Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0017482

Physical Location & Seq

Genomic Coordinates Forward (+)

30242019 .. 30244008

Gene Structure 1990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0280100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGGTCCAATTTCACTGTCTGGACCAACGGAGTTCGATGTAATGAAAAGTAGTGAACTTGAAAGGTATTTGCGCAACGATGCCGGGCTTTATGAGTGTAGGGAGGAGTCTCTGATTAGAGAGGAAGTTCTCGGAAGACTTGACGAGATTGTTAAGCAATGGGTTAAAGCAATTAGCCGAGCCAAAGGTTTCGATGAGGAATTTGTAGAAGAAGCAAATGCTAAGGTCTTCACCTTTGGGTCATACAGGCTAGGAGTTCATAGCCCTGGTGCAGATATAGATACACTCTGCGTGGGACCGGCATATGTAACTCGAGAAGAGGGTTTCTTTGGGGAGCTGTATAAGATGTTGTCTGAGATGCCAGAAGAAGTAACTGAGTTGAATCCTGTGCATGAAGCTCACGTTCCAGTTCTCAAGTTCAAGTTCAATGGGGTTTCGATAGACCTCGTTTATGCACGACTATCGCTTTCAGTTATTCCTGAAGACTTGGATTTGTCACAAGACTCAATCCTACAACATGTCAGTGCTGGTGATGAACAAACTGTTCGAAGCCTCAATGGTTGTAGAGTTACGGACCAAATTCTGAAGTTGGTCCCAAACATTCAGACTTTCCGCACAACATTAAGATGCATTAGGTTATGGGCAAAGCATCGCTGTGTTTATTCGAATGTTGCAGGGTTTCTTGGTGGTATAAACTGGGCATTGCTTGTGGCTTTCATATGCCAACTTTACCCAAATGCATTGCCTAGTCTACTAGTGTCTCGGTTCTTCAGGGTCTATACTCAGTGGCGTTGGCCAAATCCAGTATTGCTCTGCCCTATCAAAGAAGGGCTTGGACTTCAGGTTTGGGATCCAAGAAGAAATGTAAGGGATAGGTACCATTTGATGCCTATAATTACTCCAGCTTATCCTTCCATGAACTCTAGCTACAATGTGTCGCGGAGTACTTTGCGTATCATGTTAGGGGAGTTTCAGAGGGGAAATGACATTTGTAAGGCCATGGAGGCAGAAAATAAGGATGCTGATTGGGGTACCCTTTTCGAGTCATATGCTTTCTTTGACGCATATAAGAATTACTTGCAGATAGACATAAGTGCAGGAGGTGCTGATGACTTCAGGAAATGGAAAGGCTGGGTCGAGTCTCGGATCCGTCAACTAACACTGAAAGTTGAGAATGAAACTGGCGGCATGTTGCAGTGTCACCCACACCCTGGTGATTTTCCAGACAAGACCCTACCTTATCATAGCTCATTCTTCATGGGACTACAGCGTACCCAACAAGTTCCGGTCAAAGGAGGTGAGCCGGTTCATTTAGGGAGATGTGTTGATGAATTTAAGTGGGCTGTGAATGCTTATACTTCAAGGAAGACTGGAATGGACATTCGTGTATCCCATGTAAAGCGCAGGGACATCCCTAATTTTTTATTTCCTGGAGGGATCCGACCTTTGCATACATCTAAAACAACTTGGGAGAGAAGGCAACGTTCCCCTCAACCGGAGGCTTCCCGCGATATAGCTCAATGTCAGTCTAAAACAACTGTTCTAGATGGGACAGATGGAGGTCAGAAGAGAAAAAGGCAGGAGAATGGTGATGCAGAGACCGACTCCTCATCAAGGCACCCCAATTCTAAACAAGCAGAGAAGCTGGCACGGAAGCCACATGTTCCGGACCAAGTTTTGCCAAAAGAACTGGATGAGCTTGAAGATGATAGAGATCAAGTCAAAGACTTTGCTGGTGGGAACATGAAGGACAGTCACACAATGGGGGCAATAAAATCTAACAATCGAGCTGGTCCTTCCACTGCTTGTTCATATATTGGCGACTTGGAGGAACTTGAGTTTAATGAAATTAAGGTGCCGTACTATCAAACCCCTTCTGAACCTGTGGCGAAGCCAATCATCAGAGTGAATTTCATTACATTGGCCAGTGGAACATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04013 ko04014 ko04015 ko04024 ko04062 ko04071 ko04145 ko04151 ko04310 ko04360 ko04370 ko04380 ko04510 ko04520 ko04530 ko04620 ko04650 ko04662 ko04664 ko04666 ko04670 ko04722 ko04810 ko04932 ko04933 ko04972 ko05014 ko05100 ko05120 ko05131 ko05132 ko05167 ko05200 ko05203 ko05205 ko05210 ko05211 ko05212 ko05231 ko05416 ko05418 map04010 map04013 map04014 map04015 map04024 map04062 map04071 map04145 map04151 map04310 map04360 map04370 map04380 map04510 map04520 map04530 map04620 map04650 map04662 map04664 map04666 map04670 map04722 map04810 map04932 map04933 map04972 map05014 map05100 map05120 map05131 map05132 map05167 map05200 map05203 map05205 map05210 map05211 map05212 map05231 map05416 map05418

Pfam Domains

Protein Families

Ras

Protein Analysis

646

Amino Acids

73.23

Weight (kDa)

6.47

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP_NTPase	PF20750	3 - 198	1.2e-67	Poly(A) polymerase nucleotidyltransferase domain
NTP_transf_2	PF01909	67 - 151	1.5e-10	Nucleotidyltransferase domain
PAP_central	PF04928	203 - 348	2.9e-63	Poly(A) polymerase central domain
PAP_RNA-bind	PF04926	352 - 409	3e-11	Poly(A) polymerase predicted RNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0017482)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45970
fragaria_vesca	FvH4_6g26930 FvH4_6g26930
prunus_persica	Prupe.3G126500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0128711
rosa_laevigata	RLG00000019019
rosa_multiflora	Rmu_co8141152.1_g000001
rosa_roxburghii	Rroxscaffold_2G00115850
rosa_rugosa	Rorug02G0280100
rosa_samantha	Rh2BG341300 Rh2DG358000
rosa_wichuraiana	Rw2G026950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	74
Acc65I	GGTACC	2 cut(s)	876, 1031
AccB1I	GGYRCC	4 cut(s)	876, 1031, 1617, 1855
AccB7I	CCANNNNNTGG	1 cut(s)	1211
AccI	GTMKAC	1 cut(s)	751
AccII	CGCG	2 cut(s)	940, 1509
AccIII	TCCGGA	1 cut(s)	1666
AciI	CCGC	4 cut(s)	613, 940, 1185, 1507
AclI	AACGTT	1 cut(s)	1483
AclWI	GGATC	6 cut(s)	845, 858, 1141, 1154, 1432, 1445
AcoI	YGGCCR	2 cut(s)	794, 1923
AcsI	RAATTY	4 cut(s)	200, 579, 1331, 1909
AcuI	CTGAAG	5 cut(s)	501, 605, 754, 824, 1099
AfaI	GTAC	5 cut(s)	878, 946, 1033, 1273, 1862
AfiI	CCNNNNNNNGG	4 cut(s)	1211, 1292, 1495, 1614
AflIII	ACRYGT	3 cut(s)	517, 1660, 1934
AgsI	TTSAA	6 cut(s)	62, 382, 421, 427, 1362, 1703
AhlI	ACTAGT	1 cut(s)	754
AjnI	CCWGG	3 cut(s)	265, 1210, 1429
AleI	CACNNNNGTG	1 cut(s)	1212
AluBI	AGCT	9 cut(s)	337, 398, 905, 927, 1248, 1517, 1645, 1699, 1790
AluI	AGCT	9 cut(s)	337, 398, 905, 927, 1248, 1517, 1645, 1699, 1790
Alw26I	GTCTC	4 cut(s)	114, 765, 1146, 1592
AlwI	GGATC	6 cut(s)	845, 858, 1141, 1154, 1432, 1445
Ama87I	CYCGRG	1 cut(s)	312
Aor13HI	TCCGGA	1 cut(s)	1666
AoxI	GGCC	3 cut(s)	794, 996, 1923
ApoI	RAATTY	4 cut(s)	200, 579, 1331, 1909
ArsI	GACNNNNNNTTYG	2 cut(s)	828, 860
Asp718I	GGTACC	2 cut(s)	876, 1031
AspLEI	GCGC	2 cut(s)	75, 1404
AspS9I	GGNCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
AsuC2I	CCSGG	1 cut(s)	85
AsuHPI	GGTGA	6 cut(s)	223, 542, 1193, 1226, 1310, 1601
AsuII	TTCGAA	2 cut(s)	547, 665
AvaI	CYCGRG	1 cut(s)	312
AvaII	GGWCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
BalI	TGGCCA	2 cut(s)	796, 1925
BamHI	GGATCC	3 cut(s)	850, 1146, 1437
BanI	GGYRCC	4 cut(s)	876, 1031, 1617, 1855
BbsI	GAAGAC	4 cut(s)	142, 220, 489, 1373
BccI	CCATC	2 cut(s)	1541, 1550
BceAI	ACGGC	1 cut(s)	1843
BcgI	CGANNNNNNTGC	4 cut(s)	444, 478, 1031, 1065
BciT130I	CCWGG	3 cut(s)	267, 1212, 1431
BciVI	GTATCC	1 cut(s)	1399
BcnI	CCSGG	1 cut(s)	85
BcoDI	GTCTC	4 cut(s)	114, 765, 1146, 1592
BcuI	ACTAGT	1 cut(s)	754
BfaI	CTAG	5 cut(s)	251, 747, 755, 924, 1544
BfmI	CTRYAG	1 cut(s)	1265
BfuI	GTATCC	1 cut(s)	1399
BglI	GCCNNNNNGGC	1 cut(s)	1004
BisI	GCNGC	1 cut(s)	1186
BlsI	GCNGC	1 cut(s)	1187
BmcAI	AGTACT	1 cut(s)	946
Bme1390I	CCNGG	4 cut(s)	85, 267, 1212, 1431
Bme18I	GGWCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
BmeT110I	CYCGRG	1 cut(s)	312
BmgT120I	GGNCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
BmrFI	CCNGG	4 cut(s)	85, 267, 1212, 1431
BmrI	ACTGGG	1 cut(s)	706
BmsI	GCATC	7 cut(s)	70, 348, 617, 658, 876, 1009, 1582
BmuI	ACTGGG	1 cut(s)	706
BpiI	GAAGAC	4 cut(s)	142, 220, 489, 1373
BplI	GAGNNNNNCTC	2 cut(s)	1589, 1621
BpmI	CTGGAG	2 cut(s)	885, 1452
Bpu10I	CCTNAGC	1 cut(s)	222
Bpu14I	TTCGAA	2 cut(s)	547, 665
BpuEI	CTTGAG	2 cut(s)	398, 1856
BpuMI	CCSGG	1 cut(s)	85
BsaBI	GATNNNNATC	1 cut(s)	1713
BsaI	GGTCTC	1 cut(s)	1592
BsaJI	CCNNGG	3 cut(s)	265, 999, 1210
BsaWI	WCCGGW	3 cut(s)	1285, 1495, 1666
Bsc4I	CCNNNNNNNGG	4 cut(s)	1211, 1292, 1495, 1614
Bse118I	RCCGGY	2 cut(s)	298, 1303
Bse1I	ACTGG	7 cut(s)	407, 701, 803, 1186, 1375, 1695, 1926
Bse3DI	GCAATG	3 cut(s)	164, 701, 740
Bse8I	GATNNNNATC	1 cut(s)	1713
BseAI	TCCGGA	1 cut(s)	1666
BseBI	CCWGG	3 cut(s)	267, 1212, 1431
BseDI	CCNNGG	3 cut(s)	265, 999, 1210
BseGI	GGATG	3 cut(s)	1024, 1410, 1699
BseJI	GATNNNNATC	1 cut(s)	1713
BseLI	CCNNNNNNNGG	4 cut(s)	1211, 1292, 1495, 1614
BseMI	GCAATG	3 cut(s)	164, 701, 740
BseMII	CTCAG	3 cut(s)	345, 366, 797
BseNI	ACTGG	7 cut(s)	407, 701, 803, 1186, 1375, 1695, 1926
BseRI	GAGGAG	2 cut(s)	119, 1597
BseYI	CCCAGC	1 cut(s)	1131
BsgI	GTGCAG	2 cut(s)	291, 1116
Bsh1236I	CGCG	2 cut(s)	940, 1509
BshFI	GGCC	3 cut(s)	796, 998, 1925
BshNI	GGYRCC	4 cut(s)	876, 1031, 1617, 1855
BsiHKCI	CYCGRG	1 cut(s)	312
BsiSI	CCGG	6 cut(s)	84, 299, 1286, 1304, 1496, 1667
BslFI	GGGAC	5 cut(s)	309, 578, 1275, 1421, 1564
BslI	CCNNNNNNNGG	4 cut(s)	1211, 1292, 1495, 1614
BsmAI	GTCTC	4 cut(s)	114, 765, 1146, 1592
BsmFI	GGGAC	5 cut(s)	309, 578, 1275, 1421, 1564
BsmI	GAATGC	1 cut(s)	1354
BsnI	GGCC	3 cut(s)	796, 998, 1925
Bso31I	GGTCTC	1 cut(s)	1592
BsoBI	CYCGRG	1 cut(s)	312
Bsp119I	TTCGAA	2 cut(s)	547, 665
Bsp13I	TCCGGA	1 cut(s)	1666
Bsp143I	GATC	4 cut(s)	850, 1146, 1437, 1714
Bsp19I	CCATGG	1 cut(s)	999
BspACI	CCGC	4 cut(s)	613, 940, 1185, 1507
BspANI	GGCC	3 cut(s)	796, 998, 1925
BspCNI	CTCAG	3 cut(s)	346, 367, 796
BspEI	TCCGGA	1 cut(s)	1666
BspFNI	CGCG	2 cut(s)	940, 1509
BspPI	GGATC	6 cut(s)	845, 858, 1141, 1154, 1432, 1445
BspT104I	TTCGAA	2 cut(s)	547, 665
BspT107I	GGYRCC	4 cut(s)	876, 1031, 1617, 1855
BspTNI	GGTCTC	1 cut(s)	1592
BsrDI	GCAATG	3 cut(s)	164, 701, 740
BsrFI	RCCGGY	2 cut(s)	298, 1303
BsrI	ACTGG	7 cut(s)	407, 701, 803, 1186, 1375, 1695, 1926
BssAI	RCCGGY	2 cut(s)	298, 1303
BssECI	CCNNGG	3 cut(s)	265, 999, 1210
BssMI	GATC	4 cut(s)	850, 1146, 1437, 1714
BssT1I	CCWWGG	1 cut(s)	999
Bst2UI	CCWGG	3 cut(s)	267, 1212, 1431
Bst4CI	ACNGT	4 cut(s)	18, 544, 1540, 1754
Bst6I	CTCTTC	2 cut(s)	312, 1562
BstAPI	GCANNNNNTGC	1 cut(s)	1103
BstBI	TTCGAA	2 cut(s)	547, 665
BstC8I	GCNNGC	1 cut(s)	1647
BstDEI	CTNAG	4 cut(s)	222, 354, 375, 783
BstDSI	CCRYGG	1 cut(s)	999
BstENI	CCTNNNNNAGG	1 cut(s)	1612
BstF5I	GGATG	3 cut(s)	1024, 1410, 1699
BstFNI	CGCG	2 cut(s)	940, 1509
BstHHI	GCGC	2 cut(s)	75, 1404
BstKTI	GATC	4 cut(s)	853, 1149, 1440, 1717
BstMAI	GTCTC	4 cut(s)	114, 765, 1146, 1592
BstMBI	GATC	4 cut(s)	850, 1146, 1437, 1714
BstMWI	GCNNNNNNNGC	3 cut(s)	1004, 1103, 1349
BstNI	CCWGG	3 cut(s)	267, 1212, 1431
BstNSI	RCATGY	4 cut(s)	521, 1192, 1664, 1938
BstSCI	CCNGG	4 cut(s)	83, 265, 1210, 1429
BstSFI	CTRYAG	1 cut(s)	1265
BstUI	CGCG	2 cut(s)	940, 1509
BstV2I	GAAGAC	4 cut(s)	142, 220, 489, 1373
BstX2I	RGATCY	3 cut(s)	850, 1146, 1437
BstYI	RGATCY	3 cut(s)	850, 1146, 1437
BsuI	GTATCC	1 cut(s)	1399
BsuRI	GGCC	3 cut(s)	796, 998, 1925
BtgI	CCRYGG	1 cut(s)	999
BtgZI	GCGATG	1 cut(s)	635
BtsCI	GGATG	3 cut(s)	1024, 1410, 1699
BtsI	GCAGTG	2 cut(s)	1202, 1800
BtsIMutI	CAGTG	7 cut(s)	14, 529, 791, 1160, 1202, 1800, 1933
Cac8I	GCNNGC	1 cut(s)	1647
CfoI	GCGC	2 cut(s)	75, 1404
Cfr10I	RCCGGY	2 cut(s)	298, 1303
Cfr13I	GGNCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
CseI	GACGC	1 cut(s)	1070
Csp6I	GTAC	5 cut(s)	877, 945, 1032, 1272, 1861
CviQI	GTAC	5 cut(s)	877, 945, 1032, 1272, 1861
DdeI	CTNAG	4 cut(s)	222, 354, 375, 783
DpnI	GATC	4 cut(s)	852, 1148, 1439, 1716
DpnII	GATC	4 cut(s)	850, 1146, 1437, 1714
EaeI	YGGCCR	2 cut(s)	794, 1923
Eam1104I	CTCTTC	2 cut(s)	312, 1562
EarI	CTCTTC	2 cut(s)	312, 1562
Eco130I	CCWWGG	1 cut(s)	999
Eco31I	GGTCTC	1 cut(s)	1592
Eco47I	GGWCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
Eco57I	CTGAAG	5 cut(s)	501, 605, 754, 824, 1099
Eco88I	CYCGRG	1 cut(s)	312
EcoNI	CCTNNNNNAGG	1 cut(s)	1612
EcoRII	CCWGG	3 cut(s)	265, 1210, 1429
EcoT14I	CCWWGG	1 cut(s)	999
EcoT22I	ATGCAT	2 cut(s)	632, 742
ErhI	CCWWGG	1 cut(s)	999
FalI	AAGNNNNNCTT	4 cut(s)	816, 848, 1061, 1093
FaqI	GGGAC	5 cut(s)	309, 578, 1275, 1421, 1564
FauI	CCCGC	1 cut(s)	1514
FauNDI	CATATG	3 cut(s)	304, 719, 1048
FblI	GTMKAC	1 cut(s)	751
Fnu4HI	GCNGC	1 cut(s)	1186
FokI	GGATG	3 cut(s)	1031, 1397, 1706
Fsp4HI	GCNGC	1 cut(s)	1186
FspBI	CTAG	5 cut(s)	251, 747, 755, 924, 1544
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	2 cut(s)	74, 1403
GluI	GCNGC	1 cut(s)	1186
GsaI	CCCAGC	1 cut(s)	1135
GsuI	CTGGAG	2 cut(s)	885, 1452
HaeIII	GGCC	3 cut(s)	796, 998, 1925
HapII	CCGG	6 cut(s)	84, 299, 1286, 1304, 1496, 1667
HgaI	GACGC	1 cut(s)	1070
HhaI	GCGC	2 cut(s)	75, 1404
Hin6I	GCGC	2 cut(s)	73, 1402
HinP1I	GCGC	2 cut(s)	73, 1402
HincII	GTYRAC	1 cut(s)	1154
HindII	GTYRAC	1 cut(s)	1154
HinfI	GANTC	6 cut(s)	107, 382, 503, 1043, 1139, 1604
HpaII	CCGG	6 cut(s)	84, 299, 1286, 1304, 1496, 1667
HphI	GGTGA	6 cut(s)	223, 542, 1193, 1226, 1310, 1601
Hpy166II	GTNNAC	3 cut(s)	56, 752, 1154
Hpy188III	TCNNGA	7 cut(s)	21, 314, 479, 1117, 1223, 1544, 1667
Hpy8I	GTNNAC	3 cut(s)	56, 752, 1154
HpyAV	CCTTC	6 cut(s)	821, 921, 1470, 1741, 1806, 1884
HpyCH4III	ACNGT	4 cut(s)	18, 544, 1540, 1754
HpyCH4IV	ACGT	2 cut(s)	402, 1483
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1004, 1103, 1349
HpyF3I	CTNAG	4 cut(s)	222, 354, 375, 783
HpySE526I	ACGT	2 cut(s)	402, 1483
HspAI	GCGC	2 cut(s)	73, 1402
Kpn2I	TCCGGA	1 cut(s)	1666
KpnI	GGTACC	2 cut(s)	880, 1035
Kzo9I	GATC	4 cut(s)	850, 1146, 1437, 1714
LmnI	GCTCC	1 cut(s)	334
LweI	GCATC	7 cut(s)	70, 348, 617, 658, 876, 1009, 1582
MaeI	CTAG	5 cut(s)	251, 747, 755, 924, 1544
MaeII	ACGT	2 cut(s)	402, 1483
MaeIII	GTNAC	6 cut(s)	307, 370, 495, 568, 1199, 1754
MalI	GATC	4 cut(s)	852, 1148, 1439, 1716
MboI	GATC	4 cut(s)	850, 1146, 1437, 1714
MflI	RGATCY	3 cut(s)	850, 1146, 1437
MlsI	TGGCCA	2 cut(s)	796, 1925
MluNI	TGGCCA	2 cut(s)	796, 1925
MlyI	GAGTC	5 cut(s)	116, 497, 1052, 1148, 1598
MmeI	TCCRAC	1 cut(s)	1465
Mox20I	TGGCCA	2 cut(s)	796, 1925
Mph1103I	ATGCAT	2 cut(s)	632, 742
MroI	TCCGGA	1 cut(s)	1666
MscI	TGGCCA	2 cut(s)	796, 1925
MseI	TTAA	6 cut(s)	153, 165, 623, 1335, 1842, 1851
MslI	CAYNNNNRTG	5 cut(s)	522, 625, 654, 1212, 1904
Msp20I	TGGCCA	2 cut(s)	796, 1925
MspI	CCGG	6 cut(s)	84, 299, 1286, 1304, 1496, 1667
MspR9I	CCNGG	4 cut(s)	85, 267, 1212, 1431
Mva1269I	GAATGC	1 cut(s)	1354
MvaI	CCWGG	3 cut(s)	267, 1212, 1431
MvnI	CGCG	2 cut(s)	940, 1509
MwoI	GCNNNNNNNGC	3 cut(s)	1004, 1103, 1349
NciI	CCSGG	1 cut(s)	85
NcoI	CCATGG	1 cut(s)	999
NdeI	CATATG	3 cut(s)	304, 719, 1048
NdeII	GATC	4 cut(s)	850, 1146, 1437, 1714
NmeAIII	GCCGAG	1 cut(s)	203
NmuCI	GTSAC	3 cut(s)	495, 1199, 1754
NsbI	TGCGCA	1 cut(s)	74
NsiI	ATGCAT	2 cut(s)	632, 742
NspI	RCATGY	4 cut(s)	521, 1192, 1664, 1938
NspV	TTCGAA	2 cut(s)	547, 665
OliI	CACNNNNGTG	1 cut(s)	1212
PaeR7I	CTCGAG	1 cut(s)	312
PciI	ACATGT	3 cut(s)	517, 1660, 1934
PctI	GAATGC	1 cut(s)	1354
PfeI	GAWTC	1 cut(s)	382
PflMI	CCANNNNNTGG	1 cut(s)	1211
PfoI	TCCNGGA	1 cut(s)	1429
PkrI	GCNGC	1 cut(s)	1187
PleI	GAGTC	5 cut(s)	115, 497, 1051, 1147, 1598
PpsI	GAGTC	5 cut(s)	115, 497, 1051, 1147, 1598
PscI	ACATGT	3 cut(s)	517, 1660, 1934
Psp1406I	AACGTT	1 cut(s)	1483
Psp6I	CCWGG	3 cut(s)	265, 1210, 1429
PspFI	CCCAGC	1 cut(s)	1131
PspGI	CCWGG	3 cut(s)	265, 1210, 1429
PspPI	GGNCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
PsrI	GAACNNNNNNTAC	2 cut(s)	911, 943
PsuI	RGATCY	3 cut(s)	850, 1146, 1437
RsaI	GTAC	5 cut(s)	878, 946, 1033, 1273, 1862
RsaNI	GTAC	5 cut(s)	877, 945, 1032, 1272, 1861
RseI	CAYNNNNRTG	5 cut(s)	522, 625, 654, 1212, 1904
SaqAI	TTAA	6 cut(s)	153, 165, 623, 1335, 1842, 1851
SatI	GCNGC	1 cut(s)	1186
Sau3AI	GATC	4 cut(s)	850, 1146, 1437, 1714
Sau96I	GGNCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
ScaI	AGTACT	1 cut(s)	946
SchI	GAGTC	5 cut(s)	116, 497, 1052, 1148, 1598
ScrFI	CCNGG	4 cut(s)	85, 267, 1212, 1431
SfaNI	GCATC	7 cut(s)	70, 348, 617, 658, 876, 1009, 1582
SfcI	CTRYAG	1 cut(s)	1265
Sfr274I	CTCGAG	1 cut(s)	312
SfuI	TTCGAA	2 cut(s)	547, 665
SinI	GGWCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
SlaI	CTCGAG	1 cut(s)	312
SmiMI	CAYNNNNRTG	5 cut(s)	522, 625, 654, 1212, 1904
SmlI	CTYRAG	3 cut(s)	312, 413, 1835
SmoI	CTYRAG	3 cut(s)	312, 413, 1835
SpeI	ACTAGT	1 cut(s)	754
SsiI	CCGC	4 cut(s)	613, 940, 1185, 1507
SspMI	CTAG	5 cut(s)	251, 747, 755, 924, 1544
StyD4I	CCNGG	4 cut(s)	83, 265, 1210, 1429
StyI	CCWWGG	1 cut(s)	999
TaaI	ACNGT	4 cut(s)	18, 544, 1540, 1754
TaiI	ACGT	2 cut(s)	405, 1486
TaqI	TCGA	9 cut(s)	36, 192, 313, 437, 547, 665, 1041, 1137, 1786
TaqII	GACCGA	1 cut(s)	1616
TatI	WGTACW	1 cut(s)	944
TauI	GCSGC	1 cut(s)	1188
TfiI	GAWTC	1 cut(s)	382
Tru1I	TTAA	6 cut(s)	153, 165, 623, 1335, 1842, 1851
Tru9I	TTAA	6 cut(s)	153, 165, 623, 1335, 1842, 1851
TscAI	CASTG	7 cut(s)	21, 529, 791, 1167, 1202, 1807, 1933
TseFI	GTSAC	3 cut(s)	495, 1199, 1754
Tsp45I	GTSAC	3 cut(s)	495, 1199, 1754
TspGWI	ACGGA	4 cut(s)	44, 587, 1139, 1666
TspRI	CASTG	7 cut(s)	21, 529, 791, 1167, 1202, 1807, 1933
Van91I	CCANNNNNTGG	1 cut(s)	1211
VpaK11BI	GGWCC	7 cut(s)	5, 23, 296, 574, 592, 1669, 1793
XagI	CCTNNNNNAGG	1 cut(s)	1612
XapI	RAATTY	4 cut(s)	200, 579, 1331, 1909
XbaI	TCTAGA	1 cut(s)	1543
XceI	RCATGY	4 cut(s)	521, 1192, 1664, 1938
XhoI	CTCGAG	1 cut(s)	312
XmiI	GTMKAC	1 cut(s)	751
XspI	CTAG	5 cut(s)	251, 747, 755, 924, 1544
ZrmI	AGTACT	1 cut(s)	946
Zsp2I	ATGCAT	2 cut(s)	632, 742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.