Rorug02G0144600

Transcriptional regulator of RNA polII, SAGA, subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0016735
Physical Location & Seq
Reverse (-)
12716677 .. 12722140
5464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0144600.1

Sequence Viewer

Length: 1326 bp
ATGCCAGGACCGGGATCGCTGGTGAAGAACCAGCGTCTAGTAAACGCGGTTGTCCAAAGGTTTCAGAGATGCATGACCACCACAGCAGCCGTCATGAGCTTCGGGGACGGCAACCATGGCGCTCTGGGCTTGCCCACTTCCTTAATGGGCCTTGGTGTGGACGCCTACGAGCCCACCCGGGTCCCTTCTCTACCTCCTGACATCACCAGCGTCACCGCCGGGCATTACCACTCCCTGGCCGTCACTTCCGAAGGCCAGCTCTGGGCTTGGGGCCGAGACCTCGAGGCCCAGCTCGGCCGTGGAGGTCCTTCTCCGAGAGATTTGTGGAATGAACCAAGGAGAGTAACAGGATTGGATCAAGTAAATGTTTGTTCTGCATTTGCATCCGGTGTCATTTCTGCAGCCATTGGAGATGATGGTTCTTTGTGGGTTTGGGGAAAGTCAAAGCGTGGCCAGCTTGGTCTGGGAGAGCAAGTCATGGAGGCTGTGGTTCCTTCCCGAGTTGAAGCACTTGCTGGAGAAAAAATAACTAAGGTTGCACTTGGTTGGGGGCATGCTCTTGCATTGACTGAGGATGGAAAGTTATTTGGTTGGGGTTATTTTGCTGATGGTAGGTTAGGAAGCATTAAAGAATCTTTGGAGACATCTCAACTGGAATCTACTTCCAATAATCAAGAACTGTCGAGTTCATCTTTGGAAGCTGCTGAGAAGCTGGTTTTAGGAGGAATGGCCAAGGAGAATAACATGCCAATAGTTTGGGAACCCAGTTTAGTGAGGGAACTACAGTGTATTGAAGTTGTAGACATTGCATGTGGTCTTGATCATTCATTAATTCTTTGTGGTGATGGGACGCTACTGAGCTGTGGGAGCAATGTATATGGTCAGTTGGGAAGAGAAAAACAGGATGTAGGATTGTTTCCTGTTGATATAAGCTTCCGTCCAATGTCTATAGCAGCCGGGCTTGGCCATTCTTTGGCAATTTGCCAGGTTCCATCATCAGATGTTATAGGAGGAGCCGCAGGTGTCATTACATGGGGTTGGAATCAGACCTCTCAGCTCGGTAGGGATGGGCCAGAAAATATTCCATTAGGAGTTGAAGGCTTGGAAGGGGAAACTCCTGTATCAGTAGCAGGAGGTCGTGTGCATTCCATTGCTCTAACATCAAAGAGAGAAGTGTGGGTTTGGGGTAGTGGTAAGAATGGAAGGCTTGGGTTAGGAAGCTCCTGTGATGAACCTGAACCAATTTTGCTGGACTCTGTAGAGGGTTGTGATGTTTTACAAGCTGTGTCAGGGTTTGATCATAATCTTCTCTTAATTGCCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAGA-Tad1

Protein Analysis

441

Amino Acids

46.41

Weight (kDa)

4.85

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 31 - 436 5.9e-81 RCC1-like domain
RCC1 PF00415 33 - 81 3.3e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 68 - 93 1.2e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 84 - 136 3.9e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 139 - 189 1.4e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 176 - 203 1.3e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 266 - 295 1e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 282 - 327 6.1e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 342 - 386 1.7e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 391 - 438 3e-08 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016735)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17350 FvH4_1g17350
prunus_persica Prupe.6G223300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0107521
rosa_laevigata RLG00000017588
rosa_multiflora Rmu_sc0001065.1_g000016
rosa_roxburghii Rroxscaffold_2G00136220
rosa_rugosa Rorug02G0144600 Rorug02G0144700
rosa_samantha Rh2AG194500 Rh2BG207200 Rh2CG199700 Rh2DG201800
rosa_wichuraiana Rw2G015410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1010
AbsI CCTCGAGG 1 cut(s) 281
Acc36I ACCTGC 1 cut(s) 1010
AccB7I CCANNNNNTGG 2 cut(s) 235, 973
AccI GTMKAC 1 cut(s) 801
AccII CGCG 1 cut(s) 47
AciI CCGC 3 cut(s) 47, 216, 1017
AclWI GGATC 2 cut(s) 22, 363
AcoI YGGCCR 5 cut(s) 237, 295, 451, 729, 964
AcyI GRCGYC 1 cut(s) 162
AfiI CCNNNNNNNGG 5 cut(s) 11, 157, 235, 262, 973
AgsI TTSAA 3 cut(s) 506, 794, 1097
AjnI CCWGG 3 cut(s) 4, 234, 984
Alw26I GTCTC 2 cut(s) 270, 635
AlwI GGATC 2 cut(s) 22, 363
Ama87I CYCGRG 3 cut(s) 177, 281, 498
ApeKI GCWGC 4 cut(s) 86, 401, 701, 953
AseI ATTAAT 1 cut(s) 830
Asp700I GAANNNNTTC 1 cut(s) 1080
AspLEI GCGC 1 cut(s) 122
AspS9I GGNCC 7 cut(s) 8, 148, 181, 271, 286, 305, 1070
AsuC2I CCSGG 5 cut(s) 12, 178, 179, 220, 958
AsuHPI GGTGA 4 cut(s) 34, 196, 205, 854
AvaI CYCGRG 3 cut(s) 177, 281, 498
AvaII GGWCC 3 cut(s) 8, 181, 305
BaeI ACNNNNGTAYC 2 cut(s) 1104, 1137
BalI TGGCCA 3 cut(s) 453, 731, 966
BanII GRGCYC 1 cut(s) 174
BbvI GCAGC 4 cut(s) 98, 413, 688, 965
BccI CCATC 6 cut(s) 410, 569, 602, 839, 1000, 1061
BceAI ACGGC 4 cut(s) 74, 124, 224, 282
BciT130I CCWGG 3 cut(s) 6, 236, 986
BclI TGATCA 2 cut(s) 820, 1297
BcnI CCSGG 5 cut(s) 12, 178, 179, 220, 958
BcoDI GTCTC 2 cut(s) 270, 635
BfaI CTAG 1 cut(s) 38
BfmI CTRYAG 4 cut(s) 399, 782, 948, 1257
BfoI RGCGCY 1 cut(s) 123
BfuAI ACCTGC 1 cut(s) 1010
BisI GCNGC 5 cut(s) 87, 402, 702, 954, 1017
BlsI GCNGC 5 cut(s) 88, 403, 703, 955, 1018
Bme1390I CCNGG 8 cut(s) 6, 12, 178, 179, 220, 236, 958, 986
Bme18I GGWCC 3 cut(s) 8, 181, 305
BmeT110I CYCGRG 3 cut(s) 177, 281, 498
BmgT120I GGNCC 7 cut(s) 8, 148, 181, 271, 286, 305, 1070
BmiI GGNNCC 7 cut(s) 182, 183, 272, 492, 762, 990, 1015
BmrFI CCNGG 8 cut(s) 6, 12, 178, 179, 220, 236, 958, 986
BmrI ACTGGG 1 cut(s) 759
BmsI GCATC 2 cut(s) 59, 392
BmuI ACTGGG 1 cut(s) 759
BpmI CTGGAG 1 cut(s) 537
BpuMI CCSGG 5 cut(s) 12, 178, 179, 220, 958
BsaBI GATNNNNATC 1 cut(s) 1302
BsaHI GRCGYC 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 270
BsaJI CCNNGG 7 cut(s) 115, 151, 177, 234, 298, 335, 732
BsaWI WCCGGW 1 cut(s) 386
BsaXI ACNNNNNCTCC 4 cut(s) 459, 489, 1125, 1155
Bsc4I CCNNNNNNNGG 5 cut(s) 11, 157, 235, 262, 973
Bse1I ACTGG 2 cut(s) 657, 765
Bse3DI GCAATG 3 cut(s) 804, 877, 1149
Bse8I GATNNNNATC 1 cut(s) 1302
BseBI CCWGG 3 cut(s) 6, 236, 986
BseDI CCNNGG 7 cut(s) 115, 151, 177, 234, 298, 335, 732
BseGI GGATG 4 cut(s) 383, 580, 910, 1072
BseJI GATNNNNATC 1 cut(s) 1302
BseLI CCNNNNNNNGG 5 cut(s) 11, 157, 235, 262, 973
BseMI GCAATG 3 cut(s) 804, 877, 1149
BseMII CTCAG 4 cut(s) 561, 696, 848, 1067
BseNI ACTGG 2 cut(s) 657, 765
BseRI GAGGAG 1 cut(s) 1026
BseX3I CGGCCG 1 cut(s) 295
BseXI GCAGC 4 cut(s) 98, 413, 688, 965
BseYI CCCAGC 1 cut(s) 288
Bsh1236I CGCG 1 cut(s) 47
Bsh1285I CGRYCG 1 cut(s) 298
BsiEI CGRYCG 1 cut(s) 298
BsiHKCI CYCGRG 3 cut(s) 177, 281, 498
BsiSI CCGG 5 cut(s) 11, 178, 219, 387, 957
BslFI GGGAC 3 cut(s) 119, 167, 862
BslI CCNNNNNNNGG 5 cut(s) 11, 157, 235, 262, 973
BsmAI GTCTC 2 cut(s) 270, 635
BsmFI GGGAC 3 cut(s) 119, 167, 862
BsmI GAATGC 1 cut(s) 1144
Bso31I GGTCTC 1 cut(s) 270
BsoBI CYCGRG 3 cut(s) 177, 281, 498
Bsp1286I GDGCHC 1 cut(s) 174
Bsp143I GATC 4 cut(s) 14, 355, 820, 1297
Bsp19I CCATGG 1 cut(s) 115
BspACI CCGC 3 cut(s) 47, 216, 1017
BspCNI CTCAG 4 cut(s) 562, 697, 849, 1066
BspFNI CGCG 1 cut(s) 47
BspHI TCATGA 1 cut(s) 93
BspLI GGNNCC 7 cut(s) 182, 183, 272, 492, 762, 990, 1015
BspMAI CTGCAG 1 cut(s) 403
BspMI ACCTGC 1 cut(s) 1010
BspPI GGATC 2 cut(s) 22, 363
BspTNI GGTCTC 1 cut(s) 270
BsrDI GCAATG 3 cut(s) 804, 877, 1149
BsrI ACTGG 2 cut(s) 657, 765
BssECI CCNNGG 7 cut(s) 115, 151, 177, 234, 298, 335, 732
BssMI GATC 4 cut(s) 14, 355, 820, 1297
BssNI GRCGYC 1 cut(s) 162
BssT1I CCWWGG 4 cut(s) 115, 151, 335, 732
Bst2UI CCWGG 3 cut(s) 6, 236, 986
Bst4CI ACNGT 2 cut(s) 681, 786
Bst6I CTCTTC 1 cut(s) 886
BstACI GRCGYC 1 cut(s) 162
BstC8I GCNNGC 4 cut(s) 131, 257, 455, 555
BstDEI CTNAG 5 cut(s) 531, 570, 705, 857, 1053
BstDSI CCRYGG 2 cut(s) 115, 298
BstF5I GGATG 4 cut(s) 383, 580, 910, 1072
BstFNI CGCG 1 cut(s) 47
BstH2I RGCGCY 1 cut(s) 123
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 4 cut(s) 17, 358, 823, 1300
BstMAI GTCTC 2 cut(s) 270, 635
BstMBI GATC 4 cut(s) 14, 355, 820, 1297
BstMCI CGRYCG 1 cut(s) 298
BstMWI GCNNNNNNNGC 4 cut(s) 117, 126, 454, 867
BstNI CCWGG 3 cut(s) 6, 236, 986
BstNSI RCATGY 3 cut(s) 557, 748, 813
BstSCI CCNGG 8 cut(s) 4, 10, 176, 177, 218, 234, 956, 984
BstSFI CTRYAG 4 cut(s) 399, 782, 948, 1257
BstUI CGCG 1 cut(s) 47
BstV1I GCAGC 4 cut(s) 98, 413, 688, 965
BstXI CCANNNNNNTGG 1 cut(s) 756
BstZI CGGCCG 1 cut(s) 295
BtgI CCRYGG 2 cut(s) 115, 298
BtsCI GGATG 4 cut(s) 383, 580, 910, 1072
BtsIMutI CAGTG 1 cut(s) 791
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 4 cut(s) 131, 257, 455, 555
CciI TCATGA 1 cut(s) 93
CfoI GCGC 1 cut(s) 122
Cfr13I GGNCC 7 cut(s) 8, 148, 181, 271, 286, 305, 1070
Cfr9I CCCGGG 1 cut(s) 177
CseI GACGC 4 cut(s) 23, 170, 199, 859
CviAII CATG 8 cut(s) 73, 94, 116, 478, 554, 745, 810, 1032
DdeI CTNAG 5 cut(s) 531, 570, 705, 857, 1053
DpnI GATC 4 cut(s) 16, 357, 822, 1299
DpnII GATC 4 cut(s) 14, 355, 820, 1297
EaeI YGGCCR 5 cut(s) 237, 295, 451, 729, 964
EagI CGGCCG 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 886
EarI CTCTTC 1 cut(s) 886
EclXI CGGCCG 1 cut(s) 295
Eco130I CCWWGG 4 cut(s) 115, 151, 335, 732
Eco24I GRGCYC 1 cut(s) 174
Eco31I GGTCTC 1 cut(s) 270
Eco47I GGWCC 3 cut(s) 8, 181, 305
Eco52I CGGCCG 1 cut(s) 295
Eco88I CYCGRG 3 cut(s) 177, 281, 498
EcoO109I RGGNCCY 2 cut(s) 181, 305
EcoRII CCWGG 3 cut(s) 4, 234, 984
EcoT14I CCWWGG 4 cut(s) 115, 151, 335, 732
EcoT22I ATGCAT 1 cut(s) 74
EcoT38I GRGCYC 1 cut(s) 174
ErhI CCWWGG 4 cut(s) 115, 151, 335, 732
FaeI CATG 8 cut(s) 76, 97, 119, 481, 557, 748, 813, 1035
FaqI GGGAC 3 cut(s) 119, 167, 862
FatI CATG 8 cut(s) 72, 93, 115, 477, 553, 744, 809, 1031
FbaI TGATCA 2 cut(s) 820, 1297
FblI GTMKAC 1 cut(s) 801
Fnu4HI GCNGC 5 cut(s) 87, 402, 702, 954, 1017
FokI GGATG 4 cut(s) 370, 587, 917, 1079
FriOI GRGCYC 1 cut(s) 174
Fsp4HI GCNGC 5 cut(s) 87, 402, 702, 954, 1017
FspBI CTAG 1 cut(s) 38
GlaI GCGC 1 cut(s) 121
GluI GCNGC 5 cut(s) 87, 402, 702, 954, 1017
GsaI CCCAGC 1 cut(s) 292
GsuI CTGGAG 1 cut(s) 537
HaeII RGCGCY 1 cut(s) 123
HapII CCGG 5 cut(s) 11, 178, 219, 387, 957
HgaI GACGC 4 cut(s) 23, 170, 199, 859
HhaI GCGC 1 cut(s) 122
Hin1I GRCGYC 1 cut(s) 162
Hin1II CATG 8 cut(s) 76, 97, 119, 481, 557, 748, 813, 1035
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
HindIII AAGCTT 1 cut(s) 931
HinfI GANTC 4 cut(s) 632, 656, 1042, 1253
HpaII CCGG 5 cut(s) 11, 178, 219, 387, 957
HphI GGTGA 4 cut(s) 34, 196, 205, 854
Hpy166II GTNNAC 3 cut(s) 43, 160, 802
Hpy188I TCNGA 5 cut(s) 66, 250, 315, 1000, 1047
Hpy188III TCNNGA 5 cut(s) 94, 197, 498, 674, 818
Hpy8I GTNNAC 3 cut(s) 43, 160, 802
HpyAV CCTTC 7 cut(s) 195, 245, 318, 504, 1091, 1100, 1197
HpyCH4III ACNGT 2 cut(s) 681, 786
HpyCH4V TGCA 8 cut(s) 72, 377, 383, 401, 539, 563, 809, 1144
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 126, 454, 867
HpyF3I CTNAG 5 cut(s) 531, 570, 705, 857, 1053
Hsp92I GRCGYC 1 cut(s) 162
Hsp92II CATG 8 cut(s) 76, 97, 119, 481, 557, 748, 813, 1035
HspAI GCGC 1 cut(s) 120
KflI GGGWCCC 1 cut(s) 181
Ksp22I TGATCA 2 cut(s) 820, 1297
Kzo9I GATC 4 cut(s) 14, 355, 820, 1297
LmnI GCTCC 3 cut(s) 867, 1013, 1226
Lsp1109I GCAGC 4 cut(s) 98, 413, 688, 965
LweI GCATC 2 cut(s) 59, 392
MaeI CTAG 1 cut(s) 38
MaeIII GTNAC 3 cut(s) 211, 241, 343
MalI GATC 4 cut(s) 16, 357, 822, 1299
MboI GATC 4 cut(s) 14, 355, 820, 1297
MboII GAAGA 3 cut(s) 37, 903, 1298
MhlI GDGCHC 1 cut(s) 174
MlsI TGGCCA 3 cut(s) 453, 731, 966
MluCI AATT 4 cut(s) 831, 978, 1242, 1314
MluNI TGGCCA 3 cut(s) 453, 731, 966
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 1 cut(s) 1019
Mox20I TGGCCA 3 cut(s) 453, 731, 966
Mph1103I ATGCAT 1 cut(s) 74
MroXI GAANNNNTTC 1 cut(s) 1080
MscI TGGCCA 3 cut(s) 453, 731, 966
MseI TTAA 4 cut(s) 143, 627, 830, 1313
Msp20I TGGCCA 3 cut(s) 453, 731, 966
MspI CCGG 5 cut(s) 11, 178, 219, 387, 957
MspR9I CCNGG 8 cut(s) 6, 12, 178, 179, 220, 236, 958, 986
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 3 cut(s) 6, 236, 986
MvnI CGCG 1 cut(s) 47
MwoI GCNNNNNNNGC 4 cut(s) 117, 126, 454, 867
NciI CCSGG 5 cut(s) 12, 178, 179, 220, 958
NcoI CCATGG 1 cut(s) 115
NdeII GATC 4 cut(s) 14, 355, 820, 1297
NlaIII CATG 8 cut(s) 76, 97, 119, 481, 557, 748, 813, 1035
NlaIV GGNNCC 7 cut(s) 182, 183, 272, 492, 762, 990, 1015
NmeAIII GCCGAG 2 cut(s) 273, 299
NmuCI GTSAC 2 cut(s) 211, 241
NsiI ATGCAT 1 cut(s) 74
NspI RCATGY 3 cut(s) 557, 748, 813
PaeI GCATGC 1 cut(s) 557
PaeR7I CTCGAG 1 cut(s) 281
PagI TCATGA 1 cut(s) 93
PaqCI CACCTGC 1 cut(s) 1010
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 1 cut(s) 1080
PfeI GAWTC 3 cut(s) 632, 656, 1042
PflMI CCANNNNNTGG 2 cut(s) 235, 973
PkrI GCNGC 5 cut(s) 88, 403, 703, 955, 1018
PleI GAGTC 1 cut(s) 1247
PpsI GAGTC 1 cut(s) 1247
PpuMI RGGWCCY 2 cut(s) 181, 305
PshBI ATTAAT 1 cut(s) 830
Psp5II RGGWCCY 2 cut(s) 181, 305
Psp6I CCWGG 3 cut(s) 4, 234, 984
PspFI CCCAGC 1 cut(s) 288
PspGI CCWGG 3 cut(s) 4, 234, 984
PspN4I GGNNCC 7 cut(s) 182, 183, 272, 492, 762, 990, 1015
PspPI GGNCC 7 cut(s) 8, 148, 181, 271, 286, 305, 1070
PspPPI RGGWCCY 2 cut(s) 181, 305
PspXI VCTCGAGB 1 cut(s) 281
PstI CTGCAG 1 cut(s) 403
SaqAI TTAA 4 cut(s) 143, 627, 830, 1313
SatI GCNGC 5 cut(s) 87, 402, 702, 954, 1017
Sau3AI GATC 4 cut(s) 14, 355, 820, 1297
Sau96I GGNCC 7 cut(s) 8, 148, 181, 271, 286, 305, 1070
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 8 cut(s) 6, 12, 178, 179, 220, 236, 958, 986
SduI GDGCHC 1 cut(s) 174
SfaNI GCATC 2 cut(s) 59, 392
SfcI CTRYAG 4 cut(s) 399, 782, 948, 1257
Sfr274I CTCGAG 1 cut(s) 281
SinI GGWCC 3 cut(s) 8, 181, 305
SlaI CTCGAG 1 cut(s) 281
SmaI CCCGGG 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 281
SmoI CTYRAG 1 cut(s) 281
SphI GCATGC 1 cut(s) 557
Sse9I AATT 4 cut(s) 831, 978, 1242, 1314
SsiI CCGC 3 cut(s) 47, 216, 1017
SspI AATATT 1 cut(s) 1081
SspMI CTAG 1 cut(s) 38
StyD4I CCNGG 8 cut(s) 4, 10, 176, 177, 218, 234, 956, 984
StyI CCWWGG 4 cut(s) 115, 151, 335, 732
TaaI ACNGT 2 cut(s) 681, 786
TaqI TCGA 2 cut(s) 282, 683
TasI AATT 4 cut(s) 831, 978, 1242, 1314
TauI GCSGC 1 cut(s) 1019
TfiI GAWTC 3 cut(s) 632, 656, 1042
Tru1I TTAA 4 cut(s) 143, 627, 830, 1313
Tru9I TTAA 4 cut(s) 143, 627, 830, 1313
TscAI CASTG 1 cut(s) 791
TseFI GTSAC 2 cut(s) 211, 241
TseI GCWGC 4 cut(s) 86, 401, 701, 953
Tsp45I GTSAC 2 cut(s) 211, 241
TspDTI ATGAA 4 cut(s) 345, 678, 816, 1245
TspGWI ACGGA 1 cut(s) 926
TspMI CCCGGG 1 cut(s) 177
TspRI CASTG 1 cut(s) 791
Van91I CCANNNNNTGG 2 cut(s) 235, 973
VpaK11BI GGWCC 3 cut(s) 8, 181, 305
VspI ATTAAT 1 cut(s) 830
XceI RCATGY 3 cut(s) 557, 748, 813
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 296
XhoI CTCGAG 1 cut(s) 281
XmaI CCCGGG 1 cut(s) 177
XmiI GTMKAC 1 cut(s) 801
XmnI GAANNNNTTC 1 cut(s) 1080
XspI CTAG 1 cut(s) 38
Zsp2I ATGCAT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.