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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024431 |
| rosa_roxburghii | Rroxscaffold_6G00412800 |
| rosa_samantha | Rh3AG143000 Rh3BG165400 Rh5CG030200 Rh5CG233200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 317 |
| Acc36I | ACCTGC | 1 cut(s) | 317 |
| AcsI | RAATTY | 1 cut(s) | 5 |
| AcuI | CTGAAG | 2 cut(s) | 178, 231 |
| AdeI | CACNNNGTG | 1 cut(s) | 142 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 311 |
| AgsI | TTSAA | 1 cut(s) | 68 |
| AjiI | CACGTC | 1 cut(s) | 36 |
| AjnI | CCWGG | 2 cut(s) | 109, 185 |
| AluBI | AGCT | 2 cut(s) | 198, 290 |
| AluI | AGCT | 2 cut(s) | 198, 290 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 110 |
| ApeKI | GCWGC | 1 cut(s) | 79 |
| ApoI | RAATTY | 1 cut(s) | 5 |
| AsuHPI | GGTGA | 2 cut(s) | 3, 98 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BciT130I | CCWGG | 2 cut(s) | 111, 187 |
| BclI | TGATCA | 1 cut(s) | 228 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| BfuAI | ACCTGC | 1 cut(s) | 317 |
| BisI | GCNGC | 1 cut(s) | 80 |
| BlsI | GCNGC | 1 cut(s) | 81 |
| Bme1390I | CCNGG | 2 cut(s) | 111, 187 |
| BmgBI | CACGTC | 1 cut(s) | 36 |
| BmiI | GGNNCC | 1 cut(s) | 301 |
| BmrFI | CCNGG | 2 cut(s) | 111, 187 |
| BmsI | GCATC | 1 cut(s) | 161 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 182, 212 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 311 |
| BseBI | CCWGG | 2 cut(s) | 111, 187 |
| BseGI | GGATG | 1 cut(s) | 38 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 311 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 311 |
| Bsp143I | GATC | 1 cut(s) | 228 |
| BspLI | GGNNCC | 1 cut(s) | 301 |
| BspMAI | CTGCAG | 1 cut(s) | 328 |
| BspMI | ACCTGC | 1 cut(s) | 317 |
| BssMI | GATC | 1 cut(s) | 228 |
| Bst2UI | CCWGG | 2 cut(s) | 111, 187 |
| Bst4CI | ACNGT | 2 cut(s) | 159, 181 |
| BstF5I | GGATG | 1 cut(s) | 38 |
| BstKTI | GATC | 1 cut(s) | 231 |
| BstMBI | GATC | 1 cut(s) | 228 |
| BstNI | CCWGG | 2 cut(s) | 111, 187 |
| BstSCI | CCNGG | 2 cut(s) | 109, 185 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BtrI | CACGTC | 1 cut(s) | 36 |
| BtsCI | GGATG | 1 cut(s) | 38 |
| BtsI | GCAGTG | 1 cut(s) | 321 |
| BtsIMutI | CAGTG | 1 cut(s) | 321 |
| BveI | ACCTGC | 1 cut(s) | 317 |
| CaiI | CAGNNNCTG | 1 cut(s) | 110 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 2 cut(s) | 76, 162 |
| CviJI | RGCY | 4 cut(s) | 146, 198, 257, 290 |
| CviKI_1 | RGCY | 4 cut(s) | 146, 198, 257, 290 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DpnI | GATC | 1 cut(s) | 230 |
| DpnII | GATC | 1 cut(s) | 228 |
| DraIII | CACNNNGTG | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 2 cut(s) | 178, 231 |
| EcoRII | CCWGG | 2 cut(s) | 109, 185 |
| FaeI | CATG | 2 cut(s) | 79, 165 |
| FaiI | YATR | 5 cut(s) | 26, 77, 98, 132, 163 |
| FatI | CATG | 2 cut(s) | 75, 161 |
| FbaI | TGATCA | 1 cut(s) | 228 |
| Fnu4HI | GCNGC | 1 cut(s) | 80 |
| FokI | GGATG | 1 cut(s) | 25 |
| Fsp4HI | GCNGC | 1 cut(s) | 80 |
| GluI | GCNGC | 1 cut(s) | 80 |
| Hin1II | CATG | 2 cut(s) | 79, 165 |
| HincII | GTYRAC | 1 cut(s) | 155 |
| HindII | GTYRAC | 1 cut(s) | 155 |
| HphI | GGTGA | 2 cut(s) | 3, 98 |
| Hpy166II | GTNNAC | 1 cut(s) | 155 |
| Hpy8I | GTNNAC | 1 cut(s) | 155 |
| HpyCH4III | ACNGT | 2 cut(s) | 159, 181 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 4 cut(s) | 79, 104, 174, 326 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 2 cut(s) | 79, 165 |
| Ksp22I | TGATCA | 1 cut(s) | 228 |
| Kzo9I | GATC | 1 cut(s) | 228 |
| LmnI | GCTCC | 1 cut(s) | 203 |
| LpnPI | CCDG | 8 cut(s) | 96, 123, 172, 199, 207, 222, 301, 312 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| LweI | GCATC | 1 cut(s) | 161 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 2 cut(s) | 86, 119 |
| MalI | GATC | 1 cut(s) | 230 |
| MboI | GATC | 1 cut(s) | 228 |
| MboII | GAAGA | 1 cut(s) | 224 |
| MluCI | AATT | 3 cut(s) | 5, 68, 93 |
| MnlI | CCTC | 1 cut(s) | 52 |
| MseI | TTAA | 1 cut(s) | 334 |
| MspR9I | CCNGG | 2 cut(s) | 111, 187 |
| MvaI | CCWGG | 2 cut(s) | 111, 187 |
| NdeII | GATC | 1 cut(s) | 228 |
| NlaIII | CATG | 2 cut(s) | 79, 165 |
| NlaIV | GGNNCC | 1 cut(s) | 301 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| PaqCI | CACCTGC | 1 cut(s) | 317 |
| PkrI | GCNGC | 1 cut(s) | 81 |
| Psp6I | CCWGG | 2 cut(s) | 109, 185 |
| PspGI | CCWGG | 2 cut(s) | 109, 185 |
| PspN4I | GGNNCC | 1 cut(s) | 301 |
| PstI | CTGCAG | 1 cut(s) | 328 |
| PstNI | CAGNNNCTG | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| SaqAI | TTAA | 1 cut(s) | 334 |
| SatI | GCNGC | 1 cut(s) | 80 |
| Sau3AI | GATC | 1 cut(s) | 228 |
| ScrFI | CCNGG | 2 cut(s) | 111, 187 |
| SetI | ASST | 7 cut(s) | 38, 88, 144, 200, 239, 292, 331 |
| SfaNI | GCATC | 1 cut(s) | 161 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| Sse9I | AATT | 3 cut(s) | 5, 68, 93 |
| SspI | AATATT | 1 cut(s) | 246 |
| StyD4I | CCNGG | 2 cut(s) | 109, 185 |
| TaaI | ACNGT | 2 cut(s) | 159, 181 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TasI | AATT | 3 cut(s) | 5, 68, 93 |
| Tru1I | TTAA | 1 cut(s) | 334 |
| Tru9I | TTAA | 1 cut(s) | 334 |
| TscAI | CASTG | 1 cut(s) | 328 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| TseI | GCWGC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 328 |
| XapI | RAATTY | 1 cut(s) | 5 |