Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0009014

Physical Location & Seq

Genomic Coordinates Forward (+)

3589548 .. 3595334

Gene Structure 5787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0046800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3309 bp

ATGGAGTGCAACAAAGAGGAGGCGGTCAGAGCAATGCAACTTTCAGAAACAAATGTGCAAAACAAAGATTATATAGGAGCAATGAAGATGGCACAAAAGGCTCAGAGACTCTTCCCTGATCTCGAAAACATTTCTCGGTTACTTACGGTATGTGAAGTTCACTGTACAGCAGAAAACAAGCTAGGTGGATCCGAAATGGATTGGTACGGAATTCTTCAGATTCAACAATTTGATAATGATGTCACCATCAAGAAACAGTATAGAAAATTGGCACTTTTGCTTCATCCTGATAAGAATAAGTTTGCTGGTTCGGAGGCTGCTTTTAAGCTGATTGGGGAAGCAAACAGGGTGCTGTCGGACAAACAAAAACGTTCTATATATGACATTAAGTATAGAACTTTAGCAAGACCTGGTGGACCAAAAACAACAGCTCATCAGTCAAATATTGATTTCTTTGCTGCAACCAATTCTCGGAATAATCCTCAGTCACCTGTGCAACCAAACACATTCTGGACACAGTGCTACTATTGTTTCTCAAAGTTTCAATACTATAGAGACTTTCTGGGTCGGTTGCTCCGTTGTCAAAGATGCCGGAAAGCATTTGAAGCTCATGAATTTCGGGAAGGTGTGCATCCAGAATCTTTCAGAAATGACTTTCCGAATCATAAAGAGCCGCCAAGTCAGGGTCCTTCAAACGTAGCCTCACAAAGTAATGGAGGAACTGAAAAAGGAAATTTCACAAGATTTCAGAATGGAGATGCAGCCTTCAAACCTGCGTCAAAGGTAGGAACTTCTGCTGACTTGAGTGGGGCTTCTGACGCTGAAAAGAAAGATATTTGGCGTGGGGTTGAAGTGGGGAAGCAAGGTGTTGAAACATCTAAATTTGGTCCAGTGAAGTCCAAAGATACAATAACTTCTAGAAATATGAACAAAGAAAGAGAGAATTCAACTTTTGAATTTAGAGAAAGTTTGAAGACTGGAAATAGAGCTACAGCTGATACTGAACGTGCTGCTAAAAAGAAGAATGATAGTGTTTCTGAACTCGGTGGAGGCCGTCACCCTAGGAGATCTCCAAGGAACAAGCATAATCTTTCATCCCTCCTAGATGACAAGGATGATGATGATTTTGTGAGTCCCCCATTCAAAAGGTTGAGGAAGGGCCAATTGTTTAGTGCTGCTGAGGAGGGAAATAATGCAACTGTTGGTGGACATAAGAAAAATACAAGAGAAAAAGTAAGTTTTCCTCTAGAAGAAAATTTGCCAAAGAAGAAGAGTAAAACTGAGGAATTTGAGTTGACGGTAAAGGGAGCCGCCATGTCAGATCATGATGAAAGCAACTTCAAAGCTGATTTCAGTCCTGTAGCTAATGTAGATGTTGCATCCACTCCGGGAGCCATTGAAGTACCTGATCCTCAATTCCATAAGTTTGTGCTTGATGAAGATAGTTTACCAAGTCTTTTTGAAGCCAATCAAATTTGGGCTCTTTATGATCCAGCAGATGACATGCCCAGATACTATGCTTTTGTCAAGAAGGTCCTCACCCCTGGATTTAAGCTGAAAATCAGATGGCTGGAGGCCAATCCAGATGACCAAGGTGAGATTGATTGGTCCGAGAAGGAGTTGCCAGTTGCTTGTGGCAAGTTCAAACTTGGGAAAACTCAAGAAATTAAAGGTCATCTTATGTTTTCTCATCAGATGCACTACAGAAAAGGAAGTGATAAAAAGTCTATTCTGGTATATCCTAGGAAGGGAGAAACTTGGGCCATGTACCAGAATTGGGATATTGGATGGAGTTCTGAGCCGGAAAAGCACATGCCCCACAAATATGAATTTGTTGAAGTCTTGTCTGATTTTGTCGAAGCTTTTGGAATTGGAGTTCGTTATTTAGGCAAAGTGAAAGGATTTGTCAGTTTATTTCAGCCAACTGAGCAGCACGGGGTTGTCATGTTTCAAGTACCAACTCATGAGCTGTACAGATTTTCTCATCAGATTCCCTCTTTCAAGATGACTGGTTGTGAAGGATCTGGTGTTCCCCCAGGATCCTTTGAGCTTGATCCTGCTTCTTTGCCCACCAGTATTTTTGATTCAAGTGATCTAGGTAACTTGGAAATGGATGACAGAAGCAAGAAAACTGAAACTGATGGTACGTCTTGTGAAAGGGTTGGTTCTGTAACTGCATGCACAGGTATGAAGCAGGAGAAGAAGCTTTCTGAAAGAGAGACTTTGATGTCTAGATCTCCGAGAGAGTCAGATACTGAATTTGTGAATTGTATGAAAGGGAAGCGCATGACAAACCTAAACCATGGAAACCTCACACAACCCGAGGAAAGTGCTATTCCATGTCAAGCAGATAAGAGAAACGACACACAGAAGAAGCATCAGAAGAATGATTCGGATAAAGAAAGTTTTAGTCTTAGAAGATCACCAAGGGAATTAAGCAAGAACAGTACCCCATCAAACGGAGCTATGAAGTGTCCAGATTCTGCCAAGGATGACGGCCATGTCAGCTTCCCTCAGTCTAAAGTAAACTCTACCTCCAGCCAGTATAATAACAGGATGCATTCAACTCTGAAGGATCACCATACTCCCAGTCTCATGAAAAACCTTGTAGCCCCTCCTCCATCTTCATCACCTGCCTGCAGATTGTCCCAGACTGAATTCTACGACTTCAAAGGGCTAAAATCTCAGGAGAAATTTAGTCTTGGTCAAATTTGGGCTCTGTATAGTGACCGAAATGGGATGCCTAATACTTATGCTCAAGTTAAGAGGATTGAGGTTAGGCCAAATTTTCAAGTGCATATGGCAGTGCTGGAACCTTGCTCAGAACCGGAAAATTTGTCTGGACCAGTTTCCTGTGGGACATTTAGATTGAAAAATTGCCCAACTGAGGTCTTCCCCCTCTCTTCATTTTCCCACTGCTTAAATACCAGAAATGTTGTTGGTAGGAAGGTGTTTGACATACAACCCAAGGAAGGTGAGGTTTGGGCTCTATACAAGAACCACAATCCTGAGCCGACTTGTCCCAACCTGGGCAAGGGTGAATGTGAAATAGTGGAAGTGCGGGGAAATAGTGGAAGAAGCACAAAGGTTGGAGTTCTGGTAAAGGTTGAAGGGTTTAAATCAATATTCAAGGCTCCAAGAATCCAGAGATCAAAAACTGGGATCATTGATGTACCGCGGTCTGAGTTTCATAGATTTTCTCACCAGATTCCTGCTTTCCAGCATAGCGGGGAGAGTGACAGTCGACTTGCAGGCTGTTGGGAGCTTGATCCATCATCAATACCTGGTACTGTAATTTCCTTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009987 GO:0010228 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OSR1_C Pkinase

Protein Analysis

1102

Amino Acids

124.03

Weight (kDa)

8.7

Isoelectric Point (pI)

45.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	67 - 128	8e-20	DnaJ domain
DUF3444	PF11926	465 - 672	9.7e-78	Domain of unknown function (DUF3444)
DUF3444	PF11926	881 - 1078	5.5e-49	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51630 AT3G51630
fragaria_vesca	FvH4_6g10120
malus_domestica	MD04G1172700.v1.1 MD12G1186000.v1.1
prunus_persica	Prupe.4G073500_v2.0.a1 Prupe.6G291500_v2.0.a1
pyrus_communis	pycom04g15260 pycom12g17460
rosa_chinensis	RchiOBHm_Chr3g0460821
rosa_laevigata	RLG00000024978
rosa_multiflora	Rmu_sc0007678.1_g000013
rosa_roxburghii	Rroxscaffold_6G00419190
rosa_rugosa	Rorug03G0046600 Rorug03G0046700 Rorug03G0046800 Rorug03G0046800
rosa_samantha	Rh3AG103700 Rh3BG107400 Rh3CG109300 Rh3DG109200
rosa_wichuraiana	Rw3G008830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2641
AasI	GACNNNNNNGTC	2 cut(s)	2227, 2501
Acc36I	ACCTGC	2 cut(s)	781, 2641
AccI	GTMKAC	1 cut(s)	3244
AccII	CGCG	1 cut(s)	3178
AciI	CCGC	7 cut(s)	23, 674, 1311, 3061, 3176, 3178, 3228
AclI	AACGTT	1 cut(s)	370
AcoI	YGGCCR	1 cut(s)	2497
AcuI	CTGAAG	2 cut(s)	200, 2591
AfiI	CCNNNNNNNGG	9 cut(s)	471, 683, 1748, 1777, 2459, 2887, 2972, 3029, 3034
AjnI	CCWGG	5 cut(s)	409, 1543, 2035, 3027, 3283
AloI	GAACNNNNNNTCC	4 cut(s)	1860, 1892, 2013, 2045
Alw26I	GTCTC	4 cut(s)	100, 549, 2213, 2597
AlwNI	CAGNNNCTG	2 cut(s)	2255, 2483
Ama87I	CYCGRG	1 cut(s)	2321
AoxI	GGCC	6 cut(s)	1051, 1159, 1575, 1761, 2497, 2780
ApeKI	GCWGC	6 cut(s)	317, 458, 761, 1010, 1175, 1930
AspA2I	CCTAGG	2 cut(s)	1061, 1742
AspLEI	GCGC	1 cut(s)	2286
AspS9I	GGNCC	8 cut(s)	416, 686, 887, 1159, 1534, 1608, 1761, 2843
AsuC2I	CCSGG	1 cut(s)	1389
AvaI	CYCGRG	1 cut(s)	2321
AvaII	GGWCC	6 cut(s)	416, 686, 887, 1534, 1608, 2843
AvrII	CCTAGG	2 cut(s)	1061, 1742
BamHI	GGATCC	2 cut(s)	188, 2039
BanII	GRGCYC	3 cut(s)	1483, 2719, 2989
BarI	GAAGNNNNNNTAC	2 cut(s)	1431, 1463
BbsI	GAAGAC	2 cut(s)	980, 2884
BbvCI	CCTCAGC	1 cut(s)	1179
BbvI	GCAGC	6 cut(s)	304, 445, 773, 997, 1162, 1942
BccI	CCATC	8 cut(s)	82, 254, 1560, 1782, 2135, 2461, 2629, 3280
BceAI	ACGGC	2 cut(s)	1038, 2512
BcgI	CGANNNNNNTGC	2 cut(s)	2312, 2346
BciT130I	CCWGG	5 cut(s)	411, 1545, 2037, 3029, 3285
BcnI	CCSGG	1 cut(s)	1389
BcoDI	GTCTC	4 cut(s)	100, 549, 2213, 2597
BfaI	CTAG	8 cut(s)	182, 918, 1062, 1103, 1247, 1743, 2096, 2232
BfmI	CTRYAG	5 cut(s)	550, 990, 1359, 1702, 2638
BfuAI	ACCTGC	2 cut(s)	781, 2641
BglII	AGATCT	2 cut(s)	1067, 2234
BisI	GCNGC	8 cut(s)	318, 459, 674, 762, 1011, 1176, 1311, 1931
BlnI	CCTAGG	2 cut(s)	1061, 1742
BlsI	GCNGC	8 cut(s)	319, 460, 675, 763, 1012, 1177, 1312, 1932
Bme1390I	CCNGG	6 cut(s)	411, 1389, 1545, 2037, 3029, 3285
Bme18I	GGWCC	6 cut(s)	416, 686, 887, 1534, 1608, 2843
BmeT110I	CYCGRG	1 cut(s)	2321
BmgT120I	GGNCC	8 cut(s)	416, 686, 887, 1159, 1534, 1608, 1761, 2843
BmiI	GGNNCC	7 cut(s)	190, 687, 1309, 1393, 2041, 2814, 3135
BmrFI	CCNGG	6 cut(s)	411, 1389, 1545, 2037, 3029, 3285
BmrI	ACTGGG	2 cut(s)	2583, 3168
BmsI	GCATC	8 cut(s)	578, 640, 748, 1388, 1686, 2386, 2547, 2730
BmuI	ACTGGG	2 cut(s)	2583, 3168
BpiI	GAAGAC	2 cut(s)	980, 2884
BpmI	CTGGAG	2 cut(s)	1592, 2521
Bpu10I	CCTNAGC	2 cut(s)	1179, 3009
BpuEI	CTTGAG	3 cut(s)	823, 1644, 2742
BpuMI	CCSGG	1 cut(s)	1389
BsaWI	WCCGGW	1 cut(s)	2827
BsaXI	ACNNNNNCTCC	4 cut(s)	2519, 2549, 3084, 3114
Bsc4I	CCNNNNNNNGG	9 cut(s)	471, 683, 1748, 1777, 2459, 2887, 2972, 3029, 3034
Bse1I	ACTGG	9 cut(s)	890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
Bse3DI	GCAATG	2 cut(s)	39, 87
BseBI	CCWGG	5 cut(s)	411, 1545, 2037, 3029, 3285
BseLI	CCNNNNNNNGG	9 cut(s)	471, 683, 1748, 1777, 2459, 2887, 2972, 3029, 3034
BseMI	GCAATG	2 cut(s)	39, 87
BseNI	ACTGG	9 cut(s)	890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
BseRI	GAGGAG	3 cut(s)	32, 1196, 2607
BseXI	GCAGC	6 cut(s)	304, 445, 773, 997, 1162, 1942
Bsh1236I	CGCG	1 cut(s)	3178
BshFI	GGCC	6 cut(s)	1053, 1161, 1577, 1763, 2499, 2782
BsiHKCI	CYCGRG	1 cut(s)	2321
BsiSI	CCGG	4 cut(s)	592, 1388, 1802, 2828
BslFI	GGGAC	4 cut(s)	1119, 2632, 2872, 3006
BslI	CCNNNNNNNGG	9 cut(s)	471, 683, 1748, 1777, 2459, 2887, 2972, 3029, 3034
BsmAI	GTCTC	4 cut(s)	100, 549, 2213, 2597
BsmFI	GGGAC	4 cut(s)	1119, 2632, 2872, 3006
BsmI	GAATGC	1 cut(s)	2560
BsnI	GGCC	6 cut(s)	1053, 1161, 1577, 1763, 2499, 2782
BsoBI	CYCGRG	1 cut(s)	2321
Bsp1286I	GDGCHC	3 cut(s)	1483, 2719, 2989
Bsp1407I	TGTACA	2 cut(s)	164, 1971
Bsp19I	CCATGG	1 cut(s)	2302
BspACI	CCGC	7 cut(s)	23, 674, 1311, 3061, 3176, 3178, 3228
BspANI	GGCC	6 cut(s)	1053, 1161, 1577, 1763, 2499, 2782
BspFNI	CGCG	1 cut(s)	3178
BspHI	TCATGA	4 cut(s)	610, 1324, 1963, 2595
BspLI	GGNNCC	7 cut(s)	190, 687, 1309, 1393, 2041, 2814, 3135
BspMAI	CTGCAG	1 cut(s)	2642
BspMI	ACCTGC	2 cut(s)	781, 2641
BsrDI	GCAATG	2 cut(s)	39, 87
BsrGI	TGTACA	2 cut(s)	164, 1971
BsrI	ACTGG	9 cut(s)	890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
BssT1I	CCWWGG	8 cut(s)	1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967
Bst2UI	CCWGG	5 cut(s)	411, 1545, 2037, 3029, 3285
Bst4CI	ACNGT	9 cut(s)	148, 164, 258, 519, 1201, 1300, 2447, 3242, 3292
Bst6I	CTCTTC	3 cut(s)	116, 1265, 2908
BstAUI	TGTACA	2 cut(s)	164, 1971
BstC8I	GCNNGC	3 cut(s)	2179, 2638, 3253
BstDSI	CCRYGG	2 cut(s)	2302, 3176
BstENI	CCTNNNNNAGG	1 cut(s)	3032
BstFNI	CGCG	1 cut(s)	3178
BstHHI	GCGC	1 cut(s)	2286
BstMAI	GTCTC	4 cut(s)	100, 549, 2213, 2597
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 98, 605, 818, 1807, 1927, 2505
BstNI	CCWGG	5 cut(s)	411, 1545, 2037, 3029, 3285
BstNSI	RCATGY	3 cut(s)	1507, 1816, 2181
BstSCI	CCNGG	6 cut(s)	409, 1387, 1543, 2035, 3027, 3283
BstSFI	CTRYAG	5 cut(s)	550, 990, 1359, 1702, 2638
BstUI	CGCG	1 cut(s)	3178
BstV1I	GCAGC	6 cut(s)	304, 445, 773, 997, 1162, 1942
BstV2I	GAAGAC	2 cut(s)	980, 2884
BstX2I	RGATCY	5 cut(s)	188, 1067, 2021, 2039, 2234
BstYI	RGATCY	5 cut(s)	188, 1067, 2021, 2039, 2234
BsuRI	GGCC	6 cut(s)	1053, 1161, 1577, 1763, 2499, 2782
BtgI	CCRYGG	2 cut(s)	2302, 3176
BtsI	GCAGTG	2 cut(s)	2811, 2914
BtsIMutI	CAGTG	5 cut(s)	160, 524, 897, 2811, 2914
BveI	ACCTGC	2 cut(s)	781, 2641
Cac8I	GCNNGC	3 cut(s)	2179, 2638, 3253
CaiI	CAGNNNCTG	2 cut(s)	2255, 2483
CciI	TCATGA	4 cut(s)	610, 1324, 1963, 2595
CfoI	GCGC	1 cut(s)	2286
Cfr13I	GGNCC	8 cut(s)	416, 686, 887, 1159, 1534, 1608, 1761, 2843
Cfr42I	CCGCGG	1 cut(s)	3179
CseI	GACGC	2 cut(s)	765, 827
CsiI	ACCWGGT	2 cut(s)	409, 3283
CspCI	CAANNNNNGTGG	2 cut(s)	166, 201
DraI	TTTAAA	1 cut(s)	3118
DrdI	GACNNNNNNGTC	2 cut(s)	2227, 2501
DseDI	GACNNNNNNGTC	2 cut(s)	2227, 2501
EaeI	YGGCCR	1 cut(s)	2497
Eam1104I	CTCTTC	3 cut(s)	116, 1265, 2908
EarI	CTCTTC	3 cut(s)	116, 1265, 2908
Eco130I	CCWWGG	8 cut(s)	1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967
Eco24I	GRGCYC	3 cut(s)	1483, 2719, 2989
Eco47I	GGWCC	6 cut(s)	416, 686, 887, 1534, 1608, 2843
Eco57I	CTGAAG	2 cut(s)	200, 2591
Eco88I	CYCGRG	1 cut(s)	2321
EcoNI	CCTNNNNNAGG	1 cut(s)	3032
EcoO109I	RGGNCCY	2 cut(s)	686, 1534
EcoRI	GAATTC	3 cut(s)	210, 943, 2657
EcoRII	CCWGG	5 cut(s)	409, 1543, 2035, 3027, 3283
EcoT14I	CCWWGG	8 cut(s)	1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967
EcoT22I	ATGCAT	1 cut(s)	2562
EcoT38I	GRGCYC	3 cut(s)	1483, 2719, 2989
ErhI	CCWWGG	8 cut(s)	1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967
FalI	AAGNNNNNCTT	4 cut(s)	1662, 1694, 2206, 2238
FaqI	GGGAC	4 cut(s)	1119, 2632, 2872, 3006
FauI	CCCGC	2 cut(s)	3054, 3221
FauNDI	CATATG	1 cut(s)	2799
FblI	GTMKAC	1 cut(s)	3244
Fnu4HI	GCNGC	8 cut(s)	318, 459, 674, 762, 1011, 1176, 1311, 1931
FriOI	GRGCYC	3 cut(s)	1483, 2719, 2989
Fsp4HI	GCNGC	8 cut(s)	318, 459, 674, 762, 1011, 1176, 1311, 1931
FspBI	CTAG	8 cut(s)	182, 918, 1062, 1103, 1247, 1743, 2096, 2232
GlaI	GCGC	1 cut(s)	2285
GluI	GCNGC	8 cut(s)	318, 459, 674, 762, 1011, 1176, 1311, 1931
GsuI	CTGGAG	2 cut(s)	1592, 2521
HaeIII	GGCC	6 cut(s)	1053, 1161, 1577, 1763, 2499, 2782
HapII	CCGG	4 cut(s)	592, 1388, 1802, 2828
HgaI	GACGC	2 cut(s)	765, 827
HhaI	GCGC	1 cut(s)	2286
Hin6I	GCGC	1 cut(s)	2284
HinP1I	GCGC	1 cut(s)	2284
HincII	GTYRAC	2 cut(s)	1296, 3245
HindII	GTYRAC	2 cut(s)	1296, 3245
HindIII	AAGCTT	2 cut(s)	1860, 2204
HpaII	CCGG	4 cut(s)	592, 1388, 1802, 2828
Hpy166II	GTNNAC	7 cut(s)	160, 416, 1208, 1296, 1448, 2527, 3245
Hpy8I	GTNNAC	7 cut(s)	160, 416, 1208, 1296, 1448, 2527, 3245
HpyCH4III	ACNGT	9 cut(s)	148, 164, 258, 519, 1201, 1300, 2447, 3242, 3292
HpyCH4IV	ACGT	4 cut(s)	370, 696, 1006, 2147
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 98, 605, 818, 1807, 1927, 2505
HpySE526I	ACGT	4 cut(s)	370, 696, 1006, 2147
HspAI	GCGC	1 cut(s)	2284
KspI	CCGCGG	1 cut(s)	3179
LmnI	GCTCC	7 cut(s)	77, 579, 1307, 1391, 2462, 3139, 3262
Lsp1109I	GCAGC	6 cut(s)	304, 445, 773, 997, 1162, 1942
LweI	GCATC	8 cut(s)	578, 640, 748, 1388, 1686, 2386, 2547, 2730
MabI	ACCWGGT	2 cut(s)	409, 3283
MaeI	CTAG	8 cut(s)	182, 918, 1062, 1103, 1247, 1743, 2096, 2232
MaeII	ACGT	4 cut(s)	370, 696, 1006, 2147
MaeIII	GTNAC	8 cut(s)	138, 241, 486, 1055, 2099, 2170, 2726, 3236
MfeI	CAATTG	1 cut(s)	1163
MflI	RGATCY	5 cut(s)	188, 1067, 2021, 2039, 2234
MhlI	GDGCHC	3 cut(s)	1483, 2719, 2989
MlyI	GAGTC	3 cut(s)	102, 1141, 2255
MmeI	TCCRAC	2 cut(s)	336, 3070
Mph1103I	ATGCAT	1 cut(s)	2562
MseI	TTAA	8 cut(s)	324, 387, 1551, 1668, 2435, 2763, 2921, 3117
MslI	CAYNNNNRTG	2 cut(s)	1824, 2186
MspA1I	CMGCKG	2 cut(s)	995, 3178
MspI	CCGG	4 cut(s)	592, 1388, 1802, 2828
MspR9I	CCNGG	6 cut(s)	411, 1389, 1545, 2037, 3029, 3285
MunI	CAATTG	1 cut(s)	1163
Mva1269I	GAATGC	1 cut(s)	2560
MvaI	CCWGG	5 cut(s)	411, 1545, 2037, 3029, 3285
MvnI	CGCG	1 cut(s)	3178
MwoI	GCNNNNNNNGC	7 cut(s)	29, 98, 605, 818, 1807, 1927, 2505
NciI	CCSGG	1 cut(s)	1389
NcoI	CCATGG	1 cut(s)	2302
NdeI	CATATG	1 cut(s)	2799
NlaIV	GGNNCC	7 cut(s)	190, 687, 1309, 1393, 2041, 2814, 3135
NmuCI	GTSAC	5 cut(s)	241, 486, 1055, 2726, 3236
NsiI	ATGCAT	1 cut(s)	2562
NspI	RCATGY	3 cut(s)	1507, 1816, 2181
PaeI	GCATGC	1 cut(s)	2181
PagI	TCATGA	4 cut(s)	610, 1324, 1963, 2595
PaqCI	CACCTGC	1 cut(s)	2641
PcsI	WCGNNNNNNNCGW	1 cut(s)	574
PctI	GAATGC	1 cut(s)	2560
PfeI	GAWTC	9 cut(s)	220, 638, 661, 1990, 2084, 2390, 2480, 3141, 3208
PfoI	TCCNGGA	1 cut(s)	1387
PkrI	GCNGC	8 cut(s)	319, 460, 675, 763, 1012, 1177, 1312, 1932
PleI	GAGTC	3 cut(s)	102, 1140, 2254
PpsI	GAGTC	3 cut(s)	102, 1140, 2254
PpuMI	RGGWCCY	2 cut(s)	686, 1534
Psp1406I	AACGTT	1 cut(s)	370
Psp5II	RGGWCCY	2 cut(s)	686, 1534
Psp6I	CCWGG	5 cut(s)	409, 1543, 2035, 3027, 3283
PspGI	CCWGG	5 cut(s)	409, 1543, 2035, 3027, 3283
PspN4I	GGNNCC	7 cut(s)	190, 687, 1309, 1393, 2041, 2814, 3135
PspPI	GGNCC	8 cut(s)	416, 686, 887, 1159, 1534, 1608, 1761, 2843
PspPPI	RGGWCCY	2 cut(s)	686, 1534
PsrI	GAACNNNNNNTAC	2 cut(s)	141, 173
PstI	CTGCAG	1 cut(s)	2642
PstNI	CAGNNNCTG	2 cut(s)	2255, 2483
PsuI	RGATCY	5 cut(s)	188, 1067, 2021, 2039, 2234
PvuII	CAGCTG	1 cut(s)	995
RseI	CAYNNNNRTG	2 cut(s)	1824, 2186
SacII	CCGCGG	1 cut(s)	3179
SalI	GTCGAC	1 cut(s)	3243
SaqAI	TTAA	8 cut(s)	324, 387, 1551, 1668, 2435, 2763, 2921, 3117
SatI	GCNGC	8 cut(s)	318, 459, 674, 762, 1011, 1176, 1311, 1931
Sau96I	GGNCC	8 cut(s)	416, 686, 887, 1159, 1534, 1608, 1761, 2843
SchI	GAGTC	3 cut(s)	102, 1141, 2255
ScrFI	CCNGG	6 cut(s)	411, 1389, 1545, 2037, 3029, 3285
SduI	GDGCHC	3 cut(s)	1483, 2719, 2989
SexAI	ACCWGGT	2 cut(s)	409, 3283
SfaNI	GCATC	8 cut(s)	578, 640, 748, 1388, 1686, 2386, 2547, 2730
SfcI	CTRYAG	5 cut(s)	550, 990, 1359, 1702, 2638
Sfr303I	CCGCGG	1 cut(s)	3179
SgrBI	CCGCGG	1 cut(s)	3179
SinI	GGWCC	6 cut(s)	416, 686, 887, 1534, 1608, 2843
SmiMI	CAYNNNNRTG	2 cut(s)	1824, 2186
SmlI	CTYRAG	3 cut(s)	802, 1659, 2757
SmoI	CTYRAG	3 cut(s)	802, 1659, 2757
SphI	GCATGC	1 cut(s)	2181
SsiI	CCGC	7 cut(s)	23, 674, 1311, 3061, 3176, 3178, 3228
SspI	AATATT	2 cut(s)	445, 3126
SspMI	CTAG	8 cut(s)	182, 918, 1062, 1103, 1247, 1743, 2096, 2232
StyD4I	CCNGG	6 cut(s)	409, 1387, 1543, 2035, 3027, 3283
StyI	CCWWGG	8 cut(s)	1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967
TaaI	ACNGT	9 cut(s)	148, 164, 258, 519, 1201, 1300, 2447, 3242, 3292
TaiI	ACGT	4 cut(s)	373, 699, 1009, 2150
TaqI	TCGA	3 cut(s)	123, 1857, 3244
TaqII	GACCGA	1 cut(s)	2745
TatI	WGTACW	2 cut(s)	164, 1971
TauI	GCSGC	2 cut(s)	676, 1313
TfiI	GAWTC	9 cut(s)	220, 638, 661, 1990, 2084, 2390, 2480, 3141, 3208
Tru1I	TTAA	8 cut(s)	324, 387, 1551, 1668, 2435, 2763, 2921, 3117
Tru9I	TTAA	8 cut(s)	324, 387, 1551, 1668, 2435, 2763, 2921, 3117
TscAI	CASTG	5 cut(s)	167, 524, 897, 2811, 2921
TseFI	GTSAC	5 cut(s)	241, 486, 1055, 2726, 3236
TseI	GCWGC	6 cut(s)	317, 458, 761, 1010, 1175, 1930
Tsp45I	GTSAC	5 cut(s)	241, 486, 1055, 2726, 3236
TspGWI	ACGGA	3 cut(s)	222, 566, 2475
TspRI	CASTG	5 cut(s)	167, 524, 897, 2811, 2921
VpaK11BI	GGWCC	6 cut(s)	416, 686, 887, 1534, 1608, 2843
XagI	CCTNNNNNAGG	1 cut(s)	3032
XbaI	TCTAGA	3 cut(s)	917, 1246, 2231
XceI	RCATGY	3 cut(s)	1507, 1816, 2181
XcmI	CCANNNNNNNNNTGG	1 cut(s)	507
XmaJI	CCTAGG	2 cut(s)	1061, 1742
XmiI	GTMKAC	1 cut(s)	3244
XspI	CTAG	8 cut(s)	182, 918, 1062, 1103, 1247, 1743, 2096, 2232
Zsp2I	ATGCAT	1 cut(s)	2562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.