Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0021439

Physical Location & Seq

Genomic Coordinates Reverse (-)

3081143 .. 3084737

Gene Structure 3595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0038300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGTTACTGAAAGCTCTGCTTCTCATCCTCCTTTTCCAACTGTCCACTTCCAAGGACACCATAACATGGAACGAAGAGCATGTAAAAGATGGTGACCTTTTAGTGTCCAAAGGAAACAACTTCGAATTGGGTTTCTTCAGCCCCAGAAACTCTAGCTACCGCTATGTTGGAATTTGGTATTCCATGTCTCAGATATCTGACCAAACAGTGGTGTGGGTGGCAAACAGAAACAACCCCATCAATGATACATCAGGTGTTCTCACAATAAACAGGTATGGAAAACTAGTCATTTATGCTCACAATATGGAGAATATTCCTATATGGTCTGCAAATATGTCTCAGTCAGTCATAAACACAAACCCCTTATCTGCACAACTTTTAGATACAGGAAACTTAGTTCTGACCCAGGATGGTGAAAGTGAAAGCTTTATTATGTGGCAGAGTTTTGATTATCCTACAGATACTCTAATCCCTGGTATGAAACTTGGGGTGAGTTGGAAAACTGGTTTAGAGTGGTTTTTAACATCATGGAAGTCACAAGATGACCCTGGAACTGGGGACTATAGCCATAGGCTTTATTGGAACCAGACGGCTATGCTACAATATTTTCTGTTCAAGGGTTTAACTACTAGGGTTTGGAGAGGTGATCCTGGGCCTTGGCGCAGTTTTGTTAGTAATAATGATGAAACGTATTACCTACAATCTAGTGATAACTCCACTATAAAATTTAGAATGGTTGTGAATGATTCTGGGTTATTGCAGCATTTGACATGGAATGATGGTGACCATCAATGGAAGGAACTATGGGCTGCACCGAAATACCGTTGTGACTTGTATGGACAATGTGGTGCCTATAGTGAATGTAACCCTGACAATATTAATATGTTTGAGTGTGAGTGTTTACCAGGGTATGAACCTAAATCTATAAATGACTGGAATCAGAATGATGGGTCAGAGGGGTGTCTGAGTAAGCGAGTTGGAGTGTCAAAGTGTGGAGTTAGAGATGGGTTTTTAGAGGTGGCAAGGGTGAAAGCTCCAGACACATCGACAGTAGTAGCACGACTGGATACTGGTATGAGTGCCAAAGAGTGCAAGCAGGAATGTTTGAGAAATTGTTCTTGCACAGCATGTATGAGCATCAATAATAAAGGGCGCATTGATTGCTTGACATGGTATGGTGAGCTGTTGGATATTGTGAAGCACACGGATGGAGGACAAGTTCTATATGTTCGTGTGGATGAAATTGAGTTAGCTATGTATTCCAGAAAATCAGAAGGTTTTTTGGAAAGGAGGGGCATGCTGGCTATTCCAATATTGTCTGGTCTGCTGGTGCTGGTACTAATCCCTGTGTTTGGCTGTTGGTGGCTTAAGAAAAGAAGGAAAACAAAAGACTTTGCAGTGGCGGATGAACTTGGAAAAGCTAGGAAACACCCTGATCTGCAATTTTTCTCTCTGAGCACAATAATTGTAGCCACAGGCAACTTCCATTCTGGAAATAAACTCGGGGAAGGTGGTTTTATTGGATCTGTTTATAAGGGTCAGTTACCAAATGGACAGGAGATTGCTGTGAAAAGATTGTCCAAAACTTCAGGGCAAGGGATTGAAGAATTCAAAAATGAAGTTGTGCTTATAGAAAGACTTCAACACAGGAACCTTGTGAAACTTTTGGGTTGTTGCATAGCGGGAGAAGAAAAGATGTTGGTCCTTGAATACTTGTCGAACAAAAGCTTGGACTTCTTTCTTTTTGATGACACAAGAAGGTCCTCTTTGGATTGGAAAAAGCGCTTTGAAATCATCAATGGGATTGCTCGTGGGATTCTTTATCTTCACCAGGACTCGAGAGTTAGAATTATCCATAGGGATCTAAAAACCAGCAATATTCTTCTAGATGCTGAGATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATATTTTATGGGGACCAATTGCAGGATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0016020 GO:0023052 GO:0038023 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

654

Amino Acids

74.36

Weight (kDa)

6.45

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	69 - 178	1.5e-35	D-mannose binding lectin
S_locus_glycop	PF00954	222 - 308	1.8e-18	S-locus glycoprotein domain
PAN_2	PF08276	331 - 398	1.1e-15	PAN-like domain
Pkinase	PF00069	495 - 648	5.8e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	497 - 649	5.2e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0021439)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0017751
rosa_laevigata	RLG00000032311
rosa_rugosa	Rorug05G0038300
rosa_samantha	Rh5BG129300 Rh5CG141700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1533
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	2 cut(s)	66, 208
AciI	CCGC	3 cut(s)	160, 1403, 1682
AclWI	GGATC	3 cut(s)	641, 1531, 1869
AcsI	RAATTY	4 cut(s)	171, 725, 1607, 1908
AcuI	CTGAAG	2 cut(s)	121, 1572
AfaI	GTAC	1 cut(s)	1338
AfeI	AGCGCT	1 cut(s)	1784
AfiI	CCNNNNNNNGG	5 cut(s)	66, 208, 554, 1352, 1954
AflII	CTTAAG	1 cut(s)	1367
AgsI	TTSAA	6 cut(s)	616, 1604, 1612, 1643, 1709, 1790
AhlI	ACTAGT	1 cut(s)	283
AjnI	CCWGG	6 cut(s)	405, 472, 547, 649, 904, 1830
AjuI	GAANNNNNNNTTGG	2 cut(s)	1712, 1744
AloI	GAACNNNNNNTCC	4 cut(s)	381, 413, 1203, 1235
AluBI	AGCT	8 cut(s)	14, 156, 426, 1034, 1183, 1253, 1421, 1728
AluI	AGCT	8 cut(s)	14, 156, 426, 1034, 1183, 1253, 1421, 1728
Alw21I	GWGCWC	1 cut(s)	1460
Alw26I	GTCTC	2 cut(s)	192, 342
AlwI	GGATC	3 cut(s)	641, 1531, 1869
Ama87I	CYCGRG	2 cut(s)	1502, 1837
Aor51HI	AGCGCT	1 cut(s)	1784
AoxI	GGCC	1 cut(s)	653
ApeKI	GCWGC	2 cut(s)	760, 809
ApoI	RAATTY	4 cut(s)	171, 725, 1607, 1908
AseI	ATTAAT	1 cut(s)	879
Asp700I	GAANNNNTTC	2 cut(s)	1114, 1638
AspLEI	GCGC	3 cut(s)	663, 1155, 1785
AspS9I	GGNCC	4 cut(s)	653, 1702, 1761, 1945
AsuHPI	GGTGA	8 cut(s)	104, 425, 502, 656, 794, 1039, 1190, 1820
AsuII	TTCGAA	1 cut(s)	123
AvaI	CYCGRG	2 cut(s)	1502, 1837
AvaII	GGWCC	3 cut(s)	1702, 1761, 1945
BanI	GGYRCC	1 cut(s)	848
BauI	CACGAG	1 cut(s)	1809
Bbv12I	GWGCWC	1 cut(s)	1460
BbvI	GCAGC	2 cut(s)	772, 796
BccI	CCATC	8 cut(s)	83, 245, 404, 773, 795, 941, 998, 1202
BceAI	ACGGC	1 cut(s)	606
BciT130I	CCWGG	6 cut(s)	407, 474, 549, 651, 906, 1832
BciVI	GTATCC	1 cut(s)	1060
BcoDI	GTCTC	2 cut(s)	192, 342
BcuI	ACTAGT	1 cut(s)	283
BfaI	CTAG	6 cut(s)	153, 284, 630, 705, 1422, 1886
BfmI	CTRYAG	3 cut(s)	456, 562, 853
BfoI	RGCGCY	1 cut(s)	1786
BfrI	CTTAAG	1 cut(s)	1367
BfuI	GTATCC	1 cut(s)	1060
BisI	GCNGC	2 cut(s)	761, 810
BlsI	GCNGC	2 cut(s)	762, 811
Bme1390I	CCNGG	6 cut(s)	407, 474, 549, 651, 906, 1832
Bme18I	GGWCC	3 cut(s)	1702, 1761, 1945
BmeT110I	CYCGRG	2 cut(s)	1502, 1837
BmgT120I	GGNCC	4 cut(s)	653, 1702, 1761, 1945
BmiI	GGNNCC	4 cut(s)	584, 850, 1652, 1946
BmrFI	CCNGG	6 cut(s)	407, 474, 549, 651, 906, 1832
BmrI	ACTGGG	1 cut(s)	564
BmsI	GCATC	2 cut(s)	1146, 1879
BmuI	ACTGGG	1 cut(s)	564
BpmI	CTGGAG	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	123
BsaJI	CCNNGG	7 cut(s)	51, 405, 472, 547, 650, 656, 905
BsaXI	ACNNNNNCTCC	2 cut(s)	1203, 1233
Bsc4I	CCNNNNNNNGG	5 cut(s)	66, 208, 554, 1352, 1954
Bse1I	ACTGG	5 cut(s)	508, 559, 938, 1068, 1075
BseBI	CCWGG	6 cut(s)	407, 474, 549, 651, 906, 1832
BseDI	CCNNGG	7 cut(s)	51, 405, 472, 547, 650, 656, 905
BseGI	GGATG	5 cut(s)	24, 415, 1213, 1243, 1411
BseLI	CCNNNNNNNGG	5 cut(s)	66, 208, 554, 1352, 1954
BseMII	CTCAG	5 cut(s)	203, 353, 956, 1445, 1884
BseNI	ACTGG	5 cut(s)	508, 559, 938, 1068, 1075
BseXI	GCAGC	2 cut(s)	772, 796
BsgI	GTGCAG	2 cut(s)	354, 795
BshFI	GGCC	1 cut(s)	655
BshNI	GGYRCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	1460
BsiHKCI	CYCGRG	2 cut(s)	1502, 1837
BslFI	GGGAC	2 cut(s)	572, 1958
BslI	CCNNNNNNNGG	5 cut(s)	66, 208, 554, 1352, 1954
BsmAI	GTCTC	2 cut(s)	192, 342
BsmFI	GGGAC	2 cut(s)	572, 1958
BsnI	GGCC	1 cut(s)	655
BsoBI	CYCGRG	2 cut(s)	1502, 1837
Bsp119I	TTCGAA	1 cut(s)	123
Bsp1286I	GDGCHC	1 cut(s)	1460
Bsp143I	GATC	4 cut(s)	646, 1435, 1523, 1861
BspACI	CCGC	3 cut(s)	160, 1403, 1682
BspANI	GGCC	1 cut(s)	655
BspCNI	CTCAG	5 cut(s)	202, 352, 957, 1446, 1885
BspLI	GGNNCC	4 cut(s)	584, 850, 1652, 1946
BspPI	GGATC	3 cut(s)	641, 1531, 1869
BspQI	GCTCTTC	1 cut(s)	69
BspT104I	TTCGAA	1 cut(s)	123
BspT107I	GGYRCC	1 cut(s)	848
BspTI	CTTAAG	1 cut(s)	1367
BsrI	ACTGG	5 cut(s)	508, 559, 938, 1068, 1075
BssECI	CCNNGG	7 cut(s)	51, 405, 472, 547, 650, 656, 905
BssMI	GATC	4 cut(s)	646, 1435, 1523, 1861
BssSI	CACGAG	1 cut(s)	1809
BssT1I	CCWWGG	2 cut(s)	51, 656
Bst2BI	CACGAG	1 cut(s)	1809
Bst2UI	CCWGG	6 cut(s)	407, 474, 549, 651, 906, 1832
Bst4CI	ACNGT	4 cut(s)	42, 208, 824, 1051
Bst6I	CTCTTC	1 cut(s)	69
BstAFI	CTTAAG	1 cut(s)	1367
BstAPI	GCANNNNNTGC	1 cut(s)	1161
BstBI	TTCGAA	1 cut(s)	123
BstC8I	GCNNGC	3 cut(s)	1094, 1298, 1302
BstDEI	CTNAG	6 cut(s)	189, 339, 394, 965, 1454, 1893
BstEII	GGTNACC	2 cut(s)	92, 782
BstF5I	GGATG	5 cut(s)	24, 415, 1213, 1243, 1411
BstH2I	RGCGCY	1 cut(s)	1786
BstHHI	GCGC	3 cut(s)	663, 1155, 1785
BstKTI	GATC	4 cut(s)	649, 1438, 1526, 1864
BstMAI	GTCTC	2 cut(s)	192, 342
BstMBI	GATC	4 cut(s)	646, 1435, 1523, 1861
BstMWI	GCNNNNNNNGC	1 cut(s)	1161
BstNI	CCWGG	6 cut(s)	407, 474, 549, 651, 906, 1832
BstNSI	RCATGY	3 cut(s)	83, 1131, 1300
BstPI	GGTNACC	2 cut(s)	92, 782
BstSCI	CCNGG	6 cut(s)	405, 472, 547, 649, 904, 1830
BstSFI	CTRYAG	3 cut(s)	456, 562, 853
BstV1I	GCAGC	2 cut(s)	772, 796
BstX2I	RGATCY	2 cut(s)	1523, 1861
BstYI	RGATCY	2 cut(s)	1523, 1861
BsuI	GTATCC	1 cut(s)	1060
BsuRI	GGCC	1 cut(s)	655
BtsCI	GGATG	5 cut(s)	24, 415, 1213, 1243, 1411
BtsI	GCAGTG	1 cut(s)	1404
BtsIMutI	CAGTG	2 cut(s)	213, 1404
Cac8I	GCNNGC	3 cut(s)	1094, 1298, 1302
CfoI	GCGC	3 cut(s)	663, 1155, 1785
Cfr13I	GGNCC	4 cut(s)	653, 1702, 1761, 1945
Csp6I	GTAC	1 cut(s)	1337
CviAII	CATG	9 cut(s)	66, 80, 184, 528, 771, 1128, 1170, 1297, 1924
CviQI	GTAC	1 cut(s)	1337
DdeI	CTNAG	6 cut(s)	189, 339, 394, 965, 1454, 1893
DpnI	GATC	4 cut(s)	648, 1437, 1525, 1863
DpnII	GATC	4 cut(s)	646, 1435, 1523, 1861
Eam1104I	CTCTTC	1 cut(s)	69
EarI	CTCTTC	1 cut(s)	69
EciI	GGCGGA	1 cut(s)	1418
Eco130I	CCWWGG	2 cut(s)	51, 656
Eco32I	GATATC	1 cut(s)	195
Eco47I	GGWCC	3 cut(s)	1702, 1761, 1945
Eco47III	AGCGCT	1 cut(s)	1784
Eco57I	CTGAAG	2 cut(s)	121, 1572
Eco88I	CYCGRG	2 cut(s)	1502, 1837
Eco91I	GGTNACC	2 cut(s)	92, 782
EcoO109I	RGGNCCY	1 cut(s)	1761
EcoO65I	GGTNACC	2 cut(s)	92, 782
EcoRI	GAATTC	1 cut(s)	1607
EcoRII	CCWGG	6 cut(s)	405, 472, 547, 649, 904, 1830
EcoRV	GATATC	1 cut(s)	195
EcoT14I	CCWWGG	2 cut(s)	51, 656
ErhI	CCWWGG	2 cut(s)	51, 656
FaeI	CATG	9 cut(s)	69, 83, 187, 531, 774, 1131, 1173, 1300, 1927
FalI	AAGNNNNNCTT	5 cut(s)	35, 1611, 1643, 1750, 1782
FaqI	GGGAC	2 cut(s)	572, 1958
FatI	CATG	9 cut(s)	65, 79, 183, 527, 770, 1127, 1169, 1296, 1923
FauI	CCCGC	1 cut(s)	1675
Fnu4HI	GCNGC	2 cut(s)	761, 810
FokI	GGATG	5 cut(s)	11, 422, 1220, 1250, 1418
Fsp4HI	GCNGC	2 cut(s)	761, 810
FspBI	CTAG	6 cut(s)	153, 284, 630, 705, 1422, 1886
GlaI	GCGC	3 cut(s)	662, 1154, 1784
GluI	GCNGC	2 cut(s)	761, 810
GsuI	CTGGAG	1 cut(s)	1020
HaeII	RGCGCY	1 cut(s)	1786
HaeIII	GGCC	1 cut(s)	655
HhaI	GCGC	3 cut(s)	663, 1155, 1785
Hin1II	CATG	9 cut(s)	69, 83, 187, 531, 774, 1131, 1173, 1300, 1927
Hin6I	GCGC	3 cut(s)	661, 1153, 1783
HinP1I	GCGC	3 cut(s)	661, 1153, 1783
HindIII	AAGCTT	2 cut(s)	424, 1726
HinfI	GANTC	4 cut(s)	746, 937, 1816, 1835
HphI	GGTGA	8 cut(s)	104, 425, 502, 656, 794, 1039, 1190, 1820
Hpy166II	GTNNAC	2 cut(s)	45, 902
Hpy188I	TCNGA	9 cut(s)	192, 199, 402, 942, 955, 966, 1273, 1455, 1915
Hpy188III	TCNNGA	5 cut(s)	1037, 1263, 1491, 1839, 1886
Hpy8I	GTNNAC	2 cut(s)	45, 902
HpyAV	CCTTC	5 cut(s)	790, 1268, 1371, 1502, 1752
HpyCH4III	ACNGT	4 cut(s)	42, 208, 824, 1051
HpyCH4IV	ACGT	1 cut(s)	689
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1161
HpyF3I	CTNAG	6 cut(s)	189, 339, 394, 965, 1454, 1893
HpySE526I	ACGT	1 cut(s)	689
Hsp92II	CATG	9 cut(s)	69, 83, 187, 531, 774, 1131, 1173, 1300, 1927
HspAI	GCGC	3 cut(s)	661, 1153, 1783
Kzo9I	GATC	4 cut(s)	646, 1435, 1523, 1861
LguI	GCTCTTC	1 cut(s)	69
LmnI	GCTCC	1 cut(s)	1039
Lsp1109I	GCAGC	2 cut(s)	772, 796
LweI	GCATC	2 cut(s)	1146, 1879
MaeI	CTAG	6 cut(s)	153, 284, 630, 705, 1422, 1886
MaeII	ACGT	1 cut(s)	689
MaeIII	GTNAC	7 cut(s)	3, 92, 534, 782, 827, 863, 1542
MalI	GATC	4 cut(s)	648, 1437, 1525, 1863
MboI	GATC	4 cut(s)	646, 1435, 1523, 1861
MboII	GAAGA	6 cut(s)	86, 127, 1616, 1700, 1817, 1874
MfeI	CAATTG	1 cut(s)	1949
MflI	RGATCY	2 cut(s)	1523, 1861
MhlI	GDGCHC	1 cut(s)	1460
MlyI	GAGTC	1 cut(s)	1829
MmeI	TCCRAC	5 cut(s)	61, 148, 476, 958, 1167
MnlI	CCTC	7 cut(s)	38, 635, 949, 1009, 1205, 1284, 1774
MroXI	GAANNNNTTC	2 cut(s)	1114, 1638
MseI	TTAA	4 cut(s)	521, 623, 879, 1368
MslI	CAYNNNNRTG	1 cut(s)	1206
MspCI	CTTAAG	1 cut(s)	1367
MspR9I	CCNGG	6 cut(s)	407, 474, 549, 651, 906, 1832
MunI	CAATTG	1 cut(s)	1949
MvaI	CCWGG	6 cut(s)	407, 474, 549, 651, 906, 1832
MwoI	GCNNNNNNNGC	1 cut(s)	1161
NdeII	GATC	4 cut(s)	646, 1435, 1523, 1861
NlaIII	CATG	9 cut(s)	69, 83, 187, 531, 774, 1131, 1173, 1300, 1927
NlaIV	GGNNCC	4 cut(s)	584, 850, 1652, 1946
NmuCI	GTSAC	4 cut(s)	92, 534, 782, 827
NspI	RCATGY	3 cut(s)	83, 1131, 1300
NspV	TTCGAA	1 cut(s)	123
PaeI	GCATGC	1 cut(s)	1300
PaeR7I	CTCGAG	1 cut(s)	1837
PciSI	GCTCTTC	1 cut(s)	69
PdmI	GAANNNNTTC	2 cut(s)	1114, 1638
PfeI	GAWTC	3 cut(s)	746, 937, 1816
PflMI	CCANNNNNTGG	2 cut(s)	66, 208
PkrI	GCNGC	2 cut(s)	762, 811
PleI	GAGTC	1 cut(s)	1829
PpsI	GAGTC	1 cut(s)	1829
PpuMI	RGGWCCY	1 cut(s)	1761
PshBI	ATTAAT	1 cut(s)	879
PsiI	TTATAA	1 cut(s)	1533
Psp5II	RGGWCCY	1 cut(s)	1761
Psp6I	CCWGG	6 cut(s)	405, 472, 547, 649, 904, 1830
PspEI	GGTNACC	2 cut(s)	92, 782
PspGI	CCWGG	6 cut(s)	405, 472, 547, 649, 904, 1830
PspN4I	GGNNCC	4 cut(s)	584, 850, 1652, 1946
PspPI	GGNCC	4 cut(s)	653, 1702, 1761, 1945
PspPPI	RGGWCCY	1 cut(s)	1761
PsuI	RGATCY	2 cut(s)	1523, 1861
RsaI	GTAC	1 cut(s)	1338
RsaNI	GTAC	1 cut(s)	1337
RseI	CAYNNNNRTG	1 cut(s)	1206
SapI	GCTCTTC	1 cut(s)	69
SaqAI	TTAA	4 cut(s)	521, 623, 879, 1368
SatI	GCNGC	2 cut(s)	761, 810
Sau3AI	GATC	4 cut(s)	646, 1435, 1523, 1861
Sau96I	GGNCC	4 cut(s)	653, 1702, 1761, 1945
SchI	GAGTC	1 cut(s)	1829
ScrFI	CCNGG	6 cut(s)	407, 474, 549, 651, 906, 1832
SduI	GDGCHC	1 cut(s)	1460
SfaNI	GCATC	2 cut(s)	1146, 1879
SfcI	CTRYAG	3 cut(s)	456, 562, 853
Sfr274I	CTCGAG	1 cut(s)	1837
SfuI	TTCGAA	1 cut(s)	123
SinI	GGWCC	3 cut(s)	1702, 1761, 1945
SlaI	CTCGAG	1 cut(s)	1837
SmiMI	CAYNNNNRTG	1 cut(s)	1206
SmlI	CTYRAG	2 cut(s)	1367, 1837
SmoI	CTYRAG	2 cut(s)	1367, 1837
SpeI	ACTAGT	1 cut(s)	283
SphI	GCATGC	1 cut(s)	1300
SsiI	CCGC	3 cut(s)	160, 1403, 1682
SspI	AATATT	6 cut(s)	313, 605, 877, 1314, 1879, 1935
SspMI	CTAG	6 cut(s)	153, 284, 630, 705, 1422, 1886
StyD4I	CCNGG	6 cut(s)	405, 472, 547, 649, 904, 1830
StyI	CCWWGG	2 cut(s)	51, 656
TaaI	ACNGT	4 cut(s)	42, 208, 824, 1051
TaiI	ACGT	1 cut(s)	692
TaqI	TCGA	4 cut(s)	123, 1046, 1718, 1838
TfiI	GAWTC	3 cut(s)	746, 937, 1816
Tru1I	TTAA	4 cut(s)	521, 623, 879, 1368
Tru9I	TTAA	4 cut(s)	521, 623, 879, 1368
TscAI	CASTG	2 cut(s)	213, 1404
TseFI	GTSAC	4 cut(s)	92, 534, 782, 827
TseI	GCWGC	2 cut(s)	760, 809
Tsp45I	GTSAC	4 cut(s)	92, 534, 782, 827
TspDTI	ATGAA	7 cut(s)	494, 699, 927, 1254, 1422, 1632, 1913
TspGWI	ACGGA	1 cut(s)	1220
TspRI	CASTG	2 cut(s)	213, 1404
Van91I	CCANNNNNTGG	2 cut(s)	66, 208
Vha464I	CTTAAG	1 cut(s)	1367
VpaK11BI	GGWCC	3 cut(s)	1702, 1761, 1945
VspI	ATTAAT	1 cut(s)	879
XapI	RAATTY	4 cut(s)	171, 725, 1607, 1908
XbaI	TCTAGA	1 cut(s)	1885
XceI	RCATGY	3 cut(s)	83, 1131, 1300
XhoI	CTCGAG	1 cut(s)	1837
XmnI	GAANNNNTTC	2 cut(s)	1114, 1638
XspI	CTAG	6 cut(s)	153, 284, 630, 705, 1422, 1886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.