Rorug02G0146900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0017223
Physical Location & Seq
Reverse (-)
12908267 .. 12917910
9644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0146900.1

Sequence Viewer

Length: 3654 bp
ATGGCTCGAATGATGATCACTCGAAAAACAGTATCAGCAGTAGCACTTATAGGATGGACAGTGTTCATTAGCCTCCTTATGATGAGTGAAGTTGTGAGTGCAGAAAGGCCCCTAAAAGATGAGCAGAAGCCAAGAAATTTTGTTGAAGAAGATGTAAAGCAAGGAGTCTTTGTGAGAATGATGAAGCTTCTCTGGCAGACTGGAGGGTCTTCTTATCAACCTGTTTGGCCTGAGATGAAGTTTGGTTGGAAAATTGTAGTGGGAACAATAGTTGGGTTCTTTGGTGCTGCATTGGGTAGTGTTGGAGGTGTTGGTGGTGGAGGAATTTTTGTTCCGATGCTCGCGTTGATCGTTGGTTTCGATCCCAAGTCTTCCACCGCCATTTCCAAGTGTATGATAATGGGAGCTGCAGGCTCAACAGTGTACTTCAATTTGAGACTTAGGCACCCAACACTGGACATGCCCCTTATAGATTATGATCTGGCTTTGCTCTTTCAGCCAATGCTTATGCTAGGAATCAGCATTGGAGTTGCCTTCAACGTCATGTTTGCCGATTGGATGGTCACAGTTCTACTCATCATTCTTTTCTTTGGGACAGCAGCAAAAGCTTTAATGAAAGGCATACAAACATGGAAGAAAGAAACAATGATGAAGAAGGAAGCCGAAAAGCAGTTGGAATCGGAGTCCAAACCCGGTGATGGTTCTGGAGAAGACTACAAACCATTACCTAGTGGTCCAGTTTCATTGCAAGATGACGAAGTACCTATCTCGCGCAACGTTTACTGGAAAGAGTTGTTATTGCTTGTGTTTGTGTGGGTGGCTTTCCTTATTGTTCAGATTGTCAAGACATATACCGAGACTTGCTCCACCATGTTCTGGGTCCTGAATTCCTTGCAGGTACCAATTGCTGCCTCAGTAACAGTTTTTGAAGCGATATGCTTGTGGAAAGGCACCAGGGTAATTGCATCAAAAGGAAAGGAAATCACAAACTGGAAGTTGCATCAGCTATTTCTTTACTGCAGCTGTGGGATTGTAGCTGGTATGGTTGGTGGACTACTTGGCCTCGGAGGCGGTTTCATCTTGGGACCCCTATTTCTTGAACTTGGAATTCCTCCTCAGGTAGCAAGTGCCACATCAACCTTTGCTATGCTATTCTCATCCTCCATGTCAGTTGTACAATATTACCTTCTCAACCGTTTCCCAGTTCCATATGCTGCTTATTTTGTTTTGGTTGCTACAATTGCTGCCTTCACTGGTCAACATGTCGTGAGAAAGATCATTGCAGTGCTCGGAAGAGCCTCCATTGTCATCTTCATACTAGCTATGACGATTTTCGTCAGCGCAATCAGCTTAGGGGGGGTCGGAATAGCAAACATGGTTGAGAAGATGGAGAATCAAGAGTTGGAGCCCCATCCTCTCCTACTCCTAGTGGCTAGTCCTAGTGGTGGCCGGGGCCTTTGTGCTTATTGCCTGTTGGTTTTTGAAATGGCGACGAAGGCCGAGCCGTCGGCGGAGTCTCCGACTTCGGTTCTCAAGGAAGAGGATGTATGTGGGGAGATTGATGTCAAATTAGAGAAGGAGGAGGAGAAGCTCCTCGAAGCTCGGGTTGAGGAAGAGGAGGCAGAAACAGAAAAGGAGCCGCCCCACTTGAATGACACTCAGTTTAGCAAGTTGGATGAGCTTCTAACAAAGACTCAGCTTTACTCGGATTTTTTGCTCGAGAAAATGGATGACATCACACTTGATGTTCCCGAGCAGCCGTGTGAACCTGTTGAGAAAAAGAGAGGCCGTGGTTTCAAAAGAAAGGCTGCTTACAATGATACAAAGGCCAAGAGGGCAGTTGCAGCTATGCTTACAAGATCTAAAGAGGGTGAGAAAATTGAAGATGTGAACCTAACCGAGGAAGAAAGAGTTGAGAAACAGCAAAAGGAACTTGTACCTCTACTGACTGGTGGAAAATTGAAGTCTTATCAACTCAAAGGTGTAAAGTGGTTGATCTCTTTATGGCAAAATGGGCTGAATGGGATCCTTGCAGACCAAATGGGACTTGGAAAGACTATCCAAACCATAGGTTTTCTTTCTCATCTTAAATCTATGGGACTGGATGGGCCCTACTTGGTGATTGCACCTCTTTCTACTCTTTCCAACTGGATTAATGAAATTTCAAGGTTTACACCTTCAATGAAGGCTATAATCTATCATGGTAACAAGAAAGAAAGGGATGACATACGAAGGAAGCACATGCCCAAATCAGTTGGCCCTAACTTCCCAATAATTGTTACCTCATATGAAGTTGCGTTGGCTGATGCAAGAAAATGTTTAAGGCACTACAACTGGAAATATCTTGTGGTTGATGAAGGACACAGATTGAAAAACTCCAAGTGCAAATTAGTGCAGCAGTTGAAGTACATACCTGTAGAGAATAAGATTCTGTTGACTGGAACACCTCTGCAGAATAATTTGGCTGAGCTTTGGTCATTGTTGAACTTTATTTTGCCGGATATATTCTCATCCCATGAAGAATTTGAGTCATGGTTTGACCTAGGAGGAAAGTGCAATAGTGAAGCAATGAAGGAAGAATTGGAAGAGAAGAGAAGGGCTCAAGTGCTACCGAAACTCCATGCCATACTGCGTCCCTTTCTTCTCCGAAGAATGAAGATAGATGTTGAGCTGATGCTTCCTAGGAAAAAGGAAATCATATTATATGCAACCATGACAGAGCATCAAAAGAAGTTTCAGGAACATCTGATCAATAAGACACTGGAGAAACATCTAATACTTGAAAATGGAAGCCATGTAAATGGCCTGAAAGGGAAGCTTAACAATTTGATGATCCAACTTCGGAAGAACTGCAATCATCCTGACCTTTTAGAGTCAGCATTTGATGGATCATATTTCTACCCACCTGTTGACCAGATAGTTGAGCAGTGTGGGAAATTTAGCTTGCTTGAACGACTGTTGAAGCGGCTGCTTGCCTGCAAACACAAGGTTCTGATATTCTCGCAGTGGACTAAGATTTTGGATATAATGGATTACTATTTTAGCGAAAAAGGATTTGAAGTTTGTAGAATCGATGGCAATGTGAAACTAGATGAGCGGAGAAGACAGATTGCTTCTTTCAATGATTTAGACAGCACTTGTAGAATATTCCTTCTGAGCACAAGAGCTGGTGGACTGGGTATCAACCTTACTGCAGCTGATACTTGTATACTGTATGACAGTGATTGGAACCCTCAAATGGATTTGCAAGCCATGGATAGATGTCACAGGATTGGGCAAACCAAGCCGGTTCATGTTTACCGGTTGGCAACAGCACAATCTGTAGAGGGTCGGATGTTGAAAAGAGCTTTTAGTAAGTTGAAGCTTGAACATGTAGTCATTGGAAAAGGGAAGTTCCATCAGGAAAGAGCCAAGCCTGAGGCAGAATTCTTGGAGGAAGAGGATCTCATAGCAGTTCTCCGAGAAGAAGAATCTGCTGAGGACAAAATGATACAGACAGAAATCAGTGACGAAGAACTGGAGAAGGTCTTGGATCGCAGTGATCTCGTGGGGACTCCTACTGATGCTGCTGTTGCACTTCCCCTAAAGGGGCCTGGCTGGGAAGTGGTGGTTCCTACCGCTGGTGGGGGCATGCTCTCCACCCTTAATAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

1217

Amino Acids

136.51

Weight (kDa)

6.91

Isoelectric Point (pI)

37.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 90 - 206 5e-10 Sulfite exporter TauE/SafE
TauE PF01925 341 - 448 3e-14 Sulfite exporter TauE/SafE
ResIII PF04851 653 - 816 2.8e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 657 - 956 4.2e-81 SNF2-related domain
DEAD PF00270 671 - 819 7.7e-06 DEAD/DEAH box helicase
Helicase_C PF00271 979 - 1092 3.3e-26 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017223)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17480 FvH4_1g17480 FvH4_1g17480
rosa_chinensis RchiOBHm_Chr2g0107701
rosa_laevigata RLG00000017598
rosa_roxburghii Rroxscaffold_2G00136020
rosa_rugosa Rorug02G0146900 Rorug02G0147000
rosa_samantha Rh2AG196500 Rh2BG209200 Rh2CG201400 Rh2DG204400
rosa_wichuraiana Rw2G015530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 886
Acc65I GGTACC 1 cut(s) 898
AccB1I GGYRCC 3 cut(s) 444, 898, 950
AccB7I CCANNNNNTGG 1 cut(s) 876
AccBSI CCGCTC 1 cut(s) 3097
AccI GTMKAC 1 cut(s) 3208
AccII CGCG 2 cut(s) 344, 772
AciI CCGC 7 cut(s) 378, 1071, 1511, 1640, 2965, 3097, 3618
AclI AACGTT 1 cut(s) 777
AclWI GGATC 7 cut(s) 356, 2020, 2033, 2827, 2896, 3450, 3540
AcoI YGGCCR 1 cut(s) 1447
AcsI RAATTY 8 cut(s) 136, 324, 886, 1107, 2160, 2522, 2936, 3425
AfaI GTAC 6 cut(s) 425, 762, 900, 1176, 1938, 2408
AflIII ACRYGT 2 cut(s) 1261, 3370
AgeI ACCGGT 1 cut(s) 3300
AjnI CCWGG 2 cut(s) 953, 3592
AjuI GAANNNNNNNTTGG 4 cut(s) 1385, 1417, 2564, 2596
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
Alw21I GWGCWC 2 cut(s) 1290, 3161
Alw26I GTCTC 3 cut(s) 430, 851, 1521
AlwI GGATC 7 cut(s) 356, 2020, 2033, 2827, 2896, 3450, 3540
Ama87I CYCGRG 3 cut(s) 1602, 1718, 1751
ApaI GGGCCC 1 cut(s) 2112
ApoI RAATTY 8 cut(s) 136, 324, 886, 1107, 2160, 2522, 2936, 3425
ArsI GACNNNNNNTTYG 2 cut(s) 3001, 3033
AseI ATTAAT 1 cut(s) 2154
AsiGI ACCGGT 1 cut(s) 3300
Asp718I GGTACC 1 cut(s) 898
AspA2I CCTAGG 2 cut(s) 2542, 2681
AspLEI GCGC 2 cut(s) 774, 1343
AspS9I GGNCC 9 cut(s) 108, 734, 880, 1085, 1453, 2108, 2109, 2258, 3590
AsuC2I CCSGG 2 cut(s) 693, 1451
AsuHPI GGTGA 3 cut(s) 707, 1883, 2131
AvaI CYCGRG 3 cut(s) 1602, 1718, 1751
AvaII GGWCC 3 cut(s) 734, 880, 1085
AvrII CCTAGG 2 cut(s) 2542, 2681
AxyI CCTNAGG 2 cut(s) 1116, 3417
BaeGI GKGCMC 1 cut(s) 2112
BamHI GGATCC 1 cut(s) 2025
BanI GGYRCC 3 cut(s) 444, 898, 950
BanII GRGCYC 3 cut(s) 1410, 2112, 2602
BauI CACGAG 1 cut(s) 3545
BbsI GAAGAC 4 cut(s) 201, 363, 717, 3109
Bbv12I GWGCWC 2 cut(s) 1290, 3161
BbvCI CCTCAGC 1 cut(s) 3477
BccI CCATC 9 cut(s) 48, 553, 692, 1381, 1419, 2099, 2879, 3068, 3405
BceAI ACGGC 3 cut(s) 1489, 1744, 1773
BcgI CGANNNNNNTGC 2 cut(s) 3526, 3560
BciT130I CCWGG 2 cut(s) 955, 3594
BclI TGATCA 2 cut(s) 15, 2748
BcnI CCSGG 2 cut(s) 693, 1451
BcoDI GTCTC 3 cut(s) 430, 851, 1521
BfaI CTAG 9 cut(s) 512, 729, 1319, 1427, 1434, 1440, 2543, 2682, 3089
BfmI CTRYAG 6 cut(s) 408, 1018, 2415, 2450, 3192, 3321
BfuAI ACCTGC 1 cut(s) 886
BglI GCCNNNNNGGC 2 cut(s) 1068, 1835
BglII AGATCT 1 cut(s) 1859
BlnI CCTAGG 2 cut(s) 2542, 2681
BlpI GCTNAGC 1 cut(s) 2466
Bme1390I CCNGG 4 cut(s) 693, 955, 1451, 3594
Bme18I GGWCC 3 cut(s) 734, 880, 1085
BmeT110I CYCGRG 3 cut(s) 1602, 1718, 1751
BmgT120I GGNCC 9 cut(s) 108, 734, 880, 1085, 1453, 2108, 2109, 2258, 3590
BmrFI CCNGG 4 cut(s) 693, 955, 1451, 3594
BmrI ACTGGG 2 cut(s) 1196, 3185
BmsI GCATC 7 cut(s) 327, 974, 1009, 2296, 2664, 2731, 3553
BmuI ACTGGG 2 cut(s) 1196, 3185
BpiI GAAGAC 4 cut(s) 201, 363, 717, 3109
BplI GAGNNNNNCTC 4 cut(s) 848, 880, 2584, 2616
BpmI CTGGAG 4 cut(s) 222, 726, 2783, 3539
Bpu10I CCTNAGC 2 cut(s) 1351, 3477
Bpu1102I GCTNAGC 1 cut(s) 2466
BpuEI CTTGAG 2 cut(s) 1517, 2586
BpuMI CCSGG 2 cut(s) 693, 1451
Bsa29I ATCGAT 1 cut(s) 3072
BsaBI GATNNNNATC 1 cut(s) 477
BsaJI CCNNGG 8 cut(s) 954, 1063, 1450, 1789, 1899, 2542, 2681, 3252
BsaWI WCCGGW 1 cut(s) 3300
BsaXI ACNNNNNCTCC 4 cut(s) 156, 186, 2601, 2631
Bse118I RCCGGY 2 cut(s) 3286, 3300
Bse21I CCTNAGG 2 cut(s) 1116, 3417
Bse3DI GCAATG 4 cut(s) 743, 1278, 2574, 3085
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 2 cut(s) 955, 3594
BseCI ATCGAT 1 cut(s) 3072
BseDI CCNNGG 8 cut(s) 954, 1063, 1450, 1789, 1899, 2542, 2681, 3252
BseJI GATNNNNATC 1 cut(s) 477
BseMI GCAATG 4 cut(s) 743, 1278, 2574, 3085
BseMII CTCAG 9 cut(s) 222, 927, 1130, 1673, 1709, 2457, 3146, 3408, 3468
BseRI GAGGAG 5 cut(s) 1104, 1583, 1595, 1598, 1631
BseSI GKGCMC 1 cut(s) 2112
BseYI CCCAGC 1 cut(s) 3597
BsgI GTGCAG 2 cut(s) 120, 2414
Bsh1236I CGCG 2 cut(s) 344, 772
BshNI GGYRCC 3 cut(s) 444, 898, 950
BshTI ACCGGT 1 cut(s) 3300
BshVI ATCGAT 1 cut(s) 3072
BsiHKAI GWGCWC 2 cut(s) 1290, 3161
BsiHKCI CYCGRG 3 cut(s) 1602, 1718, 1751
BsiSI CCGG 5 cut(s) 693, 1450, 2498, 3287, 3301
BslFI GGGAC 6 cut(s) 607, 1098, 2058, 2112, 2619, 3565
BsmAI GTCTC 3 cut(s) 430, 851, 1521
BsmFI GGGAC 6 cut(s) 607, 1098, 2058, 2112, 2619, 3565
BsoBI CYCGRG 3 cut(s) 1602, 1718, 1751
Bsp120I GGGCCC 1 cut(s) 2108
Bsp1286I GDGCHC 5 cut(s) 1290, 1410, 2112, 2602, 3161
Bsp1407I TGTACA 1 cut(s) 1174
Bsp1720I GCTNAGC 1 cut(s) 2466
Bsp19I CCATGG 1 cut(s) 3252
BspACI CCGC 7 cut(s) 378, 1071, 1511, 1640, 2965, 3097, 3618
BspCNI CTCAG 9 cut(s) 223, 926, 1129, 1672, 1708, 2458, 3147, 3409, 3469
BspDI ATCGAT 1 cut(s) 3072
BspFNI CGCG 2 cut(s) 344, 772
BspMAI CTGCAG 4 cut(s) 412, 1022, 2454, 3196
BspMI ACCTGC 1 cut(s) 886
BspPI GGATC 7 cut(s) 356, 2020, 2033, 2827, 2896, 3450, 3540
BspQI GCTCTTC 1 cut(s) 1288
BspT107I GGYRCC 3 cut(s) 444, 898, 950
BsrBI CCGCTC 1 cut(s) 3097
BsrDI GCAATG 4 cut(s) 743, 1278, 2574, 3085
BsrFI RCCGGY 2 cut(s) 3286, 3300
BsrGI TGTACA 1 cut(s) 1174
BssAI RCCGGY 2 cut(s) 3286, 3300
BssECI CCNNGG 8 cut(s) 954, 1063, 1450, 1789, 1899, 2542, 2681, 3252
BssNAI GTATAC 1 cut(s) 3209
BssSI CACGAG 1 cut(s) 3545
BssT1I CCWWGG 3 cut(s) 2542, 2681, 3252
Bst1107I GTATAC 1 cut(s) 3209
Bst2BI CACGAG 1 cut(s) 3545
Bst2UI CCWGG 2 cut(s) 955, 3594
Bst4CI ACNGT 9 cut(s) 31, 61, 421, 568, 922, 1196, 2958, 3213, 3221
Bst6I CTCTTC 6 cut(s) 1288, 1533, 1608, 2580, 2585, 3432
BstAUI TGTACA 1 cut(s) 1174
BstC8I GCNNGC 7 cut(s) 342, 412, 2945, 2973, 2977, 3249, 3632
BstDSI CCRYGG 2 cut(s) 1789, 3252
BstENI CCTNNNNNAGG 1 cut(s) 1898
BstFNI CGCG 2 cut(s) 344, 772
BstHHI GCGC 2 cut(s) 774, 1343
BstMAI GTCTC 3 cut(s) 430, 851, 1521
BstNI CCWGG 2 cut(s) 955, 3594
BstNSI RCATGY 5 cut(s) 463, 1265, 2245, 3374, 3634
BstSCI CCNGG 4 cut(s) 691, 953, 1449, 3592
BstSFI CTRYAG 6 cut(s) 408, 1018, 2415, 2450, 3192, 3321
BstSLI GKGCMC 1 cut(s) 2112
BstUI CGCG 2 cut(s) 344, 772
BstV2I GAAGAC 4 cut(s) 201, 363, 717, 3109
BstX2I RGATCY 3 cut(s) 1859, 2025, 3442
BstXI CCANNNNNNTGG 1 cut(s) 2801
BstYI RGATCY 3 cut(s) 1859, 2025, 3442
BstZ17I GTATAC 1 cut(s) 3209
Bsu15I ATCGAT 1 cut(s) 3072
Bsu36I CCTNAGG 2 cut(s) 1116, 3417
BsuTUI ATCGAT 1 cut(s) 3072
BtgI CCRYGG 2 cut(s) 1789, 3252
BtsI GCAGTG 4 cut(s) 1290, 2933, 3011, 3544
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 7 cut(s) 342, 412, 2945, 2973, 2977, 3249, 3632
CfoI GCGC 2 cut(s) 774, 1343
Cfr10I RCCGGY 2 cut(s) 3286, 3300
Cfr13I GGNCC 9 cut(s) 108, 734, 880, 1085, 1453, 2108, 2109, 2258, 3590
ClaI ATCGAT 1 cut(s) 3072
CseI GACGC 1 cut(s) 2621
Csp6I GTAC 6 cut(s) 424, 761, 899, 1175, 1937, 2407
CspAI ACCGGT 1 cut(s) 3300
CviQI GTAC 6 cut(s) 424, 761, 899, 1175, 1937, 2407
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 1447
Eam1104I CTCTTC 6 cut(s) 1288, 1533, 1608, 2580, 2585, 3432
EarI CTCTTC 6 cut(s) 1288, 1533, 1608, 2580, 2585, 3432
EciI GGCGGA 1 cut(s) 1526
Eco130I CCWWGG 3 cut(s) 2542, 2681, 3252
Eco24I GRGCYC 3 cut(s) 1410, 2112, 2602
Eco47I GGWCC 3 cut(s) 734, 880, 1085
Eco81I CCTNAGG 2 cut(s) 1116, 3417
Eco88I CYCGRG 3 cut(s) 1602, 1718, 1751
EcoNI CCTNNNNNAGG 1 cut(s) 1898
EcoO109I RGGNCCY 6 cut(s) 108, 880, 1085, 1453, 2109, 3590
EcoRI GAATTC 3 cut(s) 886, 1107, 3425
EcoRII CCWGG 2 cut(s) 953, 3592
EcoT14I CCWWGG 3 cut(s) 2542, 2681, 3252
EcoT38I GRGCYC 3 cut(s) 1410, 2112, 2602
ErhI CCWWGG 3 cut(s) 2542, 2681, 3252
FalI AAGNNNNNCTT 2 cut(s) 2802, 2834
FaqI GGGAC 6 cut(s) 607, 1098, 2058, 2112, 2619, 3565
FauNDI CATATG 2 cut(s) 1210, 2287
FbaI TGATCA 2 cut(s) 15, 2748
FblI GTMKAC 1 cut(s) 3208
FriOI GRGCYC 3 cut(s) 1410, 2112, 2602
FspBI CTAG 9 cut(s) 512, 729, 1319, 1427, 1434, 1440, 2543, 2682, 3089
GlaI GCGC 2 cut(s) 773, 1342
GsaI CCCAGC 1 cut(s) 3601
GsuI CTGGAG 4 cut(s) 222, 726, 2783, 3539
HapII CCGG 5 cut(s) 693, 1450, 2498, 3287, 3301
HgaI GACGC 1 cut(s) 2621
HhaI GCGC 2 cut(s) 774, 1343
Hin6I GCGC 2 cut(s) 772, 1341
HinP1I GCGC 2 cut(s) 772, 1341
HincII GTYRAC 3 cut(s) 1259, 2436, 2911
HindII GTYRAC 3 cut(s) 1259, 2436, 2911
HindIII AAGCTT 4 cut(s) 185, 606, 2816, 3362
HpaII CCGG 5 cut(s) 693, 1450, 2498, 3287, 3301
HphI GGTGA 3 cut(s) 707, 1883, 2131
Hpy99I CGWCG 2 cut(s) 1495, 1510
HpyCH4III ACNGT 9 cut(s) 31, 61, 421, 568, 922, 1196, 2958, 3213, 3221
HpyCH4IV ACGT 2 cut(s) 540, 777
HpySE526I ACGT 2 cut(s) 540, 777
HspAI GCGC 2 cut(s) 772, 1341
KflI GGGWCCC 1 cut(s) 1085
KpnI GGTACC 1 cut(s) 902
Ksp22I TGATCA 2 cut(s) 15, 2748
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 5 cut(s) 404, 869, 1405, 1596, 1636
LweI GCATC 7 cut(s) 327, 974, 1009, 2296, 2664, 2731, 3553
MaeI CTAG 9 cut(s) 512, 729, 1319, 1427, 1434, 1440, 2543, 2682, 3089
MaeII ACGT 2 cut(s) 540, 777
MaeIII GTNAC 6 cut(s) 562, 916, 2204, 2278, 3263, 3506
MbiI CCGCTC 1 cut(s) 3097
MfeI CAATTG 2 cut(s) 903, 1239
MflI RGATCY 3 cut(s) 1859, 2025, 3442
MhlI GDGCHC 5 cut(s) 1290, 1410, 2112, 2602, 3161
MlyI GAGTC 7 cut(s) 174, 692, 1523, 1687, 2537, 2882, 3547
MseI TTAA 6 cut(s) 611, 2088, 2154, 2321, 2820, 3645
MslI CAYNNNNRTG 3 cut(s) 1283, 1650, 2799
MspA1I CMGCKG 3 cut(s) 1023, 3197, 3620
MspI CCGG 5 cut(s) 693, 1450, 2498, 3287, 3301
MspR9I CCNGG 4 cut(s) 693, 955, 1451, 3594
MunI CAATTG 2 cut(s) 903, 1239
MvaI CCWGG 2 cut(s) 955, 3594
MvnI CGCG 2 cut(s) 344, 772
NciI CCSGG 2 cut(s) 693, 1451
NcoI CCATGG 1 cut(s) 3252
NdeI CATATG 2 cut(s) 1210, 2287
NmeAIII GCCGAG 1 cut(s) 1525
NmuCI GTSAC 3 cut(s) 562, 3263, 3506
NspI RCATGY 5 cut(s) 463, 1265, 2245, 3374, 3634
PaeI GCATGC 1 cut(s) 3634
PaeR7I CTCGAG 1 cut(s) 1718
PciI ACATGT 2 cut(s) 1261, 3370
PciSI GCTCTTC 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 357
PfeI GAWTC 6 cut(s) 516, 677, 1393, 2428, 3069, 3470
PflMI CCANNNNNTGG 1 cut(s) 876
PinAI ACCGGT 1 cut(s) 3300
PleI GAGTC 7 cut(s) 173, 691, 1522, 1687, 2536, 2881, 3547
PpsI GAGTC 7 cut(s) 173, 691, 1522, 1687, 2536, 2881, 3547
PpuMI RGGWCCY 2 cut(s) 880, 1085
PscI ACATGT 2 cut(s) 1261, 3370
PshBI ATTAAT 1 cut(s) 2154
Psp1406I AACGTT 1 cut(s) 777
Psp5II RGGWCCY 2 cut(s) 880, 1085
Psp6I CCWGG 2 cut(s) 953, 3592
PspFI CCCAGC 1 cut(s) 3597
PspGI CCWGG 2 cut(s) 953, 3592
PspOMI GGGCCC 1 cut(s) 2108
PspPI GGNCC 9 cut(s) 108, 734, 880, 1085, 1453, 2108, 2109, 2258, 3590
PspPPI RGGWCCY 2 cut(s) 880, 1085
PstI CTGCAG 4 cut(s) 412, 1022, 2454, 3196
PsuI RGATCY 3 cut(s) 1859, 2025, 3442
PvuII CAGCTG 2 cut(s) 1023, 3197
RsaI GTAC 6 cut(s) 425, 762, 900, 1176, 1938, 2408
RsaNI GTAC 6 cut(s) 424, 761, 899, 1175, 1937, 2407
RseI CAYNNNNRTG 3 cut(s) 1283, 1650, 2799
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 6 cut(s) 611, 2088, 2154, 2321, 2820, 3645
Sau96I GGNCC 9 cut(s) 108, 734, 880, 1085, 1453, 2108, 2109, 2258, 3590
SchI GAGTC 7 cut(s) 174, 692, 1523, 1687, 2537, 2882, 3547
ScrFI CCNGG 4 cut(s) 693, 955, 1451, 3594
SduI GDGCHC 5 cut(s) 1290, 1410, 2112, 2602, 3161
SfaNI GCATC 7 cut(s) 327, 974, 1009, 2296, 2664, 2731, 3553
SfcI CTRYAG 6 cut(s) 408, 1018, 2415, 2450, 3192, 3321
Sfr274I CTCGAG 1 cut(s) 1718
SinI GGWCC 3 cut(s) 734, 880, 1085
SlaI CTCGAG 1 cut(s) 1718
SmiMI CAYNNNNRTG 3 cut(s) 1283, 1650, 2799
SmlI CTYRAG 3 cut(s) 1532, 1718, 2601
SmoI CTYRAG 3 cut(s) 1532, 1718, 2601
SphI GCATGC 1 cut(s) 3634
SsiI CCGC 7 cut(s) 378, 1071, 1511, 1640, 2965, 3097, 3618
SspI AATATT 2 cut(s) 1181, 3147
SspMI CTAG 9 cut(s) 512, 729, 1319, 1427, 1434, 1440, 2543, 2682, 3089
StyD4I CCNGG 4 cut(s) 691, 953, 1449, 3592
StyI CCWWGG 3 cut(s) 2542, 2681, 3252
TaaI ACNGT 9 cut(s) 31, 61, 421, 568, 922, 1196, 2958, 3213, 3221
TaiI ACGT 2 cut(s) 543, 780
TaqI TCGA 6 cut(s) 7, 22, 360, 1596, 1719, 3072
TatI WGTACW 3 cut(s) 423, 1174, 2406
TauI GCSGC 2 cut(s) 1642, 2968
TfiI GAWTC 6 cut(s) 516, 677, 1393, 2428, 3069, 3470
Tru1I TTAA 6 cut(s) 611, 2088, 2154, 2321, 2820, 3645
Tru9I TTAA 6 cut(s) 611, 2088, 2154, 2321, 2820, 3645
TseFI GTSAC 3 cut(s) 562, 3263, 3506
Tsp45I GTSAC 3 cut(s) 562, 3263, 3506
Van91I CCANNNNNTGG 1 cut(s) 876
VpaK11BI GGWCC 3 cut(s) 734, 880, 1085
VspI ATTAAT 1 cut(s) 2154
XagI CCTNNNNNAGG 1 cut(s) 1898
XapI RAATTY 8 cut(s) 136, 324, 886, 1107, 2160, 2522, 2936, 3425
XceI RCATGY 5 cut(s) 463, 1265, 2245, 3374, 3634
XcmI CCANNNNNNNNNTGG 1 cut(s) 2045
XhoI CTCGAG 1 cut(s) 1718
XmaJI CCTAGG 2 cut(s) 2542, 2681
XmiI GTMKAC 1 cut(s) 3208
XspI CTAG 9 cut(s) 512, 729, 1319, 1427, 1434, 1440, 2543, 2682, 3089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.