pre-rRNA-processing protein TSR2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22510 |
| malus_domestica | MD16G1195200.v1.1 |
| prunus_persica | Prupe.1G015200_v2.0.a1 Prupe.1G015200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0416031 |
| rosa_laevigata | RLG00000008023 |
| rosa_multiflora | Rmu_sc0007573.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00359870 |
| rosa_rugosa | Rorug04G0137500 |
| rosa_samantha | Rh4AG199900 Rh4BG197400 Rh4CG211100 Rh4DG197600 |
| rosa_wichuraiana | Rw4G016970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 366 |
| AfaI | GTAC | 1 cut(s) | 194 |
| AfeI | AGCGCT | 1 cut(s) | 155 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 86, 229 |
| AgsI | TTSAA | 1 cut(s) | 325 |
| Alw26I | GTCTC | 1 cut(s) | 94 |
| Aor51HI | AGCGCT | 1 cut(s) | 155 |
| ApoI | RAATTY | 1 cut(s) | 366 |
| AspLEI | GCGC | 1 cut(s) | 156 |
| AsuHPI | GGTGA | 1 cut(s) | 329 |
| BccI | CCATC | 1 cut(s) | 88 |
| BclI | TGATCA | 1 cut(s) | 288 |
| BcoDI | GTCTC | 1 cut(s) | 94 |
| BfoI | RGCGCY | 1 cut(s) | 157 |
| BpmI | CTGGAG | 1 cut(s) | 128 |
| BpuEI | CTTGAG | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 1 cut(s) | 159 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 140, 170 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 86, 229 |
| Bse118I | RCCGGY | 1 cut(s) | 268 |
| Bse1I | ACTGG | 2 cut(s) | 111, 223 |
| Bse3DI | GCAATG | 2 cut(s) | 21, 135 |
| BseDI | CCNNGG | 1 cut(s) | 159 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 86, 229 |
| BseMI | GCAATG | 2 cut(s) | 21, 135 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseNI | ACTGG | 2 cut(s) | 111, 223 |
| BsiSI | CCGG | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 86, 229 |
| BsmAI | GTCTC | 1 cut(s) | 94 |
| Bsp143I | GATC | 1 cut(s) | 288 |
| Bsp19I | CCATGG | 1 cut(s) | 159 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspHI | TCATGA | 1 cut(s) | 291 |
| BsrDI | GCAATG | 2 cut(s) | 21, 135 |
| BsrFI | RCCGGY | 1 cut(s) | 268 |
| BsrI | ACTGG | 2 cut(s) | 111, 223 |
| BssAI | RCCGGY | 1 cut(s) | 268 |
| BssECI | CCNNGG | 1 cut(s) | 159 |
| BssMI | GATC | 1 cut(s) | 288 |
| BssT1I | CCWWGG | 1 cut(s) | 159 |
| Bst6I | CTCTTC | 1 cut(s) | 53 |
| BstDEI | CTNAG | 1 cut(s) | 189 |
| BstDSI | CCRYGG | 1 cut(s) | 159 |
| BstH2I | RGCGCY | 1 cut(s) | 157 |
| BstHHI | GCGC | 1 cut(s) | 156 |
| BstKTI | GATC | 1 cut(s) | 291 |
| BstMAI | GTCTC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 288 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 179 |
| BtgI | CCRYGG | 1 cut(s) | 159 |
| CciI | TCATGA | 1 cut(s) | 291 |
| CfoI | GCGC | 1 cut(s) | 156 |
| Cfr10I | RCCGGY | 1 cut(s) | 268 |
| Csp6I | GTAC | 1 cut(s) | 193 |
| CviAII | CATG | 3 cut(s) | 160, 286, 292 |
| CviJI | RGCY | 3 cut(s) | 64, 207, 272 |
| CviKI_1 | RGCY | 3 cut(s) | 64, 207, 272 |
| CviQI | GTAC | 1 cut(s) | 193 |
| DdeI | CTNAG | 1 cut(s) | 189 |
| DpnI | GATC | 1 cut(s) | 290 |
| DpnII | GATC | 1 cut(s) | 288 |
| Eam1104I | CTCTTC | 1 cut(s) | 53 |
| EarI | CTCTTC | 1 cut(s) | 53 |
| Eco130I | CCWWGG | 1 cut(s) | 159 |
| Eco47III | AGCGCT | 1 cut(s) | 155 |
| EcoRI | GAATTC | 1 cut(s) | 366 |
| EcoT14I | CCWWGG | 1 cut(s) | 159 |
| ErhI | CCWWGG | 1 cut(s) | 159 |
| FaeI | CATG | 3 cut(s) | 163, 289, 295 |
| FaiI | YATR | 8 cut(s) | 47, 119, 161, 168, 241, 287, 293, 336 |
| FatI | CATG | 3 cut(s) | 159, 285, 291 |
| FbaI | TGATCA | 1 cut(s) | 288 |
| GlaI | GCGC | 1 cut(s) | 155 |
| GsuI | CTGGAG | 1 cut(s) | 128 |
| HaeII | RGCGCY | 1 cut(s) | 157 |
| HapII | CCGG | 1 cut(s) | 269 |
| HhaI | GCGC | 1 cut(s) | 156 |
| Hin1II | CATG | 3 cut(s) | 163, 289, 295 |
| Hin6I | GCGC | 1 cut(s) | 154 |
| HinP1I | GCGC | 1 cut(s) | 154 |
| HpaII | CCGG | 1 cut(s) | 269 |
| HphI | GGTGA | 1 cut(s) | 329 |
| Hpy188III | TCNNGA | 1 cut(s) | 292 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyCH4IV | ACGT | 1 cut(s) | 219 |
| HpyCH4V | TGCA | 3 cut(s) | 14, 140, 256 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 179 |
| HpyF3I | CTNAG | 1 cut(s) | 189 |
| HpySE526I | ACGT | 1 cut(s) | 219 |
| Hsp92II | CATG | 3 cut(s) | 163, 289, 295 |
| HspAI | GCGC | 1 cut(s) | 154 |
| Ksp22I | TGATCA | 1 cut(s) | 288 |
| Kzo9I | GATC | 1 cut(s) | 288 |
| LmnI | GCTCC | 1 cut(s) | 161 |
| LpnPI | CCDG | 4 cut(s) | 92, 236, 282, 339 |
| MaeII | ACGT | 1 cut(s) | 219 |
| MalI | GATC | 1 cut(s) | 290 |
| MboI | GATC | 1 cut(s) | 288 |
| MboII | GAAGA | 2 cut(s) | 70, 228 |
| MluCI | AATT | 2 cut(s) | 128, 366 |
| MnlI | CCTC | 5 cut(s) | 46, 46, 54, 103, 288 |
| MseI | TTAA | 1 cut(s) | 376 |
| MslI | CAYNNNNRTG | 1 cut(s) | 290 |
| MspI | CCGG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 179 |
| NcoI | CCATGG | 1 cut(s) | 159 |
| NdeII | GATC | 1 cut(s) | 288 |
| NlaIII | CATG | 3 cut(s) | 163, 289, 295 |
| PagI | TCATGA | 1 cut(s) | 291 |
| RsaI | GTAC | 1 cut(s) | 194 |
| RsaNI | GTAC | 1 cut(s) | 193 |
| RseI | CAYNNNNRTG | 1 cut(s) | 290 |
| SaqAI | TTAA | 1 cut(s) | 376 |
| Sau3AI | GATC | 1 cut(s) | 288 |
| SetI | ASST | 5 cut(s) | 114, 222, 281, 299, 341 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 290 |
| SmlI | CTYRAG | 1 cut(s) | 84 |
| SmoI | CTYRAG | 1 cut(s) | 84 |
| Sse9I | AATT | 2 cut(s) | 128, 366 |
| StyI | CCWWGG | 1 cut(s) | 159 |
| TaiI | ACGT | 1 cut(s) | 222 |
| TaqI | TCGA | 1 cut(s) | 281 |
| TasI | AATT | 2 cut(s) | 128, 366 |
| TatI | WGTACW | 1 cut(s) | 192 |
| Tru1I | TTAA | 1 cut(s) | 376 |
| Tru9I | TTAA | 1 cut(s) | 376 |
| TspDTI | ATGAA | 2 cut(s) | 106, 228 |
| XapI | RAATTY | 1 cut(s) | 366 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 13 |