Rorug02G0231900

DNA repair metallo-beta-lactamase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015940
Physical Location & Seq
Reverse (-)
23113717 .. 23126247
12531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0231900.1

Sequence Viewer

Length: 2295 bp
ATGGCTTCATTAGCCGCTCCTATTTCTAACAAGGTCAAGAAGATATGGGATAAGTGGAATCTGCGGAGCTTCATCATATTAAGTCTCACATTGCAGACCTTCTTAATTCTCTTTGCACCCTTGAGAAAGCGATCATCGAGCAAATGGGTAATCGTGCCCATCTGGTTGGCTTACTTGCTCGCTGACTGGGCTGCTAACTTCGCTATCGGACTAATTGCAAGCAGCCAAACGAACACTGATCAAGGTTCGCCAGAGAATGGTAATCTATTGGCATTCTGGGCTCCCTTTCTTCTTTTGCACCTTGGTGGTCCAGACACCATAATTGCAATTGCTATGGAAGACAATGCGTTGTGGCCAAGGCACTTGCTTGGTCTCGTATTCCAGGTTGTAGCTGCAGCGTACGTCTTCGGTATGCAGTTCTCTAACCAAAACAAGCTACTGTGGCCAACACTCTTACTGTTCGTACCAGCACTTGTCAAGTACGGTGAGCGAACACGTGCTTTATATCTTGCCAGCTTGGAAAGTCTCAAGGAAACCATACTTGCAGTACCGGAACCTGGACCGGATTATGCAAAGTACATGGATGAGTACTCCTCAAGAAAAGCTGCCCATCTTCCAATTAAAATAGAAATTGAAGAAGGTCGTAGCTCAGATTCTAAGAATGTGACTTACCGACTGGGAGAAGGAGTCATTGATAATATTACACTAGTGGAGGGTGCCCATCACTTGTTTCAGATTTCCATGGGTCTTATTATAGATCTTGTGTTTGACTATCATCAGCGCAACGAGAGCCGTGCCTATTTCAAAATATTGAAACCAGATGATGCTTTTACATCAATTGCGACTGAGCTCAATTTTATGTATGAAGCTCTGTACACCAAAGCTTATGTGGTACATTCAAAACGGGGATACTTGTTGAAAGCTACATCCTTCATCGCCGTTTGCATAGCCTTTGTTTTCTTCTATAGAATAGAGAAACATGGCTTTCACAGGTTTGATGTTGGAATTACTTATTCCTTGCTTTTTGGCGCCATAGCTCTTGATTCAATAGCTCTTTCGATGCTGATATTATCTGATTGGACGATCGCTGTTGTATACAAGTTCTGCAAAAAGTCTCGCGCAGTCACTGATCTTATGATGAAGTACCTGGAGTACAAGAGATCATGGCGACCAACAACTCCACCAAAGTGTCTGGAGCGGACCAGAAAGATTTTATTTCGAAGATGGTGTGAATCTGTCTCCGGTTTCAGCTTCATAGATTATTCTCTCCGAGAATGTGGAAGATCAGTAGTCCAACCTGCAATTTTGGACCAAATTGGCATTTACCGAAGGATCATCAGATTTTTGGGCTACCTTTACCATGGAATCATCATATTCCTAGGCCACCTTTACCTCAGAATCATTAAATTCTTTGGCCTCAAGTATCTTCGAGATGAGATGAAGTACCGATCCAGCAAGAGACTGGAAGAGAATTTGTGGAAATTCATTTTTGATGAGTTGAAAAGTAAATCATTGGAAGAAGTCGATGTTCCAGATCAAAAAAAAGAAGAAGCAGGTGATGTTCCCGAAATTGCTAAAAAAATATGTTCGTCCCAAGGGGATTGGGTTCTCCTAAAAAAGTATGAGACGCATTTGGAGTACAAGAACTTGCTAGCATGCTTTGTTGATGTTACTTACGACCGACGCGTTCTGCTGTGGCATATTGCTACTGAGATGTGCTATTACAGAGTTGATACAGGCAATGGTGGTAAGCATGGTGAATTTAGTAAGAGCCTGTCTGATTATATGCTATATCTCTTAATCATGCAGCCTGCTTTGATGTCCTCTGTAGCGGGAATCGGACAAAAGAGATTTAGAGATACGGTTGCAGAAGCCAAAAAATTCTTTAAAAAAAGGGGGTTGGGTTCCGATGTGAAACTAGGCAAGGAGGAACTAGGTAAGGCTTGTTGCAAACTCCTTGATGTAGATACAGGAGTTAAACCAGTCGATGTCAAAGGGAATAGAAGTAAATCTGTTTTGTTTGATGCATGTATTTTGGCCAGGCAGCTGATGAAATTCGAAGACAAGAAATGGGAATTAATAAGCTCGGTGTGGGTGGAATTGCTATCATATGCTGCAAGTCATTGCAGAGCACATAGCCACGCGCAATTGCTGACTAAAGGTGGAGAGCTTGTCACTTTTGTTTGGTTACTGATGGCTCGCTTTGGCATTGAGGAGGACATCCAAGTACTGGAGGTCCAAGCAAGAGTAAAACTGATCATGGACAAGCAACCTGATGACTTCAAGAGTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DRMBL Lactamase_B_2

Protein Analysis

764

Amino Acids

87.64

Weight (kDa)

9.12

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 55 - 421 3.3e-90 Domain of unknown function (DUF4220)
DUF594 PF04578 687 - 737 1.2e-21 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015940)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19025 AT1G19025 AT1G19025
fragaria_vesca FvH4_1g24320
pyrus_communis pycom01g02340
rosa_chinensis RchiOBHm_Chr2g0120831
rosa_laevigata RLG00000018593
rosa_multiflora Rmu_sc0000621.1_g000008
rosa_roxburghii Rroxscaffold_2G00122800
rosa_rugosa Rorug02G0231900
rosa_samantha Rh2AG288500 Rh2BG299500 Rh2CG277500 Rh2DG313600
rosa_wichuraiana Rw2G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1544
Acc36I ACCTGC 2 cut(s) 1306, 1544
AccB1I GGYRCC 2 cut(s) 716, 1028
AccB7I CCANNNNNTGG 2 cut(s) 257, 2230
AccBSI CCGCTC 2 cut(s) 17, 1198
AccI GTMKAC 1 cut(s) 1095
AccII CGCG 3 cut(s) 1119, 1686, 2144
AciI CCGC 4 cut(s) 15, 64, 1198, 1832
AclWI GGATC 2 cut(s) 1340, 1443
AcoI YGGCCR 3 cut(s) 353, 443, 2037
AcsI RAATTY 6 cut(s) 1406, 1471, 1481, 1760, 1880, 2054
AcvI CACGTG 1 cut(s) 497
AcyI GRCGYC 1 cut(s) 1029
AfiI CCNNNNNNNGG 3 cut(s) 257, 557, 2230
AflIII ACRYGT 2 cut(s) 494, 1684
AgsI TTSAA 8 cut(s) 635, 805, 814, 900, 919, 1047, 1501, 2284
AhlI ACTAGT 1 cut(s) 706
AjnI CCWGG 4 cut(s) 381, 556, 1146, 2039
AleI CACNNNNGTG 2 cut(s) 303, 1186
Alw21I GWGCWC 2 cut(s) 852, 2134
Alw26I GTCTC 7 cut(s) 89, 377, 530, 1119, 1243, 1453, 1619
AlwI GGATC 2 cut(s) 1340, 1443
AlwNI CAGNNNCTG 1 cut(s) 1127
AoxI GGCC 5 cut(s) 353, 443, 1381, 1414, 2037
ApeKI GCWGC 8 cut(s) 191, 222, 392, 395, 605, 1807, 2044, 2114
ApoI RAATTY 6 cut(s) 1406, 1471, 1481, 1760, 1880, 2054
AseI ATTAAT 1 cut(s) 2078
AspA2I CCTAGG 1 cut(s) 1378
AspLEI GCGC 4 cut(s) 783, 1031, 1121, 2146
AspS9I GGNCC 5 cut(s) 308, 560, 1200, 1309, 2236
AsuHPI GGTGA 3 cut(s) 497, 1568, 1769
AsuII TTCGAA 2 cut(s) 1219, 2058
AsuNHI GCTAGC 1 cut(s) 1651
AvaII GGWCC 5 cut(s) 308, 560, 1200, 1309, 2236
AvrII CCTAGG 1 cut(s) 1378
BaeGI GKGCMC 2 cut(s) 159, 721
BaeI ACNNNNGTAYC 2 cut(s) 1959, 1992
BalI TGGCCA 3 cut(s) 355, 445, 2039
BanI GGYRCC 2 cut(s) 716, 1028
BanII GRGCYC 2 cut(s) 283, 852
BbrPI CACGTG 1 cut(s) 497
BbsI GAAGAC 3 cut(s) 345, 397, 2067
Bbv12I GWGCWC 2 cut(s) 852, 2134
BbvI GCAGC 8 cut(s) 178, 234, 379, 407, 592, 1819, 2056, 2101
BccI CCATC 5 cut(s) 167, 618, 729, 1218, 2188
BceAI ACGGC 2 cut(s) 777, 923
BcgI CGANNNNNNTGC 2 cut(s) 776, 810
BciT130I CCWGG 4 cut(s) 383, 558, 1148, 2041
BciVI GTATCC 1 cut(s) 902
BclI TGATCA 2 cut(s) 238, 2256
BcoDI GTCTC 7 cut(s) 89, 377, 530, 1119, 1243, 1453, 1619
BcuI ACTAGT 1 cut(s) 706
BfaI CTAG 5 cut(s) 707, 1379, 1652, 1919, 1934
BfmI CTRYAG 3 cut(s) 393, 964, 1827
BfoI RGCGCY 1 cut(s) 1032
BfuAI ACCTGC 2 cut(s) 1306, 1544
BfuI GTATCC 1 cut(s) 902
BglII AGATCT 1 cut(s) 757
BisI GCNGC 9 cut(s) 15, 192, 223, 393, 396, 606, 1808, 2045, 2115
BlnI CCTAGG 1 cut(s) 1378
BlsI GCNGC 9 cut(s) 16, 193, 224, 394, 397, 607, 1809, 2046, 2116
BmcAI AGTACT 2 cut(s) 590, 2229
Bme1390I CCNGG 4 cut(s) 383, 558, 1148, 2041
Bme18I GGWCC 5 cut(s) 308, 560, 1200, 1309, 2236
BmgT120I GGNCC 5 cut(s) 308, 560, 1200, 1309, 2236
BmiI GGNNCC 5 cut(s) 282, 555, 718, 1030, 1906
BmrFI CCNGG 4 cut(s) 383, 558, 1148, 2041
BmrI ACTGGG 2 cut(s) 196, 686
BmsI GCATC 3 cut(s) 814, 1050, 2014
BmtI GCTAGC 1 cut(s) 1655
BmuI ACTGGG 2 cut(s) 196, 686
BpiI GAAGAC 3 cut(s) 345, 397, 2067
BplI GAGNNNNNCTC 2 cut(s) 578, 610
BpmI CTGGAG 3 cut(s) 1169, 1214, 2252
Bpu14I TTCGAA 2 cut(s) 1219, 2058
BpuEI CTTGAG 4 cut(s) 142, 512, 580, 1403
BsaAI YACGTR 1 cut(s) 497
BsaHI GRCGYC 1 cut(s) 1029
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
BsaWI WCCGGW 3 cut(s) 550, 562, 1241
BsaXI ACNNNNNCTCC 4 cut(s) 672, 702, 2157, 2187
Bsc4I CCNNNNNNNGG 3 cut(s) 257, 557, 2230
Bse1I ACTGG 5 cut(s) 191, 681, 1467, 1982, 2235
Bse3DI GCAATG 3 cut(s) 89, 1747, 2122
BseBI CCWGG 4 cut(s) 383, 558, 1148, 2041
BseDI CCNNGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
BseGI GGATG 3 cut(s) 589, 926, 2220
BseLI CCNNNNNNNGG 3 cut(s) 257, 557, 2230
BseMI GCAATG 3 cut(s) 89, 1747, 2122
BseMII CTCAG 4 cut(s) 663, 837, 1408, 1701
BseNI ACTGG 5 cut(s) 191, 681, 1467, 1982, 2235
BseRI GAGGAG 2 cut(s) 583, 2228
BseSI GKGCMC 2 cut(s) 159, 721
BseXI GCAGC 8 cut(s) 178, 234, 379, 407, 592, 1819, 2056, 2101
Bsh1236I CGCG 3 cut(s) 1119, 1686, 2144
Bsh1285I CGRYCG 2 cut(s) 1086, 1681
BshFI GGCC 5 cut(s) 355, 445, 1383, 1416, 2039
BshNI GGYRCC 2 cut(s) 716, 1028
BsiEI CGRYCG 2 cut(s) 1086, 1681
BsiHKAI GWGCWC 2 cut(s) 852, 2134
BsiSI CCGG 3 cut(s) 551, 563, 1242
BsiWI CGTACG 1 cut(s) 399
BslFI GGGAC 1 cut(s) 1576
BslI CCNNNNNNNGG 3 cut(s) 257, 557, 2230
BsmAI GTCTC 7 cut(s) 89, 377, 530, 1119, 1243, 1453, 1619
BsmBI CGTCTC 1 cut(s) 1619
BsmFI GGGAC 1 cut(s) 1576
BsmI GAATGC 1 cut(s) 272
BsnI GGCC 5 cut(s) 355, 445, 1383, 1416, 2039
Bso31I GGTCTC 1 cut(s) 377
Bsp119I TTCGAA 2 cut(s) 1219, 2058
Bsp1286I GDGCHC 5 cut(s) 159, 283, 721, 852, 2134
Bsp1407I TGTACA 1 cut(s) 873
Bsp19I CCATGG 2 cut(s) 741, 1360
BspACI CCGC 4 cut(s) 15, 64, 1198, 1832
BspANI GGCC 5 cut(s) 355, 445, 1383, 1416, 2039
BspCNI CTCAG 4 cut(s) 662, 838, 1407, 1702
BspFNI CGCG 3 cut(s) 1119, 1686, 2144
BspLI GGNNCC 5 cut(s) 282, 555, 718, 1030, 1906
BspMAI CTGCAG 1 cut(s) 397
BspMI ACCTGC 2 cut(s) 1306, 1544
BspOI GCTAGC 1 cut(s) 1655
BspPI GGATC 2 cut(s) 1340, 1443
BspT104I TTCGAA 2 cut(s) 1219, 2058
BspT107I GGYRCC 2 cut(s) 716, 1028
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 2 cut(s) 17, 1198
BsrDI GCAATG 3 cut(s) 89, 1747, 2122
BsrGI TGTACA 1 cut(s) 873
BsrI ACTGG 5 cut(s) 191, 681, 1467, 1982, 2235
BssECI CCNNGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
BssNAI GTATAC 1 cut(s) 1096
BssNI GRCGYC 1 cut(s) 1029
BssT1I CCWWGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
Bst1107I GTATAC 1 cut(s) 1096
Bst2UI CCWGG 4 cut(s) 383, 558, 1148, 2041
Bst4CI ACNGT 4 cut(s) 441, 459, 485, 1864
Bst6I CTCTTC 1 cut(s) 1461
BstACI GRCGYC 1 cut(s) 1029
BstAUI TGTACA 1 cut(s) 873
BstBAI YACGTR 1 cut(s) 497
BstBI TTCGAA 2 cut(s) 1219, 2058
BstC8I GCNNGC 7 cut(s) 180, 220, 514, 1653, 1657, 1812, 2200
BstDEI CTNAG 5 cut(s) 649, 657, 846, 1394, 1710
BstDSI CCRYGG 2 cut(s) 741, 1360
BstF5I GGATG 3 cut(s) 589, 926, 2220
BstFNI CGCG 3 cut(s) 1119, 1686, 2144
BstH2I RGCGCY 1 cut(s) 1032
BstHHI GCGC 4 cut(s) 783, 1031, 1121, 2146
BstMAI GTCTC 7 cut(s) 89, 377, 530, 1119, 1243, 1453, 1619
BstMCI CGRYCG 2 cut(s) 1086, 1681
BstMWI GCNNNNNNNGC 6 cut(s) 11, 188, 200, 278, 442, 789
BstNI CCWGG 4 cut(s) 383, 558, 1148, 2041
BstNSI RCATGY 2 cut(s) 1659, 2031
BstSCI CCNGG 4 cut(s) 381, 556, 1146, 2039
BstSFI CTRYAG 3 cut(s) 393, 964, 1827
BstSLI GKGCMC 2 cut(s) 159, 721
BstUI CGCG 3 cut(s) 1119, 1686, 2144
BstV1I GCAGC 8 cut(s) 178, 234, 379, 407, 592, 1819, 2056, 2101
BstV2I GAAGAC 3 cut(s) 345, 397, 2067
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 1 cut(s) 166
BstYI RGATCY 1 cut(s) 757
BstZ17I GTATAC 1 cut(s) 1096
BsuI GTATCC 1 cut(s) 902
BsuRI GGCC 5 cut(s) 355, 445, 1383, 1416, 2039
BtgI CCRYGG 2 cut(s) 741, 1360
BtgZI GCGATG 1 cut(s) 919
BtsCI GGATG 3 cut(s) 589, 926, 2220
BtsIMutI CAGTG 2 cut(s) 234, 1125
BveI ACCTGC 2 cut(s) 1306, 1544
Cac8I GCNNGC 7 cut(s) 180, 220, 514, 1653, 1657, 1812, 2200
CaiI CAGNNNCTG 1 cut(s) 1127
CfoI GCGC 4 cut(s) 783, 1031, 1121, 2146
Cfr13I GGNCC 5 cut(s) 308, 560, 1200, 1309, 2236
CseI GACGC 2 cut(s) 1636, 1692
DdeI CTNAG 5 cut(s) 649, 657, 846, 1394, 1710
DinI GGCGCC 1 cut(s) 1030
DraI TTTAAA 1 cut(s) 1888
EaeI YGGCCR 3 cut(s) 353, 443, 2037
Eam1104I CTCTTC 1 cut(s) 1461
EarI CTCTTC 1 cut(s) 1461
Ecl136II GAGCTC 1 cut(s) 850
Eco130I CCWWGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
Eco24I GRGCYC 2 cut(s) 283, 852
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 5 cut(s) 308, 560, 1200, 1309, 2236
Eco53kI GAGCTC 1 cut(s) 850
Eco72I CACGTG 1 cut(s) 497
EcoICRI GAGCTC 1 cut(s) 850
EcoRII CCWGG 4 cut(s) 381, 556, 1146, 2039
EcoT14I CCWWGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
EcoT22I ATGCAT 1 cut(s) 2029
EcoT38I GRGCYC 2 cut(s) 283, 852
EgeI GGCGCC 1 cut(s) 1030
EheI GGCGCC 1 cut(s) 1030
ErhI CCWWGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
Esp3I CGTCTC 1 cut(s) 1619
FaqI GGGAC 1 cut(s) 1576
FauI CCCGC 1 cut(s) 1825
FauNDI CATATG 1 cut(s) 2110
FbaI TGATCA 2 cut(s) 238, 2256
FblI GTMKAC 1 cut(s) 1095
Fnu4HI GCNGC 9 cut(s) 15, 192, 223, 393, 396, 606, 1808, 2045, 2115
FokI GGATG 3 cut(s) 596, 913, 2207
FriOI GRGCYC 2 cut(s) 283, 852
Fsp4HI GCNGC 9 cut(s) 15, 192, 223, 393, 396, 606, 1808, 2045, 2115
FspBI CTAG 5 cut(s) 707, 1379, 1652, 1919, 1934
GlaI GCGC 4 cut(s) 782, 1030, 1120, 2145
GluI GCNGC 9 cut(s) 15, 192, 223, 393, 396, 606, 1808, 2045, 2115
GsuI CTGGAG 3 cut(s) 1169, 1214, 2252
HaeII RGCGCY 1 cut(s) 1032
HaeIII GGCC 5 cut(s) 355, 445, 1383, 1416, 2039
HapII CCGG 3 cut(s) 551, 563, 1242
HgaI GACGC 2 cut(s) 1636, 1692
HhaI GCGC 4 cut(s) 783, 1031, 1121, 2146
Hin1I GRCGYC 1 cut(s) 1029
Hin6I GCGC 4 cut(s) 781, 1029, 1119, 2144
HinP1I GCGC 4 cut(s) 781, 1029, 1119, 2144
HindIII AAGCTT 1 cut(s) 882
HinfI GANTC 8 cut(s) 58, 653, 687, 1043, 1232, 1365, 1398, 1836
HpaII CCGG 3 cut(s) 551, 563, 1242
HphI GGTGA 3 cut(s) 497, 1568, 1769
Hpy166II GTNNAC 2 cut(s) 876, 1096
Hpy188III TCNNGA 9 cut(s) 37, 311, 597, 1040, 1193, 1430, 1532, 1565, 2284
Hpy8I GTNNAC 2 cut(s) 876, 1096
Hpy99I CGWCG 1 cut(s) 1686
HpyAV CCTTC 5 cut(s) 109, 632, 677, 940, 1323
HpyCH4III ACNGT 4 cut(s) 441, 459, 485, 1864
HpyCH4IV ACGT 2 cut(s) 402, 496
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 188, 200, 278, 442, 789
HpyF3I CTNAG 5 cut(s) 649, 657, 846, 1394, 1710
HpySE526I ACGT 2 cut(s) 402, 496
Hsp92I GRCGYC 1 cut(s) 1029
HspAI GCGC 4 cut(s) 781, 1029, 1119, 2144
KasI GGCGCC 1 cut(s) 1028
Ksp22I TGATCA 2 cut(s) 238, 2256
LmnI GCTCC 4 cut(s) 22, 66, 286, 1195
Lsp1109I GCAGC 8 cut(s) 178, 234, 379, 407, 592, 1819, 2056, 2101
LweI GCATC 3 cut(s) 814, 1050, 2014
MaeI CTAG 5 cut(s) 707, 1379, 1652, 1919, 1934
MaeII ACGT 2 cut(s) 402, 496
MaeIII GTNAC 5 cut(s) 664, 1123, 1669, 2173, 2187
MbiI CCGCTC 2 cut(s) 17, 1198
MfeI CAATTG 3 cut(s) 327, 837, 2147
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 5 cut(s) 159, 283, 721, 852, 2134
MlsI TGGCCA 3 cut(s) 355, 445, 2039
MluI ACGCGT 1 cut(s) 1684
MluNI TGGCCA 3 cut(s) 355, 445, 2039
Mly113I GGCGCC 1 cut(s) 1029
MlyI GAGTC 1 cut(s) 696
MmeI TCCRAC 2 cut(s) 982, 1318
MnlI CCTC 9 cut(s) 604, 706, 1403, 1427, 1834, 1921, 2206, 2209, 2227
Mox20I TGGCCA 3 cut(s) 355, 445, 2039
Mph1103I ATGCAT 1 cut(s) 2029
MscI TGGCCA 3 cut(s) 355, 445, 2039
MseI TTAA 8 cut(s) 80, 104, 621, 1404, 1799, 1887, 1977, 2078
MslI CAYNNNNRTG 2 cut(s) 303, 1186
Msp20I TGGCCA 3 cut(s) 355, 445, 2039
MspA1I CMGCKG 1 cut(s) 2047
MspI CCGG 3 cut(s) 551, 563, 1242
MspR9I CCNGG 4 cut(s) 383, 558, 1148, 2041
MunI CAATTG 3 cut(s) 327, 837, 2147
Mva1269I GAATGC 1 cut(s) 272
MvaI CCWGG 4 cut(s) 383, 558, 1148, 2041
MvnI CGCG 3 cut(s) 1119, 1686, 2144
MwoI GCNNNNNNNGC 6 cut(s) 11, 188, 200, 278, 442, 789
NarI GGCGCC 1 cut(s) 1029
NcoI CCATGG 2 cut(s) 741, 1360
NdeI CATATG 1 cut(s) 2110
NheI GCTAGC 1 cut(s) 1651
NlaIV GGNNCC 5 cut(s) 282, 555, 718, 1030, 1906
NmuCI GTSAC 3 cut(s) 664, 1123, 2173
NsiI ATGCAT 1 cut(s) 2029
NspI RCATGY 2 cut(s) 1659, 2031
NspV TTCGAA 2 cut(s) 1219, 2058
OliI CACNNNNGTG 2 cut(s) 303, 1186
PaeI GCATGC 1 cut(s) 1659
PaqCI CACCTGC 1 cut(s) 1544
PcsI WCGNNNNNNNCGW 1 cut(s) 1683
PctI GAATGC 1 cut(s) 272
PfeI GAWTC 7 cut(s) 58, 653, 1043, 1232, 1365, 1398, 1836
Pfl23II CGTACG 1 cut(s) 399
PflMI CCANNNNNTGG 2 cut(s) 257, 2230
PkrI GCNGC 9 cut(s) 16, 193, 224, 394, 397, 607, 1809, 2046, 2116
Ple19I CGATCG 1 cut(s) 1086
PleI GAGTC 1 cut(s) 695
PluTI GGCGCC 1 cut(s) 1032
PmaCI CACGTG 1 cut(s) 497
PmlI CACGTG 1 cut(s) 497
PpsI GAGTC 1 cut(s) 695
Ppu21I YACGTR 1 cut(s) 497
PshBI ATTAAT 1 cut(s) 2078
Psp124BI GAGCTC 1 cut(s) 852
Psp6I CCWGG 4 cut(s) 381, 556, 1146, 2039
PspCI CACGTG 1 cut(s) 497
PspGI CCWGG 4 cut(s) 381, 556, 1146, 2039
PspLI CGTACG 1 cut(s) 399
PspN4I GGNNCC 5 cut(s) 282, 555, 718, 1030, 1906
PspPI GGNCC 5 cut(s) 308, 560, 1200, 1309, 2236
PstI CTGCAG 1 cut(s) 397
PstNI CAGNNNCTG 1 cut(s) 1127
PsuI RGATCY 1 cut(s) 757
PvuI CGATCG 1 cut(s) 1086
PvuII CAGCTG 1 cut(s) 2047
RseI CAYNNNNRTG 2 cut(s) 303, 1186
SacI GAGCTC 1 cut(s) 852
SaqAI TTAA 8 cut(s) 80, 104, 621, 1404, 1799, 1887, 1977, 2078
SatI GCNGC 9 cut(s) 15, 192, 223, 393, 396, 606, 1808, 2045, 2115
Sau96I GGNCC 5 cut(s) 308, 560, 1200, 1309, 2236
ScaI AGTACT 2 cut(s) 590, 2229
SchI GAGTC 1 cut(s) 696
ScrFI CCNGG 4 cut(s) 383, 558, 1148, 2041
SduI GDGCHC 5 cut(s) 159, 283, 721, 852, 2134
SfaNI GCATC 3 cut(s) 814, 1050, 2014
SfcI CTRYAG 3 cut(s) 393, 964, 1827
SfoI GGCGCC 1 cut(s) 1030
SfuI TTCGAA 2 cut(s) 1219, 2058
SinI GGWCC 5 cut(s) 308, 560, 1200, 1309, 2236
SmiMI CAYNNNNRTG 2 cut(s) 303, 1186
SmlI CTYRAG 4 cut(s) 121, 527, 595, 1418
SmoI CTYRAG 4 cut(s) 121, 527, 595, 1418
SpeI ACTAGT 1 cut(s) 706
SphI GCATGC 1 cut(s) 1659
SsiI CCGC 4 cut(s) 15, 64, 1198, 1832
SspDI GGCGCC 1 cut(s) 1028
SspI AATATT 2 cut(s) 700, 810
SspMI CTAG 5 cut(s) 707, 1379, 1652, 1919, 1934
SstI GAGCTC 1 cut(s) 852
StyD4I CCNGG 4 cut(s) 381, 556, 1146, 2039
StyI CCWWGG 6 cut(s) 301, 356, 741, 1360, 1378, 1594
TaaI ACNGT 4 cut(s) 441, 459, 485, 1864
TaiI ACGT 2 cut(s) 405, 499
TaqI TCGA 7 cut(s) 137, 1058, 1219, 1429, 1524, 1986, 2058
TaqII GACCGA 1 cut(s) 1695
TatI WGTACW 6 cut(s) 576, 588, 873, 1152, 1638, 2227
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 7 cut(s) 58, 653, 1043, 1232, 1365, 1398, 1836
Tru1I TTAA 8 cut(s) 80, 104, 621, 1404, 1799, 1887, 1977, 2078
Tru9I TTAA 8 cut(s) 80, 104, 621, 1404, 1799, 1887, 1977, 2078
TscAI CASTG 2 cut(s) 241, 1132
TseFI GTSAC 3 cut(s) 664, 1123, 2173
TseI GCWGC 8 cut(s) 191, 222, 392, 395, 605, 1807, 2044, 2114
Tsp45I GTSAC 3 cut(s) 664, 1123, 2173
TspDTI ATGAA 8 cut(s) 61, 879, 922, 1154, 1243, 1454, 1474, 2066
TspRI CASTG 2 cut(s) 241, 1132
Van91I CCANNNNNTGG 2 cut(s) 257, 2230
VpaK11BI GGWCC 5 cut(s) 308, 560, 1200, 1309, 2236
VspI ATTAAT 1 cut(s) 2078
XapI RAATTY 6 cut(s) 1406, 1471, 1481, 1760, 1880, 2054
XceI RCATGY 2 cut(s) 1659, 2031
XcmI CCANNNNNNNNNTGG 2 cut(s) 886, 1459
XmaJI CCTAGG 1 cut(s) 1378
XmiI GTMKAC 1 cut(s) 1095
XspI CTAG 5 cut(s) 707, 1379, 1652, 1919, 1934
ZrmI AGTACT 2 cut(s) 590, 2229
Zsp2I ATGCAT 1 cut(s) 2029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.