5I	GGATG	3 cut(s)	137, 428, 898
BstFNI	CGCG	1 cut(s)	278
BstH2I	RGCGCY	3 cut(s)	394, 456, 1510
BstHHI	GCGC	4 cut(s)	280, 393, 455, 1509
BstKTI	GATC	8 cut(s)	108, 516, 685, 706, 949, 1123, 1402, 1423
BstMAI	GTCTC	2 cut(s)	497, 819
BstMBI	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
BstMCI	CGRYCG	1 cut(s)	463
BstMWI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 350, 353, 365, 1186, 1484
BstNI	CCWGG	3 cut(s)	615, 769, 1016
BstNSI	RCATGY	2 cut(s)	843, 1002
BstSCI	CCNGG	4 cut(s)	518, 613, 767, 1014
BstSFI	CTRYAG	2 cut(s)	559, 1278
BstSLI	GKGCMC	1 cut(s)	988
BstUI	CGCG	1 cut(s)	278
BstV1I	GCAGC	2 cut(s)	442, 1225
BstV2I	GAAGAC	1 cut(s)	1440
BstX2I	RGATCY	3 cut(s)	105, 703, 1399
BstYI	RGATCY	3 cut(s)	105, 703, 1399
Bsu15I	ATCGAT	1 cut(s)	1355
Bsu36I	CCTNAGG	1 cut(s)	864
BsuRI	GGCC	6 cut(s)	114, 275, 584, 733, 1140, 1472
BsuTUI	ATCGAT	1 cut(s)	1355
BtgZI	GCGATG	1 cut(s)	495
BtsCI	GGATG	3 cut(s)	137, 428, 898
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	3 cut(s)	192, 883, 1494
BveI	ACCTGC	2 cut(s)	350, 646
Cac8I	GCNNGC	6 cut(s)	310, 403, 478, 492, 841, 1000
CaiI	CAGNNNCTG	1 cut(s)	365
CciI	TCATGA	2 cut(s)	1209, 1453
CfoI	GCGC	4 cut(s)	280, 393, 455, 1509
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	6 cut(s)	113, 223, 583, 658, 731, 1471
ClaI	ATCGAT	1 cut(s)	1355
Csp6I	GTAC	8 cut(s)	508, 780, 870, 887, 1099, 1144, 1275, 1514
CviAII	CATG	7 cut(s)	789, 840, 999, 1210, 1271, 1454, 1525
CviQI	GTAC	8 cut(s)	508, 780, 870, 887, 1099, 1144, 1275, 1514
DdeI	CTNAG	4 cut(s)	216, 864, 1438, 1518
DinI	GGCGCC	2 cut(s)	392, 1508
DpnI	GATC	8 cut(s)	107, 515, 684, 705, 948, 1122, 1401, 1422
DpnII	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
Eam1104I	CTCTTC	1 cut(s)	1332
EarI	CTCTTC	1 cut(s)	1332
Eco147I	AGGCCT	1 cut(s)	1140
Eco47I	GGWCC	2 cut(s)	223, 658
Eco57I	CTGAAG	2 cut(s)	1224, 1379
Eco81I	CCTNAGG	1 cut(s)	864
EcoO109I	RGGNCCY	2 cut(s)	223, 1471
EcoRII	CCWGG	3 cut(s)	613, 767, 1014
EcoT22I	ATGCAT	1 cut(s)	845
EgeI	GGCGCC	2 cut(s)	392, 1508
EheI	GGCGCC	2 cut(s)	392, 1508
Esp3I	CGTCTC	1 cut(s)	497
FaeI	CATG	7 cut(s)	792, 843, 1002, 1213, 1274, 1457, 1528
FalI	AAGNNNNNCTT	2 cut(s)	1064, 1096
FaqI	GGGAC	1 cut(s)	984
FatI	CATG	7 cut(s)	788, 839, 998, 1209, 1270, 1453, 1524
FauI	CCCGC	1 cut(s)	193
FbaI	TGATCA	1 cut(s)	513
FokI	GGATG	3 cut(s)	124, 415, 905
FspBI	CTAG	4 cut(s)	206, 402, 701, 1558
GlaI	GCGC	4 cut(s)	279, 392, 454, 1508
GsaI	CCCAGC	2 cut(s)	145, 527
GsuI	CTGGAG	1 cut(s)	1113
HaeII	RGCGCY	3 cut(s)	394, 456, 1510
HaeIII	GGCC	6 cut(s)	114, 275, 584, 733, 1140, 1472
HapII	CCGG	3 cut(s)	394, 477, 520
HhaI	GCGC	4 cut(s)	280, 393, 455, 1509
Hin1I	GRCGYC	2 cut(s)	391, 1507
Hin1II	CATG	7 cut(s)	792, 843, 1002, 1213, 1274, 1457, 1528
Hin6I	GCGC	4 cut(s)	278, 391, 453, 1507
HinP1I	GCGC	4 cut(s)	278, 391, 453, 1507
HincII	GTYRAC	1 cut(s)	1012
HindII	GTYRAC	1 cut(s)	1012
HinfI	GANTC	6 cut(s)	24, 1213, 1220, 1352, 1357, 1463
HpaII	CCGG	3 cut(s)	394, 477, 520
HphI	GGTGA	3 cut(s)	508, 1046, 1472
Hpy166II	GTNNAC	2 cut(s)	986, 1012
Hpy188I	TCNGA	9 cut(s)	41, 105, 217, 445, 727, 820, 1300, 1425, 1468
Hpy8I	GTNNAC	2 cut(s)	986, 1012
Hpy99I	CGWCG	1 cut(s)	427
HpyAV	CCTTC	6 cut(s)	302, 1031, 1166, 1361, 1451, 1497
HpyCH4III	ACNGT	3 cut(s)	813, 1133, 1148
HpyCH4IV	ACGT	2 cut(s)	506, 1192
HpyCH4V	TGCA	8 cut(s)	749, 843, 986, 998, 1189, 1280, 1319, 1487
HpyF10VI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 350, 353, 365, 1186, 1484
HpyF3I	CTNAG	4 cut(s)	216, 864, 1438, 1518
HpySE526I	ACGT	2 cut(s)	506, 1192
Hsp92I	GRCGYC	2 cut(s)	391, 1507
Hsp92II	CATG	7 cut(s)	792, 843, 1002, 1213, 1274, 1457, 1528
HspAI	GCGC	4 cut(s)	278, 391, 453, 1507
KasI	GGCGCC	2 cut(s)	390, 1506
KroI	GCCGGC	1 cut(s)	476
KroNI	GCCGGC	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	513
Kzo9I	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
LmnI	GCTCC	6 cut(s)	243, 487, 764, 1027, 1177, 1498
Lsp1109I	GCAGC	2 cut(s)	442, 1225
LweI	GCATC	4 cut(s)	883, 915, 1291, 1474
MaeI	CTAG	4 cut(s)	206, 402, 701, 1558
MaeII	ACGT	2 cut(s)	506, 1192
MaeIII	GTNAC	1 cut(s)	754
MalI	GATC	8 cut(s)	107, 515, 684, 705, 948, 1122, 1401, 1422
MboI	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
MboII	GAAGA	8 cut(s)	168, 272, 278, 287, 637, 1319, 1385, 1445
MfeI	CAATTG	1 cut(s)	1005
MflI	RGATCY	3 cut(s)	105, 703, 1399
MhlI	GDGCHC	3 cut(s)	492, 988, 1049
MluCI	AATT	9 cut(s)	15, 78, 433, 721, 856, 1005, 1102, 1111, 1312
Mly113I	GGCGCC	2 cut(s)	391, 1507
MlyI	GAGTC	1 cut(s)	1214
Mph1103I	ATGCAT	1 cut(s)	845
MreI	CGCCGGCG	1 cut(s)	476
MroNI	GCCGGC	1 cut(s)	476
MroXI	GAANNNNTTC	2 cut(s)	1326, 1356
MseI	TTAA	1 cut(s)	1110
MslI	CAYNNNNRTG	4 cut(s)	833, 916, 993, 1458
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	3 cut(s)	394, 477, 520
MspR9I	CCNGG	4 cut(s)	520, 615, 769, 1016
MunI	CAATTG	1 cut(s)	1005
Mva1269I	GAATGC	1 cut(s)	1180
MvaI	CCWGG	3 cut(s)	615, 769, 1016
MvnI	CGCG	1 cut(s)	278
MwoI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 350, 353, 365, 1186, 1484
NaeI	GCCGGC	1 cut(s)	478
NarI	GGCGCC	2 cut(s)	391, 1507
NciI	CCSGG	1 cut(s)	520
NdeII	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
NgoMIV	GCCGGC	1 cut(s)	476
NheI	GCTAGC	1 cut(s)	401
NlaIII	CATG	7 cut(s)	792, 843, 1002, 1213, 1274, 1457, 1528
NlaIV	GGNNCC	8 cut(s)	115, 225, 239, 392, 766, 1401, 1494, 1508
NmeAIII	GCCGAG	1 cut(s)	526
NsiI	ATGCAT	1 cut(s)	845
NspI	RCATGY	2 cut(s)	843, 1002
NspV	TTCGAA	2 cut(s)	7, 258
PaeI	GCATGC	2 cut(s)	843, 1002
PagI	TCATGA	2 cut(s)	1209, 1453
PceI	AGGCCT	1 cut(s)	1140
PcsI	WCGNNNNNNNCGW	2 cut(s)	419, 498
PctI	GAATGC	1 cut(s)	1180
PdiI	GCCGGC	1 cut(s)	478
PdmI	GAANNNNTTC	2 cut(s)	1326, 1356
PfeI	GAWTC	5 cut(s)	24, 1213, 1352, 1357, 1463
PleI	GAGTC	1 cut(s)	1214
PluTI	GGCGCC	2 cut(s)	394, 1510
PpsI	GAGTC	1 cut(s)	1214
PpuMI	RGGWCCY	1 cut(s)	223
Psp1406I	AACGTT	1 cut(s)	1192
Psp5II	RGGWCCY	1 cut(s)	223
Psp6I	CCWGG	3 cut(s)	613, 767, 1014
PspFI	CCCAGC	2 cut(s)	141, 523
PspGI	CCWGG	3 cut(s)	613, 767, 1014
PspN4I	GGNNCC	8 cut(s)	115, 225, 239, 392, 766, 1401, 1494, 1508
PspPI	GGNCC	6 cut(s)	113, 223, 583, 658, 731, 1471
PspPPI	RGGWCCY	1 cut(s)	223
PstI	CTGCAG	1 cut(s)	1282
PstNI	CAGNNNCTG	1 cut(s)	365
PsuI	RGATCY	3 cut(s)	105, 703, 1399
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	8 cut(s)	509, 781, 871, 888, 1100, 1145, 1276, 1515
RsaNI	GTAC	8 cut(s)	508, 780, 870, 887, 1099, 1144, 1275, 1514
RseI	CAYNNNNRTG	4 cut(s)	833, 916, 993, 1458
SaqAI	TTAA	1 cut(s)	1110
Sau3AI	GATC	8 cut(s)	105, 513, 682, 703, 946, 1120, 1399, 1420
Sau96I	GGNCC	6 cut(s)	113, 223, 583, 658, 731, 1471
SchI	GAGTC	1 cut(s)	1214
ScrFI	CCNGG	4 cut(s)	520, 615, 769, 1016
SduI	GDGCHC	3 cut(s)	492, 988, 1049
SfaNI	GCATC	4 cut(s)	883, 915, 1291, 1474
SfcI	CTRYAG	2 cut(s)	559, 1278
SfoI	GGCGCC	2 cut(s)	392, 1508
SfuI	TTCGAA	2 cut(s)	7, 258
SgrAI	CRCCGGYG	1 cut(s)	476
SinI	GGWCC	2 cut(s)	223, 658
SmiMI	CAYNNNNRTG	4 cut(s)	833, 916, 993, 1458
SmlI	CTYRAG	2 cut(s)	538, 900
SmoI	CTYRAG	2 cut(s)	538, 900
SpeI	ACTAGT	1 cut(s)	205
SphI	GCATGC	2 cut(s)	843, 1002
Sse9I	AATT	9 cut(s)	15, 78, 433, 721, 856, 1005, 1102, 1111, 1312
SseBI	AGGCCT	1 cut(s)	1140
SspDI	GGCGCC	2 cut(s)	390, 1506
SspI	AATATT	1 cut(s)	1155
SspMI	CTAG	4 cut(s)	206, 402, 701, 1558
StuI	AGGCCT	1 cut(s)	1140
StyD4I	CCNGG	4 cut(s)	518, 613, 767, 1014
TaaI	ACNGT	3 cut(s)	813, 1133, 1148
TaiI	ACGT	2 cut(s)	509, 1195
TaqI	TCGA	4 cut(s)	7, 258, 1135, 1355
TasI	AATT	9 cut(s)	15, 78, 433, 721, 856, 1005, 1102, 1111, 1312
TfiI	GAWTC	5 cut(s)	24, 1213, 1352, 1357, 1463
Tru1I	TTAA	1 cut(s)	1110
Tru9I	TTAA	1 cut(s)	1110
TscAI	CASTG	3 cut(s)	199, 883, 1494
TseI	GCWGC	2 cut(s)	455, 1238
TspDTI	ATGAA	7 cut(s)	279, 1173, 1259, 1380, 1442, 1470, 1513
TspRI	CASTG	3 cut(s)	199, 883, 1494
VneI	GTGCAC	1 cut(s)	984
VpaK11BI	GGWCC	2 cut(s)	223, 658
XapI	RAATTY	3 cut(s)	721, 856, 1312
XceI	RCATGY	2 cut(s)	843, 1002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1486
XmnI	GAANNNNTTC	2 cut(s)	1326, 1356
XspI	CTAG	4 cut(s)	206, 402, 701, 1558
Zsp2I	ATGCAT	1 cut(s)	845

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.