Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0007175

Physical Location & Seq

Genomic Coordinates Forward (+)

55229563 .. 55233478

Gene Structure 3916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0458000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGAAATTTCTCAAGCTTTTCCGGCAATGCTCCGTCATTACTAACCGGACGGGCCCAATTGCCTCAGTTCGGGTCGGGTTATTGGGTAATGCGGGGCCCAAAAGAGGGTTTTGCTCGAGCACAGAGGATTCGGAGCTGAAGGACTTGATGGAGTACATGGACTCACTCAAGAACTACGAGAAATCTGGGGTTCCGGTCGGGGCGGGTACGGATTCTGACGACGGGTTCGATCTGGGTCGGATGCGGACGTTGATGGAGCTTCTGGGTCGTCCTCATTTCAAGTTCAAGGCGGTTCACATTGCCGGAACGAAAGGAAAAGGATCAACAGCTGCGTTTCTGTGCAACATTTTGAGGGCAGAAGGGTATTCAGTTGGTTGTTATACTAGCCCACATATTCGAACTATCAGGGAGCGAATAACTTTGGGAAGGTCTGGTGAGCCGGTGTCGGCAAAGGCTTTGAATTCTCTGTTTCAAGAGAATAAGGAGACTCTGGATCGTGCAATGAAAGTTGAAAATGGATATATTAGTCACTTTGAGGTTCTTACTGCTCTGGCATTCACACTATTTGCTAAAGAGAAGGTTGATATTGCAGTGATTGAGGCTGGCTTGGGGGGTTCACGGGATGCAACTAATGTCATTCCTAGCTCTGGACTTGCCACATCGGTCATTACTACAATAGGAGAGGAACATTTGGGTGCACTTGGAGGTTCTTTGGAAAGCATTGCAATGGCGAAGTCTGGAATCATGAAACATGGCCGCCCAGTGGTTTTGGGCGGTCCATTTCTTCCACATATTGAGTGCATTCTTCGTGATAAAGCTCTGTTGATGAGTTCTCCTGTAGTATTAGCGTCTGATACTAGAAATAGAAGCAAGATAAATGGTTTTAGCATGCATGATGGTAGACCCTTCCAATCTTGTGATATAGTGCTACAACTTGAGAGTGACTTAAAGCTGTCAATTGAATTATTGGATTTGAAACTATACATGCTTGGAAGTCACCAACTGCAGAATGCTGCAACTGCTACTTGTGCAGCACTATGTCTCCGAAACTTAGGATGGAGAATTTCAGATGCATCCATTAGAACTGGTTTACAGCAGACACATCTTCTTGGAAGAAGTCAATTTCTAACATCGAAGGAAGCTCAGGCATTGGGATTGTATGGAGCAACAATATTGCTTGATGGAGCCCACACCAAAGAATCTGCTAAAGCGCTGATGGACACTATAAAGATGACTTTCCCAGAGTCGCGATTGACTCTTGTGGTTGCAATGGCAAACGACAAAGATCATCTAGGTTTCGCAAGAGATTTTCTTTCAGGTGGGCATCTAGAGGGTGTCCTCTGTACAGAAGCTAACATTGCTGGGGGGAAATCTCGGACAACTGCAGCGTCAGTGCTAAGAAATTGCTGGATCCAAGCTTCCAAAGAATTGGGCCTAGATATTGTTCATGATCAAATGACAGAATGTCAAAACTTTTCAATGGACCAATTAGTTGGCTTAAGCACGTCGGAAAAGAGACCATTATTGGCTGCTGTGCCTTCATTTCCGGATTCCATCAAGATTGCAAATCAGATTTCCAGAGGAAGAACTAGGGATCAATCTCATATTACTGTAATCACTGGCTCTCTACATATAGTTTCATTGACATTAGCCACCCTCAATAGAAAAGGTTTTGTCACTATGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rhodanese

Protein Analysis

562

Amino Acids

60.73

Weight (kDa)

8.85

Isoelectric Point (pI)

42.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mur_ligase_M	PF08245	100 - 345	3.1e-08	Mur ligase middle domain
Mur_ligase_C	PF02875	388 - 452	3.7e-06	Mur ligase, glutamate ligase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59780
fragaria_vesca	FvH4_1g00540 FvH4_1g00540 FvH4_1g00540 FvH4_1g00540 FvH4_1g00540 FvH4_1g00540
malus_domestica	MD02G1004500.v1.1 MD15G1148200.v1.1
prunus_persica	Prupe.7G266600_v2.0.a1 Prupe.7G266600_v2.0.a1 Prupe.7G266600_v2.0.a1 Prupe.7G266600_v2.0.a1
pyrus_communis	pycom15g13250
rosa_chinensis	RchiOBHm_Chr2g0085171
rosa_laevigata	RLG00000015662
rosa_multiflora	Rmu_co8300831.1_g000001 Rmu_sc0008647.1_g000008
rosa_roxburghii	Rroxscaffold_2G00155590
rosa_rugosa	Rorug01G0458000
rosa_samantha	Rh2AG006400 Rh2BG007200 Rh2CG008000 Rh2DG008200
rosa_wichuraiana	Rw2G000610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	901
AccII	CGCG	1 cut(s)	1249
AccIII	TCCGGA	1 cut(s)	1546
AciI	CCGC	6 cut(s)	92, 203, 244, 290, 757, 774
AclWI	GGATC	5 cut(s)	328, 501, 1405, 1418, 1602
AcoI	YGGCCR	1 cut(s)	754
AcsI	RAATTY	3 cut(s)	5, 460, 1062
AcuI	CTGAAG	1 cut(s)	158
AfaI	GTAC	3 cut(s)	155, 208, 1345
AfeI	AGCGCT	1 cut(s)	1212
AfiI	CCNNNNNNNGG	5 cut(s)	69, 104, 105, 647, 763
AflII	CTTAAG	1 cut(s)	1498
AgsI	TTSAA	8 cut(s)	280, 286, 460, 473, 512, 962, 976, 1479
AhdI	GACNNNNNGTC	1 cut(s)	1464
AjiI	CACGTC	1 cut(s)	1506
Alw21I	GWGCWC	2 cut(s)	122, 700
Alw26I	GTCTC	3 cut(s)	479, 1046, 1510
Alw44I	GTGCAC	1 cut(s)	696
AlwI	GGATC	5 cut(s)	328, 501, 1405, 1418, 1602
Ama87I	CYCGRG	1 cut(s)	115
Aor13HI	TCCGGA	1 cut(s)	1546
Aor51HI	AGCGCT	1 cut(s)	1212
AoxI	GGCC	4 cut(s)	52, 95, 754, 1432
ApaI	GGGCCC	2 cut(s)	56, 99
ApaLI	GTGCAC	1 cut(s)	696
ApeKI	GCWGC	5 cut(s)	329, 1013, 1031, 1385, 1529
ApoI	RAATTY	3 cut(s)	5, 460, 1062
ArsI	GACNNNNNNTTYG	2 cut(s)	209, 241
AspLEI	GCGC	1 cut(s)	1213
AspS9I	GGNCC	7 cut(s)	52, 53, 95, 96, 776, 1432, 1483
AsuHPI	GGTGA	2 cut(s)	446, 989
AsuII	TTCGAA	1 cut(s)	397
AvaI	CYCGRG	1 cut(s)	115
AvaII	GGWCC	2 cut(s)	776, 1483
BaeGI	GKGCMC	3 cut(s)	56, 99, 700
BamHI	GGATCC	1 cut(s)	1410
BanII	GRGCYC	3 cut(s)	56, 99, 1189
Bbv12I	GWGCWC	2 cut(s)	122, 700
BbvI	GCAGC	5 cut(s)	316, 1000, 1043, 1397, 1516
BccI	CCATC	7 cut(s)	142, 247, 890, 1050, 1175, 1210, 1562
BclI	TGATCA	1 cut(s)	1450
BcoDI	GTCTC	3 cut(s)	479, 1046, 1510
BfaI	CTAG	8 cut(s)	384, 642, 858, 1292, 1328, 1436, 1590, 1687
BfmI	CTRYAG	3 cut(s)	837, 1004, 1383
BfoI	RGCGCY	1 cut(s)	1214
BfrI	CTTAAG	1 cut(s)	1498
BisI	GCNGC	6 cut(s)	330, 757, 1014, 1032, 1386, 1530
BlsI	GCNGC	6 cut(s)	331, 758, 1015, 1033, 1387, 1531
Bme18I	GGWCC	2 cut(s)	776, 1483
BmeRI	GACNNNNNGTC	1 cut(s)	1464
BmeT110I	CYCGRG	1 cut(s)	115
BmgBI	CACGTC	1 cut(s)	1506
BmgT120I	GGNCC	7 cut(s)	52, 53, 95, 96, 776, 1432, 1483
BmiI	GGNNCC	6 cut(s)	54, 96, 97, 192, 1186, 1412
BmrI	ACTGGG	1 cut(s)	755
BmsI	GCATC	5 cut(s)	231, 613, 1060, 1082, 1333
BmuI	ACTGGG	1 cut(s)	755
Bpu10I	CCTNAGC	1 cut(s)	1143
Bpu14I	TTCGAA	1 cut(s)	397
BpuEI	CTTGAG	2 cut(s)	152, 956
BsaI	GGTCTC	1 cut(s)	1510
BsaWI	WCCGGW	3 cut(s)	45, 193, 1546
BsaXI	ACNNNNNCTCC	2 cut(s)	1026, 1056
Bsc4I	CCNNNNNNNGG	5 cut(s)	69, 104, 105, 647, 763
Bse118I	RCCGGY	1 cut(s)	439
Bse1I	ACTGG	3 cut(s)	761, 1090, 1624
Bse3DI	GCAATG	7 cut(s)	32, 297, 507, 720, 732, 1275, 1356
BseAI	TCCGGA	1 cut(s)	1546
BseGI	GGATG	4 cut(s)	246, 628, 1061, 1073
BseLI	CCNNNNNNNGG	5 cut(s)	69, 104, 105, 647, 763
BseMI	GCAATG	7 cut(s)	32, 297, 507, 720, 732, 1275, 1356
BseMII	CTCAG	2 cut(s)	78, 1157
BseNI	ACTGG	3 cut(s)	761, 1090, 1624
BseSI	GKGCMC	3 cut(s)	56, 99, 700
BseXI	GCAGC	5 cut(s)	316, 1000, 1043, 1397, 1516
BseYI	CCCAGC	1 cut(s)	1361
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	1 cut(s)	1249
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	4 cut(s)	54, 97, 756, 1434
BsiEI	CGRYCG	1 cut(s)	198
BsiHKAI	GWGCWC	2 cut(s)	122, 700
BsiHKCI	CYCGRG	1 cut(s)	115
BsiSI	CCGG	6 cut(s)	22, 46, 194, 303, 440, 1547
BslI	CCNNNNNNNGG	5 cut(s)	69, 104, 105, 647, 763
BsmAI	GTCTC	3 cut(s)	479, 1046, 1510
BsmI	GAATGC	3 cut(s)	554, 801, 1015
BsnI	GGCC	4 cut(s)	54, 97, 756, 1434
Bso31I	GGTCTC	1 cut(s)	1510
BsoBI	CYCGRG	1 cut(s)	115
Bsp119I	TTCGAA	1 cut(s)	397
Bsp120I	GGGCCC	2 cut(s)	52, 95
Bsp1286I	GDGCHC	5 cut(s)	56, 99, 122, 700, 1189
Bsp13I	TCCGGA	1 cut(s)	1546
Bsp1407I	TGTACA	1 cut(s)	1343
Bsp143I	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
Bsp68I	TCGCGA	1 cut(s)	1249
BspACI	CCGC	6 cut(s)	92, 203, 244, 290, 757, 774
BspANI	GGCC	4 cut(s)	54, 97, 756, 1434
BspCNI	CTCAG	2 cut(s)	77, 1156
BspEI	TCCGGA	1 cut(s)	1546
BspFNI	CGCG	1 cut(s)	1249
BspHI	TCATGA	2 cut(s)	744, 1447
BspLI	GGNNCC	6 cut(s)	54, 96, 97, 192, 1186, 1412
BspMAI	CTGCAG	2 cut(s)	1008, 1387
BspPI	GGATC	5 cut(s)	328, 501, 1405, 1418, 1602
BspT104I	TTCGAA	1 cut(s)	397
BspTI	CTTAAG	1 cut(s)	1498
BspTNI	GGTCTC	1 cut(s)	1510
BsrDI	GCAATG	7 cut(s)	32, 297, 507, 720, 732, 1275, 1356
BsrFI	RCCGGY	1 cut(s)	439
BsrGI	TGTACA	1 cut(s)	1343
BsrI	ACTGG	3 cut(s)	761, 1090, 1624
BssAI	RCCGGY	1 cut(s)	439
BssMI	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
Bst4CI	ACNGT	1 cut(s)	1612
BstAFI	CTTAAG	1 cut(s)	1498
BstAUI	TGTACA	1 cut(s)	1343
BstBI	TTCGAA	1 cut(s)	397
BstC8I	GCNNGC	2 cut(s)	604, 890
BstDEI	CTNAG	4 cut(s)	64, 1051, 1143, 1397
BstF5I	GGATG	4 cut(s)	246, 628, 1061, 1073
BstFNI	CGCG	1 cut(s)	1249
BstH2I	RGCGCY	1 cut(s)	1214
BstHHI	GCGC	1 cut(s)	1213
BstKTI	GATC	7 cut(s)	232, 323, 496, 1288, 1413, 1453, 1597
BstMAI	GTCTC	3 cut(s)	479, 1046, 1510
BstMBI	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
BstMCI	CGRYCG	1 cut(s)	198
BstMWI	GCNNNNNNNGC	4 cut(s)	22, 1019, 1028, 1358
BstNSI	RCATGY	2 cut(s)	892, 988
BstSFI	CTRYAG	3 cut(s)	837, 1004, 1383
BstSLI	GKGCMC	3 cut(s)	56, 99, 700
BstUI	CGCG	1 cut(s)	1249
BstV1I	GCAGC	5 cut(s)	316, 1000, 1043, 1397, 1516
BstX2I	RGATCY	1 cut(s)	1410
BstXI	CCANNNNNNTGG	2 cut(s)	1429, 1493
BstYI	RGATCY	1 cut(s)	1410
BsuRI	GGCC	4 cut(s)	54, 97, 756, 1434
BtrI	CACGTC	1 cut(s)	1506
BtsCI	GGATG	4 cut(s)	246, 628, 1061, 1073
BtsI	GCAGTG	1 cut(s)	597
BtsIMutI	CAGTG	4 cut(s)	597, 768, 1398, 1617
BtuMI	TCGCGA	1 cut(s)	1249
Cac8I	GCNNGC	2 cut(s)	604, 890
CciI	TCATGA	2 cut(s)	744, 1447
CfoI	GCGC	1 cut(s)	1213
Cfr10I	RCCGGY	1 cut(s)	439
Cfr13I	GGNCC	7 cut(s)	52, 53, 95, 96, 776, 1432, 1483
CseI	GACGC	2 cut(s)	837, 1377
Csp6I	GTAC	3 cut(s)	154, 207, 1344
CviAII	CATG	7 cut(s)	157, 745, 752, 889, 893, 985, 1448
CviQI	GTAC	3 cut(s)	154, 207, 1344
DdeI	CTNAG	4 cut(s)	64, 1051, 1143, 1397
DpnI	GATC	7 cut(s)	231, 322, 495, 1287, 1412, 1452, 1596
DpnII	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
DriI	GACNNNNNGTC	1 cut(s)	1464
EaeI	YGGCCR	1 cut(s)	754
Eam1105I	GACNNNNNGTC	1 cut(s)	1464
Eco24I	GRGCYC	3 cut(s)	56, 99, 1189
Eco31I	GGTCTC	1 cut(s)	1510
Eco47I	GGWCC	2 cut(s)	776, 1483
Eco47III	AGCGCT	1 cut(s)	1212
Eco57I	CTGAAG	1 cut(s)	158
Eco88I	CYCGRG	1 cut(s)	115
EcoO109I	RGGNCCY	1 cut(s)	95
EcoRI	GAATTC	1 cut(s)	460
EcoT22I	ATGCAT	2 cut(s)	894, 1075
EcoT38I	GRGCYC	3 cut(s)	56, 99, 1189
FaeI	CATG	7 cut(s)	160, 748, 755, 892, 896, 988, 1451
FatI	CATG	7 cut(s)	156, 744, 751, 888, 892, 984, 1447
FauI	CCCGC	2 cut(s)	85, 196
FbaI	TGATCA	1 cut(s)	1450
FblI	GTMKAC	1 cut(s)	901
Fnu4HI	GCNGC	6 cut(s)	330, 757, 1014, 1032, 1386, 1530
FokI	GGATG	4 cut(s)	253, 635, 1060, 1068
FriOI	GRGCYC	3 cut(s)	56, 99, 1189
Fsp4HI	GCNGC	6 cut(s)	330, 757, 1014, 1032, 1386, 1530
FspBI	CTAG	8 cut(s)	384, 642, 858, 1292, 1328, 1436, 1590, 1687
GlaI	GCGC	1 cut(s)	1212
GluI	GCNGC	6 cut(s)	330, 757, 1014, 1032, 1386, 1530
GsaI	CCCAGC	1 cut(s)	1365
HaeII	RGCGCY	1 cut(s)	1214
HaeIII	GGCC	4 cut(s)	54, 97, 756, 1434
HapII	CCGG	6 cut(s)	22, 46, 194, 303, 440, 1547
HgaI	GACGC	2 cut(s)	837, 1377
HhaI	GCGC	1 cut(s)	1213
Hin1II	CATG	7 cut(s)	160, 748, 755, 892, 896, 988, 1451
Hin6I	GCGC	1 cut(s)	1211
HinP1I	GCGC	1 cut(s)	1211
HindIII	AAGCTT	2 cut(s)	14, 1416
HinfI	GANTC	9 cut(s)	128, 161, 212, 487, 741, 1199, 1244, 1255, 1550
HpaII	CCGG	6 cut(s)	22, 46, 194, 303, 440, 1547
HphI	GGTGA	2 cut(s)	446, 989
Hpy166II	GTNNAC	5 cut(s)	295, 617, 698, 902, 1091
Hpy188I	TCNGA	9 cut(s)	133, 217, 240, 853, 1046, 1069, 1377, 1510, 1572
Hpy8I	GTNNAC	5 cut(s)	295, 617, 698, 902, 1091
Hpy99I	CGWCG	2 cut(s)	224, 1510
HpyAV	CCTTC	7 cut(s)	133, 353, 420, 571, 916, 1129, 1548
HpyCH4III	ACNGT	1 cut(s)	1612
HpyCH4IV	ACGT	2 cut(s)	248, 1505
HpyF10VI	GCNNNNNNNGC	4 cut(s)	22, 1019, 1028, 1358
HpyF3I	CTNAG	4 cut(s)	64, 1051, 1143, 1397
HpySE526I	ACGT	2 cut(s)	248, 1505
Hsp92II	CATG	7 cut(s)	160, 748, 755, 892, 896, 988, 1451
HspAI	GCGC	1 cut(s)	1211
Kpn2I	TCCGGA	1 cut(s)	1546
Ksp22I	TGATCA	1 cut(s)	1450
Kzo9I	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
LmnI	GCTCC	6 cut(s)	35, 133, 256, 409, 1163, 1184
Lsp1109I	GCAGC	5 cut(s)	316, 1000, 1043, 1397, 1516
LweI	GCATC	5 cut(s)	231, 613, 1060, 1082, 1333
MaeI	CTAG	8 cut(s)	384, 642, 858, 1292, 1328, 1436, 1590, 1687
MaeII	ACGT	2 cut(s)	248, 1505
MaeIII	GTNAC	4 cut(s)	527, 941, 995, 1675
MalI	GATC	7 cut(s)	231, 322, 495, 1287, 1412, 1452, 1596
MboI	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
MboII	GAAGA	5 cut(s)	776, 797, 1097, 1125, 1596
MfeI	CAATTG	2 cut(s)	57, 957
MflI	RGATCY	1 cut(s)	1410
MhlI	GDGCHC	5 cut(s)	56, 99, 122, 700, 1189
MlyI	GAGTC	4 cut(s)	155, 481, 1249, 1253
MmeI	TCCRAC	2 cut(s)	218, 1488
Mph1103I	ATGCAT	2 cut(s)	894, 1075
MroI	TCCGGA	1 cut(s)	1546
MseI	TTAA	2 cut(s)	947, 1499
MslI	CAYNNNNRTG	2 cut(s)	693, 725
MspA1I	CMGCKG	1 cut(s)	329
MspCI	CTTAAG	1 cut(s)	1498
MspI	CCGG	6 cut(s)	22, 46, 194, 303, 440, 1547
MunI	CAATTG	2 cut(s)	57, 957
Mva1269I	GAATGC	3 cut(s)	554, 801, 1015
MvnI	CGCG	1 cut(s)	1249
MwoI	GCNNNNNNNGC	4 cut(s)	22, 1019, 1028, 1358
NdeII	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
NlaIII	CATG	7 cut(s)	160, 748, 755, 892, 896, 988, 1451
NlaIV	GGNNCC	6 cut(s)	54, 96, 97, 192, 1186, 1412
NmuCI	GTSAC	4 cut(s)	527, 941, 995, 1675
NruI	TCGCGA	1 cut(s)	1249
NsiI	ATGCAT	2 cut(s)	894, 1075
NspI	RCATGY	2 cut(s)	892, 988
NspV	TTCGAA	1 cut(s)	397
PaeI	GCATGC	1 cut(s)	892
PaeR7I	CTCGAG	1 cut(s)	115
PagI	TCATGA	2 cut(s)	744, 1447
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PctI	GAATGC	3 cut(s)	554, 801, 1015
PfeI	GAWTC	5 cut(s)	128, 212, 741, 1199, 1550
PkrI	GCNGC	6 cut(s)	331, 758, 1015, 1033, 1387, 1531
PleI	GAGTC	4 cut(s)	155, 481, 1249, 1252
PpsI	GAGTC	4 cut(s)	155, 481, 1249, 1252
PspFI	CCCAGC	1 cut(s)	1361
PspN4I	GGNNCC	6 cut(s)	54, 96, 97, 192, 1186, 1412
PspOMI	GGGCCC	2 cut(s)	52, 95
PspPI	GGNCC	7 cut(s)	52, 53, 95, 96, 776, 1432, 1483
PspXI	VCTCGAGB	1 cut(s)	115
PstI	CTGCAG	2 cut(s)	1008, 1387
PsuI	RGATCY	1 cut(s)	1410
PvuII	CAGCTG	1 cut(s)	329
RruI	TCGCGA	1 cut(s)	1249
RsaI	GTAC	3 cut(s)	155, 208, 1345
RsaNI	GTAC	3 cut(s)	154, 207, 1344
RseI	CAYNNNNRTG	2 cut(s)	693, 725
SaqAI	TTAA	2 cut(s)	947, 1499
SatI	GCNGC	6 cut(s)	330, 757, 1014, 1032, 1386, 1530
Sau3AI	GATC	7 cut(s)	229, 320, 493, 1285, 1410, 1450, 1594
Sau96I	GGNCC	7 cut(s)	52, 53, 95, 96, 776, 1432, 1483
SchI	GAGTC	4 cut(s)	155, 481, 1249, 1253
SduI	GDGCHC	5 cut(s)	56, 99, 122, 700, 1189
SfaNI	GCATC	5 cut(s)	231, 613, 1060, 1082, 1333
SfcI	CTRYAG	3 cut(s)	837, 1004, 1383
Sfr274I	CTCGAG	1 cut(s)	115
SfuI	TTCGAA	1 cut(s)	397
SinI	GGWCC	2 cut(s)	776, 1483
SlaI	CTCGAG	1 cut(s)	115
SmiMI	CAYNNNNRTG	2 cut(s)	693, 725
SmlI	CTYRAG	5 cut(s)	11, 115, 167, 935, 1498
SmoI	CTYRAG	5 cut(s)	11, 115, 167, 935, 1498
SphI	GCATGC	1 cut(s)	892
SsiI	CCGC	6 cut(s)	92, 203, 244, 290, 757, 774
SspI	AATATT	1 cut(s)	1173
SspMI	CTAG	8 cut(s)	384, 642, 858, 1292, 1328, 1436, 1590, 1687
TaaI	ACNGT	1 cut(s)	1612
TaiI	ACGT	2 cut(s)	251, 1508
TaqI	TCGA	4 cut(s)	116, 228, 397, 1133
TaqII	GACCGA	1 cut(s)	652
TatI	WGTACW	2 cut(s)	153, 1343
TauI	GCSGC	1 cut(s)	759
TfiI	GAWTC	5 cut(s)	128, 212, 741, 1199, 1550
Tru1I	TTAA	2 cut(s)	947, 1499
Tru9I	TTAA	2 cut(s)	947, 1499
TscAI	CASTG	4 cut(s)	597, 768, 1398, 1624
TseFI	GTSAC	4 cut(s)	527, 941, 995, 1675
TseI	GCWGC	5 cut(s)	329, 1013, 1031, 1385, 1529
Tsp45I	GTSAC	4 cut(s)	527, 941, 995, 1675
TspDTI	ATGAA	6 cut(s)	17, 518, 761, 1436, 1530, 1629
TspGWI	ACGGA	2 cut(s)	22, 224
TspRI	CASTG	4 cut(s)	597, 768, 1398, 1624
Vha464I	CTTAAG	1 cut(s)	1498
VneI	GTGCAC	1 cut(s)	696
VpaK11BI	GGWCC	2 cut(s)	776, 1483
XapI	RAATTY	3 cut(s)	5, 460, 1062
XbaI	TCTAGA	1 cut(s)	1327
XceI	RCATGY	2 cut(s)	892, 988
XhoI	CTCGAG	1 cut(s)	115
XmiI	GTMKAC	1 cut(s)	901
XspI	CTAG	8 cut(s)	384, 642, 858, 1292, 1328, 1436, 1590, 1687
Zsp2I	ATGCAT	2 cut(s)	894, 1075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.