Cullin family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g17070 FvH4_3g17070 FvH4_3g17070 |
| rosa_chinensis | RchiOBHm_Chr5g0028421 |
| rosa_laevigata | RLG00000033093 |
| rosa_multiflora | Rmu_sc0006771.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00051260 |
| rosa_rugosa | Rorug05G0107500 |
| rosa_samantha | Rh5AG200300 Rh5BG198700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AciI | CCGC | 4 cut(s) | 309, 317, 320, 341 |
| AcsI | RAATTY | 1 cut(s) | 245 |
| AdeI | CACNNNGTG | 1 cut(s) | 61 |
| AfaI | GTAC | 2 cut(s) | 83, 355 |
| AgeI | ACCGGT | 1 cut(s) | 142 |
| AgsI | TTSAA | 2 cut(s) | 71, 245 |
| AluBI | AGCT | 1 cut(s) | 450 |
| AluI | AGCT | 1 cut(s) | 450 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| AoxI | GGCC | 1 cut(s) | 434 |
| ApoI | RAATTY | 1 cut(s) | 245 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 230, 262 |
| AsiGI | ACCGGT | 1 cut(s) | 142 |
| AspLEI | GCGC | 1 cut(s) | 271 |
| AspS9I | GGNCC | 4 cut(s) | 106, 257, 402, 434 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 108, 206, 212 |
| AvaII | GGWCC | 3 cut(s) | 106, 257, 402 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BccI | CCATC | 1 cut(s) | 224 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BisI | GCNGC | 1 cut(s) | 318 |
| BlsI | GCNGC | 1 cut(s) | 319 |
| Bme18I | GGWCC | 3 cut(s) | 106, 257, 402 |
| BmgT120I | GGNCC | 4 cut(s) | 106, 257, 402, 434 |
| BmiI | GGNNCC | 3 cut(s) | 93, 108, 258 |
| BmrI | ACTGGG | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 54 |
| BmuI | ACTGGG | 1 cut(s) | 67 |
| BsaI | GGTCTC | 1 cut(s) | 328 |
| BsaJI | CCNNGG | 1 cut(s) | 20 |
| BsaWI | WCCGGW | 2 cut(s) | 132, 142 |
| Bse118I | RCCGGY | 1 cut(s) | 142 |
| Bse1I | ACTGG | 2 cut(s) | 62, 361 |
| BseDI | CCNNGG | 1 cut(s) | 20 |
| BseGI | GGATG | 2 cut(s) | 129, 326 |
| BseNI | ACTGG | 2 cut(s) | 62, 361 |
| BseRI | GAGGAG | 1 cut(s) | 9 |
| BshFI | GGCC | 1 cut(s) | 436 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BshTI | ACCGGT | 1 cut(s) | 142 |
| BsiSI | CCGG | 2 cut(s) | 133, 143 |
| BslFI | GGGAC | 2 cut(s) | 92, 251 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| BsmFI | GGGAC | 2 cut(s) | 92, 251 |
| BsnI | GGCC | 1 cut(s) | 436 |
| Bso31I | GGTCTC | 1 cut(s) | 328 |
| Bsp143I | GATC | 2 cut(s) | 3, 349 |
| BspACI | CCGC | 4 cut(s) | 309, 317, 320, 341 |
| BspANI | GGCC | 1 cut(s) | 436 |
| BspLI | GGNNCC | 3 cut(s) | 93, 108, 258 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BspTNI | GGTCTC | 1 cut(s) | 328 |
| BsrFI | RCCGGY | 1 cut(s) | 142 |
| BsrI | ACTGG | 2 cut(s) | 62, 361 |
| BssAI | RCCGGY | 1 cut(s) | 142 |
| BssECI | CCNNGG | 1 cut(s) | 20 |
| BssMI | GATC | 2 cut(s) | 3, 349 |
| BstF5I | GGATG | 2 cut(s) | 129, 326 |
| BstHHI | GCGC | 1 cut(s) | 271 |
| BstKTI | GATC | 2 cut(s) | 6, 352 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMBI | GATC | 2 cut(s) | 3, 349 |
| BsuRI | GGCC | 1 cut(s) | 436 |
| BtsCI | GGATG | 2 cut(s) | 129, 326 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| CfoI | GCGC | 1 cut(s) | 271 |
| Cfr10I | RCCGGY | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 4 cut(s) | 106, 257, 402, 434 |
| CseI | GACGC | 1 cut(s) | 83 |
| Csp6I | GTAC | 2 cut(s) | 82, 354 |
| CspAI | ACCGGT | 1 cut(s) | 142 |
| CviJI | RGCY | 5 cut(s) | 161, 301, 395, 436, 450 |
| CviKI_1 | RGCY | 5 cut(s) | 161, 301, 395, 436, 450 |
| CviQI | GTAC | 2 cut(s) | 82, 354 |
| DpnI | GATC | 2 cut(s) | 5, 351 |
| DpnII | GATC | 2 cut(s) | 3, 349 |
| DraIII | CACNNNGTG | 1 cut(s) | 61 |
| Eco31I | GGTCTC | 1 cut(s) | 328 |
| Eco47I | GGWCC | 3 cut(s) | 106, 257, 402 |
| EcoO109I | RGGNCCY | 1 cut(s) | 257 |
| EcoRI | GAATTC | 1 cut(s) | 245 |
| FaiI | YATR | 2 cut(s) | 140, 254 |
| FaqI | GGGAC | 2 cut(s) | 92, 251 |
| Fnu4HI | GCNGC | 1 cut(s) | 318 |
| FokI | GGATG | 2 cut(s) | 116, 313 |
| Fsp4HI | GCNGC | 1 cut(s) | 318 |
| GlaI | GCGC | 1 cut(s) | 270 |
| GluI | GCNGC | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 436 |
| HapII | CCGG | 2 cut(s) | 133, 143 |
| HgaI | GACGC | 1 cut(s) | 83 |
| HhaI | GCGC | 1 cut(s) | 271 |
| Hin6I | GCGC | 1 cut(s) | 269 |
| HinP1I | GCGC | 1 cut(s) | 269 |
| HpaII | CCGG | 2 cut(s) | 133, 143 |
| HphI | GGTGA | 4 cut(s) | 73, 108, 206, 212 |
| Hpy166II | GTNNAC | 2 cut(s) | 43, 82 |
| Hpy188I | TCNGA | 3 cut(s) | 24, 229, 286 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 220 |
| Hpy8I | GTNNAC | 2 cut(s) | 43, 82 |
| HpyAV | CCTTC | 3 cut(s) | 191, 270, 340 |
| HpyCH4V | TGCA | 3 cut(s) | 55, 210, 347 |
| HspAI | GCGC | 1 cut(s) | 269 |
| Kzo9I | GATC | 2 cut(s) | 3, 349 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| LpnPI | CCDG | 7 cut(s) | 43, 108, 143, 146, 156, 205, 342 |
| LweI | GCATC | 1 cut(s) | 54 |
| MaeIII | GTNAC | 1 cut(s) | 8 |
| MalI | GATC | 2 cut(s) | 5, 351 |
| MboI | GATC | 2 cut(s) | 3, 349 |
| MboII | GAAGA | 1 cut(s) | 146 |
| MluCI | AATT | 1 cut(s) | 245 |
| MmeI | TCCRAC | 1 cut(s) | 264 |
| MnlI | CCTC | 5 cut(s) | 30, 227, 274, 419, 447 |
| MseI | TTAA | 2 cut(s) | 32, 457 |
| MspI | CCGG | 2 cut(s) | 133, 143 |
| NdeII | GATC | 2 cut(s) | 3, 349 |
| NlaIV | GGNNCC | 3 cut(s) | 93, 108, 258 |
| PinAI | ACCGGT | 1 cut(s) | 142 |
| PkrI | GCNGC | 1 cut(s) | 319 |
| PpuMI | RGGWCCY | 1 cut(s) | 257 |
| Psp5II | RGGWCCY | 1 cut(s) | 257 |
| PspN4I | GGNNCC | 3 cut(s) | 93, 108, 258 |
| PspPI | GGNCC | 4 cut(s) | 106, 257, 402, 434 |
| PspPPI | RGGWCCY | 1 cut(s) | 257 |
| RsaI | GTAC | 2 cut(s) | 83, 355 |
| RsaNI | GTAC | 2 cut(s) | 82, 354 |
| SaqAI | TTAA | 2 cut(s) | 32, 457 |
| SatI | GCNGC | 1 cut(s) | 318 |
| Sau3AI | GATC | 2 cut(s) | 3, 349 |
| Sau96I | GGNCC | 4 cut(s) | 106, 257, 402, 434 |
| SetI | ASST | 6 cut(s) | 87, 121, 202, 219, 430, 452 |
| SfaNI | GCATC | 1 cut(s) | 54 |
| SinI | GGWCC | 3 cut(s) | 106, 257, 402 |
| Sse9I | AATT | 1 cut(s) | 245 |
| SsiI | CCGC | 4 cut(s) | 309, 317, 320, 341 |
| TaqI | TCGA | 3 cut(s) | 187, 249, 275 |
| TaqII | GACCGA | 1 cut(s) | 390 |
| TasI | AATT | 1 cut(s) | 245 |
| TauI | GCSGC | 1 cut(s) | 320 |
| Tru1I | TTAA | 2 cut(s) | 32, 457 |
| Tru9I | TTAA | 2 cut(s) | 32, 457 |
| TscAI | CASTG | 1 cut(s) | 62 |
| TspDTI | ATGAA | 1 cut(s) | 118 |
| TspRI | CASTG | 1 cut(s) | 62 |
| VpaK11BI | GGWCC | 3 cut(s) | 106, 257, 402 |
| XapI | RAATTY | 1 cut(s) | 245 |