No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005257.1_g000007 Rmu_sc0009745.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00416340 |
| rosa_samantha | Rh3AG124300 Rh3BG128900 Rh3CG131100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 220, 289 |
| AclWI | GGATC | 1 cut(s) | 280 |
| AcuI | CTGAAG | 1 cut(s) | 291 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 31, 229 |
| AgsI | TTSAA | 1 cut(s) | 179 |
| AluBI | AGCT | 6 cut(s) | 16, 115, 151, 161, 251, 311 |
| AluI | AGCT | 6 cut(s) | 16, 115, 151, 161, 251, 311 |
| Alw26I | GTCTC | 2 cut(s) | 39, 194 |
| AlwI | GGATC | 1 cut(s) | 280 |
| ApeKI | GCWGC | 3 cut(s) | 106, 251, 311 |
| AsuHPI | GGTGA | 1 cut(s) | 209 |
| BanII | GRGCYC | 1 cut(s) | 26 |
| BbvI | GCAGC | 3 cut(s) | 93, 238, 298 |
| BccI | CCATC | 1 cut(s) | 62 |
| BceAI | ACGGC | 1 cut(s) | 207 |
| BcoDI | GTCTC | 2 cut(s) | 39, 194 |
| BfaI | CTAG | 2 cut(s) | 227, 297 |
| BfmI | CTRYAG | 2 cut(s) | 107, 252 |
| BisI | GCNGC | 3 cut(s) | 107, 252, 312 |
| BlsI | GCNGC | 3 cut(s) | 108, 253, 313 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 31, 229 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseGI | GGATG | 1 cut(s) | 244 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 31, 229 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseXI | GCAGC | 3 cut(s) | 93, 238, 298 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 31, 229 |
| BsmAI | GTCTC | 2 cut(s) | 39, 194 |
| Bsp1286I | GDGCHC | 1 cut(s) | 26 |
| Bsp143I | GATC | 1 cut(s) | 285 |
| BspACI | CCGC | 2 cut(s) | 220, 289 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspMAI | CTGCAG | 2 cut(s) | 111, 256 |
| BspPI | GGATC | 1 cut(s) | 280 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssMI | GATC | 1 cut(s) | 285 |
| BstF5I | GGATG | 1 cut(s) | 244 |
| BstKTI | GATC | 1 cut(s) | 288 |
| BstMAI | GTCTC | 2 cut(s) | 39, 194 |
| BstMBI | GATC | 1 cut(s) | 285 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 83, 112, 272, 311 |
| BstSFI | CTRYAG | 2 cut(s) | 107, 252 |
| BstV1I | GCAGC | 3 cut(s) | 93, 238, 298 |
| BstX2I | RGATCY | 1 cut(s) | 285 |
| BstYI | RGATCY | 1 cut(s) | 285 |
| BtsCI | GGATG | 1 cut(s) | 244 |
| DpnI | GATC | 1 cut(s) | 287 |
| DpnII | GATC | 1 cut(s) | 285 |
| EciI | GGCGGA | 1 cut(s) | 278 |
| Eco24I | GRGCYC | 1 cut(s) | 26 |
| Eco57I | CTGAAG | 1 cut(s) | 291 |
| EcoT38I | GRGCYC | 1 cut(s) | 26 |
| FaiI | YATR | 4 cut(s) | 173, 212, 334, 346 |
| Fnu4HI | GCNGC | 3 cut(s) | 107, 252, 312 |
| FokI | GGATG | 1 cut(s) | 251 |
| FriOI | GRGCYC | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 3 cut(s) | 107, 252, 312 |
| FspBI | CTAG | 2 cut(s) | 227, 297 |
| GluI | GCNGC | 3 cut(s) | 107, 252, 312 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HindIII | AAGCTT | 2 cut(s) | 113, 149 |
| HinfI | GANTC | 3 cut(s) | 40, 47, 214 |
| HphI | GGTGA | 1 cut(s) | 209 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 3 cut(s) | 81, 101, 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| HpyAV | CCTTC | 1 cut(s) | 328 |
| HpyCH4V | TGCA | 4 cut(s) | 109, 126, 146, 254 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 83, 112, 272, 311 |
| Kzo9I | GATC | 1 cut(s) | 285 |
| LmnI | GCTCC | 1 cut(s) | 82 |
| LpnPI | CCDG | 1 cut(s) | 115 |
| Lsp1109I | GCAGC | 3 cut(s) | 93, 238, 298 |
| MaeI | CTAG | 2 cut(s) | 227, 297 |
| MaeIII | GTNAC | 1 cut(s) | 56 |
| MalI | GATC | 1 cut(s) | 287 |
| MboI | GATC | 1 cut(s) | 285 |
| MboII | GAAGA | 3 cut(s) | 295, 313, 330 |
| MflI | RGATCY | 1 cut(s) | 285 |
| MhlI | GDGCHC | 1 cut(s) | 26 |
| MluCI | AATT | 4 cut(s) | 5, 63, 207, 268 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MnlI | CCTC | 3 cut(s) | 36, 105, 325 |
| MseI | TTAA | 2 cut(s) | 62, 197 |
| MspA1I | CMGCKG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 83, 112, 272, 311 |
| NdeII | GATC | 1 cut(s) | 285 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| PfeI | GAWTC | 2 cut(s) | 40, 214 |
| PflFI | GACNNNGTC | 1 cut(s) | 260 |
| PkrI | GCNGC | 3 cut(s) | 108, 253, 313 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PstI | CTGCAG | 2 cut(s) | 111, 256 |
| PsuI | RGATCY | 1 cut(s) | 285 |
| PsyI | GACNNNGTC | 1 cut(s) | 260 |
| PvuII | CAGCTG | 1 cut(s) | 311 |
| SaqAI | TTAA | 2 cut(s) | 62, 197 |
| SatI | GCNGC | 3 cut(s) | 107, 252, 312 |
| Sau3AI | GATC | 1 cut(s) | 285 |
| SchI | GAGTC | 1 cut(s) | 41 |
| SduI | GDGCHC | 1 cut(s) | 26 |
| SetI | ASST | 8 cut(s) | 18, 117, 153, 163, 253, 261, 302, 313 |
| SfcI | CTRYAG | 2 cut(s) | 107, 252 |
| SgeI | CNNG | 7 cut(s) | 56, 142, 215, 239, 272, 304, 309 |
| Sse9I | AATT | 4 cut(s) | 5, 63, 207, 268 |
| SsiI | CCGC | 2 cut(s) | 220, 289 |
| SspMI | CTAG | 2 cut(s) | 227, 297 |
| TaqI | TCGA | 1 cut(s) | 43 |
| TasI | AATT | 4 cut(s) | 5, 63, 207, 268 |
| TfiI | GAWTC | 2 cut(s) | 40, 214 |
| Tru1I | TTAA | 2 cut(s) | 62, 197 |
| Tru9I | TTAA | 2 cut(s) | 62, 197 |
| TseI | GCWGC | 3 cut(s) | 106, 251, 311 |
| TspDTI | ATGAA | 3 cut(s) | 17, 153, 227 |
| Tth111I | GACNNNGTC | 1 cut(s) | 260 |
| XspI | CTAG | 2 cut(s) | 227, 297 |