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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000017284 |
| rosa_multiflora | Rmu_sc0005652.1_g000025 |
| rosa_roxburghii | Rroxscaffold_6G00411480 |
| rosa_samantha | Rh3AG153600 Rh3CG168500 Rh3DG197800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 77 |
| Acc16I | TGCGCA | 1 cut(s) | 165 |
| Acc36I | ACCTGC | 1 cut(s) | 77 |
| AciI | CCGC | 3 cut(s) | 9, 123, 194 |
| AclWI | GGATC | 1 cut(s) | 26 |
| AfaI | GTAC | 2 cut(s) | 244, 298 |
| AluBI | AGCT | 1 cut(s) | 95 |
| AluI | AGCT | 1 cut(s) | 95 |
| Alw26I | GTCTC | 1 cut(s) | 48 |
| AlwI | GGATC | 1 cut(s) | 26 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| AspLEI | GCGC | 1 cut(s) | 166 |
| AsuHPI | GGTGA | 6 cut(s) | 23, 59, 127, 155, 230, 316 |
| BbvCI | CCTCAGC | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BccI | CCATC | 1 cut(s) | 152 |
| BceAI | ACGGC | 1 cut(s) | 261 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 282, 316 |
| BciVI | GTATCC | 1 cut(s) | 268 |
| BcoDI | GTCTC | 1 cut(s) | 48 |
| BfaI | CTAG | 2 cut(s) | 336, 349 |
| BfmI | CTRYAG | 2 cut(s) | 174, 285 |
| BfuAI | ACCTGC | 1 cut(s) | 77 |
| BfuI | GTATCC | 1 cut(s) | 268 |
| BisI | GCNGC | 2 cut(s) | 192, 195 |
| BlsI | GCNGC | 2 cut(s) | 193, 196 |
| BmsI | GCATC | 1 cut(s) | 211 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 75 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 99, 129 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| Bse3DI | GCAATG | 2 cut(s) | 117, 255 |
| BseDI | CCNNGG | 1 cut(s) | 75 |
| BseMI | GCAATG | 2 cut(s) | 117, 255 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BsmAI | GTCTC | 1 cut(s) | 48 |
| Bsp143I | GATC | 3 cut(s) | 18, 99, 338 |
| Bsp19I | CCATGG | 1 cut(s) | 75 |
| BspACI | CCGC | 3 cut(s) | 9, 123, 194 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspMI | ACCTGC | 1 cut(s) | 77 |
| BspPI | GGATC | 1 cut(s) | 26 |
| BsrDI | GCAATG | 2 cut(s) | 117, 255 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 75 |
| BssMI | GATC | 3 cut(s) | 18, 99, 338 |
| BssT1I | CCWWGG | 1 cut(s) | 75 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstDSI | CCRYGG | 1 cut(s) | 75 |
| BstHHI | GCGC | 1 cut(s) | 166 |
| BstKTI | GATC | 3 cut(s) | 21, 102, 341 |
| BstMAI | GTCTC | 1 cut(s) | 48 |
| BstMBI | GATC | 3 cut(s) | 18, 99, 338 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 92, 188, 290 |
| BstSFI | CTRYAG | 2 cut(s) | 174, 285 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BsuI | GTATCC | 1 cut(s) | 268 |
| BtgI | CCRYGG | 1 cut(s) | 75 |
| BtsI | GCAGTG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| BveI | ACCTGC | 1 cut(s) | 77 |
| CfoI | GCGC | 1 cut(s) | 166 |
| Csp6I | GTAC | 2 cut(s) | 243, 297 |
| CviAII | CATG | 1 cut(s) | 76 |
| CviJI | RGCY | 6 cut(s) | 74, 80, 95, 191, 205, 284 |
| CviKI_1 | RGCY | 6 cut(s) | 74, 80, 95, 191, 205, 284 |
| CviQI | GTAC | 2 cut(s) | 243, 297 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 3 cut(s) | 20, 101, 340 |
| DpnII | GATC | 3 cut(s) | 18, 99, 338 |
| Eco130I | CCWWGG | 1 cut(s) | 75 |
| EcoT14I | CCWWGG | 1 cut(s) | 75 |
| ErhI | CCWWGG | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 5 cut(s) | 36, 77, 239, 272, 281 |
| FatI | CATG | 1 cut(s) | 75 |
| Fnu4HI | GCNGC | 2 cut(s) | 192, 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 192, 195 |
| FspAI | RTGCGCAY | 1 cut(s) | 165 |
| FspBI | CTAG | 2 cut(s) | 336, 349 |
| FspI | TGCGCA | 1 cut(s) | 165 |
| GlaI | GCGC | 1 cut(s) | 165 |
| GluI | GCNGC | 2 cut(s) | 192, 195 |
| HhaI | GCGC | 1 cut(s) | 166 |
| Hin1II | CATG | 1 cut(s) | 79 |
| Hin6I | GCGC | 1 cut(s) | 164 |
| HinP1I | GCGC | 1 cut(s) | 164 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HphI | GGTGA | 6 cut(s) | 23, 59, 127, 155, 230, 316 |
| Hpy188III | TCNNGA | 1 cut(s) | 336 |
| Hpy99I | CGWCG | 1 cut(s) | 304 |
| HpyAV | CCTTC | 2 cut(s) | 44, 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 299 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 92, 188, 290 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| HpySE526I | ACGT | 1 cut(s) | 299 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| HspAI | GCGC | 1 cut(s) | 164 |
| Kzo9I | GATC | 3 cut(s) | 18, 99, 338 |
| LmnI | GCTCC | 2 cut(s) | 92, 107 |
| LpnPI | CCDG | 4 cut(s) | 48, 72, 126, 219 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeI | CTAG | 2 cut(s) | 336, 349 |
| MaeII | ACGT | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 20, 101, 340 |
| MboI | GATC | 3 cut(s) | 18, 99, 338 |
| MluCI | AATT | 1 cut(s) | 343 |
| MnlI | CCTC | 4 cut(s) | 76, 139, 283, 321 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 92, 188, 290 |
| NcoI | CCATGG | 1 cut(s) | 75 |
| NdeII | GATC | 3 cut(s) | 18, 99, 338 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NsbI | TGCGCA | 1 cut(s) | 165 |
| PaqCI | CACCTGC | 1 cut(s) | 77 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PkrI | GCNGC | 2 cut(s) | 193, 196 |
| RsaI | GTAC | 2 cut(s) | 244, 298 |
| RsaNI | GTAC | 2 cut(s) | 243, 297 |
| SatI | GCNGC | 2 cut(s) | 192, 195 |
| Sau3AI | GATC | 3 cut(s) | 18, 99, 338 |
| SetI | ASST | 6 cut(s) | 29, 91, 97, 145, 258, 302 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| SfcI | CTRYAG | 2 cut(s) | 174, 285 |
| SgeI | CNNG | 8 cut(s) | 75, 88, 99, 153, 165, 198, 218, 306 |
| Sse9I | AATT | 1 cut(s) | 343 |
| SsiI | CCGC | 3 cut(s) | 9, 123, 194 |
| SspMI | CTAG | 2 cut(s) | 336, 349 |
| StyI | CCWWGG | 1 cut(s) | 75 |
| TaiI | ACGT | 1 cut(s) | 302 |
| TaqI | TCGA | 1 cut(s) | 98 |
| TaqII | GACCGA | 1 cut(s) | 123 |
| TasI | AATT | 1 cut(s) | 343 |
| TauI | GCSGC | 1 cut(s) | 197 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| TscAI | CASTG | 1 cut(s) | 204 |
| TseI | GCWGC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 1 cut(s) | 266 |
| TspGWI | ACGGA | 2 cut(s) | 250, 257 |
| TspRI | CASTG | 1 cut(s) | 204 |
| XbaI | TCTAGA | 1 cut(s) | 335 |
| XspI | CTAG | 2 cut(s) | 336, 349 |