Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0019123

Physical Location & Seq

Genomic Coordinates Reverse (-)

20922747 .. 20924936

Gene Structure 2190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0227900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGATGAAGTACTCTCATTTCAGCTCCCTATTCAACACTCTCCGAAACGCACCACGTCACGTTTCGCTGTACTCAACGGCGGCACCCAAATCTCATCGGAAGTTCTGGAAAGGCTCGCTGAACGGCCTCTACCGTCAGATCTCCCGGAGCGATCCTAAGGCCTCCGTATTACCGATTCTCGACCGATGGGTCCAAGATAGCCGAACCGTAGATAAAGATGACCTCGTCACTATCATCAAGGAGCTCAGGTACTACAAAGACTACAGCCAAGCTCTTGAGGTGTCCATGTGGATGAGTGACAAAAGGTATGTTGAACTTTTGCCCTCTGACGTAGCCATCCGGCTCGACTTGATTGCAAAAGTTCATGGAATAGAACAAGCTGAGAATTATTTTAACAACACTCCCCAACAATTGAAAGTCCTTGAGGTTTACAGTGCTCTCCTCAACTGCTATGCCCATGCAAAACAGTTGGAAAAAGCAGAGGCGACCATGCAGAAGATGAGGGATTTGGGGTTCTCTAGGACGTCATTGTCATACAATGTTTTGCTCAATTTGTATTATAAGACTGGACACTGTGCAAAATTTGACAGTCTGATGAGTGAAATGGAAGAGAATGGCATCGGTTTTGACAGATTCACATATGGGATCAGACTCAGTGCAGCTGCAGCTGCTTCTGATCTCGAGGGAATTGACAAGATTCTGGCAGAATGGGAATCCGATCCTAAGAGTCTTTTGGACTGGATTAATTATGCCGTTGCAGCAAACGGTTATACAAAAGCAGGAGCTGTGGACAAGGCTTTAGCAATGCTAAAGAGATCTGAGGAACAGATACCAAGTTCTAAAAGACAGAGGGGAGCATATCAGTACCTTATGACGCAATATGCAGTACTAGGGAAGAAAGACAATACTTTGAGACTATGGAAATGTTACAAGGAGCAGATGAAAGTATACAATAGGGGTTATATATGCATAATGACCTCACTCTCGAAGTTTGATGACATTGAGAATGCTGAGAAGATCTTTGAAGAGTGGGAATCTGAGCATGCAAATTATGATATTCGTATCCCAAATACCTTGATTGGTGCTTATACCAGGAATGGTTTTCTTGACAAGGCTGAAGCCATTATGAGCAGGATAAGATTGAAGGATGAGAAACCTAATCCTATGGCATGGAATTATTTGGCGAAAGGGTATCTTGATCACGGTCAAATTGAGAAGGTACTTGAATCAGCAACAAAAGCAGTTTCTGCTGCGCAGCCAGGGTGGATGCCGGACAAGGATGTTGTGGTCGCATGTCTGGAATACTTCAAAAGTAAAGCAGATCTGGAAGGAGCCGAGGAATTTATAAAACTCCTCGGGGATAAGAATATTATTCCTGTAAATATGCAGGAGAGATTGTTGAATCATATCAAGAATGAGAATTCAACTGCTGTAATAGGTGAAATGGAATGGGATTGTCCAAATGGGGATGAAGAAACAAGTGAACTTACAGATGTGGAATCAGGGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko01521 ko04012 ko04062 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226

Pfam Domains

Protein Families

Pkinase

Protein Analysis

503

Amino Acids

57.54

Weight (kDa)

5.97

Isoelectric Point (pI)

34.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	176 - 219	2e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019123)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug03G0227800 Rorug03G0227900 Rorug03G0228000 Rorug03G0228000 Rorug03G0228100 Rorug03G0228200.1
rosa_samantha	Rh3DG308200
rosa_wichuraiana	Rw3G024650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	561, 1346
AasI	GACNNNNNNGTC	2 cut(s)	188, 529
AatII	GACGTC	1 cut(s)	527
Acc16I	TGCGCA	1 cut(s)	1254
AccB1I	GGYRCC	1 cut(s)	82
AccI	GTMKAC	1 cut(s)	948
AciI	CCGC	1 cut(s)	80
AclWI	GGATC	3 cut(s)	146, 653, 713
AcsI	RAATTY	3 cut(s)	581, 1340, 1420
AcuI	CTGAAG	1 cut(s)	1137
AcyI	GRCGYC	1 cut(s)	524
AfaI	GTAC	6 cut(s)	11, 71, 251, 866, 888, 1221
AgsI	TTSAA	9 cut(s)	34, 314, 415, 1025, 1144, 1226, 1309, 1402, 1425
AjiI	CACGTC	1 cut(s)	56
AjnI	CCWGG	2 cut(s)	1091, 1258
AloI	GAACNNNNNNTCC	2 cut(s)	497, 529
AluBI	AGCT	7 cut(s)	24, 244, 272, 380, 662, 668, 785
AluI	AGCT	7 cut(s)	24, 244, 272, 380, 662, 668, 785
Alw21I	GWGCWC	2 cut(s)	246, 439
Alw26I	GTCTC	1 cut(s)	907
AlwI	GGATC	3 cut(s)	146, 653, 713
AlwNI	CAGNNNCTG	2 cut(s)	785, 1247
Ama87I	CYCGRG	2 cut(s)	680, 1355
AoxI	GGCC	2 cut(s)	124, 159
ApeKI	GCWGC	7 cut(s)	659, 662, 665, 668, 758, 1250, 1255
ApoI	RAATTY	3 cut(s)	581, 1340, 1420
AseI	ATTAAT	1 cut(s)	744
AspLEI	GCGC	1 cut(s)	1255
AspS9I	GGNCC	1 cut(s)	190
AsuC2I	CCSGG	1 cut(s)	145
AsuHPI	GGTGA	1 cut(s)	1451
AvaI	CYCGRG	2 cut(s)	680, 1355
AvaII	GGWCC	1 cut(s)	190
AxyI	CCTNAGG	1 cut(s)	156
BanI	GGYRCC	1 cut(s)	82
BanII	GRGCYC	1 cut(s)	246
Bbv12I	GWGCWC	2 cut(s)	246, 439
BbvI	GCAGC	7 cut(s)	649, 655, 671, 677, 770, 1237, 1267
BccI	CCATC	2 cut(s)	180, 344
BceAI	ACGGC	3 cut(s)	93, 139, 737
BcgI	CGANNNNNNTGC	2 cut(s)	335, 369
BciT130I	CCWGG	2 cut(s)	1093, 1260
BciVI	GTATCC	1 cut(s)	1073
BclI	TGATCA	1 cut(s)	1198
BcnI	CCSGG	1 cut(s)	145
BcoDI	GTCTC	1 cut(s)	907
BfaI	CTAG	2 cut(s)	519, 890
BfmI	CTRYAG	2 cut(s)	262, 663
BfuI	GTATCC	1 cut(s)	1073
BglII	AGATCT	4 cut(s)	138, 815, 1017, 1321
BisI	GCNGC	8 cut(s)	81, 660, 663, 666, 669, 759, 1251, 1256
BlsI	GCNGC	8 cut(s)	82, 661, 664, 667, 670, 760, 1252, 1257
BmcAI	AGTACT	2 cut(s)	11, 888
Bme1390I	CCNGG	3 cut(s)	145, 1093, 1260
Bme18I	GGWCC	1 cut(s)	190
BmeT110I	CYCGRG	2 cut(s)	680, 1355
BmgBI	CACGTC	1 cut(s)	56
BmgT120I	GGNCC	1 cut(s)	190
BmiI	GGNNCC	3 cut(s)	84, 191, 1333
BmrFI	CCNGG	3 cut(s)	145, 1093, 1260
BmsI	GCATC	2 cut(s)	627, 1257
Bpu10I	CCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	2 cut(s)	296, 443
BpuMI	CCSGG	1 cut(s)	145
BsaHI	GRCGYC	1 cut(s)	524
BsaJI	CCNNGG	3 cut(s)	1259, 1335, 1354
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 1382, 1412
Bse1I	ACTGG	2 cut(s)	571, 743
Bse21I	CCTNAGG	1 cut(s)	156
Bse3DI	GCAATG	1 cut(s)	810
BseBI	CCWGG	2 cut(s)	1093, 1260
BseDI	CCNNGG	3 cut(s)	1259, 1335, 1354
BseGI	GGATG	6 cut(s)	297, 336, 1153, 1272, 1285, 1474
BseMI	GCAATG	1 cut(s)	810
BseMII	CTCAG	6 cut(s)	259, 372, 667, 810, 1002, 1029
BseNI	ACTGG	2 cut(s)	571, 743
BseRI	GAGGAG	2 cut(s)	431, 1343
BseXI	GCAGC	7 cut(s)	649, 655, 671, 677, 770, 1237, 1267
BsgI	GTGCAG	1 cut(s)	678
Bsh1285I	CGRYCG	1 cut(s)	184
BshFI	GGCC	2 cut(s)	126, 161
BshNI	GGYRCC	1 cut(s)	82
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	2 cut(s)	246, 439
BsiHKCI	CYCGRG	2 cut(s)	680, 1355
BsiSI	CCGG	3 cut(s)	145, 340, 1271
BsmAI	GTCTC	1 cut(s)	907
BsmI	GAATGC	1 cut(s)	1012
BsnI	GGCC	2 cut(s)	126, 161
BsoBI	CYCGRG	2 cut(s)	680, 1355
Bsp1286I	GDGCHC	2 cut(s)	246, 439
Bsp143I	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
BspACI	CCGC	1 cut(s)	80
BspANI	GGCC	2 cut(s)	126, 161
BspCNI	CTCAG	6 cut(s)	258, 373, 666, 811, 1003, 1030
BspLI	GGNNCC	3 cut(s)	84, 191, 1333
BspMAI	CTGCAG	1 cut(s)	667
BspPI	GGATC	3 cut(s)	146, 653, 713
BspT107I	GGYRCC	1 cut(s)	82
BsrDI	GCAATG	1 cut(s)	810
BsrI	ACTGG	2 cut(s)	571, 743
BssECI	CCNNGG	3 cut(s)	1259, 1335, 1354
BssMI	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
BssNAI	GTATAC	1 cut(s)	949
BssNI	GRCGYC	1 cut(s)	524
Bst1107I	GTATAC	1 cut(s)	949
Bst2UI	CCWGG	2 cut(s)	1093, 1260
Bst4CI	ACNGT	8 cut(s)	134, 208, 434, 468, 575, 590, 767, 1205
Bst6I	CTCTTC	2 cut(s)	603, 1020
BstACI	GRCGYC	1 cut(s)	524
BstAPI	GCANNNNNTGC	1 cut(s)	1247
BstC8I	GCNNGC	2 cut(s)	116, 1044
BstDEI	CTNAG	8 cut(s)	156, 245, 381, 653, 723, 819, 1011, 1038
BstF5I	GGATG	6 cut(s)	297, 336, 1153, 1272, 1285, 1474
BstHHI	GCGC	1 cut(s)	1255
BstKTI	GATC	9 cut(s)	141, 154, 648, 679, 721, 818, 1020, 1201, 1324
BstMAI	GTCTC	1 cut(s)	907
BstMBI	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
BstMCI	CGRYCG	1 cut(s)	184
BstMWI	GCNNNNNNNGC	5 cut(s)	665, 668, 758, 1238, 1247
BstNI	CCWGG	2 cut(s)	1093, 1260
BstNSI	RCATGY	2 cut(s)	1046, 1296
BstSCI	CCNGG	3 cut(s)	143, 1091, 1258
BstSFI	CTRYAG	2 cut(s)	262, 663
BstV1I	GCAGC	7 cut(s)	649, 655, 671, 677, 770, 1237, 1267
BstX2I	RGATCY	4 cut(s)	138, 815, 1017, 1321
BstYI	RGATCY	4 cut(s)	138, 815, 1017, 1321
BstZ17I	GTATAC	1 cut(s)	949
Bsu36I	CCTNAGG	1 cut(s)	156
BsuI	GTATCC	1 cut(s)	1073
BsuRI	GGCC	2 cut(s)	126, 161
BtrI	CACGTC	1 cut(s)	56
BtsCI	GGATG	6 cut(s)	297, 336, 1153, 1272, 1285, 1474
BtsIMutI	CAGTG	3 cut(s)	439, 571, 661
Cac8I	GCNNGC	2 cut(s)	116, 1044
CaiI	CAGNNNCTG	2 cut(s)	785, 1247
CfoI	GCGC	1 cut(s)	1255
Cfr13I	GGNCC	1 cut(s)	190
CseI	GACGC	1 cut(s)	883
Csp6I	GTAC	6 cut(s)	10, 70, 250, 865, 887, 1220
CviAII	CATG	7 cut(s)	286, 365, 458, 490, 1043, 1170, 1293
CviQI	GTAC	6 cut(s)	10, 70, 250, 865, 887, 1220
DdeI	CTNAG	8 cut(s)	156, 245, 381, 653, 723, 819, 1011, 1038
DpnI	GATC	9 cut(s)	140, 153, 647, 678, 720, 817, 1019, 1200, 1323
DpnII	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
DrdI	GACNNNNNNGTC	2 cut(s)	188, 529
DseDI	GACNNNNNNGTC	2 cut(s)	188, 529
Eam1104I	CTCTTC	2 cut(s)	603, 1020
EarI	CTCTTC	2 cut(s)	603, 1020
Ecl136II	GAGCTC	1 cut(s)	244
Eco147I	AGGCCT	1 cut(s)	161
Eco24I	GRGCYC	1 cut(s)	246
Eco47I	GGWCC	1 cut(s)	190
Eco53kI	GAGCTC	1 cut(s)	244
Eco57I	CTGAAG	1 cut(s)	1137
Eco81I	CCTNAGG	1 cut(s)	156
Eco88I	CYCGRG	2 cut(s)	680, 1355
EcoICRI	GAGCTC	1 cut(s)	244
EcoRI	GAATTC	1 cut(s)	1420
EcoRII	CCWGG	2 cut(s)	1091, 1258
EcoT22I	ATGCAT	1 cut(s)	971
EcoT38I	GRGCYC	1 cut(s)	246
FaeI	CATG	7 cut(s)	289, 368, 461, 493, 1046, 1173, 1296
FalI	AAGNNNNNCTT	2 cut(s)	1179, 1211
FatI	CATG	7 cut(s)	285, 364, 457, 489, 1042, 1169, 1292
FauNDI	CATATG	1 cut(s)	640
FbaI	TGATCA	1 cut(s)	1198
FblI	GTMKAC	1 cut(s)	948
Fnu4HI	GCNGC	8 cut(s)	81, 660, 663, 666, 669, 759, 1251, 1256
FokI	GGATG	6 cut(s)	304, 323, 1160, 1279, 1292, 1481
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	8 cut(s)	81, 660, 663, 666, 669, 759, 1251, 1256
FspBI	CTAG	2 cut(s)	519, 890
FspI	TGCGCA	1 cut(s)	1254
GlaI	GCGC	1 cut(s)	1254
GluI	GCNGC	8 cut(s)	81, 660, 663, 666, 669, 759, 1251, 1256
HaeIII	GGCC	2 cut(s)	126, 161
HapII	CCGG	3 cut(s)	145, 340, 1271
HgaI	GACGC	1 cut(s)	883
HhaI	GCGC	1 cut(s)	1255
Hin1I	GRCGYC	1 cut(s)	524
Hin1II	CATG	7 cut(s)	289, 368, 461, 493, 1046, 1173, 1296
Hin6I	GCGC	1 cut(s)	1253
HinP1I	GCGC	1 cut(s)	1253
HpaII	CCGG	3 cut(s)	145, 340, 1271
HphI	GGTGA	1 cut(s)	1451
Hpy166II	GTNNAC	4 cut(s)	430, 790, 949, 1484
Hpy8I	GTNNAC	4 cut(s)	430, 790, 949, 1484
HpyAV	CCTTC	3 cut(s)	1138, 1210, 1322
HpyCH4III	ACNGT	8 cut(s)	134, 208, 434, 468, 575, 590, 767, 1205
HpyCH4IV	ACGT	4 cut(s)	55, 60, 330, 524
HpyF10VI	GCNNNNNNNGC	5 cut(s)	665, 668, 758, 1238, 1247
HpyF3I	CTNAG	8 cut(s)	156, 245, 381, 653, 723, 819, 1011, 1038
HpySE526I	ACGT	4 cut(s)	55, 60, 330, 524
Hsp92I	GRCGYC	1 cut(s)	524
Hsp92II	CATG	7 cut(s)	289, 368, 461, 493, 1046, 1173, 1296
HspAI	GCGC	1 cut(s)	1253
Ksp22I	TGATCA	1 cut(s)	1198
Kzo9I	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
LmnI	GCTCC	7 cut(s)	29, 147, 241, 782, 854, 934, 1331
Lsp1109I	GCAGC	7 cut(s)	649, 655, 671, 677, 770, 1237, 1267
LweI	GCATC	2 cut(s)	627, 1257
MaeI	CTAG	2 cut(s)	519, 890
MaeII	ACGT	4 cut(s)	55, 60, 330, 524
MaeIII	GTNAC	4 cut(s)	56, 226, 296, 926
MalI	GATC	9 cut(s)	140, 153, 647, 678, 720, 817, 1019, 1200, 1323
MboI	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
MboII	GAAGA	6 cut(s)	508, 620, 907, 1027, 1037, 1484
MfeI	CAATTG	1 cut(s)	410
MflI	RGATCY	4 cut(s)	138, 815, 1017, 1321
MhlI	GDGCHC	2 cut(s)	246, 439
MlyI	GAGTC	2 cut(s)	645, 736
MmeI	TCCRAC	1 cut(s)	450
Mph1103I	ATGCAT	1 cut(s)	971
MseI	TTAA	2 cut(s)	393, 744
MslI	CAYNNNNRTG	1 cut(s)	290
MspA1I	CMGCKG	2 cut(s)	662, 668
MspI	CCGG	3 cut(s)	145, 340, 1271
MspR9I	CCNGG	3 cut(s)	145, 1093, 1260
MunI	CAATTG	1 cut(s)	410
Mva1269I	GAATGC	1 cut(s)	1012
MvaI	CCWGG	2 cut(s)	1093, 1260
MwoI	GCNNNNNNNGC	5 cut(s)	665, 668, 758, 1238, 1247
NciI	CCSGG	1 cut(s)	145
NdeI	CATATG	1 cut(s)	640
NdeII	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
NlaIII	CATG	7 cut(s)	289, 368, 461, 493, 1046, 1173, 1296
NlaIV	GGNNCC	3 cut(s)	84, 191, 1333
NmeAIII	GCCGAG	1 cut(s)	1360
NmuCI	GTSAC	3 cut(s)	56, 226, 296
NsbI	TGCGCA	1 cut(s)	1254
NsiI	ATGCAT	1 cut(s)	971
NspI	RCATGY	2 cut(s)	1046, 1296
PaeI	GCATGC	1 cut(s)	1046
PaeR7I	CTCGAG	1 cut(s)	680
PceI	AGGCCT	1 cut(s)	161
PctI	GAATGC	1 cut(s)	1012
PfeI	GAWTC	8 cut(s)	175, 633, 697, 713, 1034, 1226, 1402, 1499
PflFI	GACNNNGTC	1 cut(s)	224
PfoI	TCCNGGA	1 cut(s)	143
PkrI	GCNGC	8 cut(s)	82, 661, 664, 667, 670, 760, 1252, 1257
PleI	GAGTC	2 cut(s)	645, 735
PpsI	GAGTC	2 cut(s)	645, 735
PshBI	ATTAAT	1 cut(s)	744
PsiI	TTATAA	2 cut(s)	561, 1346
Psp124BI	GAGCTC	1 cut(s)	246
Psp6I	CCWGG	2 cut(s)	1091, 1258
PspGI	CCWGG	2 cut(s)	1091, 1258
PspN4I	GGNNCC	3 cut(s)	84, 191, 1333
PspPI	GGNCC	1 cut(s)	190
PsrI	GAACNNNNNNTAC	2 cut(s)	113, 145
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	2 cut(s)	785, 1247
PsuI	RGATCY	4 cut(s)	138, 815, 1017, 1321
PsyI	GACNNNGTC	1 cut(s)	224
PvuII	CAGCTG	2 cut(s)	662, 668
RsaI	GTAC	6 cut(s)	11, 71, 251, 866, 888, 1221
RsaNI	GTAC	6 cut(s)	10, 70, 250, 865, 887, 1220
RseI	CAYNNNNRTG	1 cut(s)	290
SacI	GAGCTC	1 cut(s)	246
SaqAI	TTAA	2 cut(s)	393, 744
SatI	GCNGC	8 cut(s)	81, 660, 663, 666, 669, 759, 1251, 1256
Sau3AI	GATC	9 cut(s)	138, 151, 645, 676, 718, 815, 1017, 1198, 1321
Sau96I	GGNCC	1 cut(s)	190
ScaI	AGTACT	2 cut(s)	11, 888
SchI	GAGTC	2 cut(s)	645, 736
ScrFI	CCNGG	3 cut(s)	145, 1093, 1260
SduI	GDGCHC	2 cut(s)	246, 439
SfaNI	GCATC	2 cut(s)	627, 1257
SfcI	CTRYAG	2 cut(s)	262, 663
Sfr274I	CTCGAG	1 cut(s)	680
SinI	GGWCC	1 cut(s)	190
SlaI	CTCGAG	1 cut(s)	680
SmiMI	CAYNNNNRTG	1 cut(s)	290
SmlI	CTYRAG	3 cut(s)	275, 422, 680
SmoI	CTYRAG	3 cut(s)	275, 422, 680
SphI	GCATGC	1 cut(s)	1046
SseBI	AGGCCT	1 cut(s)	161
SsiI	CCGC	1 cut(s)	80
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	2 cut(s)	519, 890
SstI	GAGCTC	1 cut(s)	246
StuI	AGGCCT	1 cut(s)	161
StyD4I	CCNGG	3 cut(s)	143, 1091, 1258
TaaI	ACNGT	8 cut(s)	134, 208, 434, 468, 575, 590, 767, 1205
TaiI	ACGT	4 cut(s)	58, 63, 333, 527
TaqI	TCGA	4 cut(s)	180, 345, 681, 986
TaqII	GACCGA	1 cut(s)	198
TatI	WGTACW	3 cut(s)	9, 69, 886
TauI	GCSGC	1 cut(s)	83
TfiI	GAWTC	8 cut(s)	175, 633, 697, 713, 1034, 1226, 1402, 1499
Tru1I	TTAA	2 cut(s)	393, 744
Tru9I	TTAA	2 cut(s)	393, 744
TscAI	CASTG	3 cut(s)	439, 578, 661
TseFI	GTSAC	3 cut(s)	56, 226, 296
TseI	GCWGC	7 cut(s)	659, 662, 665, 668, 758, 1250, 1255
Tsp45I	GTSAC	3 cut(s)	56, 226, 296
TspDTI	ATGAA	4 cut(s)	20, 353, 956, 1485
TspGWI	ACGGA	1 cut(s)	154
TspRI	CASTG	3 cut(s)	439, 578, 661
Tth111I	GACNNNGTC	1 cut(s)	224
VpaK11BI	GGWCC	1 cut(s)	190
VspI	ATTAAT	1 cut(s)	744
XapI	RAATTY	3 cut(s)	581, 1340, 1420
XceI	RCATGY	2 cut(s)	1046, 1296
XhoI	CTCGAG	1 cut(s)	680
XmiI	GTMKAC	1 cut(s)	948
XspI	CTAG	2 cut(s)	519, 890
ZraI	GACGTC	1 cut(s)	525
ZrmI	AGTACT	2 cut(s)	11, 888
Zsp2I	ATGCAT	1 cut(s)	971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.