Rorug01G0032000

Integrator complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002505
Physical Location & Seq
Forward (+)
5417489 .. 5424641
7153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0032000.1

Sequence Viewer

Length: 2979 bp
ATGGCTTCTGAATTGAACTACATGCCTTGGGGGGCTAAGGAAAAGATACGAGTAGCTCTCTATGTGCAGAAAGCAGCATTGCAATTCATCGATGCTGGTAATAAAGAAGCTGGATACAGTCTTTCCAAAGAAGTTAGTGATGCTGGTTTTGGCATTTCACCTGATGAGCTTGCATCCTTTGCGCGAACCCATGATACCAAGGGTGTGGAAGCACGAGGAGGAGTAGCAGGACTAGCAGGAGATATATCAGTATCCTTGAAAGAAGGCGTTGTTTCAAGCAAGATACCTGTTAGGCAAAACATATATGGCCTCAACCGATTTGTGGAGAAGCCTTCTAAAGGTTTTTGGATGTTTGTCTGGGAAGCCATACAAGATTTAACTCTAATCATCCTTATGGTTTCTGCTGTGGTCTCTATTGGCGTTGGCATTGCAACTGAAGGGTGGCCAAAGGGTATGTATGATGGGTTGGGTATAATATTGAGCATCTTATTGGTTGTGATGGTCACTGCAATCAGTGACTACAGGCAATCTTTGCAATTCAAAGAACTGGATAAGGAGAAAAAAAATATAAAGATTCAGGTAACTAGAGATGGACGCAGACAGAAGGTTTCTATCTACGATTTGGTGGTTGGAGATATTGTTCATCTTTCAATTGGAGACCAAGTTCCAGCTGATGGCCTTCTCATATCAGGCCACAGCTTACAAATTGATGAATCAAGCTTGTCAGGTGAGAGCGAGCCAGTGGACATAAATCAAAAGAGACCTTTTATTCTTGGGGGAACCAAAGTGCAAGATGGCTCTGGTAAAATGCTAGTTACATCTGTTGGTATGAGGACTGAATGGGGACGACTAATGGTTACTCTGAGTGAAGGAGGAGACAATGAGACACCACTGCAGGTGAAACTCAATGGTGTTGCTACCATTATTGGAAAAATTGGTTTGGCTTTTGCAGCTGTCACATTTGTAGTTCTGACTACGAGGTACTTAGTTAACAAGGGAACGCACCATAACATGACTAACTGGTCTATGAAAGATGCATCAGCACTTTTGAGTTACTTTTCTACTGCAGTTATCATAATAGTTGTTGCTGTTCCAGAGGGGCTTCCTCTGGCAGTGACACTGAGTCTTGCCTTTGCAATGAAAAAGCTAATGGGTGACAAGGCACTTGTGAGGCATCTTTCAGCATGTGAGACGATGGGCTCTGCTAGTTGTATTTGCACAGATAAGACGGGAACCTTGACAACAAATCATATGGTGGTGAATAAGATATGGATATGTGACGAAGCCAAGACTATAACGAGTGCTCAGAACAAAGATGTATTGAAGTCAGTTTCTGAAAAAGTTTATAACATTCTTTTGCAGTCTATCTTTCTGAATACAACCTCAGAGGTAGTAAAAGGGGAAGATGGGAAAAATACTGTTATAGGTACTCCAACAGAGATGGCTATAGTAGAATTTGGCATGCTTCTGGGAGGTGATTTTAAATCTTTTAGTGAGGAGTATAAGATAGTTATGGTCGAACCATTCAATTCAATCAGAAAAAAGATGTCGGTTCAAGTGGCTCTTCCTGGTAGTGATATGTGTCGAGCATTCTGCAAAGGAGCATCAGAAATTATTTTAGGAATGTGTGACAAGGTTGTCAATACTGATGGTGAAGCTATGCCTTTGTCTGAGGAGCAGAGAAAGAAAATATCTGATGTCATAAATGGTTTTGCTTGTGAAGCTTTAAGAACTCTATGCGTAGCTTTCAAGGATATAGAGGACCCTTCTAGTGCAAAAAGTATTCCTGAAGATAAATATACATTAATAGCTGTTGTGGGAATTAAGGATCCTGTGCGCCCTGCAGTGAGGGAAGCCGTGAAGACTTGTTTAGATGCTGGGATTACTGTACGGATGGTCACTGGTGATAATATCAATACAGCTAAAGCCATAGCTAAAGAGTGTGGCATTTTGACAGAAGATGGTTTAGCTATAGAAGGGCCAGATTTCCGAAAAATGAGCCAACAGGAGATGGCAGAAATAATCCCAAAACTGCAGGTAATGGCACGATCCTTGCCTTTGGACAAGCACACTTTAGTGAAGCAGTTGAGGAATGTGCATAAAGAAGTAGTGGCAGTAACTGGTGATGGGACTAATGATGCTCCTGCTTTGCACGAGGCAGACATTGGACTCGCTATGGGTATAGCCGGAACAGAGGTTGCAAAAGAAAATGCTGATGTTATCATTATGGATGACAACTTTACAAGTATAGTGAATGTTGCAAGATGGGGTCGTTCAGTTTATATCAACATTCAAAAGTTTGTTCAGTTCCAGTTAACGGTTAATATTGTCGCTCTGATGCTCAATTTCGTATCAGCATGCGTCTCAGGATCAGCTCCTCTCACTGCTGTCCAGATGCTTTGGGTAAACTTGATTATGGATACTCTTGGTGCTTTGGCACTGGCTACAGAGCCACCGCATGATGGCCTTATGAAAAGACCACCAGTTGGAAGGAATATTAAATTCATCACTGGGATCATGTGGAGGAATATTATCGGTCAGAGTATCTATCAAATTGCTGTCCTTCTGGTTCTTAATTTTTGTGGGAAACGTCTTTTAAAACTCACCGGTCCAAATGCAAGTTCCACTCTCAAGACCTTCATATTCAACTGTTTTGTATTTTGCCAGGTATTCAACGAGATTAACAGCCGTGATATGGAGAAAATCAATGTGTTCAGAGGGATGTTTAATAGTTATACTTTCATGATAGTGATGATCTGCACAGTAGTTTTCCAGATCATAATAGTTGAATTTTTGGGCACTTTTGCTCAAACTGTGCCACTGAGCTGGAAGTTGTGGTTAGCAAGCGTCTTGATTGGAGCCGTAAGTTTACCGGTTGCTGTTGTCTTGAAGTGCATTCCTGTATCATTAAGGAAACAAGCTGCTAAGGATCACAGTGATATCCACGAACCTCTTCTCCGTGGCCCTGAGCTGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Beta-Casp Lactamase_B_6

Protein Analysis

992

Amino Acids

107.94

Weight (kDa)

7.16

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 72 - 138 2.1e-10 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 191 - 285 1e-22 P-type ATPase actuator domain
Cation_ATPase PF13246 451 - 614 5.4e-33 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 599 - 721 1.5e-11 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 792 - 965 2.5e-41 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1347
AarI CACCTGC 1 cut(s) 886
AasI GACNNNNNNGTC 2 cut(s) 1021, 1637
Acc36I ACCTGC 2 cut(s) 886, 2026
AccB7I CCANNNNNTGG 2 cut(s) 674, 2486
AccII CGCG 1 cut(s) 184
AciI CCGC 1 cut(s) 2456
AclWI GGATC 6 cut(s) 1823, 1836, 2043, 2377, 2522, 2937
AcoI YGGCCR 1 cut(s) 443
AcsI RAATTY 3 cut(s) 1454, 2501, 2789
AcuI CTGAAG 2 cut(s) 456, 1809
AfaI GTAC 3 cut(s) 983, 1429, 1890
AfiI CCNNNNNNNGG 8 cut(s) 322, 338, 674, 2317, 2462, 2486, 2695, 2971
AgeI ACCGGT 2 cut(s) 2606, 2872
AhdI GACNNNNNGTC 1 cut(s) 1122
AjnI CCWGG 2 cut(s) 1567, 2664
AjuI GAANNNNNNNTTGG 2 cut(s) 2605, 2637
AleI CACNNNNGTG 1 cut(s) 2075
AloI GAACNNNNNNTCC 6 cut(s) 624, 648, 656, 680, 2940, 2972
Alw21I GWGCWC 1 cut(s) 1306
Alw26I GTCTC 7 cut(s) 415, 651, 754, 870, 878, 1184, 2368
AlwI GGATC 6 cut(s) 1823, 1836, 2043, 2377, 2522, 2937
AlwNI CAGNNNCTG 2 cut(s) 1334, 2120
AoxI GGCC 7 cut(s) 307, 443, 676, 691, 1979, 2464, 2962
ApeKI GCWGC 3 cut(s) 74, 950, 2921
ApoI RAATTY 3 cut(s) 1454, 2501, 2789
AseI ATTAAT 1 cut(s) 1805
AsiGI ACCGGT 2 cut(s) 2606, 2872
Asp700I GAANNNNTTC 1 cut(s) 2952
AspLEI GCGC 2 cut(s) 184, 1839
AspS9I GGNCC 4 cut(s) 1762, 1979, 2609, 2963
AvaII GGWCC 2 cut(s) 1762, 2609
BaeGI GKGCMC 1 cut(s) 2801
BalI TGGCCA 1 cut(s) 445
BamHI GGATCC 1 cut(s) 1828
BanII GRGCYC 1 cut(s) 1202
BauI CACGAG 2 cut(s) 213, 2153
BbsI GAAGAC 1 cut(s) 1868
Bbv12I GWGCWC 1 cut(s) 1306
BbvI GCAGC 3 cut(s) 86, 962, 2908
BceAI ACGGC 3 cut(s) 1841, 2673, 2846
BcgI CGANNNNNNTGC 2 cut(s) 1575, 1609
BciT130I CCWGG 2 cut(s) 1569, 2666
BciVI GTATCC 3 cut(s) 107, 262, 2413
BcoDI GTCTC 7 cut(s) 415, 651, 754, 870, 878, 1184, 2368
BfaI CTAG 5 cut(s) 233, 585, 812, 1206, 1770
BfmI CTRYAG 8 cut(s) 520, 893, 1065, 1446, 1842, 1971, 2033, 2445
BfuAI ACCTGC 2 cut(s) 886, 2026
BfuI GTATCC 3 cut(s) 107, 262, 2413
BisI GCNGC 3 cut(s) 75, 951, 2922
BlsI GCNGC 3 cut(s) 76, 952, 2923
Bme1390I CCNGG 2 cut(s) 1569, 2666
Bme18I GGWCC 2 cut(s) 1762, 2609
BmeRI GACNNNNNGTC 1 cut(s) 1122
BmgT120I GGNCC 4 cut(s) 1762, 1979, 2609, 2963
BmiI GGNNCC 5 cut(s) 781, 1234, 1764, 1830, 2860
BmrFI CCNGG 2 cut(s) 1569, 2666
BmrI ACTGGG 1 cut(s) 2520
BmuI ACTGGG 1 cut(s) 2520
BpiI GAAGAC 1 cut(s) 1868
BplI GAGNNNNNCTC 2 cut(s) 42, 74
Bpu10I CCTNAGC 3 cut(s) 36, 2925, 2967
BpuEI CTTGAG 1 cut(s) 2615
Bsa29I ATCGAT 1 cut(s) 90
BsaI GGTCTC 3 cut(s) 415, 651, 754
BsaJI CCNNGG 3 cut(s) 26, 198, 2959
BsaWI WCCGGW 2 cut(s) 2606, 2872
BsaXI ACNNNNNCTCC 6 cut(s) 624, 648, 654, 678, 2940, 2970
Bsc4I CCNNNNNNNGG 8 cut(s) 322, 338, 674, 2317, 2462, 2486, 2695, 2971
Bse118I RCCGGY 2 cut(s) 2606, 2872
Bse1I ACTGG 9 cut(s) 552, 740, 1025, 1906, 2125, 2311, 2445, 2483, 2515
Bse3DI GCAATG 3 cut(s) 77, 426, 1143
BseBI CCWGG 2 cut(s) 1569, 2666
BseCI ATCGAT 1 cut(s) 90
BseDI CCNNGG 3 cut(s) 26, 198, 2959
BseGI GGATG 6 cut(s) 173, 354, 387, 1899, 2236, 2727
BseLI CCNNNNNNNGG 8 cut(s) 322, 338, 674, 2317, 2462, 2486, 2695, 2971
BseMI GCAATG 3 cut(s) 77, 426, 1143
BseMII CTCAG 8 cut(s) 854, 1112, 1319, 1398, 1662, 2379, 2813, 2958
BseNI ACTGG 9 cut(s) 552, 740, 1025, 1906, 2125, 2311, 2445, 2483, 2515
BseRI GAGGAG 6 cut(s) 231, 234, 888, 1511, 1688, 2367
BseSI GKGCMC 1 cut(s) 2801
BseXI GCAGC 3 cut(s) 86, 962, 2908
BseYI CCCAGC 1 cut(s) 1877
BsgI GTGCAG 2 cut(s) 86, 2743
Bsh1236I CGCG 1 cut(s) 184
BshFI GGCC 7 cut(s) 309, 445, 678, 693, 1981, 2466, 2964
BshTI ACCGGT 2 cut(s) 2606, 2872
BshVI ATCGAT 1 cut(s) 90
BsiHKAI GWGCWC 1 cut(s) 1306
BsiSI CCGG 3 cut(s) 2187, 2607, 2873
BslFI GGGAC 2 cut(s) 858, 2143
BslI CCNNNNNNNGG 8 cut(s) 322, 338, 674, 2317, 2462, 2486, 2695, 2971
BsmAI GTCTC 7 cut(s) 415, 651, 754, 870, 878, 1184, 2368
BsmBI CGTCTC 2 cut(s) 1184, 2368
BsmFI GGGAC 2 cut(s) 858, 2143
BsmI GAATGC 2 cut(s) 1589, 2895
BsnI GGCC 7 cut(s) 309, 445, 678, 693, 1981, 2466, 2964
Bso31I GGTCTC 3 cut(s) 415, 651, 754
Bsp1286I GDGCHC 3 cut(s) 1202, 1306, 2801
Bsp143I GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
BspACI CCGC 1 cut(s) 2456
BspANI GGCC 7 cut(s) 309, 445, 678, 693, 1981, 2466, 2964
BspCNI CTCAG 8 cut(s) 855, 1113, 1318, 1397, 1663, 2378, 2814, 2959
BspDI ATCGAT 1 cut(s) 90
BspFNI CGCG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 2742
BspLI GGNNCC 5 cut(s) 781, 1234, 1764, 1830, 2860
BspMAI CTGCAG 4 cut(s) 897, 1069, 1846, 2037
BspMI ACCTGC 2 cut(s) 886, 2026
BspPI GGATC 6 cut(s) 1823, 1836, 2043, 2377, 2522, 2937
BspQI GCTCTTC 1 cut(s) 1569
BspTNI GGTCTC 3 cut(s) 415, 651, 754
BsrDI GCAATG 3 cut(s) 77, 426, 1143
BsrFI RCCGGY 2 cut(s) 2606, 2872
BsrI ACTGG 9 cut(s) 552, 740, 1025, 1906, 2125, 2311, 2445, 2483, 2515
BssAI RCCGGY 2 cut(s) 2606, 2872
BssECI CCNNGG 3 cut(s) 26, 198, 2959
BssMI GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
BssSI CACGAG 2 cut(s) 213, 2153
BssT1I CCWWGG 2 cut(s) 26, 198
Bst2BI CACGAG 2 cut(s) 213, 2153
Bst2UI CCWGG 2 cut(s) 1569, 2666
Bst4CI ACNGT 8 cut(s) 119, 1420, 1888, 2320, 2651, 2764, 2815, 2936
Bst6I CTCTTC 2 cut(s) 1569, 2958
BstAPI GCANNNNNTGC 2 cut(s) 179, 532
BstC8I GCNNGC 6 cut(s) 171, 737, 1463, 2359, 2845, 2973
BstDSI CCRYGG 1 cut(s) 2959
BstENI CCTNNNNNAGG 1 cut(s) 336
BstF5I GGATG 6 cut(s) 173, 354, 387, 1899, 2236, 2727
BstFNI CGCG 1 cut(s) 184
BstHHI GCGC 2 cut(s) 184, 1839
BstKTI GATC 7 cut(s) 1831, 2051, 2372, 2517, 2757, 2778, 2932
BstMAI GTCTC 7 cut(s) 415, 651, 754, 870, 878, 1184, 2368
BstMBI GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
BstMWI GCNNNNNNNGC 5 cut(s) 179, 233, 532, 950, 1721
BstNI CCWGG 2 cut(s) 1569, 2666
BstNSI RCATGY 4 cut(s) 25, 1188, 1465, 2361
BstSCI CCNGG 2 cut(s) 1567, 2664
BstSFI CTRYAG 8 cut(s) 520, 893, 1065, 1446, 1842, 1971, 2033, 2445
BstSLI GKGCMC 1 cut(s) 2801
BstUI CGCG 1 cut(s) 184
BstV1I GCAGC 3 cut(s) 86, 962, 2908
BstV2I GAAGAC 1 cut(s) 1868
BstX2I RGATCY 1 cut(s) 1828
BstXI CCANNNNNNTGG 2 cut(s) 205, 2826
BstYI RGATCY 1 cut(s) 1828
Bsu15I ATCGAT 1 cut(s) 90
BsuI GTATCC 3 cut(s) 107, 262, 2413
BsuRI GGCC 7 cut(s) 309, 445, 678, 693, 1981, 2466, 2964
BsuTUI ATCGAT 1 cut(s) 90
BtgI CCRYGG 1 cut(s) 2959
BtsCI GGATG 6 cut(s) 173, 354, 387, 1899, 2236, 2727
BtsI GCAGTG 5 cut(s) 504, 890, 1119, 1851, 2382
BveI ACCTGC 2 cut(s) 886, 2026
Cac8I GCNNGC 6 cut(s) 171, 737, 1463, 2359, 2845, 2973
CaiI CAGNNNCTG 2 cut(s) 1334, 2120
CciI TCATGA 1 cut(s) 2742
CfoI GCGC 2 cut(s) 184, 1839
Cfr10I RCCGGY 2 cut(s) 2606, 2872
Cfr13I GGNCC 4 cut(s) 1762, 1979, 2609, 2963
ClaI ATCGAT 1 cut(s) 90
CseI GACGC 3 cut(s) 603, 2350, 2836
Csp6I GTAC 3 cut(s) 982, 1428, 1889
CspAI ACCGGT 2 cut(s) 2606, 2872
CviAII CATG 9 cut(s) 22, 191, 1012, 1185, 1462, 2358, 2459, 2518, 2743
CviQI GTAC 3 cut(s) 982, 1428, 1889
DpnI GATC 7 cut(s) 1830, 2050, 2371, 2516, 2756, 2777, 2931
DpnII GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
DraI TTTAAA 2 cut(s) 1483, 2598
DrdI GACNNNNNNGTC 2 cut(s) 1021, 1637
DriI GACNNNNNGTC 1 cut(s) 1122
DseDI GACNNNNNNGTC 2 cut(s) 1021, 1637
EaeI YGGCCR 1 cut(s) 443
Eam1104I CTCTTC 2 cut(s) 1569, 2958
Eam1105I GACNNNNNGTC 1 cut(s) 1122
EarI CTCTTC 2 cut(s) 1569, 2958
Eco130I CCWWGG 2 cut(s) 26, 198
Eco24I GRGCYC 1 cut(s) 1202
Eco31I GGTCTC 3 cut(s) 415, 651, 754
Eco32I GATATC 1 cut(s) 2941
Eco47I GGWCC 2 cut(s) 1762, 2609
Eco57I CTGAAG 2 cut(s) 456, 1809
EcoNI CCTNNNNNAGG 1 cut(s) 336
EcoO109I RGGNCCY 1 cut(s) 1762
EcoRII CCWGG 2 cut(s) 1567, 2664
EcoRV GATATC 1 cut(s) 2941
EcoT14I CCWWGG 2 cut(s) 26, 198
EcoT22I ATGCAT 1 cut(s) 1039
EcoT38I GRGCYC 1 cut(s) 1202
ErhI CCWWGG 2 cut(s) 26, 198
Esp3I CGTCTC 2 cut(s) 1184, 2368
FaeI CATG 9 cut(s) 25, 194, 1015, 1188, 1465, 2361, 2462, 2521, 2746
FalI AAGNNNNNCTT 2 cut(s) 1548, 1580
FaqI GGGAC 2 cut(s) 858, 2143
FatI CATG 9 cut(s) 21, 190, 1011, 1184, 1461, 2357, 2458, 2517, 2742
FauNDI CATATG 1 cut(s) 1251
Fnu4HI GCNGC 3 cut(s) 75, 951, 2922
FokI GGATG 6 cut(s) 160, 361, 374, 1906, 2243, 2734
FriOI GRGCYC 1 cut(s) 1202
Fsp4HI GCNGC 3 cut(s) 75, 951, 2922
FspBI CTAG 5 cut(s) 233, 585, 812, 1206, 1770
GlaI GCGC 2 cut(s) 183, 1838
GluI GCNGC 3 cut(s) 75, 951, 2922
GsaI CCCAGC 1 cut(s) 1881
HaeIII GGCC 7 cut(s) 309, 445, 678, 693, 1981, 2466, 2964
HapII CCGG 3 cut(s) 2187, 2607, 2873
HgaI GACGC 3 cut(s) 603, 2350, 2836
HhaI GCGC 2 cut(s) 184, 1839
Hin1II CATG 9 cut(s) 25, 194, 1015, 1188, 1465, 2361, 2462, 2521, 2746
Hin6I GCGC 2 cut(s) 182, 1837
HinP1I GCGC 2 cut(s) 182, 1837
HincII GTYRAC 2 cut(s) 991, 2316
HindII GTYRAC 2 cut(s) 991, 2316
HindIII AAGCTT 2 cut(s) 718, 1722
HinfI GANTC 4 cut(s) 574, 713, 1123, 2169
HpaI GTTAAC 2 cut(s) 991, 2316
HpaII CCGG 3 cut(s) 2187, 2607, 2873
Hpy166II GTNNAC 5 cut(s) 745, 991, 2316, 2407, 2870
Hpy188III TCNNGA 9 cut(s) 1094, 1787, 2367, 2392, 2632, 2743, 2773, 2851, 2887
Hpy8I GTNNAC 5 cut(s) 745, 991, 2316, 2407, 2870
HpyCH4III ACNGT 8 cut(s) 119, 1420, 1888, 2320, 2651, 2764, 2815, 2936
HpyCH4IV ACGT 1 cut(s) 2590
HpyF10VI GCNNNNNNNGC 5 cut(s) 179, 233, 532, 950, 1721
HpySE526I ACGT 1 cut(s) 2590
Hsp92II CATG 9 cut(s) 25, 194, 1015, 1188, 1465, 2361, 2462, 2521, 2746
HspAI GCGC 2 cut(s) 182, 1837
KspAI GTTAAC 2 cut(s) 991, 2316
Kzo9I GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
LguI GCTCTTC 1 cut(s) 1569
LmnI GCTCC 5 cut(s) 1601, 1675, 2146, 2380, 2858
Lsp1109I GCAGC 3 cut(s) 86, 962, 2908
MaeI CTAG 5 cut(s) 233, 585, 812, 1206, 1770
MaeII ACGT 1 cut(s) 2590
MalI GATC 7 cut(s) 1830, 2050, 2371, 2516, 2756, 2777, 2931
MboI GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
MboII GAAGA 6 cut(s) 1415, 1556, 1802, 1873, 1970, 2945
MfeI CAATTG 1 cut(s) 651
MflI RGATCY 1 cut(s) 1828
MhlI GDGCHC 3 cut(s) 1202, 1306, 2801
MlsI TGGCCA 1 cut(s) 445
MluNI TGGCCA 1 cut(s) 445
MlyI GAGTC 2 cut(s) 1132, 2163
MmeI TCCRAC 3 cut(s) 610, 1457, 2467
Mox20I TGGCCA 1 cut(s) 445
Mph1103I ATGCAT 1 cut(s) 1039
MroXI GAANNNNTTC 1 cut(s) 2952
MscI TGGCCA 1 cut(s) 445
MslI CAYNNNNRTG 3 cut(s) 392, 2075, 2747
Msp20I TGGCCA 1 cut(s) 445
MspA1I CMGCKG 2 cut(s) 671, 953
MspI CCGG 3 cut(s) 2187, 2607, 2873
MspR9I CCNGG 2 cut(s) 1569, 2666
MunI CAATTG 1 cut(s) 651
Mva1269I GAATGC 2 cut(s) 1589, 2895
MvaI CCWGG 2 cut(s) 1569, 2666
MvnI CGCG 1 cut(s) 184
MwoI GCNNNNNNNGC 5 cut(s) 179, 233, 532, 950, 1721
NdeI CATATG 1 cut(s) 1251
NdeII GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
NlaIII CATG 9 cut(s) 25, 194, 1015, 1188, 1465, 2361, 2462, 2521, 2746
NlaIV GGNNCC 5 cut(s) 781, 1234, 1764, 1830, 2860
NmuCI GTSAC 8 cut(s) 502, 515, 955, 1114, 1154, 1277, 1628, 1897
NsiI ATGCAT 1 cut(s) 1039
NspI RCATGY 4 cut(s) 25, 1188, 1465, 2361
OliI CACNNNNGTG 1 cut(s) 2075
PaeI GCATGC 2 cut(s) 1465, 2361
PagI TCATGA 1 cut(s) 2742
PaqCI CACCTGC 1 cut(s) 886
PciSI GCTCTTC 1 cut(s) 1569
PctI GAATGC 2 cut(s) 1589, 2895
PdmI GAANNNNTTC 1 cut(s) 2952
PfeI GAWTC 2 cut(s) 574, 713
PflMI CCANNNNNTGG 2 cut(s) 674, 2486
PinAI ACCGGT 2 cut(s) 2606, 2872
PkrI GCNGC 3 cut(s) 76, 952, 2923
PleI GAGTC 2 cut(s) 1131, 2163
PpsI GAGTC 2 cut(s) 1131, 2163
PpuMI RGGWCCY 1 cut(s) 1762
PshBI ATTAAT 1 cut(s) 1805
PsiI TTATAA 1 cut(s) 1347
Psp5II RGGWCCY 1 cut(s) 1762
Psp6I CCWGG 2 cut(s) 1567, 2664
PspFI CCCAGC 1 cut(s) 1877
PspGI CCWGG 2 cut(s) 1567, 2664
PspN4I GGNNCC 5 cut(s) 781, 1234, 1764, 1830, 2860
PspPI GGNCC 4 cut(s) 1762, 1979, 2609, 2963
PspPPI RGGWCCY 1 cut(s) 1762
PsrI GAACNNNNNNTAC 2 cut(s) 178, 210
PstI CTGCAG 4 cut(s) 897, 1069, 1846, 2037
PstNI CAGNNNCTG 2 cut(s) 1334, 2120
PsuI RGATCY 1 cut(s) 1828
PvuII CAGCTG 2 cut(s) 671, 953
RsaI GTAC 3 cut(s) 983, 1429, 1890
RsaNI GTAC 3 cut(s) 982, 1428, 1889
RseI CAYNNNNRTG 3 cut(s) 392, 2075, 2747
SapI GCTCTTC 1 cut(s) 1569
SatI GCNGC 3 cut(s) 75, 951, 2922
Sau3AI GATC 7 cut(s) 1828, 2048, 2369, 2514, 2754, 2775, 2929
Sau96I GGNCC 4 cut(s) 1762, 1979, 2609, 2963
SchI GAGTC 2 cut(s) 1132, 2163
ScrFI CCNGG 2 cut(s) 1569, 2666
SduI GDGCHC 3 cut(s) 1202, 1306, 2801
SfcI CTRYAG 8 cut(s) 520, 893, 1065, 1446, 1842, 1971, 2033, 2445
SinI GGWCC 2 cut(s) 1762, 2609
SmiMI CAYNNNNRTG 3 cut(s) 392, 2075, 2747
SmlI CTYRAG 1 cut(s) 2630
SmoI CTYRAG 1 cut(s) 2630
SphI GCATGC 2 cut(s) 1465, 2361
SsiI CCGC 1 cut(s) 2456
SspI AATATT 4 cut(s) 477, 2326, 2497, 2530
SspMI CTAG 5 cut(s) 233, 585, 812, 1206, 1770
StyD4I CCNGG 2 cut(s) 1567, 2664
StyI CCWWGG 2 cut(s) 26, 198
TaaI ACNGT 8 cut(s) 119, 1420, 1888, 2320, 2651, 2764, 2815, 2936
TaiI ACGT 1 cut(s) 2593
TaqI TCGA 3 cut(s) 90, 1518, 1585
TaqII GACCGA 1 cut(s) 2525
TfiI GAWTC 2 cut(s) 574, 713
TseFI GTSAC 8 cut(s) 502, 515, 955, 1114, 1154, 1277, 1628, 1897
TseI GCWGC 3 cut(s) 74, 950, 2921
Tsp45I GTSAC 8 cut(s) 502, 515, 955, 1114, 1154, 1277, 1628, 1897
TspDTI ATGAA 9 cut(s) 76, 632, 726, 1043, 1154, 2486, 2494, 2629, 2731
TspGWI ACGGA 2 cut(s) 1906, 2948
Van91I CCANNNNNTGG 2 cut(s) 674, 2486
VpaK11BI GGWCC 2 cut(s) 1762, 2609
VspI ATTAAT 1 cut(s) 1805
XagI CCTNNNNNAGG 1 cut(s) 336
XapI RAATTY 3 cut(s) 1454, 2501, 2789
XceI RCATGY 4 cut(s) 25, 1188, 1465, 2361
XmnI GAANNNNTTC 1 cut(s) 2952
XspI CTAG 5 cut(s) 233, 585, 812, 1206, 1770
Zsp2I ATGCAT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.