Rroxscaffold_5G00383720

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0011272
Physical Location & Seq
Reverse (-)
63324113 .. 63326911
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00383720.1

Sequence Viewer

Length: 1542 bp
ATGGACTCCAAGTCGGTGCGGTTCTTGACCCACCAGTCCTTCTTCTCCGCCGTTCGATCCGGCGACCTCGAGCCGGTGACGCAGCTGGTGGAGAAGCTCGCCAAGGACGGCCAGCCGTCGTCGTCCGCCGTGGCTGATCTGATGGCGATGAAGAACGACGCAGGCGAGACGGCGCTGTACGTGGCCGCAGACAATAATCTGGAGGAGGTGTTTGCGTACTTGCTCAAGTTCTGTGATGTGGAGGTTGCCAAGATCAGGAACAAGCTTGATATGAATGCTTTTCATGTTGCTGCTAAGAAAGGCCATTTGGGTATTGTGAAGGCGCTGCTGGCAAAATGGCCTGAGCTGTGTAAAGTGTGTGACTCGTCAAACACTAGCCCTCTTTATTCAGCTGCTGTTCAGGAACATTTGGATGTAGTCAACACCATCTTGGATGCGGACATCAGCTCAGTGAGGATTGTGAGGAAAATGATTGGGGAAGCGCTTATTGATAGAGATCCTGAAATAGTGTGTATAAAGGATAAAAAGGGTCAAACTGCACTCCATATGGCTGTAAAAGGTGACTGCACTTCAATTGTAGAGGAGATATTACTTGCTGATCACTCTATACTTAACGAACGTGACAAGAAAGGCAATACCGCTTTGCATATGGCAACAAGGAAATGCCGTCCAGAGATAGTGAGCCTTCTGTTGAGTTTCAAGGATACTGATGTCAATGCAATCAATAATCATCACGAAACTGCCAGGGATTTGGCAGATAAACTACAATATGGAGGTTCTCGATCAGAAATTATAGAAGCACTGGTGGAAGTTGGTGGCAAGTATGCAAGACATGTTGGCCAAGTGGATGAAGCAATGTTACTCAAGAGAGCTGTGAGTGATATTAAGCATGAGGTGCACTCACAGTTGATACAAAATGAAACAACTCGGCGAAGAGTTTCTGGTATTGCCAAAGAACTAAAGAAACTTCATAGAGAAGCTGTCCAGAGCACTACCAATTCTATCACAGTCGTTGCTGTTCTTTTTGCTTCGATAGCCTTCTTGGCCATATTTAACTTGCCTGGCCAATATATCGAAACAGGGGAGGCTAAAATAGCCGATGAAGTTGGTTTCCAAGTGTTCTACCTATTGAATGCCACAGCTCTCTTCATTTCTCTGGCGGTCGTTGTGGTTCAGATCACTTTGGTGGCTTGGGACACAAGGGCTCAGCAGCAAGTTGTATCAGTGGTCAACAAACTAATGTGGGCTGCTTGTGCATGCACTTGCGGGGCTTTTCTGTCGATAGCTTTCGTGGTTGTTGGAAAAGGTAGTTCATGGATGGCCATTACAATAACAGCTGTGGGAGCACCAATCCTCATTGGCACTCTTGCGAGCATGTGCTACTTTGTTTTCCGACAACACTTTGGGTCTTTCCGGCGTGACTCTCAGAGAAACATCAGAAGGGCGAGTGGAAGCAAGTCGTTCTCCTGGTCCTACTCTGCAAATATCTCAGATCTCGACGATGAATATAACTCCGACCTTGAGAAAATCTATGCTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

513

Amino Acids

56.42

Weight (kDa)

6.71

Isoelectric Point (pI)

34.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 86 - 148 3.4e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 87 - 128 3.9e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 162 - 218 7.3e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 171 - 240 3.6e-12 Ankyrin repeats (3 copies)
PGG PF13962 326 - 431 3.9e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011272)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01680
fragaria_vesca FvH4_4g33630 FvH4_4g33630 FvH4_4g33630 FvH4_4g33630
malus_domestica MD13G1020700.v1.1 MD16G1019100.v1.1
prunus_persica Prupe.1G333000_v2.0.a1
pyrus_communis pycom11g04200 pycom13g01760 pycom16g01710
rosa_chinensis RchiOBHm_Chr4g0443091
rosa_laevigata RLG00000005954
rosa_roxburghii Rroxscaffold_5G00383720
rosa_rugosa Rorug04G0344300
rosa_samantha Rh4AG398700 Rh4BG410200 Rh4CG425700 Rh4DG405100
rosa_wichuraiana Rw4G034360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 34
AciI CCGC 8 cut(s) 19, 48, 126, 186, 437, 639, 1160, 1266
AclWI GGATC 2 cut(s) 51, 491
AcoI YGGCCR 6 cut(s) 109, 183, 838, 1044, 1063, 1320
AfaI GTAC 2 cut(s) 179, 218
AfeI AGCGCT 1 cut(s) 483
AfiI CCNNNNNNNGG 2 cut(s) 73, 255
AflIII ACRYGT 1 cut(s) 832
AgsI TTSAA 3 cut(s) 573, 700, 1132
AhdI GACNNNNNGTC 1 cut(s) 10
AjnI CCWGG 3 cut(s) 743, 1060, 1466
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AleI CACNNNNGTG 1 cut(s) 1184
Alw21I GWGCWC 3 cut(s) 900, 992, 1348
Alw26I GTCTC 1 cut(s) 161
Alw44I GTGCAC 1 cut(s) 896
AlwI GGATC 2 cut(s) 51, 491
AlwNI CAGNNNCTG 1 cut(s) 395
Ama87I CYCGRG 1 cut(s) 68
Aor51HI AGCGCT 1 cut(s) 483
AoxI GGCC 8 cut(s) 109, 183, 301, 338, 838, 1044, 1063, 1320
ApaLI GTGCAC 1 cut(s) 896
ApeKI GCWGC 6 cut(s) 82, 290, 325, 392, 1210, 1247
Asp700I GAANNNNTTC 1 cut(s) 937
AspLEI GCGC 3 cut(s) 175, 325, 484
AspS9I GGNCC 1 cut(s) 1470
AsuHPI GGTGA 2 cut(s) 88, 572
AvaI CYCGRG 1 cut(s) 68
AvaII GGWCC 1 cut(s) 1470
BaeGI GKGCMC 1 cut(s) 900
BaeI ACNNNNGTAYC 2 cut(s) 696, 729
BalI TGGCCA 4 cut(s) 840, 1046, 1065, 1322
BanII GRGCYC 1 cut(s) 1207
BarI GAAGNNNNNNTAC 2 cut(s) 843, 875
Bbv12I GWGCWC 3 cut(s) 900, 992, 1348
BbvI GCAGC 6 cut(s) 94, 277, 312, 379, 1222, 1234
BccI CCATC 3 cut(s) 136, 434, 1312
BceAI ACGGC 6 cut(s) 35, 100, 113, 124, 186, 651
BciT130I CCWGG 3 cut(s) 745, 1062, 1468
BciVI GTATCC 1 cut(s) 697
BclI TGATCA 1 cut(s) 598
BcoDI GTCTC 1 cut(s) 161
BfaI CTAG 1 cut(s) 375
BfoI RGCGCY 3 cut(s) 176, 326, 485
BfuI GTATCC 1 cut(s) 697
BglI GCCNNNNNGGC 1 cut(s) 1043
BglII AGATCT 1 cut(s) 1492
BisI GCNGC 7 cut(s) 83, 186, 291, 326, 393, 1211, 1248
BlpI GCTNAGC 1 cut(s) 1206
BlsI GCNGC 7 cut(s) 84, 187, 292, 327, 394, 1212, 1249
Bme1390I CCNGG 3 cut(s) 745, 1062, 1468
Bme18I GGWCC 1 cut(s) 1470
BmeRI GACNNNNNGTC 1 cut(s) 10
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 1470
BmrFI CCNGG 3 cut(s) 745, 1062, 1468
BmsI GCATC 1 cut(s) 424
BplI GAGNNNNNCTC 2 cut(s) 884, 916
BpmI CTGGAG 1 cut(s) 221
Bpu10I CCTNAGC 1 cut(s) 342
Bpu1102I GCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 3 cut(s) 209, 848, 1541
BsaAI YACGTR 1 cut(s) 181
BsaBI GATNNNNATC 1 cut(s) 495
BsaJI CCNNGG 3 cut(s) 102, 129, 744
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 255
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 2 cut(s) 34, 807
Bse3DI GCAATG 1 cut(s) 861
Bse8I GATNNNNATC 1 cut(s) 495
BseBI CCWGG 3 cut(s) 745, 1062, 1468
BseDI CCNNGG 3 cut(s) 102, 129, 744
BseGI GGATG 4 cut(s) 418, 439, 853, 1323
BseJI GATNNNNATC 1 cut(s) 495
BseLI CCNNNNNNNGG 2 cut(s) 73, 255
BseMI GCAATG 1 cut(s) 861
BseMII CTCAG 5 cut(s) 333, 462, 1220, 1439, 1503
BseNI ACTGG 2 cut(s) 34, 807
BseRI GAGGAG 2 cut(s) 218, 596
BseSI GKGCMC 1 cut(s) 900
BseXI GCAGC 6 cut(s) 94, 277, 312, 379, 1222, 1234
BsgI GTGCAG 2 cut(s) 522, 550
Bsh1285I CGRYCG 1 cut(s) 1164
BshFI GGCC 8 cut(s) 111, 185, 303, 340, 840, 1046, 1065, 1322
BsiEI CGRYCG 1 cut(s) 1164
BsiHKAI GWGCWC 3 cut(s) 900, 992, 1348
BsiHKCI CYCGRG 1 cut(s) 68
BsiSI CCGG 3 cut(s) 60, 74, 1414
BslFI GGGAC 1 cut(s) 1208
BslI CCNNNNNNNGG 2 cut(s) 73, 255
BsmAI GTCTC 1 cut(s) 161
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 1 cut(s) 1208
BsmI GAATGC 2 cut(s) 280, 1138
BsnI GGCC 8 cut(s) 111, 185, 303, 340, 840, 1046, 1065, 1322
BsoBI CYCGRG 1 cut(s) 68
Bsp1286I GDGCHC 4 cut(s) 900, 992, 1207, 1348
Bsp143I GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
Bsp1720I GCTNAGC 1 cut(s) 1206
BspACI CCGC 8 cut(s) 19, 48, 126, 186, 437, 639, 1160, 1266
BspANI GGCC 8 cut(s) 111, 185, 303, 340, 840, 1046, 1065, 1322
BspCNI CTCAG 5 cut(s) 334, 461, 1219, 1438, 1502
BspPI GGATC 2 cut(s) 51, 491
BsrDI GCAATG 1 cut(s) 861
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 2 cut(s) 34, 807
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 3 cut(s) 102, 129, 744
BssMI GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 3 cut(s) 745, 1062, 1468
Bst4CI ACNGT 2 cut(s) 906, 1009
Bst6I CTCTTC 2 cut(s) 928, 1151
BstAPI GCANNNNNTGC 1 cut(s) 895
BstBAI YACGTR 1 cut(s) 181
BstC8I GCNNGC 6 cut(s) 99, 113, 163, 330, 1258, 1372
BstDEI CTNAG 6 cut(s) 294, 342, 448, 1206, 1425, 1489
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 4 cut(s) 418, 439, 853, 1323
BstH2I RGCGCY 3 cut(s) 176, 326, 485
BstHHI GCGC 3 cut(s) 175, 325, 484
BstKTI GATC 8 cut(s) 59, 139, 255, 499, 601, 785, 1179, 1495
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
BstMCI CGRYCG 1 cut(s) 1164
BstMWI GCNNNNNNNGC 8 cut(s) 79, 329, 895, 1034, 1043, 1094, 1253, 1343
BstNI CCWGG 3 cut(s) 745, 1062, 1468
BstNSI RCATGY 3 cut(s) 836, 1260, 1378
BstSCI CCNGG 3 cut(s) 743, 1060, 1466
BstSLI GKGCMC 1 cut(s) 900
BstV1I GCAGC 6 cut(s) 94, 277, 312, 379, 1222, 1234
BstX2I RGATCY 2 cut(s) 496, 1492
BstXI CCANNNNNNTGG 1 cut(s) 751
BstYI RGATCY 2 cut(s) 496, 1492
BsuI GTATCC 1 cut(s) 697
BsuRI GGCC 8 cut(s) 111, 185, 303, 340, 840, 1046, 1065, 1322
BtgI CCRYGG 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 161
BtsCI GGATG 4 cut(s) 418, 439, 853, 1323
BtsIMutI CAGTG 3 cut(s) 456, 800, 1230
Cac8I GCNNGC 6 cut(s) 99, 113, 163, 330, 1258, 1372
CaiI CAGNNNCTG 1 cut(s) 395
CfoI GCGC 3 cut(s) 175, 325, 484
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 1470
CseI GACGC 2 cut(s) 88, 167
Csp6I GTAC 2 cut(s) 178, 217
CviAII CATG 6 cut(s) 284, 833, 890, 1257, 1314, 1375
CviQI GTAC 2 cut(s) 178, 217
DdeI CTNAG 6 cut(s) 294, 342, 448, 1206, 1425, 1489
DpnI GATC 8 cut(s) 58, 138, 254, 498, 600, 784, 1178, 1494
DpnII GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
DrdI GACNNNNNNGTC 1 cut(s) 34
DriI GACNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 34
EaeI YGGCCR 6 cut(s) 109, 183, 838, 1044, 1063, 1320
Eam1104I CTCTTC 2 cut(s) 928, 1151
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 2 cut(s) 928, 1151
EciI GGCGGA 2 cut(s) 37, 115
Eco130I CCWWGG 1 cut(s) 102
Eco24I GRGCYC 1 cut(s) 1207
Eco47I GGWCC 1 cut(s) 1470
Eco47III AGCGCT 1 cut(s) 483
Eco88I CYCGRG 1 cut(s) 68
EcoRII CCWGG 3 cut(s) 743, 1060, 1466
EcoT14I CCWWGG 1 cut(s) 102
EcoT38I GRGCYC 1 cut(s) 1207
ErhI CCWWGG 1 cut(s) 102
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 6 cut(s) 287, 836, 893, 1260, 1317, 1378
FaqI GGGAC 1 cut(s) 1208
FatI CATG 6 cut(s) 283, 832, 889, 1256, 1313, 1374
FauI CCCGC 1 cut(s) 1259
FauNDI CATATG 2 cut(s) 546, 648
FbaI TGATCA 1 cut(s) 598
Fnu4HI GCNGC 7 cut(s) 83, 186, 291, 326, 393, 1211, 1248
FokI GGATG 4 cut(s) 425, 446, 860, 1330
FriOI GRGCYC 1 cut(s) 1207
Fsp4HI GCNGC 7 cut(s) 83, 186, 291, 326, 393, 1211, 1248
FspBI CTAG 1 cut(s) 375
GlaI GCGC 3 cut(s) 174, 324, 483
GluI GCNGC 7 cut(s) 83, 186, 291, 326, 393, 1211, 1248
GsuI CTGGAG 1 cut(s) 221
HaeII RGCGCY 3 cut(s) 176, 326, 485
HaeIII GGCC 8 cut(s) 111, 185, 303, 340, 840, 1046, 1065, 1322
HapII CCGG 3 cut(s) 60, 74, 1414
HgaI GACGC 2 cut(s) 88, 167
HhaI GCGC 3 cut(s) 175, 325, 484
Hin1II CATG 6 cut(s) 287, 836, 893, 1260, 1317, 1378
Hin6I GCGC 3 cut(s) 173, 323, 482
HinP1I GCGC 3 cut(s) 173, 323, 482
HincII GTYRAC 2 cut(s) 421, 1231
HindII GTYRAC 2 cut(s) 421, 1231
HindIII AAGCTT 1 cut(s) 263
HinfI GANTC 3 cut(s) 5, 362, 1421
HpaII CCGG 3 cut(s) 60, 74, 1414
HphI GGTGA 2 cut(s) 88, 572
Hpy166II GTNNAC 3 cut(s) 421, 898, 1231
Hpy188I TCNGA 8 cut(s) 141, 787, 1176, 1394, 1428, 1439, 1492, 1516
Hpy8I GTNNAC 3 cut(s) 421, 898, 1231
Hpy99I CGWCG 4 cut(s) 121, 124, 161, 1502
HpyAV CCTTC 5 cut(s) 49, 313, 695, 1048, 1434
HpyCH4III ACNGT 2 cut(s) 906, 1009
HpyCH4IV ACGT 2 cut(s) 180, 619
HpyCH4V TGCA 9 cut(s) 539, 567, 646, 719, 827, 898, 1256, 1260, 1481
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 329, 895, 1034, 1043, 1094, 1253, 1343
HpyF3I CTNAG 6 cut(s) 294, 342, 448, 1206, 1425, 1489
HpySE526I ACGT 2 cut(s) 180, 619
Hsp92II CATG 6 cut(s) 287, 836, 893, 1260, 1317, 1378
HspAI GCGC 3 cut(s) 173, 323, 482
Ksp22I TGATCA 1 cut(s) 598
Kzo9I GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
LmnI GCTCC 1 cut(s) 1343
Lsp1109I GCAGC 6 cut(s) 94, 277, 312, 379, 1222, 1234
LweI GCATC 1 cut(s) 424
MaeI CTAG 1 cut(s) 375
MaeII ACGT 2 cut(s) 180, 619
MaeIII GTNAC 6 cut(s) 76, 359, 560, 620, 858, 1418
MalI GATC 8 cut(s) 58, 138, 254, 498, 600, 784, 1178, 1494
MboI GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
MboII GAAGA 4 cut(s) 34, 163, 945, 1138
MfeI CAATTG 1 cut(s) 573
MflI RGATCY 2 cut(s) 496, 1492
MhlI GDGCHC 4 cut(s) 900, 992, 1207, 1348
MlsI TGGCCA 4 cut(s) 840, 1046, 1065, 1322
MluCI AATT 3 cut(s) 573, 789, 997
MluNI TGGCCA 4 cut(s) 840, 1046, 1065, 1322
MlyI GAGTC 2 cut(s) 356, 1415
MmeI TCCRAC 3 cut(s) 1279, 1417, 1539
Mox20I TGGCCA 4 cut(s) 840, 1046, 1065, 1322
MroXI GAANNNNTTC 1 cut(s) 937
MscI TGGCCA 4 cut(s) 840, 1046, 1065, 1322
MseI TTAA 3 cut(s) 612, 885, 1053
MslI CAYNNNNRTG 2 cut(s) 411, 1184
Msp20I TGGCCA 4 cut(s) 840, 1046, 1065, 1322
MspA1I CMGCKG 3 cut(s) 85, 392, 1337
MspI CCGG 3 cut(s) 60, 74, 1414
MspR9I CCNGG 3 cut(s) 745, 1062, 1468
MunI CAATTG 1 cut(s) 573
Mva1269I GAATGC 2 cut(s) 280, 1138
MvaI CCWGG 3 cut(s) 745, 1062, 1468
MwoI GCNNNNNNNGC 8 cut(s) 79, 329, 895, 1034, 1043, 1094, 1253, 1343
NdeI CATATG 2 cut(s) 546, 648
NdeII GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
NlaIII CATG 6 cut(s) 287, 836, 893, 1260, 1317, 1378
NmeAIII GCCGAG 1 cut(s) 907
NmuCI GTSAC 5 cut(s) 76, 359, 560, 620, 1418
NspI RCATGY 3 cut(s) 836, 1260, 1378
OliI CACNNNNGTG 1 cut(s) 1184
PaeI GCATGC 1 cut(s) 1260
PaeR7I CTCGAG 1 cut(s) 68
PciI ACATGT 1 cut(s) 832
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 2 cut(s) 280, 1138
PdmI GAANNNNTTC 1 cut(s) 937
PkrI GCNGC 7 cut(s) 84, 187, 292, 327, 394, 1212, 1249
PleI GAGTC 2 cut(s) 356, 1415
PpsI GAGTC 2 cut(s) 356, 1415
Ppu21I YACGTR 1 cut(s) 181
PscI ACATGT 1 cut(s) 832
Psp6I CCWGG 3 cut(s) 743, 1060, 1466
PspGI CCWGG 3 cut(s) 743, 1060, 1466
PspPI GGNCC 1 cut(s) 1470
PspXI VCTCGAGB 1 cut(s) 68
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 2 cut(s) 496, 1492
PvuII CAGCTG 3 cut(s) 85, 392, 1337
RsaI GTAC 2 cut(s) 179, 218
RsaNI GTAC 2 cut(s) 178, 217
RseI CAYNNNNRTG 2 cut(s) 411, 1184
SaqAI TTAA 3 cut(s) 612, 885, 1053
SatI GCNGC 7 cut(s) 83, 186, 291, 326, 393, 1211, 1248
Sau3AI GATC 8 cut(s) 56, 136, 252, 496, 598, 782, 1176, 1492
Sau96I GGNCC 1 cut(s) 1470
SchI GAGTC 2 cut(s) 356, 1415
ScrFI CCNGG 3 cut(s) 745, 1062, 1468
SduI GDGCHC 4 cut(s) 900, 992, 1207, 1348
SfaNI GCATC 1 cut(s) 424
Sfr274I CTCGAG 1 cut(s) 68
SinI GGWCC 1 cut(s) 1470
SlaI CTCGAG 1 cut(s) 68
SmiMI CAYNNNNRTG 2 cut(s) 411, 1184
SmlI CTYRAG 4 cut(s) 68, 224, 863, 1520
SmoI CTYRAG 4 cut(s) 68, 224, 863, 1520
SphI GCATGC 1 cut(s) 1260
Sse9I AATT 3 cut(s) 573, 789, 997
SsiI CCGC 8 cut(s) 19, 48, 126, 186, 437, 639, 1160, 1266
SspMI CTAG 1 cut(s) 375
StyD4I CCNGG 3 cut(s) 743, 1060, 1466
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 2 cut(s) 906, 1009
TaiI ACGT 2 cut(s) 183, 622
TaqI TCGA 7 cut(s) 55, 69, 781, 1031, 1074, 1280, 1497
TasI AATT 3 cut(s) 573, 789, 997
TauI GCSGC 1 cut(s) 188
Tru1I TTAA 3 cut(s) 612, 885, 1053
Tru9I TTAA 3 cut(s) 612, 885, 1053
TscAI CASTG 3 cut(s) 456, 807, 1230
TseFI GTSAC 5 cut(s) 76, 359, 560, 620, 1418
TseI GCWGC 6 cut(s) 82, 290, 325, 392, 1210, 1247
Tsp45I GTSAC 5 cut(s) 76, 359, 560, 620, 1418
TspRI CASTG 3 cut(s) 456, 807, 1230
VneI GTGCAC 1 cut(s) 896
VpaK11BI GGWCC 1 cut(s) 1470
XceI RCATGY 3 cut(s) 836, 1260, 1378
XhoI CTCGAG 1 cut(s) 68
XmnI GAANNNNTTC 1 cut(s) 937
XspI CTAG 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.