ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005257.1_g000007 Rmu_sc0009745.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00416340 |
| rosa_samantha | Rh3AG124300 Rh3BG128900 Rh3CG131100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 19 |
| AgsI | TTSAA | 1 cut(s) | 98 |
| AhlI | ACTAGT | 1 cut(s) | 86 |
| AluBI | AGCT | 2 cut(s) | 41, 143 |
| AluI | AGCT | 2 cut(s) | 41, 143 |
| Alw21I | GWGCWC | 1 cut(s) | 145 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 81 |
| BanII | GRGCYC | 1 cut(s) | 145 |
| Bbv12I | GWGCWC | 1 cut(s) | 145 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BcuI | ACTAGT | 1 cut(s) | 86 |
| BfaI | CTAG | 2 cut(s) | 17, 87 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| BmsI | GCATC | 1 cut(s) | 66 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseRI | GAGGAG | 2 cut(s) | 135, 138 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 1 cut(s) | 145 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 19 |
| Bsp1286I | GDGCHC | 1 cut(s) | 145 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspMAI | CTGCAG | 1 cut(s) | 46 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstHHI | GCGC | 1 cut(s) | 81 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 62, 100 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| CfoI | GCGC | 1 cut(s) | 81 |
| CviAII | CATG | 1 cut(s) | 156 |
| CviJI | RGCY | 4 cut(s) | 41, 65, 94, 143 |
| CviKI_1 | RGCY | 4 cut(s) | 41, 65, 94, 143 |
| Ecl136II | GAGCTC | 1 cut(s) | 143 |
| Eco24I | GRGCYC | 1 cut(s) | 145 |
| Eco53kI | GAGCTC | 1 cut(s) | 143 |
| EcoICRI | GAGCTC | 1 cut(s) | 143 |
| EcoT38I | GRGCYC | 1 cut(s) | 145 |
| FaeI | CATG | 1 cut(s) | 159 |
| FaiI | YATR | 3 cut(s) | 123, 135, 157 |
| FatI | CATG | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| FokI | GGATG | 1 cut(s) | 41 |
| FriOI | GRGCYC | 1 cut(s) | 145 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| FspBI | CTAG | 2 cut(s) | 17, 87 |
| GlaI | GCGC | 1 cut(s) | 80 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HhaI | GCGC | 1 cut(s) | 81 |
| Hin1II | CATG | 1 cut(s) | 159 |
| Hin6I | GCGC | 1 cut(s) | 79 |
| HinP1I | GCGC | 1 cut(s) | 79 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 1 cut(s) | 44 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 62, 100 |
| Hsp92II | CATG | 1 cut(s) | 159 |
| HspAI | GCGC | 1 cut(s) | 79 |
| LmnI | GCTCC | 1 cut(s) | 148 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| LweI | GCATC | 1 cut(s) | 66 |
| MaeI | CTAG | 2 cut(s) | 17, 87 |
| MboII | GAAGA | 3 cut(s) | 85, 102, 119 |
| MhlI | GDGCHC | 1 cut(s) | 145 |
| MluCI | AATT | 1 cut(s) | 58 |
| MnlI | CCTC | 3 cut(s) | 114, 156, 159 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 62, 100 |
| NlaIII | CATG | 1 cut(s) | 159 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PflFI | GACNNNGTC | 1 cut(s) | 50 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| Psp124BI | GAGCTC | 1 cut(s) | 145 |
| PstI | CTGCAG | 1 cut(s) | 46 |
| PsyI | GACNNNGTC | 1 cut(s) | 50 |
| SacI | GAGCTC | 1 cut(s) | 145 |
| SatI | GCNGC | 1 cut(s) | 42 |
| SduI | GDGCHC | 1 cut(s) | 145 |
| SetI | ASST | 3 cut(s) | 43, 51, 145 |
| SfaNI | GCATC | 1 cut(s) | 66 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SgeI | CNNG | 4 cut(s) | 29, 62, 94, 99 |
| SpeI | ACTAGT | 1 cut(s) | 86 |
| Sse9I | AATT | 1 cut(s) | 58 |
| SsiI | CCGC | 1 cut(s) | 10 |
| SspMI | CTAG | 2 cut(s) | 17, 87 |
| SstI | GAGCTC | 1 cut(s) | 145 |
| TasI | AATT | 1 cut(s) | 58 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| TseI | GCWGC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 85 |
| Tth111I | GACNNNGTC | 1 cut(s) | 50 |
| XspI | CTAG | 2 cut(s) | 17, 87 |