Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0017979

Physical Location & Seq

Genomic Coordinates Reverse (-)

76482207 .. 76487546

Gene Structure 5340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0571800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGCAAATCCTTTCGCATTTCTCTTCCAAAGCCTACTCACCTTCTTCTCTCCTTCCCTCTCTCACCTCCGCCCTCATCTTCCGCCGTCGCCCCCCGAATTTCCCCTTTTACCCCTCCACTCCCTTCAAATTTCCCACCCTCGCATGCCACCTCAGCTCCGCCGGCCATAGCCCCCAACAAGCAGCAGCTCCCATGGACTCGCCGCCGCCACCGACAGAGGCCTCCGTCGACGCCGTCACGCGCGATTTGCGCAACCAGAGCTTGGCCGCCGACGGTGGGAATAACGCGCCGAGAGCGCGGTTGAAGCTTGAAGATCTGAACTGGGATAACTCGTTTGTTAGAGAGTTGCCTGGTGATCCCAGGACCGATACGTTTCCGCGAGAGGTGTTGCATGCCTGTTTTACAAAAGTAACCCCGTCAGCTCAAGTTGATGATCCTCAGCTCGTTGCCTGGTCAGAGTCGGTTGCTGAGTTGTTTGAATTGGATCCTCAAGAATTTGAAAGGCCAGATTTCCCCCTTTTATTCTCTGGAGCGTCTCCTTTAGTTGGATCGTCACCCTATGCTCAATGCTATGGAGGACATCAGTTCGGCATGTGGGCGGGACAGTTGGGAGATGGTCGAGCTATTACACTCGGGGAGGTTCTTAACTCTAAATCTGAAAGGTGGGAACTACAGCTTAAAGGTGCTGGAAAGACCCCTTACAGCCGGTTTGCAGATGGCCTTGCTGTGCTTCGTAGTAGCATTCGGGAATTCCTCTGCAGTGAAGCAATGCATAGTCTTGGAATTCCAACAACTCGTGCTCTATGTCTTGTGACAACTGGAAAACTTGTCACCCGTGACATGTTTTATGATGGCAATCCAAAGGAGGAGCCAGGTGCAATTGTTTGCAGGGTTGCTCCATCCTTCCTGCGCTTTGGATCCTACCAAATACACGCCTCTAGGGAAAATGAGGACCTTGCCATTGTTCGTACTCTAGCAGACTATACCATTAGGCATCACTTCCCTCATATAGAGAACATGAGTAAAAGTGAGAGTTTGTCTTTCAGTACAGGCAATGACGAACATTCAGTCGTTGATCTAACGTCTAACAAGTATGCAGCCTGGGTAGTGGAGGTTGCTGAACGTACTGCGTCCTTGGTTGCCAAATGGCAGGGGGTTGGTTTTACTCATGGTGTGTTGAACACTGACAATATGAGTATTTTGGGCCTCACCATTGATTATGGTCCTTTTGGATTTCTGGATGCATTCGATCCAAGTTACACTCCGAATACAACTGATCTTCCTGGGAGGAGATATTGTTTTGCAAACCAACCTGATATTGGCTTATGGAATATTATGCAATTAACCAGAACCTTGTCATCTGCCGAGTTGATAAATGAGAAGGAGGCAAACTATGCAATGGAAAGATATGGAACTAGATTCATGGATGATTATCAAGCTATAATGACAAAAAAGCTTGGTCTCCCCAAGTATGTCAAACAGTTGATCAGTAAACTTCTTAATAATATGGCTGTTGACAAAGTGGATTACACAAACTTTTTCCGGTTGCTTTCCAATATCAAAGCTGATCCCAGCATCCCAGATGAGGAGTTGTTAAACCCACTAAAGGCTGTTTTATTAGATATTGGCCAGGAGCGGAAGGAGGCATGGATCAGCTGGGTGAGAATCTACATAGAGGAGCTATCTGCTAGTGGCATCCCAGATGAGGAGAGGAAGGCCTCAATGAATGCGGTGAACCCTAAATATGTTCTGAGAAACTACTTATGCCAGAGTGCTATTGATGCAGCTGAACAAGGTGATTTTGGAGAGGTTCGAAGGGTCCTTAAAGTAATGGAACGACCATTTGATGAGCAACCGGGAATGGAAAAATATGCTCGCTTGCCCCCAGCGTGGGCTTACCGGCCTGGAGTTTGCATGCTTTCTTGCTCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

644

Amino Acids

71.83

Weight (kDa)

5.61

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SelO	PF02696	131 - 609	7.9e-124	Protein adenylyltransferase SelO

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017979)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g05940
rosa_chinensis	RchiOBHm_Chr6g0257461
rosa_laevigata	RLG00000014700
rosa_multiflora	Rmu_sc0003301.1_g000016
rosa_roxburghii	Rroxscaffold_7G00208790
rosa_rugosa	Rorug05G0571800
rosa_samantha	Rh6AG089700 Rh6BG081200 Rh6CG077900 Rh6DG073600
rosa_wichuraiana	Rw6G007830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	251
AccB7I	CCANNNNNTGG	1 cut(s)	262
AccBSI	CCGCTC	1 cut(s)	1636
AccI	GTMKAC	1 cut(s)	228
AccII	CGCG	5 cut(s)	241, 243, 287, 298, 379
AcoI	YGGCCR	3 cut(s)	163, 264, 1627
AcsI	RAATTY	5 cut(s)	97, 128, 494, 749, 783
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	3 cut(s)	970, 1048, 1126
AfiI	CCNNNNNNNGG	9 cut(s)	262, 276, 545, 1319, 1585, 1606, 1705, 1890, 1891
AflIII	ACRYGT	1 cut(s)	840
AgsI	TTSAA	6 cut(s)	127, 304, 311, 479, 500, 1180
AjnI	CCWGG	8 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1903
Alw21I	GWGCWC	1 cut(s)	802
Alw26I	GTCTC	2 cut(s)	540, 1466
Ama87I	CYCGRG	1 cut(s)	632
AoxI	GGCC	9 cut(s)	163, 219, 264, 503, 718, 1204, 1627, 1716, 1901
ApeKI	GCWGC	4 cut(s)	182, 185, 1097, 1784
ApoI	RAATTY	5 cut(s)	97, 128, 494, 749, 783
ArsI	GACNNNNNNTTYG	2 cut(s)	1053, 1085
AspLEI	GCGC	5 cut(s)	243, 252, 289, 298, 912
AspS9I	GGNCC	5 cut(s)	363, 952, 1204, 1223, 1819
AsuC2I	CCSGG	1 cut(s)	1857
AsuHPI	GGTGA	9 cut(s)	30, 55, 365, 546, 823, 1201, 1672, 1744, 1808
AsuII	TTCGAA	1 cut(s)	1813
AvaI	CYCGRG	1 cut(s)	632
AvaII	GGWCC	4 cut(s)	363, 952, 1223, 1819
BalI	TGGCCA	1 cut(s)	1629
BamHI	GGATCC	2 cut(s)	484, 917
BauI	CACGAG	1 cut(s)	795
Bbv12I	GWGCWC	1 cut(s)	802
BbvCI	CCTCAGC	2 cut(s)	152, 438
BbvI	GCAGC	4 cut(s)	194, 197, 1109, 1796
BccI	CCATC	4 cut(s)	608, 710, 845, 907
BceAI	ACGGC	2 cut(s)	69, 218
BciT130I	CCWGG	8 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1905
BclI	TGATCA	1 cut(s)	1485
BcnI	CCSGG	1 cut(s)	1857
BcoDI	GTCTC	2 cut(s)	540, 1466
BfaI	CTAG	4 cut(s)	939, 974, 1416, 1689
BfmI	CTRYAG	2 cut(s)	671, 757
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	7 cut(s)	183, 186, 203, 206, 267, 1098, 1785
BlsI	GCNGC	7 cut(s)	184, 187, 204, 207, 268, 1099, 1786
Bme1390I	CCNGG	9 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1857, 1905
Bme18I	GGWCC	4 cut(s)	363, 952, 1223, 1819
BmeT110I	CYCGRG	1 cut(s)	632
BmgT120I	GGNCC	5 cut(s)	363, 952, 1204, 1223, 1819
BmiI	GGNNCC	4 cut(s)	486, 870, 919, 1820
BmrFI	CCNGG	9 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1857, 1905
BmrI	ACTGGG	1 cut(s)	331
BmsI	GCATC	5 cut(s)	1003, 1231, 1584, 1704, 1771
BmuI	ACTGGG	1 cut(s)	331
BpmI	CTGGAG	2 cut(s)	549, 1926
Bpu10I	CCTNAGC	2 cut(s)	152, 438
Bpu14I	TTCGAA	1 cut(s)	1813
BpuEI	CTTGAG	2 cut(s)	408, 474
BpuMI	CCSGG	1 cut(s)	1857
BsaBI	GATNNNNATC	2 cut(s)	855, 1431
BsaHI	GRCGYC	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	1466
BsaJI	CCNNGG	5 cut(s)	192, 359, 1101, 1134, 1283
BsaWI	WCCGGW	1 cut(s)	1542
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 1282, 1312
Bsc4I	CCNNNNNNNGG	9 cut(s)	262, 276, 545, 1319, 1585, 1606, 1705, 1890, 1891
Bse118I	RCCGGY	3 cut(s)	161, 705, 1899
Bse1I	ACTGG	2 cut(s)	326, 823
Bse3DI	GCAATG	3 cut(s)	774, 1060, 1404
Bse8I	GATNNNNATC	2 cut(s)	855, 1431
BseBI	CCWGG	8 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1905
BseDI	CCNNGG	5 cut(s)	192, 359, 1101, 1134, 1283
BseGI	GGATG	5 cut(s)	899, 1246, 1432, 1575, 1695
BseJI	GATNNNNATC	2 cut(s)	855, 1431
BseLI	CCNNNNNNNGG	9 cut(s)	262, 276, 545, 1319, 1585, 1606, 1705, 1890, 1891
BseMI	GCAATG	3 cut(s)	774, 1060, 1404
BseMII	CTCAG	4 cut(s)	166, 452, 459, 1742
BseNI	ACTGG	2 cut(s)	326, 823
BseRI	GAGGAG	5 cut(s)	881, 1303, 1601, 1691, 1721
BseXI	GCAGC	4 cut(s)	194, 197, 1109, 1796
BseYI	CCCAGC	3 cut(s)	1571, 1656, 1885
Bsh1236I	CGCG	5 cut(s)	241, 243, 287, 298, 379
BshFI	GGCC	9 cut(s)	165, 221, 266, 505, 720, 1206, 1629, 1718, 1903
BsiHKAI	GWGCWC	1 cut(s)	802
BsiHKCI	CYCGRG	1 cut(s)	632
BsiSI	CCGG	5 cut(s)	162, 706, 1543, 1856, 1900
BslFI	GGGAC	1 cut(s)	615
BslI	CCNNNNNNNGG	9 cut(s)	262, 276, 545, 1319, 1585, 1606, 1705, 1890, 1891
BsmAI	GTCTC	2 cut(s)	540, 1466
BsmBI	CGTCTC	1 cut(s)	540
BsmFI	GGGAC	1 cut(s)	615
BsmI	GAATGC	3 cut(s)	741, 1244, 1732
BsnI	GGCC	9 cut(s)	165, 221, 266, 505, 720, 1206, 1629, 1718, 1903
Bso31I	GGTCTC	1 cut(s)	1466
BsoBI	CYCGRG	1 cut(s)	632
Bsp119I	TTCGAA	1 cut(s)	1813
Bsp1286I	GDGCHC	1 cut(s)	802
Bsp19I	CCATGG	1 cut(s)	192
BspANI	GGCC	9 cut(s)	165, 221, 266, 505, 720, 1206, 1629, 1718, 1903
BspCNI	CTCAG	4 cut(s)	165, 451, 460, 1743
BspFNI	CGCG	5 cut(s)	241, 243, 287, 298, 379
BspHI	TCATGA	1 cut(s)	1931
BspLI	GGNNCC	4 cut(s)	486, 870, 919, 1820
BspMAI	CTGCAG	1 cut(s)	761
BspT104I	TTCGAA	1 cut(s)	1813
BspTNI	GGTCTC	1 cut(s)	1466
BsrBI	CCGCTC	1 cut(s)	1636
BsrDI	GCAATG	3 cut(s)	774, 1060, 1404
BsrFI	RCCGGY	3 cut(s)	161, 705, 1899
BsrI	ACTGG	2 cut(s)	326, 823
BssAI	RCCGGY	3 cut(s)	161, 705, 1899
BssECI	CCNNGG	5 cut(s)	192, 359, 1101, 1134, 1283
BssNI	GRCGYC	1 cut(s)	231
BssSI	CACGAG	1 cut(s)	795
BssT1I	CCWWGG	2 cut(s)	192, 1134
Bst2BI	CACGAG	1 cut(s)	795
Bst2UI	CCWGG	8 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1905
Bst4CI	ACNGT	3 cut(s)	275, 606, 1482
Bst6I	CTCTTC	1 cut(s)	28
BstACI	GRCGYC	1 cut(s)	231
BstAPI	GCANNNNNTGC	1 cut(s)	1394
BstBI	TTCGAA	1 cut(s)	1813
BstC8I	GCNNGC	6 cut(s)	145, 163, 393, 1876, 1880, 1916
BstDEI	CTNAG	4 cut(s)	152, 438, 468, 1751
BstDSI	CCRYGG	1 cut(s)	192
BstF5I	GGATG	5 cut(s)	899, 1246, 1432, 1575, 1695
BstFNI	CGCG	5 cut(s)	241, 243, 287, 298, 379
BstHHI	GCGC	5 cut(s)	243, 252, 289, 298, 912
BstMAI	GTCTC	2 cut(s)	540, 1466
BstNI	CCWGG	8 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1905
BstNSI	RCATGY	5 cut(s)	147, 395, 595, 844, 1918
BstSCI	CCNGG	9 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1855, 1903
BstSFI	CTRYAG	2 cut(s)	671, 757
BstUI	CGCG	5 cut(s)	241, 243, 287, 298, 379
BstV1I	GCAGC	4 cut(s)	194, 197, 1109, 1796
BstX2I	RGATCY	3 cut(s)	313, 484, 917
BstYI	RGATCY	3 cut(s)	313, 484, 917
BsuRI	GGCC	9 cut(s)	165, 221, 266, 505, 720, 1206, 1629, 1718, 1903
BtgI	CCRYGG	1 cut(s)	192
BtsCI	GGATG	5 cut(s)	899, 1246, 1432, 1575, 1695
BtsI	GCAGTG	1 cut(s)	766
BtsIMutI	CAGTG	2 cut(s)	766, 1182
Cac8I	GCNNGC	6 cut(s)	145, 163, 393, 1876, 1880, 1916
CciI	TCATGA	1 cut(s)	1931
CfoI	GCGC	5 cut(s)	243, 252, 289, 298, 912
Cfr10I	RCCGGY	3 cut(s)	161, 705, 1899
Cfr13I	GGNCC	5 cut(s)	363, 952, 1204, 1223, 1819
CseI	GACGC	3 cut(s)	239, 522, 1119
Csp6I	GTAC	3 cut(s)	969, 1047, 1125
CviQI	GTAC	3 cut(s)	969, 1047, 1125
DdeI	CTNAG	4 cut(s)	152, 438, 468, 1751
EaeI	YGGCCR	3 cut(s)	163, 264, 1627
Eam1104I	CTCTTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	28
EciI	GGCGGA	3 cut(s)	58, 71, 148
Eco130I	CCWWGG	2 cut(s)	192, 1134
Eco147I	AGGCCT	2 cut(s)	221, 1718
Eco31I	GGTCTC	1 cut(s)	1466
Eco47I	GGWCC	4 cut(s)	363, 952, 1223, 1819
Eco88I	CYCGRG	1 cut(s)	632
EcoO109I	RGGNCCY	2 cut(s)	952, 1819
EcoRI	GAATTC	2 cut(s)	749, 783
EcoRII	CCWGG	8 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1903
EcoT14I	CCWWGG	2 cut(s)	192, 1134
EcoT22I	ATGCAT	2 cut(s)	774, 1246
ErhI	CCWWGG	2 cut(s)	192, 1134
Esp3I	CGTCTC	1 cut(s)	540
FaqI	GGGAC	1 cut(s)	615
FauI	CCCGC	1 cut(s)	592
FbaI	TGATCA	1 cut(s)	1485
FblI	GTMKAC	1 cut(s)	228
Fnu4HI	GCNGC	7 cut(s)	183, 186, 203, 206, 267, 1098, 1785
FokI	GGATG	5 cut(s)	886, 1253, 1439, 1562, 1682
Fsp4HI	GCNGC	7 cut(s)	183, 186, 203, 206, 267, 1098, 1785
FspBI	CTAG	4 cut(s)	939, 974, 1416, 1689
FspI	TGCGCA	1 cut(s)	251
GlaI	GCGC	5 cut(s)	242, 251, 288, 297, 911
GluI	GCNGC	7 cut(s)	183, 186, 203, 206, 267, 1098, 1785
GsaI	CCCAGC	3 cut(s)	1575, 1660, 1889
GsuI	CTGGAG	2 cut(s)	549, 1926
HaeIII	GGCC	9 cut(s)	165, 221, 266, 505, 720, 1206, 1629, 1718, 1903
HapII	CCGG	5 cut(s)	162, 706, 1543, 1856, 1900
HgaI	GACGC	3 cut(s)	239, 522, 1119
HhaI	GCGC	5 cut(s)	243, 252, 289, 298, 912
Hin1I	GRCGYC	1 cut(s)	231
Hin6I	GCGC	5 cut(s)	241, 250, 287, 296, 910
HinP1I	GCGC	5 cut(s)	241, 250, 287, 296, 910
HincII	GTYRAC	2 cut(s)	229, 1516
HindII	GTYRAC	2 cut(s)	229, 1516
HindIII	AAGCTT	2 cut(s)	305, 1454
HinfI	GANTC	4 cut(s)	197, 458, 1419, 1665
HpaII	CCGG	5 cut(s)	162, 706, 1543, 1856, 1900
HphI	GGTGA	9 cut(s)	30, 55, 365, 546, 823, 1201, 1672, 1744, 1808
Hpy166II	GTNNAC	4 cut(s)	229, 1493, 1516, 1735
Hpy188I	TCNGA	5 cut(s)	318, 457, 658, 1266, 1752
Hpy188III	TCNNGA	5 cut(s)	491, 528, 746, 1238, 1932
Hpy8I	GTNNAC	4 cut(s)	229, 1493, 1516, 1735
Hpy99I	CGWCG	4 cut(s)	90, 230, 233, 275
HpyAV	CCTTC	8 cut(s)	51, 62, 133, 913, 1375, 1633, 1708, 1809
HpyCH4III	ACNGT	3 cut(s)	275, 606, 1482
HpyCH4IV	ACGT	3 cut(s)	371, 1082, 1123
HpyF3I	CTNAG	4 cut(s)	152, 438, 468, 1751
HpySE526I	ACGT	3 cut(s)	371, 1082, 1123
Hsp92I	GRCGYC	1 cut(s)	231
HspAI	GCGC	5 cut(s)	241, 250, 287, 296, 910
KroI	GCCGGC	1 cut(s)	161
KroNI	GCCGGC	1 cut(s)	163
Ksp22I	TGATCA	1 cut(s)	1485
LmnI	GCTCC	7 cut(s)	161, 193, 530, 868, 901, 1633, 1678
Lsp1109I	GCAGC	4 cut(s)	194, 197, 1109, 1796
LweI	GCATC	5 cut(s)	1003, 1231, 1584, 1704, 1771
MaeI	CTAG	4 cut(s)	939, 974, 1416, 1689
MaeII	ACGT	3 cut(s)	371, 1082, 1123
MaeIII	GTNAC	7 cut(s)	235, 409, 552, 811, 829, 836, 1256
MbiI	CCGCTC	1 cut(s)	1636
MboII	GAAGA	5 cut(s)	15, 36, 70, 323, 1271
MfeI	CAATTG	1 cut(s)	879
MflI	RGATCY	3 cut(s)	313, 484, 917
MhlI	GDGCHC	1 cut(s)	802
MlsI	TGGCCA	1 cut(s)	1629
MluCI	AATT	8 cut(s)	97, 128, 479, 494, 749, 783, 879, 1340
MluNI	TGGCCA	1 cut(s)	1629
MlyI	GAGTC	2 cut(s)	191, 467
MmeI	TCCRAC	2 cut(s)	526, 812
Mox20I	TGGCCA	1 cut(s)	1629
Mph1103I	ATGCAT	2 cut(s)	774, 1246
MroNI	GCCGGC	1 cut(s)	161
MscI	TGGCCA	1 cut(s)	1629
MseI	TTAA	6 cut(s)	645, 678, 1343, 1500, 1595, 1824
Msp20I	TGGCCA	1 cut(s)	1629
MspA1I	CMGCKG	2 cut(s)	1656, 1787
MspI	CCGG	5 cut(s)	162, 706, 1543, 1856, 1900
MspR9I	CCNGG	9 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1857, 1905
MunI	CAATTG	1 cut(s)	879
Mva1269I	GAATGC	3 cut(s)	741, 1244, 1732
MvaI	CCWGG	8 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1905
MvnI	CGCG	5 cut(s)	241, 243, 287, 298, 379
NaeI	GCCGGC	1 cut(s)	163
NciI	CCSGG	1 cut(s)	1857
NcoI	CCATGG	1 cut(s)	192
NgoMIV	GCCGGC	1 cut(s)	161
NlaIV	GGNNCC	4 cut(s)	486, 870, 919, 1820
NmeAIII	GCCGAG	2 cut(s)	315, 1390
NmuCI	GTSAC	5 cut(s)	235, 552, 811, 829, 836
NsbI	TGCGCA	1 cut(s)	251
NsiI	ATGCAT	2 cut(s)	774, 1246
NspI	RCATGY	5 cut(s)	147, 395, 595, 844, 1918
NspV	TTCGAA	1 cut(s)	1813
PaeI	GCATGC	3 cut(s)	147, 395, 1918
PagI	TCATGA	1 cut(s)	1931
PceI	AGGCCT	2 cut(s)	221, 1718
PciI	ACATGT	1 cut(s)	840
PctI	GAATGC	3 cut(s)	741, 1244, 1732
PdiI	GCCGGC	1 cut(s)	163
PfeI	GAWTC	2 cut(s)	1419, 1665
PflFI	GACNNNGTC	1 cut(s)	233
PflMI	CCANNNNNTGG	1 cut(s)	262
PkrI	GCNGC	7 cut(s)	184, 187, 204, 207, 268, 1099, 1786
PleI	GAGTC	2 cut(s)	191, 466
PpsI	GAGTC	2 cut(s)	191, 466
PpuMI	RGGWCCY	2 cut(s)	952, 1819
PscI	ACATGT	1 cut(s)	840
Psp5II	RGGWCCY	2 cut(s)	952, 1819
Psp6I	CCWGG	8 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1903
PspFI	CCCAGC	3 cut(s)	1571, 1656, 1885
PspGI	CCWGG	8 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1903
PspN4I	GGNNCC	4 cut(s)	486, 870, 919, 1820
PspPI	GGNCC	5 cut(s)	363, 952, 1204, 1223, 1819
PspPPI	RGGWCCY	2 cut(s)	952, 1819
PstI	CTGCAG	1 cut(s)	761
PsuI	RGATCY	3 cut(s)	313, 484, 917
PsyI	GACNNNGTC	1 cut(s)	233
PvuII	CAGCTG	2 cut(s)	1656, 1787
RsaI	GTAC	3 cut(s)	970, 1048, 1126
RsaNI	GTAC	3 cut(s)	969, 1047, 1125
SalI	GTCGAC	1 cut(s)	227
SaqAI	TTAA	6 cut(s)	645, 678, 1343, 1500, 1595, 1824
SatI	GCNGC	7 cut(s)	183, 186, 203, 206, 267, 1098, 1785
Sau96I	GGNCC	5 cut(s)	363, 952, 1204, 1223, 1819
SchI	GAGTC	2 cut(s)	191, 467
ScrFI	CCNGG	9 cut(s)	351, 361, 451, 873, 1102, 1284, 1631, 1857, 1905
SduI	GDGCHC	1 cut(s)	802
SfaNI	GCATC	5 cut(s)	1003, 1231, 1584, 1704, 1771
SfcI	CTRYAG	2 cut(s)	671, 757
SfuI	TTCGAA	1 cut(s)	1813
SgrDI	CGTCGACG	1 cut(s)	227
SinI	GGWCC	4 cut(s)	363, 952, 1223, 1819
SmlI	CTYRAG	2 cut(s)	423, 489
SmoI	CTYRAG	2 cut(s)	423, 489
SphI	GCATGC	3 cut(s)	147, 395, 1918
Sse9I	AATT	8 cut(s)	97, 128, 479, 494, 749, 783, 879, 1340
SseBI	AGGCCT	2 cut(s)	221, 1718
SspI	AATATT	1 cut(s)	1333
SspMI	CTAG	4 cut(s)	939, 974, 1416, 1689
StuI	AGGCCT	2 cut(s)	221, 1718
StyD4I	CCNGG	9 cut(s)	349, 359, 449, 871, 1100, 1282, 1629, 1855, 1903
StyI	CCWWGG	2 cut(s)	192, 1134
TaaI	ACNGT	3 cut(s)	275, 606, 1482
TaiI	ACGT	3 cut(s)	374, 1085, 1126
TaqI	TCGA	4 cut(s)	228, 619, 1248, 1813
TaqII	GACCGA	1 cut(s)	380
TasI	AATT	8 cut(s)	97, 128, 479, 494, 749, 783, 879, 1340
TatI	WGTACW	1 cut(s)	1046
TauI	GCSGC	3 cut(s)	205, 208, 269
TfiI	GAWTC	2 cut(s)	1419, 1665
Tru1I	TTAA	6 cut(s)	645, 678, 1343, 1500, 1595, 1824
Tru9I	TTAA	6 cut(s)	645, 678, 1343, 1500, 1595, 1824
TscAI	CASTG	2 cut(s)	766, 1189
TseFI	GTSAC	5 cut(s)	235, 552, 811, 829, 836
TseI	GCWGC	4 cut(s)	182, 185, 1097, 1784
Tsp45I	GTSAC	5 cut(s)	235, 552, 811, 829, 836
TspDTI	ATGAA	2 cut(s)	1411, 1739
TspGWI	ACGGA	1 cut(s)	214
TspRI	CASTG	2 cut(s)	766, 1189
Tth111I	GACNNNGTC	1 cut(s)	233
Van91I	CCANNNNNTGG	1 cut(s)	262
VpaK11BI	GGWCC	4 cut(s)	363, 952, 1223, 1819
XapI	RAATTY	5 cut(s)	97, 128, 494, 749, 783
XceI	RCATGY	5 cut(s)	147, 395, 595, 844, 1918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1316
XmiI	GTMKAC	1 cut(s)	228
XspI	CTAG	4 cut(s)	939, 974, 1416, 1689
Zsp2I	ATGCAT	2 cut(s)	774, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.