Rorug04G0289800

Serine threonine-protein kinase STN7

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
46434027 .. 46436239
2213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0289800.1

Sequence Viewer

Length: 1014 bp
ATGGCCATGAAGTACTTGGCTCTACTTTCGCTATTGCTCAACCTCGCAGTTTTGTTTTCAATTGTGCCGAAAACCACAAGTGAAGGAGGAGGATATGGTGATGATTGTGGTGACCAATCAGGGAATGATGTGTCCAATCTCTGCCCCGCGGCAGAGGCTATAATATTTTCTCGGGTCCAAGAGGCGGTGTTGGAAGACTCCAGAATGGCAGCCTCTCTACTTCGCCTCCATTTCCACGACTGCTTTGTCAATGGGTGCGATGCTTCAGTGTTACTAGATGATAGTGCCAACTTTGTAGGAGAAAAAACAGCAGCACCTAACTTGAATTCTCTGAGGGGTTTTGATGTCATTGATGCTATCAAATCAGACCTTGAATCTGTTTGCCCCGAAACAGTTTCTTGCGCCGACATTCTTGCTACTGCTGCCAGAGACTCTGTTGTTCTGTCTGGCGGACCAAGCTGGGATGTTCAAATGGGAAGAAAGGACAGCTTCACCGCTAGCAAATCATTAGCAAATAACAACATACCAGGCCCAAATTCCACTGTTGCAAACCTGGTTTCCAAGTTCCAGAATGTAAACCTTAGTCTGAGGGACATGGTTGTGCTCTCTGGTGCACACACTATGGGGAAAGCCCGGTGTACCACCTTCCGCGGGCGCCTACAAGGCGCTACCACCTCGAATGCCCTGGATGCATCCCTTGAGTTCGTTCAGTCCCTGCAGGAACTGTGCTCCGGATCAGACAGCAATGCAACACTGGCCAATCTTGACCTTGCAACCCCGGCAACATTTGACAACCAGTACTATGTTAACCTGCTTTCGGGACAGGGTTTGCTTCCTTCGGACCAGAATCTGGTGACCGGAGATGATCAGACCCTTGAGCTTGTGGAAACCTATGCAGAGGATGTGGTTGCCTTCTTTGAGGACTTCAAAAACTCCATGATCAAAATGGGAAGCTTGGGAGTGGGGACTGGGATGAACGGGGAGATTCGTAGGAATTGTCGAGCTGTCAATTGA

Protein Analysis

337

Amino Acids

35.78

Weight (kDa)

4.47

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 57 - 301 3.2e-84 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014458)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68830
fragaria_vesca FvH4_4g28080
malus_domestica MD03G1264300.v1.1 MD13G1046400.v1.1
prunus_persica Prupe.1G305500_v2.0.a1
pyrus_communis pycom13g04070
rosa_chinensis RchiOBHm_Chr4g0435821
rosa_laevigata RLG00000006556
rosa_multiflora Rmu_sc0002642.1_g000004 Rmu_sc0010838.1_g000002
rosa_roxburghii Rroxscaffold_5G00377000
rosa_rugosa Rorug04G0289800
rosa_samantha Rh4AG344100 Rh4BG353000 Rh4CG367400 Rh4DG346900
rosa_wichuraiana Rw4G030060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 245
Acc36I ACCTGC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 654
AccB7I CCANNNNNTGG 1 cut(s) 850
AccII CGCG 2 cut(s) 149, 651
AccIII TCCGGA 1 cut(s) 731
AciI CCGC 7 cut(s) 147, 149, 185, 450, 495, 649, 651
AclWI GGATC 1 cut(s) 742
AcoI YGGCCR 2 cut(s) 3, 756
AcsI RAATTY 2 cut(s) 325, 535
AcuI CTGAAG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 655
AfaI GTAC 3 cut(s) 14, 640, 800
AfiI CCNNNNNNNGG 4 cut(s) 184, 651, 817, 850
AgsI TTSAA 5 cut(s) 60, 325, 374, 470, 928
AjnI CCWGG 3 cut(s) 526, 552, 684
AluBI AGCT 5 cut(s) 459, 489, 880, 954, 1004
AluI AGCT 5 cut(s) 459, 489, 880, 954, 1004
Alw21I GWGCWC 3 cut(s) 606, 616, 731
Alw26I GTCTC 1 cut(s) 423
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 1 cut(s) 742
AlwNI CAGNNNCTG 3 cut(s) 715, 724, 850
Ama87I CYCGRG 1 cut(s) 171
Aor13HI TCCGGA 1 cut(s) 731
AoxI GGCC 3 cut(s) 3, 529, 756
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 3 cut(s) 209, 311, 422
ApoI RAATTY 2 cut(s) 325, 535
AspLEI GCGC 3 cut(s) 404, 657, 668
AspS9I GGNCC 4 cut(s) 175, 452, 530, 841
AsuC2I CCSGG 2 cut(s) 634, 779
AsuHPI GGTGA 4 cut(s) 110, 122, 484, 865
AsuNHI GCTAGC 1 cut(s) 497
AvaI CYCGRG 1 cut(s) 171
AvaII GGWCC 3 cut(s) 175, 452, 841
BaeGI GKGCMC 1 cut(s) 616
BalI TGGCCA 2 cut(s) 5, 758
BanI GGYRCC 1 cut(s) 654
BbsI GAAGAC 1 cut(s) 201
Bbv12I GWGCWC 3 cut(s) 606, 616, 731
BbvI GCAGC 3 cut(s) 221, 323, 409
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 3 cut(s) 528, 554, 686
BclI TGATCA 2 cut(s) 865, 939
BcnI CCSGG 2 cut(s) 634, 779
BcoDI GTCTC 1 cut(s) 423
BfaI CTAG 2 cut(s) 275, 498
BfmI CTRYAG 1 cut(s) 716
BfoI RGCGCY 2 cut(s) 658, 669
BfuAI ACCTGC 1 cut(s) 819
BglI GCCNNNNNGGC 1 cut(s) 663
BisI GCNGC 4 cut(s) 150, 210, 312, 423
BlsI GCNGC 4 cut(s) 151, 211, 313, 424
BmcAI AGTACT 2 cut(s) 14, 800
Bme1390I CCNGG 5 cut(s) 528, 554, 634, 686, 779
Bme18I GGWCC 3 cut(s) 175, 452, 841
BmeT110I CYCGRG 1 cut(s) 171
BmgT120I GGNCC 4 cut(s) 175, 452, 530, 841
BmiI GGNNCC 2 cut(s) 176, 656
BmrFI CCNGG 5 cut(s) 528, 554, 634, 686, 779
BmrI ACTGGG 1 cut(s) 978
BmsI GCATC 4 cut(s) 250, 343, 679, 701
BmtI GCTAGC 1 cut(s) 501
BmuI ACTGGG 1 cut(s) 978
BpiI GAAGAC 1 cut(s) 201
BpmI CTGGAG 1 cut(s) 184
BpuEI CTTGAG 2 cut(s) 719, 896
BpuMI CCSGG 2 cut(s) 634, 779
BsaHI GRCGYC 1 cut(s) 655
BsaJI CCNNGG 4 cut(s) 147, 649, 684, 777
BsaWI WCCGGW 2 cut(s) 731, 857
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 651, 817, 850
Bse1I ACTGG 3 cut(s) 759, 796, 973
Bse3DI GCAATG 1 cut(s) 751
BseAI TCCGGA 1 cut(s) 731
BseBI CCWGG 3 cut(s) 528, 554, 686
BseDI CCNNGG 4 cut(s) 147, 649, 684, 777
BseGI GGATG 5 cut(s) 469, 692, 694, 907, 978
BseLI CCNNNNNNNGG 4 cut(s) 184, 651, 817, 850
BseMI GCAATG 1 cut(s) 751
BseMII CTCAG 2 cut(s) 323, 578
BseNI ACTGG 3 cut(s) 759, 796, 973
BseRI GAGGAG 1 cut(s) 102
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 3 cut(s) 221, 323, 409
BseYI CCCAGC 1 cut(s) 459
Bsh1236I CGCG 2 cut(s) 149, 651
BshFI GGCC 3 cut(s) 5, 531, 758
BshNI GGYRCC 1 cut(s) 654
BsiHKAI GWGCWC 3 cut(s) 606, 616, 731
BsiHKCI CYCGRG 1 cut(s) 171
BsiSI CCGG 4 cut(s) 634, 732, 779, 858
BslFI GGGAC 4 cut(s) 605, 697, 834, 979
BslI CCNNNNNNNGG 4 cut(s) 184, 651, 817, 850
BsmAI GTCTC 1 cut(s) 423
BsmFI GGGAC 4 cut(s) 605, 697, 834, 979
BsmI GAATGC 1 cut(s) 685
BsnI GGCC 3 cut(s) 5, 531, 758
BsoBI CYCGRG 1 cut(s) 171
Bsp1286I GDGCHC 3 cut(s) 606, 616, 731
Bsp13I TCCGGA 1 cut(s) 731
Bsp143I GATC 3 cut(s) 734, 865, 939
BspACI CCGC 7 cut(s) 147, 149, 185, 450, 495, 649, 651
BspANI GGCC 3 cut(s) 5, 531, 758
BspCNI CTCAG 2 cut(s) 324, 579
BspEI TCCGGA 1 cut(s) 731
BspFNI CGCG 2 cut(s) 149, 651
BspLI GGNNCC 2 cut(s) 176, 656
BspMAI CTGCAG 1 cut(s) 720
BspMI ACCTGC 1 cut(s) 819
BspOI GCTAGC 1 cut(s) 501
BspPI GGATC 1 cut(s) 742
BspT107I GGYRCC 1 cut(s) 654
BsrDI GCAATG 1 cut(s) 751
BsrI ACTGG 3 cut(s) 759, 796, 973
BssECI CCNNGG 4 cut(s) 147, 649, 684, 777
BssMI GATC 3 cut(s) 734, 865, 939
BssNI GRCGYC 1 cut(s) 655
Bst2UI CCWGG 3 cut(s) 528, 554, 686
Bst4CI ACNGT 3 cut(s) 394, 544, 726
BstACI GRCGYC 1 cut(s) 655
BstC8I GCNNGC 2 cut(s) 499, 653
BstDEI CTNAG 3 cut(s) 332, 581, 587
BstDSI CCRYGG 2 cut(s) 147, 649
BstEII GGTNACC 2 cut(s) 110, 853
BstF5I GGATG 5 cut(s) 469, 692, 694, 907, 978
BstFNI CGCG 2 cut(s) 149, 651
BstH2I RGCGCY 2 cut(s) 658, 669
BstHHI GCGC 3 cut(s) 404, 657, 668
BstKTI GATC 3 cut(s) 737, 868, 942
BstMAI GTCTC 1 cut(s) 423
BstMBI GATC 3 cut(s) 734, 865, 939
BstMWI GCNNNNNNNGC 7 cut(s) 155, 422, 456, 663, 689, 755, 779
BstNI CCWGG 3 cut(s) 528, 554, 686
BstPI GGTNACC 2 cut(s) 110, 853
BstSCI CCNGG 5 cut(s) 526, 552, 632, 684, 777
BstSFI CTRYAG 1 cut(s) 716
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 2 cut(s) 149, 651
BstV1I GCAGC 3 cut(s) 221, 323, 409
BstV2I GAAGAC 1 cut(s) 201
BsuRI GGCC 3 cut(s) 5, 531, 758
BtgI CCRYGG 2 cut(s) 147, 649
BtgZI GCGATG 1 cut(s) 273
BtsCI GGATG 5 cut(s) 469, 692, 694, 907, 978
BtsIMutI CAGTG 3 cut(s) 273, 540, 752
BveI ACCTGC 1 cut(s) 819
Cac8I GCNNGC 2 cut(s) 499, 653
CaiI CAGNNNCTG 3 cut(s) 715, 724, 850
CfoI GCGC 3 cut(s) 404, 657, 668
Cfr13I GGNCC 4 cut(s) 175, 452, 530, 841
Cfr42I CCGCGG 2 cut(s) 150, 652
CsiI ACCWGGT 1 cut(s) 552
Csp6I GTAC 3 cut(s) 13, 639, 799
CviAII CATG 3 cut(s) 7, 595, 937
CviQI GTAC 3 cut(s) 13, 639, 799
DdeI CTNAG 3 cut(s) 332, 581, 587
DinI GGCGCC 1 cut(s) 656
DpnI GATC 3 cut(s) 736, 867, 941
DpnII GATC 3 cut(s) 734, 865, 939
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 2 cut(s) 3, 756
EciI GGCGGA 1 cut(s) 465
Eco47I GGWCC 3 cut(s) 175, 452, 841
Eco57I CTGAAG 1 cut(s) 249
Eco88I CYCGRG 1 cut(s) 171
Eco91I GGTNACC 2 cut(s) 110, 853
EcoO65I GGTNACC 2 cut(s) 110, 853
EcoRI GAATTC 1 cut(s) 325
EcoRII CCWGG 3 cut(s) 526, 552, 684
EcoT22I ATGCAT 1 cut(s) 694
EgeI GGCGCC 1 cut(s) 656
EheI GGCGCC 1 cut(s) 656
FaeI CATG 3 cut(s) 10, 598, 940
FaiI YATR 9 cut(s) 8, 96, 161, 524, 596, 623, 804, 894, 938
FalI AAGNNNNNCTT 2 cut(s) 473, 505
FaqI GGGAC 4 cut(s) 605, 697, 834, 979
FatI CATG 3 cut(s) 6, 594, 936
FauI CCCGC 2 cut(s) 154, 644
FbaI TGATCA 2 cut(s) 865, 939
Fnu4HI GCNGC 4 cut(s) 150, 210, 312, 423
FokI GGATG 5 cut(s) 476, 679, 701, 914, 985
Fsp4HI GCNGC 4 cut(s) 150, 210, 312, 423
FspBI CTAG 2 cut(s) 275, 498
GlaI GCGC 3 cut(s) 403, 656, 667
GluI GCNGC 4 cut(s) 150, 210, 312, 423
GsaI CCCAGC 1 cut(s) 463
GsuI CTGGAG 1 cut(s) 184
HaeII RGCGCY 2 cut(s) 658, 669
HaeIII GGCC 3 cut(s) 5, 531, 758
HapII CCGG 4 cut(s) 634, 732, 779, 858
HhaI GCGC 3 cut(s) 404, 657, 668
Hin1I GRCGYC 1 cut(s) 655
Hin1II CATG 3 cut(s) 10, 598, 940
Hin6I GCGC 3 cut(s) 402, 655, 666
HinP1I GCGC 3 cut(s) 402, 655, 666
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 5 cut(s) 197, 374, 431, 847, 985
HpaI GTTAAC 1 cut(s) 808
HpaII CCGG 4 cut(s) 634, 732, 779, 858
HphI GGTGA 4 cut(s) 110, 122, 484, 865
Hpy166II GTNNAC 4 cut(s) 577, 614, 639, 808
Hpy188I TCNGA 6 cut(s) 333, 367, 588, 739, 841, 870
Hpy188III TCNNGA 5 cut(s) 201, 568, 732, 764, 819
Hpy8I GTNNAC 4 cut(s) 577, 614, 639, 808
HpyAV CCTTC 4 cut(s) 77, 655, 846, 922
HpyCH4III ACNGT 3 cut(s) 394, 544, 726
HpyCH4V TGCA 7 cut(s) 548, 614, 692, 718, 749, 773, 896
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 422, 456, 663, 689, 755, 779
HpyF3I CTNAG 3 cut(s) 332, 581, 587
Hsp92I GRCGYC 1 cut(s) 655
Hsp92II CATG 3 cut(s) 10, 598, 940
HspAI GCGC 3 cut(s) 402, 655, 666
KasI GGCGCC 1 cut(s) 654
Kpn2I TCCGGA 1 cut(s) 731
Ksp22I TGATCA 2 cut(s) 865, 939
KspAI GTTAAC 1 cut(s) 808
KspI CCGCGG 2 cut(s) 150, 652
Kzo9I GATC 3 cut(s) 734, 865, 939
LmnI GCTCC 1 cut(s) 734
Lsp1109I GCAGC 3 cut(s) 221, 323, 409
LweI GCATC 4 cut(s) 250, 343, 679, 701
MabI ACCWGGT 1 cut(s) 552
MaeI CTAG 2 cut(s) 275, 498
MaeIII GTNAC 3 cut(s) 110, 270, 853
MalI GATC 3 cut(s) 736, 867, 941
MboI GATC 3 cut(s) 734, 865, 939
MboII GAAGA 2 cut(s) 206, 489
MfeI CAATTG 2 cut(s) 60, 1009
MhlI GDGCHC 3 cut(s) 606, 616, 731
MlsI TGGCCA 2 cut(s) 5, 758
MluCI AATT 5 cut(s) 60, 325, 535, 994, 1009
MluNI TGGCCA 2 cut(s) 5, 758
Mly113I GGCGCC 1 cut(s) 655
MlyI GAGTC 2 cut(s) 191, 425
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 2 cut(s) 5, 758
Mph1103I ATGCAT 1 cut(s) 694
MroI TCCGGA 1 cut(s) 731
MscI TGGCCA 2 cut(s) 5, 758
MseI TTAA 1 cut(s) 807
MslI CAYNNNNRTG 1 cut(s) 599
Msp20I TGGCCA 2 cut(s) 5, 758
MspA1I CMGCKG 2 cut(s) 149, 651
MspI CCGG 4 cut(s) 634, 732, 779, 858
MspR9I CCNGG 5 cut(s) 528, 554, 634, 686, 779
MunI CAATTG 2 cut(s) 60, 1009
Mva1269I GAATGC 1 cut(s) 685
MvaI CCWGG 3 cut(s) 528, 554, 686
MvnI CGCG 2 cut(s) 149, 651
MwoI GCNNNNNNNGC 7 cut(s) 155, 422, 456, 663, 689, 755, 779
NarI GGCGCC 1 cut(s) 655
NciI CCSGG 2 cut(s) 634, 779
NdeII GATC 3 cut(s) 734, 865, 939
NheI GCTAGC 1 cut(s) 497
NlaIII CATG 3 cut(s) 10, 598, 940
NlaIV GGNNCC 2 cut(s) 176, 656
NmuCI GTSAC 2 cut(s) 110, 853
NsiI ATGCAT 1 cut(s) 694
PctI GAATGC 1 cut(s) 685
PfeI GAWTC 3 cut(s) 374, 847, 985
PflMI CCANNNNNTGG 1 cut(s) 850
PkrI GCNGC 4 cut(s) 151, 211, 313, 424
PleI GAGTC 2 cut(s) 191, 425
PluTI GGCGCC 1 cut(s) 658
PpsI GAGTC 2 cut(s) 191, 425
Psp6I CCWGG 3 cut(s) 526, 552, 684
PspEI GGTNACC 2 cut(s) 110, 853
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 3 cut(s) 526, 552, 684
PspN4I GGNNCC 2 cut(s) 176, 656
PspPI GGNCC 4 cut(s) 175, 452, 530, 841
PstI CTGCAG 1 cut(s) 720
PstNI CAGNNNCTG 3 cut(s) 715, 724, 850
RsaI GTAC 3 cut(s) 14, 640, 800
RsaNI GTAC 3 cut(s) 13, 639, 799
RseI CAYNNNNRTG 1 cut(s) 599
SacII CCGCGG 2 cut(s) 150, 652
SaqAI TTAA 1 cut(s) 807
SatI GCNGC 4 cut(s) 150, 210, 312, 423
Sau3AI GATC 3 cut(s) 734, 865, 939
Sau96I GGNCC 4 cut(s) 175, 452, 530, 841
SbfI CCTGCAGG 1 cut(s) 720
ScaI AGTACT 2 cut(s) 14, 800
SchI GAGTC 2 cut(s) 191, 425
ScrFI CCNGG 5 cut(s) 528, 554, 634, 686, 779
SdaI CCTGCAGG 1 cut(s) 720
SduI GDGCHC 3 cut(s) 606, 616, 731
SexAI ACCWGGT 1 cut(s) 552
SfaNI GCATC 4 cut(s) 250, 343, 679, 701
SfcI CTRYAG 1 cut(s) 716
SfoI GGCGCC 1 cut(s) 656
Sfr303I CCGCGG 2 cut(s) 150, 652
SgrBI CCGCGG 2 cut(s) 150, 652
SinI GGWCC 3 cut(s) 175, 452, 841
SmiMI CAYNNNNRTG 1 cut(s) 599
SmlI CTYRAG 2 cut(s) 698, 875
SmoI CTYRAG 2 cut(s) 698, 875
Sse8387I CCTGCAGG 1 cut(s) 720
Sse9I AATT 5 cut(s) 60, 325, 535, 994, 1009
SsiI CCGC 7 cut(s) 147, 149, 185, 450, 495, 649, 651
SspDI GGCGCC 1 cut(s) 654
SspI AATATT 1 cut(s) 165
SspMI CTAG 2 cut(s) 275, 498
StyD4I CCNGG 5 cut(s) 526, 552, 632, 684, 777
TaaI ACNGT 3 cut(s) 394, 544, 726
TaqI TCGA 2 cut(s) 677, 1000
TasI AATT 5 cut(s) 60, 325, 535, 994, 1009
TatI WGTACW 2 cut(s) 12, 798
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 3 cut(s) 374, 847, 985
Tru1I TTAA 1 cut(s) 807
Tru9I TTAA 1 cut(s) 807
TscAI CASTG 3 cut(s) 273, 547, 759
TseFI GTSAC 2 cut(s) 110, 853
TseI GCWGC 3 cut(s) 209, 311, 422
Tsp45I GTSAC 2 cut(s) 110, 853
TspDTI ATGAA 2 cut(s) 23, 989
TspRI CASTG 3 cut(s) 273, 547, 759
Van91I CCANNNNNTGG 1 cut(s) 850
VneI GTGCAC 1 cut(s) 612
VpaK11BI GGWCC 3 cut(s) 175, 452, 841
XapI RAATTY 2 cut(s) 325, 535
XcmI CCANNNNNNNNNTGG 2 cut(s) 13, 943
XspI CTAG 2 cut(s) 275, 498
ZrmI AGTACT 2 cut(s) 14, 800
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.