Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008882

Physical Location & Seq

Genomic Coordinates Forward (+)

48889274 .. 48893191

Gene Structure 3918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0374900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGAGCCTGTGGCGATTACGTCGCAGAAACATGACCCGGCTTGGAAACATTGCCAAATGTTTAAGAGTGGGGATAGAATTCAGCTCAAGTGTATATATTGTAGCAAGTTGTTTAGGGGTGGAGGGATTCATAGGATTAAGGAACACCTTGCAGGCCAGAAGGGCAATGCTTCCACTTGTTTGAGGGTTCCGCCGGATGTTCGGGCTCTAATGCAGCAGAGTTTAGATGGGGTTGTGGTTAAGAAGAGGAATAGGCAGAAGCTTGATGAGGAGATTACTAACATTACTCCCCCACCGGATGGTGAGGTGGACTCACTTGGTGGGATTCAGAGTGATGTGAATAATGCGCTTGAGTTGACTGGAGTTCCACTTGAGACTAGTTCGAGGTTGTTGGTGAATCAAGAGGGGATAATGAGTGTTAGGAGGAAGAGGGGGAGAGGGAAAAGCTCTTCATCGTCCCATGGTGCTCATGGTGTCTGTAATAGTGGTGCATTGGTTTCTAGAAAAGTGAACAGTTATGTTCACGAGGCAATTGGGAGATTTTTGTTTGATATTGGGGCACCTCTGGAGGCAGGGAACTCAGCTTATTTCCAACCGATGATTGATGCAATTGCTTCGGGAGGTCAAGGGGTTGAGCCTCCCACGTATCATGATCTTCGGAGTTGGATATTGAAGAATTCGGTTGAGGAAGCGAGGAATAATATTGATAAACATAGGGCAACGTGGGGAAGGACTGGTTGCTCTATTTTGGTTGATCAGTGGAACACCGAGTTAGATAATGTTATGCTAAGTTTTCTGGTGTCCTGTCCCGAAGGAACTGTGTTTTTGGAATCTGTGGATGCATCAGCGATTATAAATTCCTCAGATGCTCTTTACGATTTGCTTAGGAGAGTGGTAGAATATGTTGGAGTAGGAGATGTAGTTCAAGTGATTACTAGTGGTGAAGAGCAATTTATAGTTGCAGGGAGAAGGTTGACTGATACATTCCCTACTCTGTATTGGATTCCATGTGCAGCTCGTTGTCTGGACTTGATGCTTGAGGATTTTTGTAGCATTGAGTGGATACATGCAGTAATTGAGCAAGCTAGATCCATCACAAAGTTTGTGTACAATCACAATGTAGTCTTAAATATGGTTAGAAGGTCCACTTTTGGCAATGATATAGTAGAACCAGGAGTCACTCGCTCTGGTACAAACTTTACAACATTGAAACGACTGGCTGAGCTGAAACACTGTTTACAGGTCATGGTGACTTCGCAAGAGTGGATGGATTGCCCATATTCAAAGGAACCAGGGGGATTGGAGATGTCAGATCTTATAAGTGACAGGGATCAATCATTTTGGTCCTCATGCACCCTGGTTGTTCGTCTGACAAGTCCTCTCTTGCGAGTTTTGGGAATGGTTGGTTGTGAGAAGAGGCCTGCAATGGGTTTTATTTATGCTGGAATGTATCGGGCAAAAGAAGCAATTAAGAAAGAACTTGTCAAGAGAGAGGAGTACATGGTGTACTGGAATATTATAGATCATCGATGGGAACAGCATTGGAATTTTCCTCTTCATACTGCAGGGTTCTACCTTAACCCTAAAATATTTTATAGCATTGAAGGAGATATCCATAATAGTATCCAGTCAGGAATGTATGATTGCATAGAGAGATTGGTTCCCGATATAAAAGTCCAAGATAAAATCATGAAAGAGATAATTTCGTACAAGAATGCTGCCGGGGATTTTCGGAGGAAGATGGCCATTCGGGCAAGAGACACTCTGCTTCCTGCTGAATGGTGGTCAACATACGGTGGAGGTTGCCCAAATCTAGCTCGCTTGGCAATTCGCGTTCTCAGTCAAACTTGTGGTTCAATTGGGTATAGGCAAAGTCAGATTCCTTTTGAGAAAGCACACGGCATAAGGAACTGCCTAGAGCGCCAACGTCTCAGGGACCTTGTCTTTGTTCAGTACAACCTACGACTGAGACAAATGGTTGATAAAAACATTGGAGAAGATTGTATGGATCCTATATCATTTGAAAGCATTAGCATTGTTGAAGACTGGGTTACAGGGAAAGACGTGTGCTCGGAAGACCTTGAGAGTTCAAGTTGGATGGCACTTGACTCACCCTCTGCTAGCACGATGCTTTTAGGACACTCAAATGATGATGCCGAGGATTTGGGCTCTGGGTTTTATGATGGTGAGATTTTCAGTAGGGGGAAAGACGGGGAAAATGAAATTGTTGAAGACAATGTAGAAAATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006109 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010565 GO:0019222 GO:0030656 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0043255 GO:0045912 GO:0046137 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051193 GO:0051195 GO:0051196 GO:0051198 GO:0062012 GO:0062014 GO:0065007 GO:0080090 GO:2000082 GO:2000083

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

750

Amino Acids

84.32

Weight (kDa)

5.88

Isoelectric Point (pI)

50.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF659	PF04937	214 - 365	9.4e-55	Domain of unknown function (DUF659)
Dimer_Tnp_hAT	PF05699	581 - 654	5.9e-06	hAT family C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008882)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360
malus_domestica	MD01G1172700.v1.1 MD07G1239000.v1.1
prunus_persica	Prupe.2G267800_v2.0.a1 Prupe.2G267800_v2.0.a1
pyrus_communis	pycom01g18430 pycom01g18450 pycom07g21500
rosa_chinensis	RchiOBHm_Chr1g0372921
rosa_laevigata	RLG00000026866
rosa_multiflora	Rmu_ssc0000425.1_g000017
rosa_roxburghii	Rroxscaffold_4G00284610
rosa_rugosa	Rorug01G0374900
rosa_samantha	Rh1AG383400 Rh1BG347300 Rh1CG360700 Rh1DG378200
rosa_wichuraiana	Rw1G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	854, 1319
AccB1I	GGYRCC	1 cut(s)	559
AccB7I	CCANNNNNTGG	1 cut(s)	299
AccII	CGCG	1 cut(s)	1833
AciI	CCGC	1 cut(s)	191
AclWI	GGATC	4 cut(s)	1083, 1338, 2003, 2016
AcoI	YGGCCR	1 cut(s)	1743
AcsI	RAATTY	4 cut(s)	78, 676, 856, 1546
AdeI	CACNNNGTG	1 cut(s)	320
AfaI	GTAC	6 cut(s)	1109, 1192, 1499, 1508, 1709, 1955
AfiI	CCNNNNNNNGG	2 cut(s)	299, 1427
AflIII	ACRYGT	1 cut(s)	2064
AhlI	ACTAGT	2 cut(s)	377, 935
AjiI	CACGTC	1 cut(s)	2065
AjnI	CCWGG	3 cut(s)	1171, 1291, 1356
AloI	GAACNNNNNNTCC	2 cut(s)	906, 938
AluBI	AGCT	8 cut(s)	85, 262, 447, 584, 1016, 1085, 1225, 1817
AluI	AGCT	8 cut(s)	85, 262, 447, 584, 1016, 1085, 1225, 1817
Alw21I	GWGCWC	2 cut(s)	469, 2072
Alw26I	GTCTC	4 cut(s)	368, 1752, 1934, 1963
AlwI	GGATC	4 cut(s)	1083, 1338, 2003, 2016
AoxI	GGCC	3 cut(s)	154, 1418, 1743
ApeKI	GCWGC	3 cut(s)	214, 1013, 1718
ApoI	RAATTY	4 cut(s)	78, 676, 856, 1546
ArsI	GACNNNNNNTTYG	2 cut(s)	1928, 1960
AspLEI	GCGC	2 cut(s)	349, 1923
AspS9I	GGNCC	3 cut(s)	1143, 1344, 1936
AsuC2I	CCSGG	2 cut(s)	38, 1723
AsuHPI	GGTGA	6 cut(s)	314, 406, 953, 1261, 2103, 2198
AsuNHI	GCTAGC	1 cut(s)	2120
AvaII	GGWCC	3 cut(s)	1143, 1344, 1936
BaeGI	GKGCMC	1 cut(s)	562
BalI	TGGCCA	1 cut(s)	1745
BamHI	GGATCC	1 cut(s)	2008
BanI	GGYRCC	1 cut(s)	559
BanII	GRGCYC	2 cut(s)	208, 2171
BauI	CACGAG	1 cut(s)	524
BbsI	GAAGAC	3 cut(s)	2049, 2082, 2238
Bbv12I	GWGCWC	2 cut(s)	469, 2072
BbvI	GCAGC	3 cut(s)	226, 1025, 1705
BccI	CCATC	8 cut(s)	221, 293, 1100, 1261, 1524, 1735, 2092, 2177
BceAI	ACGGC	1 cut(s)	1915
BcgI	CGANNNNNNTGC	2 cut(s)	597, 631
BciT130I	CCWGG	3 cut(s)	1173, 1293, 1358
BciVI	GTATCC	2 cut(s)	1056, 1634
BclI	TGATCA	1 cut(s)	754
BcnI	CCSGG	2 cut(s)	38, 1723
BcoDI	GTCTC	4 cut(s)	368, 1752, 1934, 1963
BcuI	ACTAGT	2 cut(s)	377, 935
BfaI	CTAG	7 cut(s)	378, 501, 936, 1086, 1814, 1916, 2121
BfmI	CTRYAG	1 cut(s)	1563
BfoI	RGCGCY	1 cut(s)	1924
BfuI	GTATCC	2 cut(s)	1056, 1634
BglI	GCCNNNNNGGC	2 cut(s)	162, 1751
BglII	AGATCT	1 cut(s)	1312
BisI	GCNGC	3 cut(s)	215, 1014, 1719
BlpI	GCTNAGC	1 cut(s)	1221
BlsI	GCNGC	3 cut(s)	216, 1015, 1720
Bme1390I	CCNGG	5 cut(s)	38, 1173, 1293, 1358, 1723
Bme18I	GGWCC	3 cut(s)	1143, 1344, 1936
BmgBI	CACGTC	1 cut(s)	2065
BmgT120I	GGNCC	3 cut(s)	1143, 1344, 1936
BmiI	GGNNCC	7 cut(s)	6, 189, 561, 1290, 1662, 1937, 2010
BmrFI	CCNGG	5 cut(s)	38, 1173, 1293, 1358, 1723
BmrI	ACTGGG	1 cut(s)	2056
BmsI	GCATC	7 cut(s)	595, 829, 851, 856, 1023, 2118, 2143
BmtI	GCTAGC	1 cut(s)	2124
BmuI	ACTGGG	1 cut(s)	2056
BpiI	GAAGAC	3 cut(s)	2049, 2082, 2238
BplI	GAGNNNNNCTC	2 cut(s)	296, 328
BpmI	CTGGAG	2 cut(s)	381, 587
Bpu10I	CCTNAGC	1 cut(s)	884
Bpu1102I	GCTNAGC	1 cut(s)	1221
BpuEI	CTTGAG	5 cut(s)	71, 371, 392, 1058, 2102
BpuMI	CCSGG	2 cut(s)	38, 1723
Bsa29I	ATCGAT	1 cut(s)	1528
BsaAI	YACGTR	1 cut(s)	645
BsaJI	CCNNGG	5 cut(s)	460, 1292, 1356, 1722, 2157
BsaWI	WCCGGW	1 cut(s)	295
BsaXI	ACNNNNNCTCC	2 cut(s)	906, 936
Bsc4I	CCNNNNNNNGG	2 cut(s)	299, 1427
Bse1I	ACTGG	6 cut(s)	364, 739, 1221, 1514, 1627, 2051
Bse3DI	GCAATG	4 cut(s)	49, 172, 1162, 1431
BseBI	CCWGG	3 cut(s)	1173, 1293, 1358
BseCI	ATCGAT	1 cut(s)	1528
BseDI	CCNNGG	5 cut(s)	460, 1292, 1356, 1722, 2157
BseGI	GGATG	5 cut(s)	202, 304, 844, 1272, 2103
BseLI	CCNNNNNNNGG	2 cut(s)	299, 1427
BseMI	GCAATG	4 cut(s)	49, 172, 1162, 1431
BseMII	CTCAG	6 cut(s)	594, 876, 1212, 1852, 1945, 1958
BseNI	ACTGG	6 cut(s)	364, 739, 1221, 1514, 1627, 2051
BseRI	GAGGAG	2 cut(s)	284, 1508
BseSI	GKGCMC	1 cut(s)	562
BseXI	GCAGC	3 cut(s)	226, 1025, 1705
BsgI	GTGCAG	1 cut(s)	1032
Bsh1236I	CGCG	1 cut(s)	1833
BshFI	GGCC	3 cut(s)	156, 1420, 1745
BshNI	GGYRCC	1 cut(s)	559
BshVI	ATCGAT	1 cut(s)	1528
BsiHKAI	GWGCWC	2 cut(s)	469, 2072
BsiSI	CCGG	4 cut(s)	38, 194, 296, 1722
BslFI	GGGAC	3 cut(s)	442, 792, 1949
BslI	CCNNNNNNNGG	2 cut(s)	299, 1427
BsmAI	GTCTC	4 cut(s)	368, 1752, 1934, 1963
BsmBI	CGTCTC	1 cut(s)	1934
BsmFI	GGGAC	3 cut(s)	442, 792, 1949
BsmI	GAATGC	1 cut(s)	1720
BsnI	GGCC	3 cut(s)	156, 1420, 1745
Bsp1286I	GDGCHC	5 cut(s)	208, 469, 562, 2072, 2171
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
Bsp1720I	GCTNAGC	1 cut(s)	1221
Bsp19I	CCATGG	1 cut(s)	460
BspACI	CCGC	1 cut(s)	191
BspANI	GGCC	3 cut(s)	156, 1420, 1745
BspCNI	CTCAG	6 cut(s)	593, 875, 1213, 1851, 1944, 1959
BspDI	ATCGAT	1 cut(s)	1528
BspFNI	CGCG	1 cut(s)	1833
BspHI	TCATGA	2 cut(s)	649, 1689
BspLI	GGNNCC	7 cut(s)	6, 189, 561, 1290, 1662, 1937, 2010
BspMAI	CTGCAG	1 cut(s)	1567
BspOI	GCTAGC	1 cut(s)	2124
BspPI	GGATC	4 cut(s)	1083, 1338, 2003, 2016
BspQI	GCTCTTC	2 cut(s)	454, 939
BspT107I	GGYRCC	1 cut(s)	559
BsrDI	GCAATG	4 cut(s)	49, 172, 1162, 1431
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	6 cut(s)	364, 739, 1221, 1514, 1627, 2051
BssECI	CCNNGG	5 cut(s)	460, 1292, 1356, 1722, 2157
BssMI	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
BssSI	CACGAG	1 cut(s)	524
BssT1I	CCWWGG	1 cut(s)	460
Bst2BI	CACGAG	1 cut(s)	524
Bst2UI	CCWGG	3 cut(s)	1173, 1293, 1358
Bst4CI	ACNGT	4 cut(s)	515, 820, 1235, 1796
Bst6I	CTCTTC	6 cut(s)	239, 422, 454, 939, 1409, 1560
BstAUI	TGTACA	1 cut(s)	1107
BstBAI	YACGTR	1 cut(s)	645
BstC8I	GCNNGC	5 cut(s)	154, 1083, 1422, 1819, 2122
BstDEI	CTNAG	8 cut(s)	580, 788, 862, 884, 1221, 1838, 1931, 1967
BstDSI	CCRYGG	1 cut(s)	460
BstF5I	GGATG	5 cut(s)	202, 304, 844, 1272, 2103
BstFNI	CGCG	1 cut(s)	1833
BstH2I	RGCGCY	1 cut(s)	1924
BstHHI	GCGC	2 cut(s)	349, 1923
BstKTI	GATC	7 cut(s)	655, 757, 1091, 1315, 1333, 1525, 2011
BstMAI	GTCTC	4 cut(s)	368, 1752, 1934, 1963
BstMBI	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
BstMWI	GCNNNNNNNGC	5 cut(s)	162, 1463, 1751, 1823, 1920
BstNI	CCWGG	3 cut(s)	1173, 1293, 1358
BstNSI	RCATGY	1 cut(s)	1070
BstSCI	CCNGG	5 cut(s)	36, 1171, 1291, 1356, 1721
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	1 cut(s)	562
BstUI	CGCG	1 cut(s)	1833
BstV1I	GCAGC	3 cut(s)	226, 1025, 1705
BstV2I	GAAGAC	3 cut(s)	2049, 2082, 2238
BstX2I	RGATCY	3 cut(s)	1088, 1312, 2008
BstYI	RGATCY	3 cut(s)	1088, 1312, 2008
Bsu15I	ATCGAT	1 cut(s)	1528
BsuI	GTATCC	2 cut(s)	1056, 1634
BsuRI	GGCC	3 cut(s)	156, 1420, 1745
BsuTUI	ATCGAT	1 cut(s)	1528
BtgI	CCRYGG	1 cut(s)	460
BtrI	CACGTC	1 cut(s)	2065
BtsCI	GGATG	5 cut(s)	202, 304, 844, 1272, 2103
BtsIMutI	CAGTG	2 cut(s)	764, 1231
Cac8I	GCNNGC	5 cut(s)	154, 1083, 1422, 1819, 2122
CciI	TCATGA	2 cut(s)	649, 1689
CfoI	GCGC	2 cut(s)	349, 1923
Cfr13I	GGNCC	3 cut(s)	1143, 1344, 1936
ClaI	ATCGAT	1 cut(s)	1528
Csp6I	GTAC	6 cut(s)	1108, 1191, 1498, 1507, 1708, 1954
CviQI	GTAC	6 cut(s)	1108, 1191, 1498, 1507, 1708, 1954
DdeI	CTNAG	8 cut(s)	580, 788, 862, 884, 1221, 1838, 1931, 1967
DpnI	GATC	7 cut(s)	654, 756, 1090, 1314, 1332, 1524, 2010
DpnII	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
DraIII	CACNNNGTG	1 cut(s)	320
EaeI	YGGCCR	1 cut(s)	1743
Eam1104I	CTCTTC	6 cut(s)	239, 422, 454, 939, 1409, 1560
EarI	CTCTTC	6 cut(s)	239, 422, 454, 939, 1409, 1560
EciI	GGCGGA	1 cut(s)	180
Eco130I	CCWWGG	1 cut(s)	460
Eco147I	AGGCCT	1 cut(s)	1420
Eco24I	GRGCYC	2 cut(s)	208, 2171
Eco32I	GATATC	1 cut(s)	1612
Eco47I	GGWCC	3 cut(s)	1143, 1344, 1936
EcoO109I	RGGNCCY	1 cut(s)	1936
EcoRI	GAATTC	2 cut(s)	78, 676
EcoRII	CCWGG	3 cut(s)	1171, 1291, 1356
EcoRV	GATATC	1 cut(s)	1612
EcoT14I	CCWWGG	1 cut(s)	460
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	2 cut(s)	208, 2171
ErhI	CCWWGG	1 cut(s)	460
Esp3I	CGTCTC	1 cut(s)	1934
FalI	AAGNNNNNCTT	2 cut(s)	1132, 1164
FaqI	GGGAC	3 cut(s)	442, 792, 1949
FbaI	TGATCA	1 cut(s)	754
Fnu4HI	GCNGC	3 cut(s)	215, 1014, 1719
FokI	GGATG	5 cut(s)	209, 311, 851, 1279, 2110
FriOI	GRGCYC	2 cut(s)	208, 2171
Fsp4HI	GCNGC	3 cut(s)	215, 1014, 1719
FspBI	CTAG	7 cut(s)	378, 501, 936, 1086, 1814, 1916, 2121
GlaI	GCGC	2 cut(s)	348, 1922
GluI	GCNGC	3 cut(s)	215, 1014, 1719
GsuI	CTGGAG	2 cut(s)	381, 587
HaeII	RGCGCY	1 cut(s)	1924
HaeIII	GGCC	3 cut(s)	156, 1420, 1745
HapII	CCGG	4 cut(s)	38, 194, 296, 1722
HhaI	GCGC	2 cut(s)	349, 1923
Hin6I	GCGC	2 cut(s)	347, 1921
HinP1I	GCGC	2 cut(s)	347, 1921
HincII	GTYRAC	3 cut(s)	357, 975, 1788
HindII	GTYRAC	3 cut(s)	357, 975, 1788
HindIII	AAGCTT	1 cut(s)	260
HinfI	GANTC	9 cut(s)	127, 311, 325, 397, 830, 1003, 1176, 1879, 2108
HpaII	CCGG	4 cut(s)	38, 194, 296, 1722
HphI	GGTGA	6 cut(s)	314, 406, 953, 1261, 2103, 2198
Hpy188I	TCNGA	8 cut(s)	330, 660, 865, 1312, 1371, 1734, 1878, 2074
Hpy99I	CGWCG	1 cut(s)	25
HpyAV	CCTTC	6 cut(s)	154, 723, 806, 963, 1134, 1598
HpyCH4III	ACNGT	4 cut(s)	515, 820, 1235, 1796
HpyCH4IV	ACGT	5 cut(s)	20, 644, 722, 1927, 2064
HpyF10VI	GCNNNNNNNGC	5 cut(s)	162, 1463, 1751, 1823, 1920
HpyF3I	CTNAG	8 cut(s)	580, 788, 862, 884, 1221, 1838, 1931, 1967
HpySE526I	ACGT	5 cut(s)	20, 644, 722, 1927, 2064
HspAI	GCGC	2 cut(s)	347, 1921
Ksp22I	TGATCA	1 cut(s)	754
Kzo9I	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
LguI	GCTCTTC	2 cut(s)	454, 939
LmnI	GCTCC	1 cut(s)	4
Lsp1109I	GCAGC	3 cut(s)	226, 1025, 1705
LweI	GCATC	7 cut(s)	595, 829, 851, 856, 1023, 2118, 2143
MaeI	CTAG	7 cut(s)	378, 501, 936, 1086, 1814, 1916, 2121
MaeII	ACGT	5 cut(s)	20, 644, 722, 1927, 2064
MaeIII	GTNAC	4 cut(s)	1177, 1249, 1322, 2050
MalI	GATC	7 cut(s)	654, 756, 1090, 1314, 1332, 1524, 2010
MboI	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
MfeI	CAATTG	3 cut(s)	531, 609, 1857
MflI	RGATCY	3 cut(s)	1088, 1312, 2008
MhlI	GDGCHC	5 cut(s)	208, 469, 562, 2072, 2171
MlsI	TGGCCA	1 cut(s)	1745
MluNI	TGGCCA	1 cut(s)	1745
MlyI	GAGTC	3 cut(s)	305, 1185, 2102
MmeI	TCCRAC	4 cut(s)	616, 644, 886, 2075
Mox20I	TGGCCA	1 cut(s)	1745
Mph1103I	ATGCAT	1 cut(s)	844
MscI	TGGCCA	1 cut(s)	1745
MseI	TTAA	6 cut(s)	63, 138, 240, 1127, 1470, 1578
MslI	CAYNNNNRTG	1 cut(s)	2145
Msp20I	TGGCCA	1 cut(s)	1745
MspI	CCGG	4 cut(s)	38, 194, 296, 1722
MspR9I	CCNGG	5 cut(s)	38, 1173, 1293, 1358, 1723
MunI	CAATTG	3 cut(s)	531, 609, 1857
Mva1269I	GAATGC	1 cut(s)	1720
MvaI	CCWGG	3 cut(s)	1173, 1293, 1358
MvnI	CGCG	1 cut(s)	1833
MwoI	GCNNNNNNNGC	5 cut(s)	162, 1463, 1751, 1823, 1920
NciI	CCSGG	2 cut(s)	38, 1723
NcoI	CCATGG	1 cut(s)	460
NdeII	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
NheI	GCTAGC	1 cut(s)	2120
NlaIV	GGNNCC	7 cut(s)	6, 189, 561, 1290, 1662, 1937, 2010
NmeAIII	GCCGAG	1 cut(s)	2182
NmuCI	GTSAC	3 cut(s)	1177, 1249, 1322
NsiI	ATGCAT	1 cut(s)	844
NspI	RCATGY	1 cut(s)	1070
PagI	TCATGA	2 cut(s)	649, 1689
PceI	AGGCCT	1 cut(s)	1420
PciSI	GCTCTTC	2 cut(s)	454, 939
PctI	GAATGC	1 cut(s)	1720
PfeI	GAWTC	6 cut(s)	127, 325, 397, 830, 1003, 1879
PflFI	GACNNNGTC	1 cut(s)	1940
PflMI	CCANNNNNTGG	1 cut(s)	299
PkrI	GCNGC	3 cut(s)	216, 1015, 1720
PleI	GAGTC	3 cut(s)	305, 1184, 2102
PpsI	GAGTC	3 cut(s)	305, 1184, 2102
Ppu21I	YACGTR	1 cut(s)	645
PpuMI	RGGWCCY	1 cut(s)	1936
PsiI	TTATAA	2 cut(s)	854, 1319
Psp5II	RGGWCCY	1 cut(s)	1936
Psp6I	CCWGG	3 cut(s)	1171, 1291, 1356
PspGI	CCWGG	3 cut(s)	1171, 1291, 1356
PspN4I	GGNNCC	7 cut(s)	6, 189, 561, 1290, 1662, 1937, 2010
PspPI	GGNCC	3 cut(s)	1143, 1344, 1936
PspPPI	RGGWCCY	1 cut(s)	1936
PstI	CTGCAG	1 cut(s)	1567
PsuI	RGATCY	3 cut(s)	1088, 1312, 2008
PsyI	GACNNNGTC	1 cut(s)	1940
RsaI	GTAC	6 cut(s)	1109, 1192, 1499, 1508, 1709, 1955
RsaNI	GTAC	6 cut(s)	1108, 1191, 1498, 1507, 1708, 1954
RseI	CAYNNNNRTG	1 cut(s)	2145
SapI	GCTCTTC	2 cut(s)	454, 939
SaqAI	TTAA	6 cut(s)	63, 138, 240, 1127, 1470, 1578
SatI	GCNGC	3 cut(s)	215, 1014, 1719
Sau3AI	GATC	7 cut(s)	652, 754, 1088, 1312, 1330, 1522, 2008
Sau96I	GGNCC	3 cut(s)	1143, 1344, 1936
SchI	GAGTC	3 cut(s)	305, 1185, 2102
ScrFI	CCNGG	5 cut(s)	38, 1173, 1293, 1358, 1723
SduI	GDGCHC	5 cut(s)	208, 469, 562, 2072, 2171
SfaNI	GCATC	7 cut(s)	595, 829, 851, 856, 1023, 2118, 2143
SfcI	CTRYAG	1 cut(s)	1563
SinI	GGWCC	3 cut(s)	1143, 1344, 1936
SmiMI	CAYNNNNRTG	1 cut(s)	2145
SmlI	CTYRAG	5 cut(s)	86, 350, 371, 1037, 2081
SmoI	CTYRAG	5 cut(s)	86, 350, 371, 1037, 2081
SpeI	ACTAGT	2 cut(s)	377, 935
SseBI	AGGCCT	1 cut(s)	1420
SsiI	CCGC	1 cut(s)	191
SspI	AATATT	3 cut(s)	703, 1516, 1590
SspMI	CTAG	7 cut(s)	378, 501, 936, 1086, 1814, 1916, 2121
StuI	AGGCCT	1 cut(s)	1420
StyD4I	CCNGG	5 cut(s)	36, 1171, 1291, 1356, 1721
StyI	CCWWGG	1 cut(s)	460
TaaI	ACNGT	4 cut(s)	515, 820, 1235, 1796
TaiI	ACGT	5 cut(s)	23, 647, 725, 1930, 2067
TaqI	TCGA	2 cut(s)	383, 1528
TatI	WGTACW	4 cut(s)	1107, 1497, 1506, 1953
TfiI	GAWTC	6 cut(s)	127, 325, 397, 830, 1003, 1879
Tru1I	TTAA	6 cut(s)	63, 138, 240, 1127, 1470, 1578
Tru9I	TTAA	6 cut(s)	63, 138, 240, 1127, 1470, 1578
TscAI	CASTG	2 cut(s)	764, 1238
TseFI	GTSAC	3 cut(s)	1177, 1249, 1322
TseI	GCWGC	3 cut(s)	214, 1013, 1718
Tsp45I	GTSAC	3 cut(s)	1177, 1249, 1322
TspDTI	ATGAA	5 cut(s)	119, 441, 1547, 1706, 2235
TspRI	CASTG	2 cut(s)	764, 1238
Tth111I	GACNNNGTC	1 cut(s)	1940
Van91I	CCANNNNNTGG	1 cut(s)	299
VpaK11BI	GGWCC	3 cut(s)	1143, 1344, 1936
XapI	RAATTY	4 cut(s)	78, 676, 856, 1546
XbaI	TCTAGA	1 cut(s)	500
XceI	RCATGY	1 cut(s)	1070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	467
XspI	CTAG	7 cut(s)	378, 501, 936, 1086, 1814, 1916, 2121
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.