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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024431 |
| rosa_roxburghii | Rroxscaffold_6G00412800 |
| rosa_samantha | Rh3AG143000 Rh3BG165400 Rh5CG030200 Rh5CG233200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 125, 138 |
| AcvI | CACGTG | 1 cut(s) | 360 |
| AgsI | TTSAA | 2 cut(s) | 35, 157 |
| AjnI | CCWGG | 2 cut(s) | 243, 319 |
| AluBI | AGCT | 3 cut(s) | 7, 147, 168 |
| AluI | AGCT | 3 cut(s) | 7, 147, 168 |
| AlwI | GGATC | 2 cut(s) | 125, 138 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 244 |
| ApeKI | GCWGC | 1 cut(s) | 213 |
| AsuHPI | GGTGA | 1 cut(s) | 111 |
| BamHI | GGATCC | 1 cut(s) | 130 |
| BbrPI | CACGTG | 1 cut(s) | 360 |
| BbvI | GCAGC | 1 cut(s) | 225 |
| BciT130I | CCWGG | 2 cut(s) | 245, 321 |
| BclI | TGATCA | 2 cut(s) | 66, 111 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BisI | GCNGC | 1 cut(s) | 214 |
| BlsI | GCNGC | 1 cut(s) | 215 |
| Bme1390I | CCNGG | 2 cut(s) | 245, 321 |
| BmiI | GGNNCC | 1 cut(s) | 132 |
| BmrFI | CCNGG | 2 cut(s) | 245, 321 |
| BmsI | GCATC | 2 cut(s) | 21, 295 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 183, 215 |
| BpmI | CTGGAG | 1 cut(s) | 185 |
| BsaAI | YACGTR | 1 cut(s) | 360 |
| Bse1I | ACTGG | 1 cut(s) | 177 |
| BseBI | CCWGG | 2 cut(s) | 245, 321 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseNI | ACTGG | 1 cut(s) | 177 |
| BseXI | GCAGC | 1 cut(s) | 225 |
| Bsp143I | GATC | 4 cut(s) | 66, 111, 116, 130 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspHI | TCATGA | 1 cut(s) | 69 |
| BspLI | GGNNCC | 1 cut(s) | 132 |
| BspPI | GGATC | 2 cut(s) | 125, 138 |
| BsrI | ACTGG | 1 cut(s) | 177 |
| BssMI | GATC | 4 cut(s) | 66, 111, 116, 130 |
| Bst2UI | CCWGG | 2 cut(s) | 245, 321 |
| Bst4CI | ACNGT | 2 cut(s) | 293, 315 |
| BstBAI | YACGTR | 1 cut(s) | 360 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstKTI | GATC | 4 cut(s) | 69, 114, 119, 133 |
| BstMBI | GATC | 4 cut(s) | 66, 111, 116, 130 |
| BstNI | CCWGG | 2 cut(s) | 245, 321 |
| BstSCI | CCNGG | 2 cut(s) | 243, 319 |
| BstV1I | GCAGC | 1 cut(s) | 225 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 209 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BtsI | GCAGTG | 1 cut(s) | 326 |
| BtsIMutI | CAGTG | 1 cut(s) | 326 |
| CaiI | CAGNNNCTG | 1 cut(s) | 244 |
| CciI | TCATGA | 1 cut(s) | 69 |
| CviAII | CATG | 2 cut(s) | 70, 173 |
| CviJI | RGCY | 4 cut(s) | 7, 147, 168, 280 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 147, 168, 280 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 4 cut(s) | 68, 113, 118, 132 |
| DpnII | GATC | 4 cut(s) | 66, 111, 116, 130 |
| Eco72I | CACGTG | 1 cut(s) | 360 |
| EcoRII | CCWGG | 2 cut(s) | 243, 319 |
| EcoT22I | ATGCAT | 1 cut(s) | 14 |
| FaeI | CATG | 2 cut(s) | 73, 176 |
| FaiI | YATR | 7 cut(s) | 10, 71, 81, 83, 174, 266, 345 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FatI | CATG | 2 cut(s) | 69, 172 |
| FbaI | TGATCA | 2 cut(s) | 66, 111 |
| Fnu4HI | GCNGC | 1 cut(s) | 214 |
| Fsp4HI | GCNGC | 1 cut(s) | 214 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GluI | GCNGC | 1 cut(s) | 214 |
| GsuI | CTGGAG | 1 cut(s) | 185 |
| Hin1II | CATG | 2 cut(s) | 73, 176 |
| HincII | GTYRAC | 1 cut(s) | 289 |
| HindII | GTYRAC | 1 cut(s) | 289 |
| HindIII | AAGCTT | 1 cut(s) | 166 |
| HphI | GGTGA | 1 cut(s) | 111 |
| Hpy166II | GTNNAC | 1 cut(s) | 289 |
| Hpy188I | TCNGA | 3 cut(s) | 116, 130, 191 |
| Hpy188III | TCNNGA | 3 cut(s) | 70, 157, 202 |
| Hpy8I | GTNNAC | 1 cut(s) | 289 |
| Hpy99I | CGWCG | 1 cut(s) | 226 |
| HpyCH4III | ACNGT | 2 cut(s) | 293, 315 |
| HpyCH4IV | ACGT | 1 cut(s) | 359 |
| HpyCH4V | TGCA | 4 cut(s) | 12, 238, 308, 331 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| HpySE526I | ACGT | 1 cut(s) | 359 |
| Hsp92II | CATG | 2 cut(s) | 73, 176 |
| Ksp22I | TGATCA | 2 cut(s) | 66, 111 |
| Kzo9I | GATC | 4 cut(s) | 66, 111, 116, 130 |
| LpnPI | CCDG | 6 cut(s) | 190, 215, 230, 257, 306, 333 |
| Lsp1109I | GCAGC | 1 cut(s) | 225 |
| LweI | GCATC | 2 cut(s) | 21, 295 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeII | ACGT | 1 cut(s) | 359 |
| MaeIII | GTNAC | 1 cut(s) | 253 |
| MalI | GATC | 4 cut(s) | 68, 113, 118, 132 |
| MboI | GATC | 4 cut(s) | 66, 111, 116, 130 |
| MboII | GAAGA | 1 cut(s) | 87 |
| MfeI | CAATTG | 1 cut(s) | 99 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 3 cut(s) | 99, 227, 351 |
| MnlI | CCTC | 5 cut(s) | 10, 197, 198, 209, 270 |
| Mph1103I | ATGCAT | 1 cut(s) | 14 |
| MseI | TTAA | 1 cut(s) | 339 |
| MspR9I | CCNGG | 2 cut(s) | 245, 321 |
| MunI | CAATTG | 1 cut(s) | 99 |
| MvaI | CCWGG | 2 cut(s) | 245, 321 |
| NdeII | GATC | 4 cut(s) | 66, 111, 116, 130 |
| NlaIII | CATG | 2 cut(s) | 73, 176 |
| NlaIV | GGNNCC | 1 cut(s) | 132 |
| NsiI | ATGCAT | 1 cut(s) | 14 |
| PagI | TCATGA | 1 cut(s) | 69 |
| PfoI | TCCNGGA | 1 cut(s) | 319 |
| PkrI | GCNGC | 1 cut(s) | 215 |
| PmaCI | CACGTG | 1 cut(s) | 360 |
| PmlI | CACGTG | 1 cut(s) | 360 |
| Ppu21I | YACGTR | 1 cut(s) | 360 |
| Psp6I | CCWGG | 2 cut(s) | 243, 319 |
| PspCI | CACGTG | 1 cut(s) | 360 |
| PspGI | CCWGG | 2 cut(s) | 243, 319 |
| PspN4I | GGNNCC | 1 cut(s) | 132 |
| PstNI | CAGNNNCTG | 1 cut(s) | 244 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| SaqAI | TTAA | 1 cut(s) | 339 |
| SatI | GCNGC | 1 cut(s) | 214 |
| Sau3AI | GATC | 4 cut(s) | 66, 111, 116, 130 |
| ScrFI | CCNGG | 2 cut(s) | 245, 321 |
| SetI | ASST | 5 cut(s) | 9, 124, 149, 170, 362 |
| SfaNI | GCATC | 2 cut(s) | 21, 295 |
| Sse9I | AATT | 3 cut(s) | 99, 227, 351 |
| SspMI | CTAG | 1 cut(s) | 144 |
| StyD4I | CCNGG | 2 cut(s) | 243, 319 |
| TaaI | ACNGT | 2 cut(s) | 293, 315 |
| TaiI | ACGT | 1 cut(s) | 362 |
| TaqI | TCGA | 1 cut(s) | 15 |
| TasI | AATT | 3 cut(s) | 99, 227, 351 |
| Tru1I | TTAA | 1 cut(s) | 339 |
| Tru9I | TTAA | 1 cut(s) | 339 |
| TscAI | CASTG | 1 cut(s) | 333 |
| TseI | GCWGC | 1 cut(s) | 213 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 333 |
| XspI | CTAG | 1 cut(s) | 144 |
| Zsp2I | ATGCAT | 1 cut(s) | 14 |