Rorug03G0133400

YLS9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0014763
Physical Location & Seq
Reverse (-)
10894910 .. 10898569
3660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0133400.1

Sequence Viewer

Length: 1434 bp
ATGAACGGGAACGAGGACGTGAAGATGGAGAATCGCAGAGAAGCTTTGGTGTATATGTCGGGATATTTACCGGGTGTCTCGCCGGAAAAGTCGCCGATGCTGTCACTGGAGCCGGTCCAGTTTCCGAGTCCCGTGGACGGTGGAGATTCGTGGAGGGACGTCTGCGGTGGCGGTTGTGGATTCGCTATGGCCATCTCAGAGAGTGGGAAACTGATAACTTGGGGATCGGCGGATGAGGAAGGACAGAGCTACTTGGTTGCGGGGAAGCATGGGGAGACTCCAGGGACATTTCCTCTCCCAACTGAAGTCTCACTGGTCAAGGCTGCTGCTGGTTGGGCCCATTGTGTTTCTGTTACAGAGGCTGGTGAAGTATATACATGGGGGTGGAAAGAGTGTGTTCCCTCGGGGAAGGTATTCCATGATTTGGCTTTGGTGGGAAGTATTGACAAGGATGCTACAACTACCGGGAAACTAAGTTCATTACCAGCTGAACAAGGAAGATCATTGTCTCAAGGCTTCAATTTTAGTGGTGAGACAGTATCTCATCTTGACAGCAAAAGGGCCGGAGAGGAAATTGCAAAGCGAAGGAAAACTTCGTCAGCTAAATTAGAACCTGAAAGCTCAACAGCAGCTGATGAACTCTTCATCGCATCGCCTTGTCTTGTAACAATGGGTCATGGTGTGAGGATCACTACAGTTGCTGCTGGCGGACGCCACACTTTAGCATTATCAGATATGGGACAGGTTTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCACGGATGAAGATGGTCTCTTCTCCTCATCTCATACCCTGCATCGATCAATCTGCTTCTGGGAAGGACAGGTTTTCTGCAGTATCTCAAGGATCAAAATTTCCTGGAAGTTATGTGAAGGAAATCGCTTGTGGGGGTCGACATAGTGCAGTAATAACAGATGCAGGAGCACTGCTTACTTTTGGCTGGGGCCTGTATGGACAGTGTGGGCAAGGGAATACGAAAGATCAGCTAAAAGTTACTCGTGTGGAGTCATTAGTGGATACTAGAGTGAAAAGTATAGCTGCTGGACTATGGCATACTCTCTGTATATCTGTTGATGGCCGTGTATATGCTTTTGGGGGTAATCAGTTTGGACAATTGGGAACAGGTGCTGAGGAAGCTGAGACTCTACCTAGGCTTCTGAACTCTTCAAGTCTGGAAAATAAGCATGCCAAAGCAGTTTCCTGTGGAGCACGCCATAGTACTATACTGACGGAAGATGGTCAGTTATTTAGCTGGGGATGGAACAAGTATGGGCAGCTTGGTCTGGGTGATTCTGTGGATAGGAACATTCCTTGTCAAGTTTCTATAGATGGCTGCTTGCCTAAGCATATTGCATGTGGCTGGTGGCACACACTATTGCTGGCGGAAATACCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

477

Amino Acids

50.57

Weight (kDa)

5.93

Isoelectric Point (pI)

43.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 42 - 132 5.4e-12 RCC1-like domain
WD40_RLD PF25390 226 - 472 3.8e-57 RCC1-like domain
RCC1_2 PF13540 230 - 259 1.1e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 247 - 315 1.4e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 302 - 331 7e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 319 - 367 1.1e-09 Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD PF25384 321 - 404 6.1e-07 Alsin RCC1-like domain
RCC1_2 PF13540 354 - 383 3.4e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 370 - 421 4.1e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 409 - 437 2.5e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 424 - 472 2.7e-15 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 162
AccB7I CCANNNNNTGG 1 cut(s) 424
AccI GTMKAC 1 cut(s) 928
AciI CCGC 6 cut(s) 165, 171, 230, 260, 708, 1418
AclWI GGATC 3 cut(s) 232, 695, 889
AcoI YGGCCR 2 cut(s) 189, 1111
AcsI RAATTY 1 cut(s) 887
AcuI CTGAAG 1 cut(s) 324
AcyI GRCGYC 2 cut(s) 159, 712
AfaI GTAC 1 cut(s) 1255
AfiI CCNNNNNNNGG 2 cut(s) 137, 424
AgsI TTSAA 2 cut(s) 520, 1203
AjiI CACGTC 1 cut(s) 19
AjnI CCWGG 2 cut(s) 280, 892
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
Alw21I GWGCWC 2 cut(s) 961, 1246
Alw26I GTCTC 7 cut(s) 82, 269, 313, 513, 527, 811, 1169
AlwI GGATC 3 cut(s) 232, 695, 889
AlwNI CAGNNNCTG 4 cut(s) 362, 632, 701, 1163
Ama87I CYCGRG 1 cut(s) 403
AoxI GGCC 5 cut(s) 189, 336, 561, 979, 1111
ApaI GGGCCC 1 cut(s) 340
ApeKI GCWGC 7 cut(s) 323, 326, 629, 701, 1073, 1309, 1368
ApoI RAATTY 1 cut(s) 887
Asp700I GAANNNNTTC 1 cut(s) 413
AspA2I CCTAGG 1 cut(s) 1184
AspS9I GGNCC 5 cut(s) 115, 336, 337, 561, 979
AsuC2I CCSGG 2 cut(s) 72, 466
AsuHPI GGTGA 3 cut(s) 377, 542, 1334
AvaI CYCGRG 1 cut(s) 403
AvaII GGWCC 1 cut(s) 115
AvrII CCTAGG 1 cut(s) 1184
BaeGI GKGCMC 1 cut(s) 340
BaeI ACNNNNGTAYC 2 cut(s) 1044, 1077
BalI TGGCCA 1 cut(s) 191
BanII GRGCYC 1 cut(s) 340
BauI CACGAG 1 cut(s) 1032
Bbv12I GWGCWC 2 cut(s) 961, 1246
BbvCI CCTCAGC 1 cut(s) 1164
BbvI GCAGC 7 cut(s) 310, 313, 641, 688, 1060, 1321, 1355
BccI CCATC 7 cut(s) 19, 200, 796, 1103, 1265, 1287, 1358
BceAI ACGGC 1 cut(s) 1098
BcgI CGANNNNNNTGC 2 cut(s) 824, 858
BciT130I CCWGG 2 cut(s) 282, 894
BciVI GTATCC 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 72, 466
BcoDI GTCTC 7 cut(s) 82, 269, 313, 513, 527, 811, 1169
BfaI CTAG 3 cut(s) 779, 1056, 1185
BfmI CTRYAG 3 cut(s) 693, 867, 1359
BfuI GTATCC 1 cut(s) 1045
BisI GCNGC 7 cut(s) 324, 327, 630, 702, 1074, 1310, 1369
BlnI CCTAGG 1 cut(s) 1184
BlsI GCNGC 7 cut(s) 325, 328, 631, 703, 1075, 1311, 1370
BmcAI AGTACT 1 cut(s) 1255
Bme1390I CCNGG 4 cut(s) 72, 282, 466, 894
Bme18I GGWCC 1 cut(s) 115
BmeT110I CYCGRG 1 cut(s) 403
BmgBI CACGTC 1 cut(s) 19
BmgT120I GGNCC 5 cut(s) 115, 336, 337, 561, 979
BmiI GGNNCC 3 cut(s) 111, 338, 980
BmrFI CCNGG 4 cut(s) 72, 282, 466, 894
BmsI GCATC 5 cut(s) 87, 442, 659, 840, 940
BpmI CTGGAG 2 cut(s) 128, 264
Bpu10I CCTNAGC 2 cut(s) 1164, 1377
BpuEI CTTGAG 2 cut(s) 495, 861
BpuMI CCSGG 2 cut(s) 72, 466
Bsa29I ATCGAT 1 cut(s) 834
BsaHI GRCGYC 2 cut(s) 159, 712
BsaI GGTCTC 1 cut(s) 811
BsaJI CCNNGG 4 cut(s) 132, 281, 402, 1184
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 424
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 3 cut(s) 111, 118, 318
BseBI CCWGG 2 cut(s) 282, 894
BseCI ATCGAT 1 cut(s) 834
BseDI CCNNGG 4 cut(s) 132, 281, 402, 1184
BseGI GGATG 4 cut(s) 238, 457, 801, 1298
BseLI CCNNNNNNNGG 2 cut(s) 137, 424
BseMII CTCAG 3 cut(s) 210, 1155, 1164
BseNI ACTGG 3 cut(s) 111, 118, 318
BseRI GAGGAG 1 cut(s) 804
BseSI GKGCMC 1 cut(s) 340
BseXI GCAGC 7 cut(s) 310, 313, 641, 688, 1060, 1321, 1355
BseYI CCCAGC 2 cut(s) 975, 1287
BsgI GTGCAG 1 cut(s) 957
BshFI GGCC 5 cut(s) 191, 338, 563, 981, 1113
BshVI ATCGAT 1 cut(s) 834
BsiHKAI GWGCWC 2 cut(s) 961, 1246
BsiHKCI CYCGRG 1 cut(s) 403
BsiSI CCGG 5 cut(s) 71, 83, 113, 465, 564
BslFI GGGAC 4 cut(s) 114, 170, 298, 753
BslI CCNNNNNNNGG 2 cut(s) 137, 424
BsmAI GTCTC 7 cut(s) 82, 269, 313, 513, 527, 811, 1169
BsmFI GGGAC 4 cut(s) 114, 170, 298, 753
BsnI GGCC 5 cut(s) 191, 338, 563, 981, 1113
Bso31I GGTCTC 1 cut(s) 811
BsoBI CYCGRG 1 cut(s) 403
Bsp120I GGGCCC 1 cut(s) 336
Bsp1286I GDGCHC 3 cut(s) 340, 961, 1246
Bsp143I GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
BspACI CCGC 6 cut(s) 165, 171, 230, 260, 708, 1418
BspANI GGCC 5 cut(s) 191, 338, 563, 981, 1113
BspCNI CTCAG 3 cut(s) 209, 1156, 1165
BspDI ATCGAT 1 cut(s) 834
BspLI GGNNCC 3 cut(s) 111, 338, 980
BspMAI CTGCAG 1 cut(s) 871
BspPI GGATC 3 cut(s) 232, 695, 889
BspTNI GGTCTC 1 cut(s) 811
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 3 cut(s) 111, 118, 318
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 4 cut(s) 132, 281, 402, 1184
BssMI GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
BssNI GRCGYC 2 cut(s) 159, 712
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 1184
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 2 cut(s) 282, 894
Bst4CI ACNGT 4 cut(s) 140, 538, 697, 993
Bst6I CTCTTC 3 cut(s) 647, 814, 1204
BstACI GRCGYC 2 cut(s) 159, 712
BstC8I GCNNGC 5 cut(s) 706, 1221, 1246, 1373, 1416
BstDEI CTNAG 5 cut(s) 196, 473, 1164, 1173, 1377
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 4 cut(s) 238, 457, 801, 1298
BstKTI GATC 6 cut(s) 227, 503, 690, 838, 884, 1018
BstMAI GTCTC 7 cut(s) 82, 269, 313, 513, 527, 811, 1169
BstMBI GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
BstMWI GCNNNNNNNGC 3 cut(s) 335, 765, 1169
BstNI CCWGG 2 cut(s) 282, 894
BstNSI RCATGY 2 cut(s) 1223, 1392
BstSCI CCNGG 4 cut(s) 70, 280, 464, 892
BstSFI CTRYAG 3 cut(s) 693, 867, 1359
BstSLI GKGCMC 1 cut(s) 340
BstV1I GCAGC 7 cut(s) 310, 313, 641, 688, 1060, 1321, 1355
Bsu15I ATCGAT 1 cut(s) 834
BsuI GTATCC 1 cut(s) 1045
BsuRI GGCC 5 cut(s) 191, 338, 563, 981, 1113
BsuTUI ATCGAT 1 cut(s) 834
BtgI CCRYGG 1 cut(s) 132
BtgZI GCGATG 2 cut(s) 631, 636
BtrI CACGTC 1 cut(s) 19
BtsCI GGATG 4 cut(s) 238, 457, 801, 1298
BtsI GCAGTG 1 cut(s) 959
BtsIMutI CAGTG 4 cut(s) 104, 311, 959, 998
Cac8I GCNNGC 5 cut(s) 706, 1221, 1246, 1373, 1416
CaiI CAGNNNCTG 4 cut(s) 362, 632, 701, 1163
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 5 cut(s) 115, 336, 337, 561, 979
ClaI ATCGAT 1 cut(s) 834
CseI GACGC 1 cut(s) 720
Csp6I GTAC 1 cut(s) 1254
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviAII CATG 6 cut(s) 269, 378, 419, 677, 1220, 1389
CviQI GTAC 1 cut(s) 1254
DdeI CTNAG 5 cut(s) 196, 473, 1164, 1173, 1377
DpnI GATC 6 cut(s) 226, 502, 689, 837, 883, 1017
DpnII GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
EaeI YGGCCR 2 cut(s) 189, 1111
Eam1104I CTCTTC 3 cut(s) 647, 814, 1204
EarI CTCTTC 3 cut(s) 647, 814, 1204
EciI GGCGGA 3 cut(s) 245, 723, 1433
Eco130I CCWWGG 1 cut(s) 1184
Eco24I GRGCYC 1 cut(s) 340
Eco31I GGTCTC 1 cut(s) 811
Eco47I GGWCC 1 cut(s) 115
Eco57I CTGAAG 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 403
EcoO109I RGGNCCY 1 cut(s) 979
EcoRII CCWGG 2 cut(s) 280, 892
EcoT14I CCWWGG 1 cut(s) 1184
EcoT38I GRGCYC 1 cut(s) 340
ErhI CCWWGG 1 cut(s) 1184
FaeI CATG 6 cut(s) 272, 381, 422, 680, 1223, 1392
FalI AAGNNNNNCTT 2 cut(s) 577, 609
FaqI GGGAC 4 cut(s) 114, 170, 298, 753
FatI CATG 6 cut(s) 268, 377, 418, 676, 1219, 1388
FauI CCCGC 1 cut(s) 253
FblI GTMKAC 1 cut(s) 928
Fnu4HI GCNGC 7 cut(s) 324, 327, 630, 702, 1074, 1310, 1369
FokI GGATG 4 cut(s) 245, 464, 808, 1305
FriOI GRGCYC 1 cut(s) 340
Fsp4HI GCNGC 7 cut(s) 324, 327, 630, 702, 1074, 1310, 1369
FspBI CTAG 3 cut(s) 779, 1056, 1185
GluI GCNGC 7 cut(s) 324, 327, 630, 702, 1074, 1310, 1369
GsaI CCCAGC 2 cut(s) 979, 1291
GsuI CTGGAG 2 cut(s) 128, 264
HaeIII GGCC 5 cut(s) 191, 338, 563, 981, 1113
HapII CCGG 5 cut(s) 71, 83, 113, 465, 564
HgaI GACGC 1 cut(s) 720
Hin1I GRCGYC 2 cut(s) 159, 712
Hin1II CATG 6 cut(s) 272, 381, 422, 680, 1223, 1392
HincII GTYRAC 1 cut(s) 929
HindII GTYRAC 1 cut(s) 929
HindIII AAGCTT 1 cut(s) 42
HinfI GANTC 8 cut(s) 31, 127, 146, 180, 277, 1040, 1177, 1325
HpaII CCGG 5 cut(s) 71, 83, 113, 465, 564
HphI GGTGA 3 cut(s) 377, 542, 1334
Hpy166II GTNNAC 3 cut(s) 136, 791, 929
Hpy188I TCNGA 4 cut(s) 126, 199, 733, 1194
Hpy188III TCNNGA 3 cut(s) 60, 548, 1208
Hpy8I GTNNAC 3 cut(s) 136, 791, 929
HpyAV CCTTC 6 cut(s) 233, 403, 579, 764, 847, 901
HpyCH4III ACNGT 4 cut(s) 140, 538, 697, 993
HpyCH4IV ACGT 2 cut(s) 18, 159
HpyCH4V TGCA 6 cut(s) 578, 831, 869, 938, 953, 1388
HpyF10VI GCNNNNNNNGC 3 cut(s) 335, 765, 1169
HpyF3I CTNAG 5 cut(s) 196, 473, 1164, 1173, 1377
HpySE526I ACGT 2 cut(s) 18, 159
Hsp92I GRCGYC 2 cut(s) 159, 712
Hsp92II CATG 6 cut(s) 272, 381, 422, 680, 1223, 1392
Kzo9I GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
LmnI GCTCC 3 cut(s) 109, 956, 1241
Lsp1109I GCAGC 7 cut(s) 310, 313, 641, 688, 1060, 1321, 1355
LweI GCATC 5 cut(s) 87, 442, 659, 840, 940
MaeI CTAG 3 cut(s) 779, 1056, 1185
MaeII ACGT 2 cut(s) 18, 159
MaeIII GTNAC 4 cut(s) 102, 352, 664, 1027
MalI GATC 6 cut(s) 226, 502, 689, 837, 883, 1017
MboI GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
MboII GAAGA 7 cut(s) 34, 510, 634, 801, 811, 1191, 1280
MfeI CAATTG 1 cut(s) 1148
MhlI GDGCHC 3 cut(s) 340, 961, 1246
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 5 cut(s) 520, 573, 605, 887, 1148
MluNI TGGCCA 1 cut(s) 191
MlyI GAGTC 4 cut(s) 136, 271, 1049, 1171
Mox20I TGGCCA 1 cut(s) 191
MroXI GAANNNNTTC 1 cut(s) 413
MscI TGGCCA 1 cut(s) 191
MslI CAYNNNNRTG 1 cut(s) 382
Msp20I TGGCCA 1 cut(s) 191
MspA1I CMGCKG 2 cut(s) 488, 632
MspI CCGG 5 cut(s) 71, 83, 113, 465, 564
MspR9I CCNGG 4 cut(s) 72, 282, 466, 894
MunI CAATTG 1 cut(s) 1148
MvaI CCWGG 2 cut(s) 282, 894
MwoI GCNNNNNNNGC 3 cut(s) 335, 765, 1169
NciI CCSGG 2 cut(s) 72, 466
NdeII GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
NlaIII CATG 6 cut(s) 272, 381, 422, 680, 1223, 1392
NlaIV GGNNCC 3 cut(s) 111, 338, 980
NmuCI GTSAC 1 cut(s) 102
NspI RCATGY 2 cut(s) 1223, 1392
PaeI GCATGC 1 cut(s) 1223
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 4 cut(s) 31, 146, 180, 1325
PflMI CCANNNNNTGG 1 cut(s) 424
PfoI TCCNGGA 1 cut(s) 892
PkrI GCNGC 7 cut(s) 325, 328, 631, 703, 1075, 1311, 1370
PleI GAGTC 4 cut(s) 135, 271, 1048, 1171
PpsI GAGTC 4 cut(s) 135, 271, 1048, 1171
Psp6I CCWGG 2 cut(s) 280, 892
PspFI CCCAGC 2 cut(s) 975, 1287
PspGI CCWGG 2 cut(s) 280, 892
PspN4I GGNNCC 3 cut(s) 111, 338, 980
PspOMI GGGCCC 1 cut(s) 336
PspPI GGNCC 5 cut(s) 115, 336, 337, 561, 979
PstI CTGCAG 1 cut(s) 871
PstNI CAGNNNCTG 4 cut(s) 362, 632, 701, 1163
PvuII CAGCTG 2 cut(s) 488, 632
RsaI GTAC 1 cut(s) 1255
RsaNI GTAC 1 cut(s) 1254
RseI CAYNNNNRTG 1 cut(s) 382
SalI GTCGAC 1 cut(s) 927
SatI GCNGC 7 cut(s) 324, 327, 630, 702, 1074, 1310, 1369
Sau3AI GATC 6 cut(s) 224, 500, 687, 835, 881, 1015
Sau96I GGNCC 5 cut(s) 115, 336, 337, 561, 979
ScaI AGTACT 1 cut(s) 1255
SchI GAGTC 4 cut(s) 136, 271, 1049, 1171
ScrFI CCNGG 4 cut(s) 72, 282, 466, 894
SduI GDGCHC 3 cut(s) 340, 961, 1246
SfaNI GCATC 5 cut(s) 87, 442, 659, 840, 940
SfcI CTRYAG 3 cut(s) 693, 867, 1359
SinI GGWCC 1 cut(s) 115
SmiMI CAYNNNNRTG 1 cut(s) 382
SmlI CTYRAG 2 cut(s) 510, 876
SmoI CTYRAG 2 cut(s) 510, 876
SphI GCATGC 1 cut(s) 1223
Sse9I AATT 5 cut(s) 520, 573, 605, 887, 1148
SsiI CCGC 6 cut(s) 165, 171, 230, 260, 708, 1418
SspMI CTAG 3 cut(s) 779, 1056, 1185
StyD4I CCNGG 4 cut(s) 70, 280, 464, 892
StyI CCWWGG 1 cut(s) 1184
TaaI ACNGT 4 cut(s) 140, 538, 697, 993
TaiI ACGT 2 cut(s) 21, 162
TaqI TCGA 2 cut(s) 834, 928
TasI AATT 5 cut(s) 520, 573, 605, 887, 1148
TatI WGTACW 1 cut(s) 1253
TfiI GAWTC 4 cut(s) 31, 146, 180, 1325
TscAI CASTG 4 cut(s) 111, 318, 966, 998
TseFI GTSAC 1 cut(s) 102
TseI GCWGC 7 cut(s) 323, 326, 629, 701, 1073, 1309, 1368
Tsp45I GTSAC 1 cut(s) 102
TspDTI ATGAA 5 cut(s) 17, 468, 634, 651, 812
TspGWI ACGGA 2 cut(s) 808, 1280
TspRI CASTG 4 cut(s) 111, 318, 966, 998
Van91I CCANNNNNTGG 1 cut(s) 424
VpaK11BI GGWCC 1 cut(s) 115
XapI RAATTY 1 cut(s) 887
XceI RCATGY 2 cut(s) 1223, 1392
XmaJI CCTAGG 1 cut(s) 1184
XmiI GTMKAC 1 cut(s) 928
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 3 cut(s) 779, 1056, 1185
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 1 cut(s) 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.