Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0008882

Physical Location & Seq

Genomic Coordinates Forward (+)

60054261 .. 60060549

Gene Structure 6289 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG378200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGTCAAAACCAATGCAAAGTGCTAAACCAGTAGAATTTACTGTTTCGCCTGCAAAAGTTGCCCAGGTTGAGAGACAGAGTTCAACTGAAAGTGGGGAGTCTTCTGAATCAAGTGATGAGGACCAAAGATCTGCAGAAAGAAGTCGAAGTCTTATGAGAAATGCGGCACCTAGAAGGTCGGCATCTCCAATGCGGAGGGTTCAGATAGGTAGAACTGGGTCGCGCAGGGCTGCTGCATTAACTATTAAGAGCCTCAACTATTATCCATCTAGGGAAAAGCCATTTTCTAATGAAGATGGTGAATCCGAACACTCGAATAAGAAACCTGAGTTTAATGTCCAAAGGATCAGTGTTCAAGACGCAATTAGTCTTTTCGAAAGCAAGCAGAAGGATCAAGCTACAGATACTCAAAAAAGGAGCTCATTAACAAATATATCTGCGGTTCCAAATAAAGCTGTATTGAGAAGATGGAGTTCAAGTGTGGGGGTAGCTTCGACCCAATGCCAATCAGAAATCGTCTCTGAAGACTGTGTTCCTGTGACTCCCAATGGTATGTCTAATGTTGAGACTCCAAAATGTTCAGAGGAAGTGAAGTCAGATTCTGACCCTTTACCTACAGGTCAGAACACTATTGAGACTCCAAAGGTTGATGTCAACCAAGAAAAATTAGAGAAAAAATCAGCGCCACTTGATATTCATGTGGACAGTAGCATAACTCAGGAAGTTATTAGAAAATCAACAGCATCGAGTGACTGGAATCAAGAGAGGGAAGCTGAACTGAACCAGATGCTGAAGAAAATGATGGAAAGCAAGCCTGTTAAATCTACAAAGTCACAAGCTAGCAGGAACCCAAGCATTCCCGCTGAGAATAGAGGTGGGTTTTATGACCACTACAAGGAGAAGAGAGATGAGAAACTACGAGGAGAGAATTCTAGAAAGCGAGCAGAAAAGGAAGCACAAATTAAAGCCATGCAGCGGATTCTTGATGAAAGGAAAGCAGAAATGGCCTCTGCAAATGTGAATGATAGTGATAAAAAACGTGTGCAGAAGCCCCAAAAGTCGCTTGGAAAATTATCTCAGCCAGCAAATCCCAAGAAGGAAACTTTAAAACCTTCTGTTCCAAAGAAGGTTTCACCTAGAACATCACCCTTGCCTGCTACACGCAAGTCGTGGCCATCAACACCAACACCAAGAGCCACAGGAGTATCACCAGCTAAAACTCCTGTTAGTGCCTCTTCTGCCAGCACTACTCCAACTCGTCAAAAACCCAAGCCTACACCACCCACAGCTAAAGTGGAAAGGCCCCAACAGCGAAAGAGAAATGTGAAGGAATCTGTGATCAATAATGATAGGAGCTTGAAGGGAGTGACTGAGAAGCAGCAGCAAGCAGTCAAAAAGAACGGAAAATCAACAAAACCAACAGTAGTGACAACTTCTGGTGATTTTTCTGGTATAATTCCAGCGAAGGCCAACAAGTCGACCAAGAAGAGCAGTGTAGTCCCTCTGGAATCAAAACCTTTTCTTCGCAAGGGTTCTAGAGCTAGTTCTGGTGCTGGTCCTGTCGTTAACAAGACCAGAAATTCTTCTCAATCAGATGAATCTTTGAGAACCAGCAAAAACATGGTTGAAACTCAAGAAGCTGAGGTGGTTGGTAGTGCTTCTGACCTTGTGAGTCAGCATCAAGGGCCTGATCTTATGTCGGTGGGTTTTCCTGATGATGTTGTAGAATCAAAAGCTCCAATAAATGATAATCTGACGTGTGATGAGACACAGGAGGGTGACCCAGTTTCTGCTGATAGTAATGATATGAAAGATGTTGCAGAGTCACCAACGAAAATTCAAGTTGAAGAAGAATCAATCATCTCCCCAAGTGCTTGGGTGGAAATAGAGGAGCATCAGGCCATGTCCCCATATAACAACAGCAAGTCTCAGCTTACCACTTCAGCCAATGTTGCACCATCTGGACTGTCAAGTCCTCGTGTCCGTCATTCTTTGTCCCAGATGCTGCAAGAAGAAAGCAATGAACCAGATAATATTGAGTGGGGGAATGCAGAAAACCCTCCGGCTATAATATTCCAAAAAGATGCACCAAAAGGACTGAAGAGGCTCCTAAAGTTTGCTCGGAAGAGCAAGGGAGATGCAAACAGTACCGGTTGGTCTAGCCCATCAGTCTTCTCGGAAGGAGAGGATGATGACACTGTACTCAGAAAGGCTTCCCTTCATGCAAAGAACTATGGGCAGCAAAAGACAGCCTTATATGAAGGTTATGATGCTCGTGAACTATACTCTGCTCAATCAAATATCAGCAAATTTGAGGCACAGAGTTCTTCTCATAAGTACCAAGAGGGCCGCGACACAGCTGCAGCACCAACAACTAAAGCAACAAGGTCATTCTTCTCTCTTTCAGCATTTAGGGGAAGCAAACCAAATGAGATGAAGTTTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

815

Amino Acids

89.47

Weight (kDa)

9.49

Isoelectric Point (pI)

59.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008882)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360 FvH4_7g26360
malus_domestica	MD01G1172700.v1.1 MD07G1239000.v1.1
prunus_persica	Prupe.2G267800_v2.0.a1 Prupe.2G267800_v2.0.a1
pyrus_communis	pycom01g18430 pycom01g18450 pycom07g21500
rosa_chinensis	RchiOBHm_Chr1g0372921
rosa_laevigata	RLG00000026866
rosa_multiflora	Rmu_ssc0000425.1_g000017
rosa_roxburghii	Rroxscaffold_4G00284610
rosa_rugosa	Rorug01G0374900
rosa_samantha	Rh1AG383400 Rh1BG347300 Rh1CG360700 Rh1DG378200
rosa_wichuraiana	Rw1G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1971
AccB1I	GGYRCC	1 cut(s)	166
AccI	GTMKAC	1 cut(s)	1478
AccII	CGCG	2 cut(s)	223, 2352
AciI	CCGC	6 cut(s)	164, 193, 440, 861, 976, 2350
AclWI	GGATC	2 cut(s)	353, 399
AcoI	YGGCCR	1 cut(s)	1172
AcsI	RAATTY	5 cut(s)	35, 928, 1579, 1836, 2309
AcuI	CTGAAG	4 cut(s)	543, 812, 1926, 2120
AfaI	GTAC	3 cut(s)	2149, 2202, 2339
AfiI	CCNNNNNNNGG	2 cut(s)	895, 975
AflIII	ACRYGT	2 cut(s)	1039, 1757
AgeI	ACCGGT	1 cut(s)	2150
AgsI	TTSAA	7 cut(s)	84, 356, 477, 1360, 1628, 1841, 1847
AjiI	CACGTC	1 cut(s)	1758
AjnI	CCWGG	1 cut(s)	63
AjuI	GAANNNNNNNTTGG	2 cut(s)	1114, 1146
Alw21I	GWGCWC	1 cut(s)	422
Alw26I	GTCTC	6 cut(s)	67, 523, 560, 629, 1760, 1932
AlwI	GGATC	2 cut(s)	353, 399
AlwNI	CAGNNNCTG	4 cut(s)	602, 790, 1790, 2005
AoxI	GGCC	7 cut(s)	1005, 1172, 1301, 1467, 1685, 1899, 2347
ApeKI	GCWGC	9 cut(s)	230, 233, 973, 1378, 1381, 2005, 2239, 2360, 2363
ApoI	RAATTY	5 cut(s)	35, 928, 1579, 1836, 2309
AsiGI	ACCGGT	1 cut(s)	2150
Asp700I	GAANNNNTTC	2 cut(s)	1582, 2212
AspLEI	GCGC	2 cut(s)	225, 685
AspS9I	GGNCC	5 cut(s)	121, 1302, 1556, 1685, 2347
AsuHPI	GGTGA	7 cut(s)	311, 1125, 1137, 1200, 1451, 1790, 1818
AsuII	TTCGAA	1 cut(s)	375
AsuNHI	GCTAGC	1 cut(s)	839
AvaII	GGWCC	2 cut(s)	121, 1556
BaeI	ACNNNNGTAYC	2 cut(s)	1188, 1221
BalI	TGGCCA	1 cut(s)	1174
BanI	GGYRCC	1 cut(s)	166
BanII	GRGCYC	1 cut(s)	422
BauI	CACGAG	2 cut(s)	1977, 2274
BbsI	GAAGAC	3 cut(s)	93, 531, 2164
Bbv12I	GWGCWC	1 cut(s)	422
BbvCI	CCTCAGC	1 cut(s)	1641
BbvI	GCAGC	9 cut(s)	217, 220, 985, 1390, 1393, 1992, 2251, 2347, 2375
BccI	CCATC	7 cut(s)	274, 290, 462, 796, 1183, 1966, 2173
BcgI	CGANNNNNNTGC	2 cut(s)	2342, 2376
BciT130I	CCWGG	1 cut(s)	65
BclI	TGATCA	1 cut(s)	1338
BcoDI	GTCTC	6 cut(s)	67, 523, 560, 629, 1760, 1932
BfaI	CTAG	8 cut(s)	171, 270, 840, 933, 1137, 1536, 1542, 2160
BfmI	CTRYAG	4 cut(s)	132, 399, 615, 2361
BfoI	RGCGCY	1 cut(s)	686
BglII	AGATCT	1 cut(s)	128
Bme1390I	CCNGG	1 cut(s)	65
Bme18I	GGWCC	2 cut(s)	121, 1556
BmgBI	CACGTC	1 cut(s)	1758
BmgT120I	GGNCC	5 cut(s)	121, 1302, 1556, 1685, 2347
BmiI	GGNNCC	5 cut(s)	168, 444, 848, 1304, 2108
BmrFI	CCNGG	1 cut(s)	65
BmrI	ACTGGG	2 cut(s)	225, 1778
BmsI	GCATC	9 cut(s)	191, 752, 777, 1687, 1903, 1992, 2074, 2128, 2260
BmtI	GCTAGC	1 cut(s)	843
BmuI	ACTGGG	2 cut(s)	225, 1778
BpiI	GAAGAC	3 cut(s)	93, 531, 2164
BplI	GAGNNNNNCTC	2 cut(s)	2314, 2346
Bpu10I	CCTNAGC	1 cut(s)	1641
Bpu14I	TTCGAA	1 cut(s)	375
BpuEI	CTTGAG	1 cut(s)	1617
BsaJI	CCNNGG	1 cut(s)	63
BsaWI	WCCGGW	1 cut(s)	2150
BsaXI	ACNNNNNCTCC	2 cut(s)	463, 493
Bsc4I	CCNNNNNNNGG	2 cut(s)	895, 975
Bse118I	RCCGGY	1 cut(s)	2150
Bse1I	ACTGG	4 cut(s)	29, 220, 758, 1784
Bse3DI	GCAATG	1 cut(s)	2026
BseBI	CCWGG	1 cut(s)	65
BseDI	CCNNGG	1 cut(s)	63
BseGI	GGATG	1 cut(s)	2194
BseLI	CCNNNNNNNGG	2 cut(s)	895, 975
BseMI	GCAATG	1 cut(s)	2026
BseMII	CTCAG	8 cut(s)	318, 731, 855, 1091, 1362, 1632, 1943, 2218
BseNI	ACTGG	4 cut(s)	29, 220, 758, 1784
BseRI	GAGGAG	2 cut(s)	936, 1904
BseXI	GCAGC	9 cut(s)	217, 220, 985, 1390, 1393, 1992, 2251, 2347, 2375
BsgI	GTGCAG	1 cut(s)	1064
Bsh1236I	CGCG	2 cut(s)	223, 2352
BshFI	GGCC	7 cut(s)	1007, 1174, 1303, 1469, 1687, 1901, 2349
BshNI	GGYRCC	1 cut(s)	166
BshTI	ACCGGT	1 cut(s)	2150
BsiHKAI	GWGCWC	1 cut(s)	422
BsiSI	CCGG	2 cut(s)	2063, 2151
BslFI	GGGAC	3 cut(s)	1484, 1891, 1981
BslI	CCNNNNNNNGG	2 cut(s)	895, 975
BsmAI	GTCTC	6 cut(s)	67, 523, 560, 629, 1760, 1932
BsmBI	CGTCTC	1 cut(s)	523
BsmFI	GGGAC	3 cut(s)	1484, 1891, 1981
BsmI	GAATGC	2 cut(s)	855, 2053
BsnI	GGCC	7 cut(s)	1007, 1174, 1303, 1469, 1687, 1901, 2349
Bsp119I	TTCGAA	1 cut(s)	375
Bsp1286I	GDGCHC	1 cut(s)	422
Bsp143I	GATC	5 cut(s)	128, 345, 391, 1338, 1690
BspACI	CCGC	6 cut(s)	164, 193, 440, 861, 976, 2350
BspANI	GGCC	7 cut(s)	1007, 1174, 1303, 1469, 1687, 1901, 2349
BspCNI	CTCAG	8 cut(s)	319, 730, 856, 1090, 1363, 1633, 1942, 2217
BspFNI	CGCG	2 cut(s)	223, 2352
BspLI	GGNNCC	5 cut(s)	168, 444, 848, 1304, 2108
BspMAI	CTGCAG	2 cut(s)	136, 2365
BspOI	GCTAGC	1 cut(s)	843
BspPI	GGATC	2 cut(s)	353, 399
BspQI	GCTCTTC	2 cut(s)	1481, 2120
BspT104I	TTCGAA	1 cut(s)	375
BspT107I	GGYRCC	1 cut(s)	166
BsrDI	GCAATG	1 cut(s)	2026
BsrFI	RCCGGY	1 cut(s)	2150
BsrI	ACTGG	4 cut(s)	29, 220, 758, 1784
BssAI	RCCGGY	1 cut(s)	2150
BssECI	CCNNGG	1 cut(s)	63
BssMI	GATC	5 cut(s)	128, 345, 391, 1338, 1690
BssSI	CACGAG	2 cut(s)	1977, 2274
Bst2BI	CACGAG	2 cut(s)	1977, 2274
Bst2UI	CCWGG	1 cut(s)	65
Bst4CI	ACNGT	7 cut(s)	43, 530, 707, 1423, 1968, 2147, 2200
Bst6I	CTCTTC	5 cut(s)	896, 1240, 1481, 2096, 2120
BstAPI	GCANNNNNTGC	1 cut(s)	59
BstBI	TTCGAA	1 cut(s)	375
BstC8I	GCNNGC	9 cut(s)	51, 383, 812, 841, 942, 1083, 1155, 1243, 1386
BstDEI	CTNAG	8 cut(s)	327, 717, 864, 1077, 1371, 1641, 1929, 2204
BstEII	GGTNACC	1 cut(s)	1778
BstF5I	GGATG	1 cut(s)	2194
BstFNI	CGCG	2 cut(s)	223, 2352
BstH2I	RGCGCY	1 cut(s)	686
BstHHI	GCGC	2 cut(s)	225, 685
BstKTI	GATC	5 cut(s)	131, 348, 394, 1341, 1693
BstMAI	GTCTC	6 cut(s)	67, 523, 560, 629, 1760, 1932
BstMBI	GATC	5 cut(s)	128, 345, 391, 1338, 1690
BstMWI	GCNNNNNNNGC	6 cut(s)	59, 1004, 1238, 1309, 1684, 1952
BstNI	CCWGG	1 cut(s)	65
BstPI	GGTNACC	1 cut(s)	1778
BstSCI	CCNGG	1 cut(s)	63
BstSFI	CTRYAG	4 cut(s)	132, 399, 615, 2361
BstUI	CGCG	2 cut(s)	223, 2352
BstV1I	GCAGC	9 cut(s)	217, 220, 985, 1390, 1393, 1992, 2251, 2347, 2375
BstV2I	GAAGAC	3 cut(s)	93, 531, 2164
BstX2I	RGATCY	1 cut(s)	128
BstXI	CCANNNNNNTGG	1 cut(s)	1875
BstYI	RGATCY	1 cut(s)	128
BsuRI	GGCC	7 cut(s)	1007, 1174, 1303, 1469, 1687, 1901, 2349
BtrI	CACGTC	1 cut(s)	1758
BtsCI	GGATG	1 cut(s)	2194
BtsI	GCAGTG	1 cut(s)	1498
BtsIMutI	CAGTG	3 cut(s)	355, 1498, 2196
Cac8I	GCNNGC	9 cut(s)	51, 383, 812, 841, 942, 1083, 1155, 1243, 1386
CaiI	CAGNNNCTG	4 cut(s)	602, 790, 1790, 2005
CfoI	GCGC	2 cut(s)	225, 685
Cfr10I	RCCGGY	1 cut(s)	2150
Cfr13I	GGNCC	5 cut(s)	121, 1302, 1556, 1685, 2347
CseI	GACGC	1 cut(s)	368
Csp6I	GTAC	3 cut(s)	2148, 2201, 2338
CspAI	ACCGGT	1 cut(s)	2150
CviAII	CATG	5 cut(s)	698, 970, 1621, 1903, 2222
CviQI	GTAC	3 cut(s)	2148, 2201, 2338
DdeI	CTNAG	8 cut(s)	327, 717, 864, 1077, 1371, 1641, 1929, 2204
DpnI	GATC	5 cut(s)	130, 347, 393, 1340, 1692
DpnII	GATC	5 cut(s)	128, 345, 391, 1338, 1690
DraI	TTTAAA	1 cut(s)	1107
DrdI	GACNNNNNNGTC	1 cut(s)	1971
DseDI	GACNNNNNNGTC	1 cut(s)	1971
EaeI	YGGCCR	1 cut(s)	1172
Eam1104I	CTCTTC	5 cut(s)	896, 1240, 1481, 2096, 2120
EarI	CTCTTC	5 cut(s)	896, 1240, 1481, 2096, 2120
Ecl136II	GAGCTC	1 cut(s)	420
Eco24I	GRGCYC	1 cut(s)	422
Eco47I	GGWCC	2 cut(s)	121, 1556
Eco53kI	GAGCTC	1 cut(s)	420
Eco57I	CTGAAG	4 cut(s)	543, 812, 1926, 2120
Eco91I	GGTNACC	1 cut(s)	1778
EcoICRI	GAGCTC	1 cut(s)	420
EcoO109I	RGGNCCY	2 cut(s)	1302, 1685
EcoO65I	GGTNACC	1 cut(s)	1778
EcoRI	GAATTC	1 cut(s)	928
EcoRII	CCWGG	1 cut(s)	63
EcoT38I	GRGCYC	1 cut(s)	422
Esp3I	CGTCTC	1 cut(s)	523
FaeI	CATG	5 cut(s)	701, 973, 1624, 1906, 2225
FalI	AAGNNNNNCTT	2 cut(s)	2237, 2269
FaqI	GGGAC	3 cut(s)	1484, 1891, 1981
FatI	CATG	5 cut(s)	697, 969, 1620, 1902, 2221
FauI	CCCGC	1 cut(s)	868
FbaI	TGATCA	1 cut(s)	1338
FblI	GTMKAC	1 cut(s)	1478
FokI	GGATG	1 cut(s)	2201
FriOI	GRGCYC	1 cut(s)	422
FspBI	CTAG	8 cut(s)	171, 270, 840, 933, 1137, 1536, 1542, 2160
GlaI	GCGC	2 cut(s)	224, 684
HaeII	RGCGCY	1 cut(s)	686
HaeIII	GGCC	7 cut(s)	1007, 1174, 1303, 1469, 1687, 1901, 2349
HapII	CCGG	2 cut(s)	2063, 2151
HgaI	GACGC	1 cut(s)	368
HhaI	GCGC	2 cut(s)	225, 685
Hin1II	CATG	5 cut(s)	701, 973, 1624, 1906, 2225
Hin6I	GCGC	2 cut(s)	223, 683
HinP1I	GCGC	2 cut(s)	223, 683
HincII	GTYRAC	3 cut(s)	655, 1479, 1567
HindII	GTYRAC	3 cut(s)	655, 1479, 1567
HpaI	GTTAAC	1 cut(s)	1567
HpaII	CCGG	2 cut(s)	2063, 2151
HphI	GGTGA	7 cut(s)	311, 1125, 1137, 1200, 1451, 1790, 1818
Hpy166II	GTNNAC	5 cut(s)	655, 703, 1479, 1567, 2279
Hpy8I	GTNNAC	5 cut(s)	655, 703, 1479, 1567, 2279
HpyCH4III	ACNGT	7 cut(s)	43, 530, 707, 1423, 1968, 2147, 2200
HpyCH4IV	ACGT	2 cut(s)	1039, 1757
HpyF10VI	GCNNNNNNNGC	6 cut(s)	59, 1004, 1238, 1309, 1684, 1952
HpyF3I	CTNAG	8 cut(s)	327, 717, 864, 1077, 1371, 1641, 1929, 2204
HpySE526I	ACGT	2 cut(s)	1039, 1757
Hsp92II	CATG	5 cut(s)	701, 973, 1624, 1906, 2225
HspAI	GCGC	2 cut(s)	223, 683
Ksp22I	TGATCA	1 cut(s)	1338
KspAI	GTTAAC	1 cut(s)	1567
Kzo9I	GATC	5 cut(s)	128, 345, 391, 1338, 1690
LguI	GCTCTTC	2 cut(s)	1481, 2120
LmnI	GCTCC	5 cut(s)	417, 1353, 1741, 1891, 2112
Lsp1109I	GCAGC	9 cut(s)	217, 220, 985, 1390, 1393, 1992, 2251, 2347, 2375
LweI	GCATC	9 cut(s)	191, 752, 777, 1687, 1903, 1992, 2074, 2128, 2260
MaeI	CTAG	8 cut(s)	171, 270, 840, 933, 1137, 1536, 1542, 2160
MaeII	ACGT	2 cut(s)	1039, 1757
MaeIII	GTNAC	7 cut(s)	538, 749, 831, 1366, 1426, 1778, 1824
MalI	GATC	5 cut(s)	130, 347, 393, 1340, 1692
MboI	GATC	5 cut(s)	128, 345, 391, 1338, 1690
MflI	RGATCY	1 cut(s)	128
MhlI	GDGCHC	1 cut(s)	422
MlsI	TGGCCA	1 cut(s)	1174
MluNI	TGGCCA	1 cut(s)	1174
MlyI	GAGTC	6 cut(s)	107, 535, 562, 631, 1681, 1832
MmeI	TCCRAC	1 cut(s)	1277
Mox20I	TGGCCA	1 cut(s)	1174
MroXI	GAANNNNTTC	2 cut(s)	1582, 2212
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	9 cut(s)	239, 246, 333, 425, 819, 963, 1106, 1566, 2446
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	3 cut(s)	863, 976, 2360
MspI	CCGG	2 cut(s)	2063, 2151
MspR9I	CCNGG	1 cut(s)	65
Mva1269I	GAATGC	2 cut(s)	855, 2053
MvaI	CCWGG	1 cut(s)	65
MvnI	CGCG	2 cut(s)	223, 2352
MwoI	GCNNNNNNNGC	6 cut(s)	59, 1004, 1238, 1309, 1684, 1952
NdeII	GATC	5 cut(s)	128, 345, 391, 1338, 1690
NheI	GCTAGC	1 cut(s)	839
NlaIII	CATG	5 cut(s)	701, 973, 1624, 1906, 2225
NlaIV	GGNNCC	5 cut(s)	168, 444, 848, 1304, 2108
NmuCI	GTSAC	7 cut(s)	538, 749, 831, 1366, 1426, 1778, 1824
NspV	TTCGAA	1 cut(s)	375
PciSI	GCTCTTC	2 cut(s)	1481, 2120
PctI	GAATGC	2 cut(s)	855, 2053
PdmI	GAANNNNTTC	2 cut(s)	1582, 2212
PinAI	ACCGGT	1 cut(s)	2150
PleI	GAGTC	6 cut(s)	106, 535, 562, 631, 1680, 1831
PpsI	GAGTC	6 cut(s)	106, 535, 562, 631, 1680, 1831
Psp124BI	GAGCTC	1 cut(s)	422
Psp6I	CCWGG	1 cut(s)	63
PspEI	GGTNACC	1 cut(s)	1778
PspGI	CCWGG	1 cut(s)	63
PspN4I	GGNNCC	5 cut(s)	168, 444, 848, 1304, 2108
PspPI	GGNCC	5 cut(s)	121, 1302, 1556, 1685, 2347
PstI	CTGCAG	2 cut(s)	136, 2365
PstNI	CAGNNNCTG	4 cut(s)	602, 790, 1790, 2005
PsuI	RGATCY	1 cut(s)	128
PvuII	CAGCTG	1 cut(s)	2360
RsaI	GTAC	3 cut(s)	2149, 2202, 2339
RsaNI	GTAC	3 cut(s)	2148, 2201, 2338
SacI	GAGCTC	1 cut(s)	422
SalI	GTCGAC	1 cut(s)	1477
SapI	GCTCTTC	2 cut(s)	1481, 2120
SaqAI	TTAA	9 cut(s)	239, 246, 333, 425, 819, 963, 1106, 1566, 2446
Sau3AI	GATC	5 cut(s)	128, 345, 391, 1338, 1690
Sau96I	GGNCC	5 cut(s)	121, 1302, 1556, 1685, 2347
SchI	GAGTC	6 cut(s)	107, 535, 562, 631, 1681, 1832
ScrFI	CCNGG	1 cut(s)	65
SduI	GDGCHC	1 cut(s)	422
SfaNI	GCATC	9 cut(s)	191, 752, 777, 1687, 1903, 1992, 2074, 2128, 2260
SfcI	CTRYAG	4 cut(s)	132, 399, 615, 2361
SfuI	TTCGAA	1 cut(s)	375
SinI	GGWCC	2 cut(s)	121, 1556
SmlI	CTYRAG	1 cut(s)	1632
SmoI	CTYRAG	1 cut(s)	1632
SsiI	CCGC	6 cut(s)	164, 193, 440, 861, 976, 2350
SspI	AATATT	2 cut(s)	2035, 2073
SspMI	CTAG	8 cut(s)	171, 270, 840, 933, 1137, 1536, 1542, 2160
SstI	GAGCTC	1 cut(s)	422
StyD4I	CCNGG	1 cut(s)	63
TaaI	ACNGT	7 cut(s)	43, 530, 707, 1423, 1968, 2147, 2200
TaiI	ACGT	2 cut(s)	1042, 1760
TaqI	TCGA	6 cut(s)	145, 314, 375, 494, 746, 1478
TatI	WGTACW	1 cut(s)	2200
TauI	GCSGC	2 cut(s)	167, 2352
Tru1I	TTAA	9 cut(s)	239, 246, 333, 425, 819, 963, 1106, 1566, 2446
Tru9I	TTAA	9 cut(s)	239, 246, 333, 425, 819, 963, 1106, 1566, 2446
TscAI	CASTG	3 cut(s)	355, 1498, 2203
TseFI	GTSAC	7 cut(s)	538, 749, 831, 1366, 1426, 1778, 1824
TseI	GCWGC	9 cut(s)	230, 233, 973, 1378, 1381, 2005, 2239, 2360, 2363
Tsp45I	GTSAC	7 cut(s)	538, 749, 831, 1366, 1426, 1778, 1824
TspDTI	ATGAA	8 cut(s)	306, 686, 1002, 1611, 1823, 2037, 2210, 2274
TspGWI	ACGGA	2 cut(s)	1416, 1973
TspRI	CASTG	3 cut(s)	355, 1498, 2203
VpaK11BI	GGWCC	2 cut(s)	121, 1556
XapI	RAATTY	5 cut(s)	35, 928, 1579, 1836, 2309
XbaI	TCTAGA	2 cut(s)	932, 1535
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1061, 1291, 1618
XmiI	GTMKAC	1 cut(s)	1478
XmnI	GAANNNNTTC	2 cut(s)	1582, 2212
XspI	CTAG	8 cut(s)	171, 270, 840, 933, 1137, 1536, 1542, 2160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.