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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024431 |
| rosa_roxburghii | Rroxscaffold_6G00412800 |
| rosa_samantha | Rh3AG143000 Rh3BG165400 Rh5CG030200 Rh5CG233200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 108, 109, 122 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 235, 424 |
| AgsI | TTSAA | 1 cut(s) | 141 |
| AjiI | CACGTC | 1 cut(s) | 323 |
| AjnI | CCWGG | 3 cut(s) | 126, 228, 316 |
| AleI | CACNNNNGTG | 1 cut(s) | 20 |
| AluBI | AGCT | 3 cut(s) | 152, 411, 424 |
| AluI | AGCT | 3 cut(s) | 152, 411, 424 |
| AlwI | GGATC | 3 cut(s) | 108, 109, 122 |
| AsuHPI | GGTGA | 2 cut(s) | 95, 209 |
| BamHI | GGATCC | 1 cut(s) | 114 |
| BbsI | GAAGAC | 1 cut(s) | 321 |
| BccI | CCATC | 1 cut(s) | 91 |
| BciT130I | CCWGG | 3 cut(s) | 128, 230, 318 |
| BclI | TGATCA | 2 cut(s) | 27, 352 |
| Bme1390I | CCNGG | 3 cut(s) | 128, 230, 318 |
| BmgBI | CACGTC | 1 cut(s) | 323 |
| BmiI | GGNNCC | 1 cut(s) | 116 |
| BmrFI | CCNGG | 3 cut(s) | 128, 230, 318 |
| BmsI | GCATC | 1 cut(s) | 280 |
| BoxI | GACNNNNGTC | 1 cut(s) | 325 |
| BpiI | GAAGAC | 1 cut(s) | 321 |
| BpmI | CTGGAG | 2 cut(s) | 164, 365 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 235, 424 |
| Bse1I | ACTGG | 1 cut(s) | 156 |
| BseBI | CCWGG | 3 cut(s) | 128, 230, 318 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 235, 424 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseNI | ACTGG | 1 cut(s) | 156 |
| BslFI | GGGAC | 1 cut(s) | 353 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 235, 424 |
| BsmFI | GGGAC | 1 cut(s) | 353 |
| Bsp143I | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BspLI | GGNNCC | 1 cut(s) | 116 |
| BspPI | GGATC | 3 cut(s) | 108, 109, 122 |
| BsrI | ACTGG | 1 cut(s) | 156 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| BssMI | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| Bst2UI | CCWGG | 3 cut(s) | 128, 230, 318 |
| Bst4CI | ACNGT | 3 cut(s) | 83, 278, 300 |
| BstC8I | GCNNGC | 1 cut(s) | 413 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstKTI | GATC | 5 cut(s) | 30, 72, 103, 117, 355 |
| BstMBI | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 421 |
| BstNI | CCWGG | 3 cut(s) | 128, 230, 318 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 325 |
| BstSCI | CCNGG | 3 cut(s) | 126, 228, 316 |
| BstV2I | GAAGAC | 1 cut(s) | 321 |
| BstX2I | RGATCY | 1 cut(s) | 114 |
| BstYI | RGATCY | 1 cut(s) | 114 |
| BtrI | CACGTC | 1 cut(s) | 323 |
| BtsI | GCAGTG | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| Cac8I | GCNNGC | 1 cut(s) | 413 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviJI | RGCY | 5 cut(s) | 131, 152, 265, 411, 424 |
| CviKI_1 | RGCY | 5 cut(s) | 131, 152, 265, 411, 424 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| DpnI | GATC | 5 cut(s) | 29, 71, 102, 116, 354 |
| DpnII | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| EcoRII | CCWGG | 3 cut(s) | 126, 228, 316 |
| FaiI | YATR | 5 cut(s) | 42, 44, 209, 251, 454 |
| FaqI | GGGAC | 1 cut(s) | 353 |
| FbaI | TGATCA | 2 cut(s) | 27, 352 |
| GsuI | CTGGAG | 2 cut(s) | 164, 365 |
| HindIII | AAGCTT | 1 cut(s) | 150 |
| HinfI | GANTC | 1 cut(s) | 326 |
| HphI | GGTGA | 2 cut(s) | 95, 209 |
| Hpy188I | TCNGA | 4 cut(s) | 74, 96, 114, 170 |
| Hpy188III | TCNNGA | 8 cut(s) | 31, 181, 221, 305, 347, 356, 382, 393 |
| HpyCH4III | ACNGT | 3 cut(s) | 83, 278, 300 |
| HpyCH4IV | ACGT | 1 cut(s) | 322 |
| HpyCH4V | TGCA | 3 cut(s) | 215, 293, 415 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 421 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| HpySE526I | ACGT | 1 cut(s) | 322 |
| Ksp22I | TGATCA | 2 cut(s) | 27, 352 |
| Kzo9I | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| LweI | GCATC | 1 cut(s) | 280 |
| MaeII | ACGT | 1 cut(s) | 322 |
| MaeIII | GTNAC | 2 cut(s) | 77, 238 |
| MalI | GATC | 5 cut(s) | 29, 71, 102, 116, 354 |
| MboI | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| MboII | GAAGA | 2 cut(s) | 48, 321 |
| MfeI | CAATTG | 1 cut(s) | 372 |
| MflI | RGATCY | 1 cut(s) | 114 |
| MluCI | AATT | 4 cut(s) | 60, 171, 204, 372 |
| MlyI | GAGTC | 1 cut(s) | 335 |
| MnlI | CCTC | 5 cut(s) | 20, 177, 188, 255, 389 |
| MseI | TTAA | 2 cut(s) | 335, 405 |
| MslI | CAYNNNNRTG | 1 cut(s) | 20 |
| MspR9I | CCNGG | 3 cut(s) | 128, 230, 318 |
| MunI | CAATTG | 1 cut(s) | 372 |
| MvaI | CCWGG | 3 cut(s) | 128, 230, 318 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 421 |
| NdeII | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| NlaIV | GGNNCC | 1 cut(s) | 116 |
| OliI | CACNNNNGTG | 1 cut(s) | 20 |
| PleI | GAGTC | 1 cut(s) | 334 |
| PpsI | GAGTC | 1 cut(s) | 334 |
| PshAI | GACNNNNGTC | 1 cut(s) | 325 |
| Psp6I | CCWGG | 3 cut(s) | 126, 228, 316 |
| PspGI | CCWGG | 3 cut(s) | 126, 228, 316 |
| PspN4I | GGNNCC | 1 cut(s) | 116 |
| PsuI | RGATCY | 1 cut(s) | 114 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| RseI | CAYNNNNRTG | 1 cut(s) | 20 |
| SaqAI | TTAA | 2 cut(s) | 335, 405 |
| Sau3AI | GATC | 5 cut(s) | 27, 69, 100, 114, 352 |
| SchI | GAGTC | 1 cut(s) | 335 |
| ScrFI | CCNGG | 3 cut(s) | 128, 230, 318 |
| SetI | ASST | 6 cut(s) | 108, 154, 199, 325, 413, 426 |
| SfaNI | GCATC | 1 cut(s) | 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 20 |
| Sse9I | AATT | 4 cut(s) | 60, 171, 204, 372 |
| StyD4I | CCNGG | 3 cut(s) | 126, 228, 316 |
| TaaI | ACNGT | 3 cut(s) | 83, 278, 300 |
| TaiI | ACGT | 1 cut(s) | 325 |
| TasI | AATT | 4 cut(s) | 60, 171, 204, 372 |
| Tru1I | TTAA | 2 cut(s) | 335, 405 |
| Tru9I | TTAA | 2 cut(s) | 335, 405 |
| TscAI | CASTG | 1 cut(s) | 22 |
| TspDTI | ATGAA | 1 cut(s) | 216 |
| TspRI | CASTG | 1 cut(s) | 22 |