Rroxscaffold_6G00418700

Protein MON2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0007304
Physical Location & Seq
Reverse (-)
40267372 .. 40288767
21396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00418700.1

Sequence Viewer

Length: 4989 bp
ATGGCTTTCATGGCGGTTTTGGAGTCAGATCTTCGCGCTCTCTCCGCCGAGGCTCGCCGTCGCTACCCTGCTGTCAAAGACGGCGCTGAGCACGCAATTATAAAGCTCCGTTCTTTGTCAAGTCCTGGTGAGATTGCGCAGAATGAGGACATATTGAGAATCTTCTTGATGGCTTGTGAGGTTAAAACTGTGAAGTTGAGTGTTATTGGACTCTCGTGTCTACAGAAGCTTATATCTCATGATGCTGTTGCTTCATCAGCTCTGCACGAGATACTTTGTACCTTGAAGGATCATGCTGAAATGACCGATGAGAGTGTTCAACTTAAGACCCTGCAGACTGTATTGATAATATTGCAGTCACCTTTACACCCTCAGAATGAGGACGATATGGCTCAAGCTCTTGGTATATGCCTTCGGCTTCTAGAAAATAGGTCCCCTGACAGTGTGCGCAATACTGCTGCAGCTACTTTCAGGCAAGCTGTAGCACTGATTTTTGATCATGTGGTTTGCGCTGAGACTCTTCCTGCCGGCAAGCTTAGTTCTGGAGGTTACATCTCTCGGACCAGTCCAGTTAGTGGTGATGTTAGTTGCAGCATAAATCTTTCAGAGTCTTTGGATGGATCTGTTTCTGGACGGTCATCATTGATGAGGGAGACACTAACTAAAGCTGGAAAGCTTGGGCTTCGTCTGCTTGAAGACCTGACAGCTCTTGCTGCAGGTGGATCTGCAATCTGGTTACGTGTCAGTTCTCTACAGCGGTCCTTTGCACTTGACATACTGGAGTTTGTTCTGTCCAACTATGTGGCTGTTTTCCGAACCTTGCTTCCTTATGAGCAGGTCCTGCGTTACCAGATATGTTCAATTCTAATGACCTCACTTCGTACAAATGCGGAGCTTGAAGGGGAAGCAGGAGAGCCGTCATTTCGACGCTTGGTCTTGCGGTCAGTTGCCCATATTATCCGGCTTTACAGTTCATCCCTTATCACTGAATGTGAGGTCTTCCTTAGTATGTTGGTGAAGGTCACATTTCTTGATTTGCCATTATGGCATCGTATTCTTGTTCTTGAGATCCTGAGGGGCTTTTGTGTGGAGGCAAGGACATTGCGGATTCTTTTCCGAAACTTTGATATGAATCCCAAGAACACCAATGTTGTGGAGGGCATGGTGAAAGCTCTTGCTAGAGTAGTTTCAAGTGTTCAAGAGACTAGTGAAGAGAGCCTGGCAGCTGTTGCAGGGATGTTTAACAGCAAAGCTAAAGGAGTTGAGTGGAGCCTTGATAATGATGCATCCAATGCTGCAGTATTGGTTGCTAGTGAAGCTCATTGTATAACCTTGGCAGTCGAAGGTCTGCTTGGTGTTGTCTTCACAGTAGCTACATTGACGGATGAAGCAGTAGATTCCGGAGAGATTGAATCCCCCAGATGTGACTATGATCCACCGGCAAAGAAGACTGGAAATGCTGCTCTTCTCTGTCTCTCTATGGTTGATTCATTATGGTTGACGATACTAGATGCATTCTCCTTTATTTTGTCAAGGTCACAAGGTGAGGCTATTGTGTTGGAAATACTGAAGGGATATCAGGCCTTCACCCAGGCATGCGGAGTTCTTGGTGCTGTAGAACCTTTGAACTCCTTTTTAGCATCACTTTGCAAATTTACAATCATTTTCCCCGTTGAAGCAGAAAAAAGGAGCATTACTTTACAATCTCCTGGGTCCAAACGGTCTGAACAAGTAGTTGATCAAAGGGAAAGTGTTGTTCTCACTCCTAAGAATGTCCAGGCCTTAAGAACTCTCTTCAACATTGCTCATAGATTACACAATGTGTTGGGCCCATCCTGGGTTTTGGTATTAGAAACCCTAGCAGCCCTAGACCGCGCAATCCATTCTCCGCATGCTACCACACAGGAGGTGTCCACGGCTGTGCCAAAACTTACAAGAGAATCATCTGGTCAATCCAGTGACTTAAATATTCTTTCATCCTTGAATTCTCAGCTGTTTGAGAGCTCAGCACTGATGCACATATCTGCAGTAAAATCCCTTCTTTGTGCACTGGGCCAACTGTCACAGCAATGCATGGCTGGGATTTCAAATGGATCTGTACCTGCTTCAAGTCAAAAAGTTGGAAACATAAACTTTTCAGTGGAGAGAATGATATCCATCCTAGTCAATAATCTACACAGAGTGGAGCCATTGTGGGATCAAGTTGTTGGCCACTTTCTTGAGCTTGCAGAAAATTCTAACCAGCATTTACGTAATATGGCCCTTGATGCATTAGATGAATCAATATGTGCTGTTTTAGGTTCAGACAAGTTCCCAGACAACACAACAAGCAGATTCAATGGCTCGTCTCAGAGTATGGATACTGGGGTTACAGATTTGGGATCACTTGAGTGTGCTGTCATATCTCCACTAAGGGTTCTTTATCTTTCTACTCAAAGTGTTGACTCACGTACTGGATCTTTGAAAATTCTTCTGCATGTTTTAGAGAGGCATGGGGAGAAATTACACTACAGTTGGCCAAATATTCTTGAAATGTTGAGGTCTGTAGCGGACTCTTCAGATAAGGAACTCATTACTCTGGGCTTTCAGTGCCTGCGGGTGATTATGAACGATGGACTTTCTACTATACCTGCAGACTGCCTTCAAGTATGTGTAGATGTGACTGGAGCATACAGTGCTCAAAAGACAGAGCTGAATATAAGTCTGACAGCAATAGGCCTCTTATGGACAACAACTGACTTTATTGTGAAAGCTCTAATCGATGGACCTGGGGCGGAGAAGAAAACAGGGATTTCTGATGTGCATCCTATTCTAAAGCAATTGGATGGTGACATACCAAAAGAACAAACAATCAATGGCTCAGATAATGCCAATGAGGAAGTTCCCTCATTAACTATAGTTGACAGTGACAGACTGCTTTTCTCTGTTTTCTCATTACTTCAAAAGCTTGGAGCCGATGAGAGGCCAGAGGTTAGAAATTCAGCGGTCAGGACATTGTTTCAGACACTTGGAAGTCACGGGCAAAAACTTTCTAAAAGCATGTGGGAGGATTGCCTTTGGAATTATGTGTTTCCTACACTCGATCGTGCTTCTCACATGGCTGCAACTTCATCGAAAGATGAATGGCATGGGAAAGAACTTGGAACTCGAGGAGGAAAAGCAGTTCATATGCTCATACATCACAGTCGCAACACAGCTCAGAAACAGTGGGATGAGACATTAGTACTTGTCCTTGGTGGTGTAGCCCGTATTCTACGCTCATTCTTTCCTTTTCTTAGAAGTTTAAGCAATTTTTGGTCAGGATGGGAGTCTTTGCTTTTATTTGTGAAGAATAGTGTATTAAATGGAAGCAAAGAGGTTGCGCTTGCTGCAATAAATTGCTTACAGACACCTATTCTTTCTCATTCTTCCAAGGGGAACTTGCCGATGCCTTATCTTGAATCAGTACTTGATGTTTACGAGCTTGTTCTTCAAAAGTCAACAAACCTGAGTGGAAATGCAGCCAGCAAGGTGAAGCAGGAGATTTTGCACAGTCTTGGGGAACTATATGTGCAAGCACAAAGGATGTTTGATGATCGGTTGTATACACAGTTGCTTGCAGTCATACGCTTGGCTATGAAACATGCCATAGTTGCCAACGATAACTGTGAAACTGAATATGGAAATGTTCCACCTGTACTACGTACTGTGCTTGAGATCATTCCAATGTTATGTCCAACAGAGCGCATTTCTTCAATGTGGCTGATTCTTCTTCGGGATTTTTCTCAATTTCTGCCAAGATTGAATTCTACCGTACAAATTGAGGAAGATGATGCAGAGGAAGCTAGCACTAGTGACCGAGTTCCAGATACTCACTTGAAAATAAAACATGAAAGACCTAATGGGACGGCTTTGATGACTCCAGGAGTAGGAGATTCTCCTAGTTCTAGATTAAAGACACCTGTAACAGCCAGCATTCCTAATTATATGTTTGCGGAAAAGCTTGTTCCCTTGTTGGTAGATCTTTTCCTACGGGCTCCAGCAGTTGAAAAGTATATCTTGTATCCTGAAATTATTCAAAGTCTTGGGAGGTGTATGACTACAAGAAGAGACAATCCAGATGGTTCTCTTTGGAGATTAGCTGTCGAAGGCTTCAATCGCATTCTTGTTGATGATGCCAGCAACTCGACTGTAAATGCTGGATCAGATTCAGGTGCTAGTAAGCCTGCAAGAACACGTATATGGAAGGAAGTTGCCGATGTTTATGAAGTATTCCTTGTGGGTTATTGTGGCCGAGCTCTTCCTTCTGATTCCTTCTCAACAGTGGATGTGAAAGCTGACGAGTCCCTTGAGATGACTATCTTGCACATTCTTGGCGACAAGATTTTGAAGTCACCAATTGATGCACCTATCGATATTTTGCAGCGTCTCGTTTCCACCTTGGACCGTTGTGCTTCACGTACTGGTTCTTTACCTGTTGATTTTGTGGAACGTATGCCTTCCCACTGCAGCAGGTTTTCCTTGATTTGCTTACAGAAGTTGTTTTCCTTGAGCAGTTATGACACCAAAGACCATGATTGGAATTCAGCGAGAGCTGAGGTGAGTAAAATTGCAATCATGGTACTGATGATGAGATGTGAATACATCTTAAGCAGATTTCTGAATGACGAAAATGATTTAGGTGGACGCGCATTGCCAGCAGCAAGGCTTGAAGAAATCATATATGTTCTTGAAGAGTTGGGCCGACTAGTAATTCATTCAGATACTGCATCCATTCTTCCCTTGCAACCATATTTGAAAGGTGCCCTATCAAGAGAAAAGAATCATGATAACCGTTCGCACCTTCTTGTTCTATTTCCATCCTTTTCTGAGCTCATAGTGTCAAGAGAAGCAAAAGTAAGAGCATCGGTGCAAGTCTTGTTTAGATTCATCAGCAAAGAATTGTCACTTGAAAGAGTTTCCCTTACCAGTCAAGCTGTGGAAGAATCTCAAAGGATACAGCAGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DCB DUF1981 Mon2_C Sec7_N

Protein Analysis

1662

Amino Acids

182.99

Weight (kDa)

5.76

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DCB PF16213 3 - 169 1.3e-38 Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain
Sec7-like_HUS PF12783 229 - 384 1.2e-19 Mon2/Sec7/BIG1-like, HUS domain
Sec7-like_HDS PF09324 800 - 866 8.4e-07 Mon2/Sec7/BIG1-like, HDS
Mon2_C PF16206 871 - 1138 2.2e-49 C-terminal region of Mon2 protein
Mon2_C PF16206 1321 - 1578 1.6e-13 C-terminal region of Mon2 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 101
AarI CACCTGC 1 cut(s) 707
AasI GACNNNNNNGTC 1 cut(s) 216
Acc16I TGCGCA 2 cut(s) 138, 449
Acc36I ACCTGC 5 cut(s) 707, 826, 2110, 2638, 4482
AccB1I GGYRCC 1 cut(s) 4781
AccB7I CCANNNNNTGG 1 cut(s) 575
AccI GTMKAC 2 cut(s) 220, 3584
AccII CGCG 3 cut(s) 36, 1875, 4668
AccIII TCCGGA 1 cut(s) 1400
AcoI YGGCCR 3 cut(s) 2209, 2516, 4270
AcsI RAATTY 7 cut(s) 1652, 1984, 2233, 2466, 2977, 3784, 4561
AcuI CTGAAG 2 cut(s) 1589, 2541
AdeI CACNNNGTG 3 cut(s) 1544, 1822, 2182
AfiI CCNNNNNNNGG 4 cut(s) 575, 1837, 2961, 3908
AflII CTTAAG 3 cut(s) 323, 1783, 4627
AflIII ACRYGT 2 cut(s) 739, 4214
AhdI GACNNNNNGTC 1 cut(s) 932
AhlI ACTAGT 3 cut(s) 1205, 3830, 4726
AjnI CCWGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
AjuI GAANNNNNNNTTGG 4 cut(s) 1335, 1367, 3769, 3801
AleI CACNNNNGTG 2 cut(s) 1919, 2389
AloI GAACNNNNNNTCC 4 cut(s) 808, 840, 3147, 3179
Alw21I GWGCWC 6 cut(s) 93, 2006, 2050, 2680, 4279, 4854
Alw26I GTCTC 8 cut(s) 509, 647, 1196, 1478, 2352, 3209, 4083, 4412
Alw44I GTGCAC 1 cut(s) 2046
AlwNI CAGNNNCTG 3 cut(s) 841, 2593, 4745
Ama87I CYCGRG 1 cut(s) 3147
Aor13HI TCCGGA 1 cut(s) 1400
ApaI GGGCCC 1 cut(s) 1832
ApaLI GTGCAC 1 cut(s) 2046
ApoI RAATTY 7 cut(s) 1652, 1984, 2233, 2466, 2977, 3784, 4561
Asp700I GAANNNNTTC 1 cut(s) 4053
AspLEI GCGC 9 cut(s) 38, 86, 139, 450, 512, 1877, 3364, 3726, 4670
AsuNHI GCTAGC 1 cut(s) 3824
AvaI CYCGRG 1 cut(s) 3147
AvaII GGWCC 7 cut(s) 432, 561, 759, 838, 1713, 2765, 4423
AxyI CCTNAGG 1 cut(s) 1073
BaeGI GKGCMC 3 cut(s) 1832, 2050, 4786
BaeI ACNNNNGTAYC 3 cut(s) 2352, 2385, 4967
BalI TGGCCA 2 cut(s) 2211, 2518
BanI GGYRCC 1 cut(s) 4781
BanII GRGCYC 5 cut(s) 1832, 2006, 4018, 4279, 4854
BarI GAAGNNNNNNTAC 2 cut(s) 2022, 2054
BauI CACGAG 2 cut(s) 214, 266
BbsI GAAGAC 4 cut(s) 702, 991, 1354, 1454
Bbv12I GWGCWC 6 cut(s) 93, 2006, 2050, 2680, 4279, 4854
BbvCI CCTCAGC 1 cut(s) 4575
BceAI ACGGC 5 cut(s) 42, 97, 901, 1932, 3903
BcgI CGANNNNNNTGC 2 cut(s) 3093, 3127
BciT130I CCWGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
BciVI GTATCC 3 cut(s) 2353, 4053, 4968
BclI TGATCA 2 cut(s) 496, 1738
BcoDI GTCTC 8 cut(s) 509, 647, 1196, 1478, 2352, 3209, 4083, 4412
BcuI ACTAGT 3 cut(s) 1205, 3830, 4726
BfoI RGCGCY 1 cut(s) 87
BfrI CTTAAG 3 cut(s) 323, 1783, 4627
BfuAI ACCTGC 5 cut(s) 707, 826, 2110, 2638, 4482
BfuI GTATCC 3 cut(s) 2353, 4053, 4968
BglI GCCNNNNNGGC 1 cut(s) 1045
BglII AGATCT 2 cut(s) 28, 4000
BlpI GCTNAGC 2 cut(s) 87, 2005
BmcAI AGTACT 2 cut(s) 3225, 3447
Bme1390I CCNGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
Bme18I GGWCC 7 cut(s) 432, 561, 759, 838, 1713, 2765, 4423
BmeRI GACNNNNNGTC 1 cut(s) 932
BmeT110I CYCGRG 1 cut(s) 3147
BmiI GGNNCC 8 cut(s) 434, 1271, 1714, 1830, 2187, 2953, 4017, 4783
BmrFI CCNGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
BmrI ACTGGG 2 cut(s) 2060, 2373
BmtI GCTAGC 1 cut(s) 3828
BmuI ACTGGG 2 cut(s) 2060, 2373
BpiI GAAGAC 4 cut(s) 702, 991, 1354, 1454
BpmI CTGGAG 5 cut(s) 564, 800, 2685, 3885, 4002
Bpu10I CCTNAGC 1 cut(s) 4575
Bpu1102I GCTNAGC 2 cut(s) 87, 2005
BpuEI CTTGAG 7 cut(s) 378, 1085, 2240, 2408, 3713, 4349, 4549
Bsa29I ATCGAT 2 cut(s) 2760, 4392
BsaAI YACGTR 6 cut(s) 740, 2252, 2450, 3683, 4217, 4439
BsaBI GATNNNNATC 4 cut(s) 1131, 2156, 2802, 4337
BsaWI WCCGGW 1 cut(s) 1400
BsaXI ACNNNNNCTCC 2 cut(s) 2177, 2207
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 1837, 2961, 3908
Bse118I RCCGGY 2 cut(s) 527, 1438
Bse21I CCTNAGG 1 cut(s) 1073
Bse3DI GCAATG 4 cut(s) 1100, 1800, 2075, 4670
Bse8I GATNNNNATC 4 cut(s) 1131, 2156, 2802, 4337
BseAI TCCGGA 1 cut(s) 1400
BseBI CCWGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
BseCI ATCGAT 2 cut(s) 2760, 4392
BseJI GATNNNNATC 4 cut(s) 1131, 2156, 2802, 4337
BseLI CCNNNNNNNGG 4 cut(s) 575, 1837, 2961, 3908
BseMI GCAATG 4 cut(s) 1100, 1800, 2075, 4670
BseRI GAGGAG 1 cut(s) 3165
BseSI GKGCMC 3 cut(s) 1832, 2050, 4786
BseYI CCCAGC 1 cut(s) 2078
BsgI GTGCAG 1 cut(s) 248
Bsh1236I CGCG 3 cut(s) 36, 1875, 4668
Bsh1285I CGRYCG 1 cut(s) 3085
BshNI GGYRCC 1 cut(s) 4781
BshVI ATCGAT 2 cut(s) 2760, 4392
BsiEI CGRYCG 1 cut(s) 3085
BsiHKAI GWGCWC 6 cut(s) 93, 2006, 2050, 2680, 4279, 4854
BsiHKCI CYCGRG 1 cut(s) 3147
BsiSI CCGG 4 cut(s) 528, 961, 1401, 1439
BslFI GGGAC 3 cut(s) 418, 3898, 4309
BslI CCNNNNNNNGG 4 cut(s) 575, 1837, 2961, 3908
BsmAI GTCTC 8 cut(s) 509, 647, 1196, 1478, 2352, 3209, 4083, 4412
BsmBI CGTCTC 2 cut(s) 2352, 4412
BsmFI GGGAC 3 cut(s) 418, 3898, 4309
BsmI GAATGC 3 cut(s) 1514, 3954, 4140
BsoBI CYCGRG 1 cut(s) 3147
Bsp120I GGGCCC 1 cut(s) 1828
Bsp1286I GDGCHC 9 cut(s) 93, 1832, 2006, 2050, 2680, 4018, 4279, 4786, 4854
Bsp13I TCCGGA 1 cut(s) 1400
Bsp1720I GCTNAGC 2 cut(s) 87, 2005
BspDI ATCGAT 2 cut(s) 2760, 4392
BspEI TCCGGA 1 cut(s) 1400
BspFNI CGCG 3 cut(s) 36, 1875, 4668
BspHI TCATGA 2 cut(s) 238, 4804
BspLI GGNNCC 8 cut(s) 434, 1271, 1714, 1830, 2187, 2953, 4017, 4783
BspMAI CTGCAG 7 cut(s) 336, 463, 718, 1300, 2029, 2635, 4490
BspMI ACCTGC 5 cut(s) 707, 826, 2110, 2638, 4482
BspOI GCTAGC 1 cut(s) 3828
BspQI GCTCTTC 2 cut(s) 1470, 4284
BspT107I GGYRCC 1 cut(s) 4781
BspTI CTTAAG 3 cut(s) 323, 1783, 4627
BsrDI GCAATG 4 cut(s) 1100, 1800, 2075, 4670
BsrFI RCCGGY 2 cut(s) 527, 1438
BssAI RCCGGY 2 cut(s) 527, 1438
BssNAI GTATAC 1 cut(s) 3585
BssSI CACGAG 2 cut(s) 214, 266
BssT1I CCWWGG 4 cut(s) 1332, 3232, 3411, 4419
Bst1107I GTATAC 1 cut(s) 3585
Bst2BI CACGAG 2 cut(s) 214, 266
Bst2UI CCWGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
Bst6I CTCTTC 8 cut(s) 525, 1206, 1470, 1799, 2560, 4081, 4284, 4707
BstAFI CTTAAG 3 cut(s) 323, 1783, 4627
BstAPI GCANNNNNTGC 4 cut(s) 841, 1229, 1292, 2675
BstBAI YACGTR 6 cut(s) 740, 2252, 2450, 3683, 4217, 4439
BstDSI CCRYGG 1 cut(s) 1914
BstFNI CGCG 3 cut(s) 36, 1875, 4668
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 9 cut(s) 38, 86, 139, 450, 512, 1877, 3364, 3726, 4670
BstMAI GTCTC 8 cut(s) 509, 647, 1196, 1478, 2352, 3209, 4083, 4412
BstMCI CGRYCG 1 cut(s) 3085
BstNI CCWGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
BstNSI RCATGY 5 cut(s) 1599, 1895, 2480, 3043, 3626
BstSCI CCNGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
BstSLI GKGCMC 3 cut(s) 1832, 2050, 4786
BstSNI TACGTA 2 cut(s) 2252, 3683
BstUI CGCG 3 cut(s) 36, 1875, 4668
BstV2I GAAGAC 4 cut(s) 702, 991, 1354, 1454
BstX2I RGATCY 7 cut(s) 28, 620, 722, 1068, 2093, 2456, 4000
BstXI CCANNNNNNTGG 2 cut(s) 802, 1153
BstYI RGATCY 7 cut(s) 28, 620, 722, 1068, 2093, 2456, 4000
BstZ17I GTATAC 1 cut(s) 3585
Bsu15I ATCGAT 2 cut(s) 2760, 4392
Bsu36I CCTNAGG 1 cut(s) 1073
BsuI GTATCC 3 cut(s) 2353, 4053, 4968
BsuTUI ATCGAT 2 cut(s) 2760, 4392
BtgI CCRYGG 1 cut(s) 1914
BtsI GCAGTG 1 cut(s) 4483
BveI ACCTGC 5 cut(s) 707, 826, 2110, 2638, 4482
CaiI CAGNNNCTG 3 cut(s) 841, 2593, 4745
CciI TCATGA 2 cut(s) 238, 4804
CfoI GCGC 9 cut(s) 38, 86, 139, 450, 512, 1877, 3364, 3726, 4670
Cfr10I RCCGGY 2 cut(s) 527, 1438
ClaI ATCGAT 2 cut(s) 2760, 4392
CseI GACGC 3 cut(s) 936, 4394, 4674
DraIII CACNNNGTG 3 cut(s) 1544, 1822, 2182
DrdI GACNNNNNNGTC 1 cut(s) 216
DriI GACNNNNNGTC 1 cut(s) 932
DseDI GACNNNNNNGTC 1 cut(s) 216
EaeI YGGCCR 3 cut(s) 2209, 2516, 4270
Eam1104I CTCTTC 8 cut(s) 525, 1206, 1470, 1799, 2560, 4081, 4284, 4707
Eam1105I GACNNNNNGTC 1 cut(s) 932
EarI CTCTTC 8 cut(s) 525, 1206, 1470, 1799, 2560, 4081, 4284, 4707
EciI GGCGGA 2 cut(s) 34, 2789
Ecl136II GAGCTC 3 cut(s) 2004, 4277, 4852
Eco105I TACGTA 2 cut(s) 2252, 3683
Eco130I CCWWGG 4 cut(s) 1332, 3232, 3411, 4419
Eco147I AGGCCT 3 cut(s) 1583, 1781, 2718
Eco24I GRGCYC 5 cut(s) 1832, 2006, 4018, 4279, 4854
Eco32I GATATC 2 cut(s) 1577, 2154
Eco47I GGWCC 7 cut(s) 432, 561, 759, 838, 1713, 2765, 4423
Eco53kI GAGCTC 3 cut(s) 2004, 4277, 4852
Eco57I CTGAAG 2 cut(s) 1589, 2541
Eco81I CCTNAGG 1 cut(s) 1073
Eco88I CYCGRG 1 cut(s) 3147
EcoICRI GAGCTC 3 cut(s) 2004, 4277, 4852
EcoO109I RGGNCCY 2 cut(s) 432, 838
EcoRI GAATTC 3 cut(s) 1984, 3784, 4561
EcoRII CCWGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
EcoRV GATATC 2 cut(s) 1577, 2154
EcoT14I CCWWGG 4 cut(s) 1332, 3232, 3411, 4419
EcoT22I ATGCAT 4 cut(s) 1288, 1516, 2075, 2272
EcoT38I GRGCYC 5 cut(s) 1832, 2006, 4018, 4279, 4854
ErhI CCWWGG 4 cut(s) 1332, 3232, 3411, 4419
Esp3I CGTCTC 2 cut(s) 2352, 4412
FalI AAGNNNNNCTT 8 cut(s) 1335, 1367, 3404, 3436, 4022, 4054, 4239, 4271
FaqI GGGAC 3 cut(s) 418, 3898, 4309
FauI CCCGC 1 cut(s) 2589
FauNDI CATATG 1 cut(s) 3168
FbaI TGATCA 2 cut(s) 496, 1738
FblI GTMKAC 2 cut(s) 220, 3584
FriOI GRGCYC 5 cut(s) 1832, 2006, 4018, 4279, 4854
FspI TGCGCA 2 cut(s) 138, 449
GlaI GCGC 9 cut(s) 37, 85, 138, 449, 511, 1876, 3363, 3725, 4669
GsaI CCCAGC 1 cut(s) 2082
GsuI CTGGAG 5 cut(s) 564, 800, 2685, 3885, 4002
HaeII RGCGCY 1 cut(s) 87
HapII CCGG 4 cut(s) 528, 961, 1401, 1439
HgaI GACGC 3 cut(s) 936, 4394, 4674
HhaI GCGC 9 cut(s) 38, 86, 139, 450, 512, 1877, 3364, 3726, 4670
Hin6I GCGC 9 cut(s) 36, 84, 137, 448, 510, 1875, 3362, 3724, 4668
HinP1I GCGC 9 cut(s) 36, 84, 137, 448, 510, 1875, 3362, 3724, 4668
HincII GTYRAC 4 cut(s) 1500, 2443, 2902, 3480
HindII GTYRAC 4 cut(s) 1500, 2443, 2902, 3480
HindIII AAGCTT 5 cut(s) 227, 533, 674, 2945, 3980
HpaII CCGG 4 cut(s) 528, 961, 1401, 1439
Hpy99I CGWCG 2 cut(s) 63, 930
HpyCH4IV ACGT 7 cut(s) 739, 2251, 2449, 3682, 4216, 4438, 4471
HpySE526I ACGT 7 cut(s) 739, 2251, 2449, 3682, 4216, 4438, 4471
HspAI GCGC 9 cut(s) 36, 84, 137, 448, 510, 1875, 3362, 3724, 4668
Kpn2I TCCGGA 1 cut(s) 1400
KroI GCCGGC 1 cut(s) 527
KroNI GCCGGC 1 cut(s) 529
Ksp22I TGATCA 2 cut(s) 496, 1738
LguI GCTCTTC 2 cut(s) 1470, 4284
LmnI GCTCC 8 cut(s) 111, 892, 1269, 1689, 2185, 2666, 2951, 4021
MaeII ACGT 7 cut(s) 739, 2251, 2449, 3682, 4216, 4438, 4471
MfeI CAATTG 2 cut(s) 2819, 4377
MflI RGATCY 7 cut(s) 28, 620, 722, 1068, 2093, 2456, 4000
MhlI GDGCHC 9 cut(s) 93, 1832, 2006, 2050, 2680, 4018, 4279, 4786, 4854
MlsI TGGCCA 2 cut(s) 2211, 2518
MluNI TGGCCA 2 cut(s) 2211, 2518
MlyI GAGTC 9 cut(s) 32, 204, 511, 617, 2438, 2546, 3317, 3892, 4331
MmeI TCCRAC 4 cut(s) 819, 1539, 2101, 3740
Mox20I TGGCCA 2 cut(s) 2211, 2518
Mph1103I ATGCAT 4 cut(s) 1288, 1516, 2075, 2272
MroI TCCGGA 1 cut(s) 1400
MroNI GCCGGC 1 cut(s) 527
MroXI GAANNNNTTC 1 cut(s) 4053
MscI TGGCCA 2 cut(s) 2211, 2518
MslI CAYNNNNRTG 5 cut(s) 1919, 2068, 2389, 3704, 4219
Msp20I TGGCCA 2 cut(s) 2211, 2518
MspA1I CMGCKG 4 cut(s) 757, 1226, 1993, 2984
MspCI CTTAAG 3 cut(s) 323, 1783, 4627
MspI CCGG 4 cut(s) 528, 961, 1401, 1439
MspR9I CCNGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
MunI CAATTG 2 cut(s) 2819, 4377
Mva1269I GAATGC 3 cut(s) 1514, 3954, 4140
MvaI CCWGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
MvnI CGCG 3 cut(s) 36, 1875, 4668
NaeI GCCGGC 1 cut(s) 529
NdeI CATATG 1 cut(s) 3168
NgoMIV GCCGGC 1 cut(s) 527
NheI GCTAGC 1 cut(s) 3824
NlaIV GGNNCC 8 cut(s) 434, 1271, 1714, 1830, 2187, 2953, 4017, 4783
NmeAIII GCCGAG 2 cut(s) 73, 4298
NsbI TGCGCA 2 cut(s) 138, 449
NsiI ATGCAT 4 cut(s) 1288, 1516, 2075, 2272
NspI RCATGY 5 cut(s) 1599, 1895, 2480, 3043, 3626
OliI CACNNNNGTG 2 cut(s) 1919, 2389
PaeI GCATGC 2 cut(s) 1599, 1895
PaeR7I CTCGAG 1 cut(s) 3147
PagI TCATGA 2 cut(s) 238, 4804
PaqCI CACCTGC 1 cut(s) 707
PceI AGGCCT 3 cut(s) 1583, 1781, 2718
PciSI GCTCTTC 2 cut(s) 1470, 4284
PctI GAATGC 3 cut(s) 1514, 3954, 4140
PdiI GCCGGC 1 cut(s) 529
PdmI GAANNNNTTC 1 cut(s) 4053
PflMI CCANNNNNTGG 1 cut(s) 575
PfoI TCCNGGA 1 cut(s) 3901
Ple19I CGATCG 1 cut(s) 3085
PleI GAGTC 9 cut(s) 31, 204, 511, 616, 2438, 2546, 3316, 3892, 4330
PpsI GAGTC 9 cut(s) 31, 204, 511, 616, 2438, 2546, 3316, 3892, 4330
Ppu21I YACGTR 6 cut(s) 740, 2252, 2450, 3683, 4217, 4439
PpuMI RGGWCCY 2 cut(s) 432, 838
PsiI TTATAA 1 cut(s) 101
Psp124BI GAGCTC 3 cut(s) 2006, 4279, 4854
Psp5II RGGWCCY 2 cut(s) 432, 838
Psp6I CCWGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
PspFI CCCAGC 1 cut(s) 2078
PspGI CCWGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
PspN4I GGNNCC 8 cut(s) 434, 1271, 1714, 1830, 2187, 2953, 4017, 4783
PspOMI GGGCCC 1 cut(s) 1828
PspPPI RGGWCCY 2 cut(s) 432, 838
PspXI VCTCGAGB 1 cut(s) 3147
PstI CTGCAG 7 cut(s) 336, 463, 718, 1300, 2029, 2635, 4490
PstNI CAGNNNCTG 3 cut(s) 841, 2593, 4745
PsuI RGATCY 7 cut(s) 28, 620, 722, 1068, 2093, 2456, 4000
PvuI CGATCG 1 cut(s) 3085
PvuII CAGCTG 2 cut(s) 1226, 1993
RseI CAYNNNNRTG 5 cut(s) 1919, 2068, 2389, 3704, 4219
SacI GAGCTC 3 cut(s) 2006, 4279, 4854
SapI GCTCTTC 2 cut(s) 1470, 4284
ScaI AGTACT 2 cut(s) 3225, 3447
SchI GAGTC 9 cut(s) 32, 204, 511, 617, 2438, 2546, 3317, 3892, 4331
ScrFI CCNGG 8 cut(s) 126, 1220, 1592, 1710, 1778, 1837, 2769, 3903
SduI GDGCHC 9 cut(s) 93, 1832, 2006, 2050, 2680, 4018, 4279, 4786, 4854
Sfr274I CTCGAG 1 cut(s) 3147
SinI GGWCC 7 cut(s) 432, 561, 759, 838, 1713, 2765, 4423
SlaI CTCGAG 1 cut(s) 3147
SmiMI CAYNNNNRTG 5 cut(s) 1919, 2068, 2389, 3704, 4219
SnaBI TACGTA 2 cut(s) 2252, 3683
SpeI ACTAGT 3 cut(s) 1205, 3830, 4726
SphI GCATGC 2 cut(s) 1599, 1895
SseBI AGGCCT 3 cut(s) 1583, 1781, 2718
SspI AATATT 3 cut(s) 351, 1969, 2524
SstI GAGCTC 3 cut(s) 2006, 4279, 4854
StuI AGGCCT 3 cut(s) 1583, 1781, 2718
StyD4I CCNGG 8 cut(s) 124, 1218, 1590, 1708, 1776, 1835, 2767, 3901
StyI CCWWGG 4 cut(s) 1332, 3232, 3411, 4419
TaiI ACGT 7 cut(s) 742, 2254, 2452, 3685, 4219, 4441, 4474
TaqI TCGA 9 cut(s) 925, 1341, 2760, 3081, 3113, 3148, 4125, 4166, 4392
TaqII GACCGA 2 cut(s) 320, 3852
TatI WGTACW 3 cut(s) 3223, 3445, 3676
TspGWI ACGGA 2 cut(s) 98, 1397
Van91I CCANNNNNTGG 1 cut(s) 575
Vha464I CTTAAG 3 cut(s) 323, 1783, 4627
VneI GTGCAC 1 cut(s) 2046
VpaK11BI GGWCC 7 cut(s) 432, 561, 759, 838, 1713, 2765, 4423
XapI RAATTY 7 cut(s) 1652, 1984, 2233, 2466, 2977, 3784, 4561
XbaI TCTAGA 2 cut(s) 421, 3926
XceI RCATGY 5 cut(s) 1599, 1895, 2480, 3043, 3626
XcmI CCANNNNNNNNNTGG 1 cut(s) 4954
XhoI CTCGAG 1 cut(s) 3147
XmiI GTMKAC 2 cut(s) 220, 3584
XmnI GAANNNNTTC 1 cut(s) 4053
ZrmI AGTACT 2 cut(s) 3225, 3447
Zsp2I ATGCAT 4 cut(s) 1288, 1516, 2075, 2272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.