U6 snRNA-associated Sm-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21190 AT1G76860 |
| fragaria_vesca | FvH4_2g13861 |
| malus_domestica | MD05G1024000.v1.1 MD10G1024500.v1.1 |
| prunus_persica | Prupe.3G148200_v2.0.a1 Prupe.8G028400_v2.0.a1 |
| pyrus_communis | pycom10g01630 |
| rosa_chinensis | RchiOBHm_Chr6g0275571 |
| rosa_multiflora | Rmu_ssc0000162.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00193180 |
| rosa_rugosa | Rorug06G0094100 |
| rosa_samantha | Rh6AG206500 Rh6BG209500 Rh6CG211800 Rh6DG202100 |
| rosa_wichuraiana | Rw6G017930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1422 |
| Acc16I | TGCGCA | 1 cut(s) | 744 |
| AccI | GTMKAC | 2 cut(s) | 1135, 1822 |
| AccII | CGCG | 1 cut(s) | 489 |
| AciI | CCGC | 1 cut(s) | 489 |
| AclWI | GGATC | 8 cut(s) | 12, 298, 356, 369, 1251, 1320, 1430, 1574 |
| AcoI | YGGCCR | 1 cut(s) | 1548 |
| AcsI | RAATTY | 3 cut(s) | 109, 786, 1302 |
| AcuI | CTGAAG | 2 cut(s) | 1093, 1587 |
| AfaI | GTAC | 6 cut(s) | 30, 342, 555, 596, 621, 1176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 279 |
| AflIII | ACRYGT | 1 cut(s) | 1812 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1340, 1372 |
| Alw21I | GWGCWC | 1 cut(s) | 1707 |
| Alw26I | GTCTC | 2 cut(s) | 182, 972 |
| AlwI | GGATC | 8 cut(s) | 12, 298, 356, 369, 1251, 1320, 1430, 1574 |
| AoxI | GGCC | 2 cut(s) | 1548, 1913 |
| ApeKI | GCWGC | 2 cut(s) | 328, 461 |
| ApoI | RAATTY | 3 cut(s) | 109, 786, 1302 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 610, 1121, 1383 |
| AspLEI | GCGC | 2 cut(s) | 489, 745 |
| AspS9I | GGNCC | 1 cut(s) | 955 |
| AsuC2I | CCSGG | 1 cut(s) | 801 |
| AsuHPI | GGTGA | 6 cut(s) | 4, 457, 877, 1453, 1535, 1570 |
| AvaII | GGWCC | 1 cut(s) | 955 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 324, 357 |
| BalI | TGGCCA | 1 cut(s) | 1550 |
| BamHI | GGATCC | 2 cut(s) | 4, 361 |
| BanII | GRGCYC | 1 cut(s) | 1707 |
| BauI | CACGAG | 2 cut(s) | 615, 1205 |
| Bbv12I | GWGCWC | 1 cut(s) | 1707 |
| BbvI | GCAGC | 2 cut(s) | 340, 473 |
| BccI | CCATC | 4 cut(s) | 28, 447, 749, 1703 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BclI | TGATCA | 1 cut(s) | 1615 |
| BcnI | CCSGG | 1 cut(s) | 801 |
| BcoDI | GTCTC | 2 cut(s) | 182, 972 |
| BfaI | CTAG | 4 cut(s) | 809, 1389, 1430, 1592 |
| BfmI | CTRYAG | 3 cut(s) | 313, 1540, 1988 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BglII | AGATCT | 1 cut(s) | 1405 |
| BisI | GCNGC | 2 cut(s) | 329, 462 |
| BlsI | GCNGC | 2 cut(s) | 330, 463 |
| BmcAI | AGTACT | 1 cut(s) | 30 |
| Bme1390I | CCNGG | 1 cut(s) | 801 |
| Bme18I | GGWCC | 1 cut(s) | 955 |
| BmgT120I | GGNCC | 1 cut(s) | 955 |
| BmiI | GGNNCC | 3 cut(s) | 6, 363, 1961 |
| BmrFI | CCNGG | 1 cut(s) | 801 |
| BmrI | ACTGGG | 1 cut(s) | 1760 |
| BmsI | GCATC | 4 cut(s) | 278, 1488, 1842, 1881 |
| BmuI | ACTGGG | 1 cut(s) | 1760 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 448, 480, 450, 482 |
| BpmI | CTGGAG | 1 cut(s) | 996 |
| BpuEI | CTTGAG | 1 cut(s) | 1170 |
| BpuMI | CCSGG | 1 cut(s) | 801 |
| BsaBI | GATNNNNATC | 2 cut(s) | 242, 945 |
| BsaJI | CCNNGG | 1 cut(s) | 1662 |
| BsaWI | WCCGGW | 1 cut(s) | 1438 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 795, 825 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 279 |
| Bse1I | ACTGG | 5 cut(s) | 957, 958, 1164, 1755, 1782 |
| Bse3DI | GCAATG | 1 cut(s) | 1329 |
| Bse8I | GATNNNNATC | 2 cut(s) | 242, 945 |
| BseDI | CCNNGG | 1 cut(s) | 1662 |
| BseGI | GGATG | 5 cut(s) | 172, 269, 295, 1503, 1872 |
| BseJI | GATNNNNATC | 2 cut(s) | 242, 945 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 279 |
| BseMI | GCAATG | 1 cut(s) | 1329 |
| BseMII | CTCAG | 4 cut(s) | 381, 516, 828, 1423 |
| BseNI | ACTGG | 5 cut(s) | 957, 958, 1164, 1755, 1782 |
| BseRI | GAGGAG | 1 cut(s) | 204 |
| BseXI | GCAGC | 2 cut(s) | 340, 473 |
| Bsh1236I | CGCG | 1 cut(s) | 489 |
| BshFI | GGCC | 2 cut(s) | 1550, 1915 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1707 |
| BsiSI | CCGG | 2 cut(s) | 800, 1439 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 279 |
| BsmAI | GTCTC | 2 cut(s) | 182, 972 |
| BsmBI | CGTCTC | 1 cut(s) | 182 |
| BsmI | GAATGC | 1 cut(s) | 1123 |
| BsnI | GGCC | 2 cut(s) | 1550, 1915 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1707 |
| Bsp19I | CCATGG | 1 cut(s) | 1662 |
| BspACI | CCGC | 1 cut(s) | 489 |
| BspANI | GGCC | 2 cut(s) | 1550, 1915 |
| BspCNI | CTCAG | 4 cut(s) | 380, 515, 829, 1422 |
| BspFNI | CGCG | 1 cut(s) | 489 |
| BspHI | TCATGA | 1 cut(s) | 415 |
| BspLI | GGNNCC | 3 cut(s) | 6, 363, 1961 |
| BspPI | GGATC | 8 cut(s) | 12, 298, 356, 369, 1251, 1320, 1430, 1574 |
| BspQI | GCTCTTC | 2 cut(s) | 1112, 1521 |
| BsrDI | GCAATG | 1 cut(s) | 1329 |
| BsrI | ACTGG | 5 cut(s) | 957, 958, 1164, 1755, 1782 |
| BssECI | CCNNGG | 1 cut(s) | 1662 |
| BssSI | CACGAG | 2 cut(s) | 615, 1205 |
| BssT1I | CCWWGG | 1 cut(s) | 1662 |
| Bst2BI | CACGAG | 2 cut(s) | 615, 1205 |
| Bst4CI | ACNGT | 5 cut(s) | 337, 715, 1258, 1354, 1858 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 222, 1112, 1521 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 427 |
| BstDEI | CTNAG | 5 cut(s) | 367, 502, 837, 1293, 1409 |
| BstDSI | CCRYGG | 1 cut(s) | 1662 |
| BstF5I | GGATG | 5 cut(s) | 172, 269, 295, 1503, 1872 |
| BstFNI | CGCG | 1 cut(s) | 489 |
| BstHHI | GCGC | 2 cut(s) | 489, 745 |
| BstMAI | GTCTC | 2 cut(s) | 182, 972 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 427, 493, 1169, 1679 |
| BstNSI | RCATGY | 1 cut(s) | 1816 |
| BstSCI | CCNGG | 1 cut(s) | 799 |
| BstSFI | CTRYAG | 3 cut(s) | 313, 1540, 1988 |
| BstUI | CGCG | 1 cut(s) | 489 |
| BstV1I | GCAGC | 2 cut(s) | 340, 473 |
| BstX2I | RGATCY | 7 cut(s) | 4, 303, 361, 1312, 1405, 1435, 1566 |
| BstYI | RGATCY | 7 cut(s) | 4, 303, 361, 1312, 1405, 1435, 1566 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 2 cut(s) | 1550, 1915 |
| BtgI | CCRYGG | 1 cut(s) | 1662 |
| BtsCI | GGATG | 5 cut(s) | 172, 269, 295, 1503, 1872 |
| BtsIMutI | CAGTG | 1 cut(s) | 1272 |
| CciI | TCATGA | 1 cut(s) | 415 |
| CfoI | GCGC | 2 cut(s) | 489, 745 |
| Cfr13I | GGNCC | 1 cut(s) | 955 |
| Csp6I | GTAC | 6 cut(s) | 29, 341, 554, 595, 620, 1175 |
| CviAII | CATG | 9 cut(s) | 60, 279, 416, 673, 1502, 1507, 1663, 1813, 1972 |
| CviQI | GTAC | 6 cut(s) | 29, 341, 554, 595, 620, 1175 |
| DdeI | CTNAG | 5 cut(s) | 367, 502, 837, 1293, 1409 |
| DraI | TTTAAA | 1 cut(s) | 1473 |
| EaeI | YGGCCR | 1 cut(s) | 1548 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 222, 1112, 1521 |
| EarI | CTCTTC | 4 cut(s) | 40, 222, 1112, 1521 |
| Ecl136II | GAGCTC | 1 cut(s) | 1705 |
| Eco130I | CCWWGG | 1 cut(s) | 1662 |
| Eco24I | GRGCYC | 1 cut(s) | 1707 |
| Eco47I | GGWCC | 1 cut(s) | 955 |
| Eco53kI | GAGCTC | 1 cut(s) | 1705 |
| Eco57I | CTGAAG | 2 cut(s) | 1093, 1587 |
| EcoICRI | GAGCTC | 1 cut(s) | 1705 |
| EcoT14I | CCWWGG | 1 cut(s) | 1662 |
| EcoT22I | ATGCAT | 2 cut(s) | 271, 1503 |
| EcoT38I | GRGCYC | 1 cut(s) | 1707 |
| ErhI | CCWWGG | 1 cut(s) | 1662 |
| Esp3I | CGTCTC | 1 cut(s) | 182 |
| FaeI | CATG | 9 cut(s) | 63, 282, 419, 676, 1505, 1510, 1666, 1816, 1975 |
| FatI | CATG | 9 cut(s) | 59, 278, 415, 672, 1501, 1506, 1662, 1812, 1971 |
| FauI | CCCGC | 1 cut(s) | 482 |
| FauNDI | CATATG | 1 cut(s) | 67 |
| FbaI | TGATCA | 1 cut(s) | 1615 |
| FblI | GTMKAC | 2 cut(s) | 1135, 1822 |
| Fnu4HI | GCNGC | 2 cut(s) | 329, 462 |
| FokI | GGATG | 5 cut(s) | 179, 256, 302, 1510, 1859 |
| FriOI | GRGCYC | 1 cut(s) | 1707 |
| Fsp4HI | GCNGC | 2 cut(s) | 329, 462 |
| FspBI | CTAG | 4 cut(s) | 809, 1389, 1430, 1592 |
| FspI | TGCGCA | 1 cut(s) | 744 |
| GlaI | GCGC | 2 cut(s) | 488, 744 |
| GluI | GCNGC | 2 cut(s) | 329, 462 |
| GsuI | CTGGAG | 1 cut(s) | 996 |
| HaeIII | GGCC | 2 cut(s) | 1550, 1915 |
| HapII | CCGG | 2 cut(s) | 800, 1439 |
| HhaI | GCGC | 2 cut(s) | 489, 745 |
| Hin1II | CATG | 9 cut(s) | 63, 282, 419, 676, 1505, 1510, 1666, 1816, 1975 |
| Hin6I | GCGC | 2 cut(s) | 487, 743 |
| HinP1I | GCGC | 2 cut(s) | 487, 743 |
| HincII | GTYRAC | 2 cut(s) | 877, 1057 |
| HindII | GTYRAC | 2 cut(s) | 877, 1057 |
| HindIII | AAGCTT | 1 cut(s) | 1095 |
| HpaII | CCGG | 2 cut(s) | 800, 1439 |
| HphI | GGTGA | 6 cut(s) | 4, 457, 877, 1453, 1535, 1570 |
| Hpy166II | GTNNAC | 7 cut(s) | 620, 877, 1057, 1136, 1220, 1235, 1823 |
| Hpy188I | TCNGA | 8 cut(s) | 370, 505, 838, 985, 995, 1147, 1317, 1412 |
| Hpy188III | TCNNGA | 7 cut(s) | 24, 301, 416, 935, 1023, 1592, 1808 |
| Hpy8I | GTNNAC | 7 cut(s) | 620, 877, 1057, 1136, 1220, 1235, 1823 |
| HpyAV | CCTTC | 5 cut(s) | 317, 436, 897, 1132, 1886 |
| HpyCH4III | ACNGT | 5 cut(s) | 337, 715, 1258, 1354, 1858 |
| HpyCH4IV | ACGT | 2 cut(s) | 175, 1777 |
| HpyCH4V | TGCA | 8 cut(s) | 269, 430, 1334, 1427, 1459, 1501, 1652, 1872 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 427, 493, 1169, 1679 |
| HpyF3I | CTNAG | 5 cut(s) | 367, 502, 837, 1293, 1409 |
| HpySE526I | ACGT | 2 cut(s) | 175, 1777 |
| Hsp92II | CATG | 9 cut(s) | 63, 282, 419, 676, 1505, 1510, 1666, 1816, 1975 |
| HspAI | GCGC | 2 cut(s) | 487, 743 |
| Ksp22I | TGATCA | 1 cut(s) | 1615 |
| LguI | GCTCTTC | 2 cut(s) | 1112, 1521 |
| LmnI | GCTCC | 1 cut(s) | 1702 |
| Lsp1109I | GCAGC | 2 cut(s) | 340, 473 |
| LweI | GCATC | 4 cut(s) | 278, 1488, 1842, 1881 |
| MaeI | CTAG | 4 cut(s) | 809, 1389, 1430, 1592 |
| MaeII | ACGT | 2 cut(s) | 175, 1777 |
| MaeIII | GTNAC | 3 cut(s) | 865, 1784, 1950 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MflI | RGATCY | 7 cut(s) | 4, 303, 361, 1312, 1405, 1435, 1566 |
| MhlI | GDGCHC | 1 cut(s) | 1707 |
| MlsI | TGGCCA | 1 cut(s) | 1550 |
| MluNI | TGGCCA | 1 cut(s) | 1550 |
| MlyI | GAGTC | 4 cut(s) | 239, 329, 402, 974 |
| MmeI | TCCRAC | 4 cut(s) | 760, 838, 1094, 1251 |
| Mox20I | TGGCCA | 1 cut(s) | 1550 |
| Mph1103I | ATGCAT | 2 cut(s) | 271, 1503 |
| MroXI | GAANNNNTTC | 3 cut(s) | 610, 1121, 1383 |
| MscI | TGGCCA | 1 cut(s) | 1550 |
| MseI | TTAA | 5 cut(s) | 929, 945, 962, 1082, 1472 |
| MslI | CAYNNNNRTG | 2 cut(s) | 264, 435 |
| Msp20I | TGGCCA | 1 cut(s) | 1550 |
| MspI | CCGG | 2 cut(s) | 800, 1439 |
| MspR9I | CCNGG | 1 cut(s) | 801 |
| MunI | CAATTG | 1 cut(s) | 600 |
| Mva1269I | GAATGC | 1 cut(s) | 1123 |
| MvnI | CGCG | 1 cut(s) | 489 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 427, 493, 1169, 1679 |
| NciI | CCSGG | 1 cut(s) | 801 |
| NcoI | CCATGG | 1 cut(s) | 1662 |
| NdeI | CATATG | 1 cut(s) | 67 |
| NlaIII | CATG | 9 cut(s) | 63, 282, 419, 676, 1505, 1510, 1666, 1816, 1975 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 363, 1961 |
| NmuCI | GTSAC | 1 cut(s) | 865 |
| NsbI | TGCGCA | 1 cut(s) | 744 |
| NsiI | ATGCAT | 2 cut(s) | 271, 1503 |
| NspI | RCATGY | 1 cut(s) | 1816 |
| PagI | TCATGA | 1 cut(s) | 415 |
| PciI | ACATGT | 1 cut(s) | 1812 |
| PciSI | GCTCTTC | 2 cut(s) | 1112, 1521 |
| PctI | GAATGC | 1 cut(s) | 1123 |
| PdmI | GAANNNNTTC | 3 cut(s) | 610, 1121, 1383 |
| PfeI | GAWTC | 7 cut(s) | 150, 448, 515, 611, 841, 885, 1891 |
| PkrI | GCNGC | 2 cut(s) | 330, 463 |
| PleI | GAGTC | 4 cut(s) | 238, 328, 401, 974 |
| PpsI | GAGTC | 4 cut(s) | 238, 328, 401, 974 |
| PscI | ACATGT | 1 cut(s) | 1812 |
| PsiI | TTATAA | 1 cut(s) | 1422 |
| Psp124BI | GAGCTC | 1 cut(s) | 1707 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 363, 1961 |
| PspPI | GGNCC | 1 cut(s) | 955 |
| PsuI | RGATCY | 7 cut(s) | 4, 303, 361, 1312, 1405, 1435, 1566 |
| RsaI | GTAC | 6 cut(s) | 30, 342, 555, 596, 621, 1176 |
| RsaNI | GTAC | 6 cut(s) | 29, 341, 554, 595, 620, 1175 |
| RseI | CAYNNNNRTG | 2 cut(s) | 264, 435 |
| SacI | GAGCTC | 1 cut(s) | 1707 |
| SapI | GCTCTTC | 2 cut(s) | 1112, 1521 |
| SaqAI | TTAA | 5 cut(s) | 929, 945, 962, 1082, 1472 |
| SatI | GCNGC | 2 cut(s) | 329, 462 |
| Sau96I | GGNCC | 1 cut(s) | 955 |
| ScaI | AGTACT | 1 cut(s) | 30 |
| SchI | GAGTC | 4 cut(s) | 239, 329, 402, 974 |
| ScrFI | CCNGG | 1 cut(s) | 801 |
| SduI | GDGCHC | 1 cut(s) | 1707 |
| SfaNI | GCATC | 4 cut(s) | 278, 1488, 1842, 1881 |
| SfcI | CTRYAG | 3 cut(s) | 313, 1540, 1988 |
| SinI | GGWCC | 1 cut(s) | 955 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 264, 435 |
| SmlI | CTYRAG | 1 cut(s) | 1185 |
| SmoI | CTYRAG | 1 cut(s) | 1185 |
| SsiI | CCGC | 1 cut(s) | 489 |
| SspI | AATATT | 1 cut(s) | 1477 |
| SspMI | CTAG | 4 cut(s) | 809, 1389, 1430, 1592 |
| SstI | GAGCTC | 1 cut(s) | 1707 |
| StyD4I | CCNGG | 1 cut(s) | 799 |
| StyI | CCWWGG | 1 cut(s) | 1662 |
| TaaI | ACNGT | 5 cut(s) | 337, 715, 1258, 1354, 1858 |
| TaiI | ACGT | 2 cut(s) | 178, 1780 |
| TaqI | TCGA | 2 cut(s) | 451, 540 |
| TatI | WGTACW | 3 cut(s) | 28, 553, 1174 |
| TfiI | GAWTC | 7 cut(s) | 150, 448, 515, 611, 841, 885, 1891 |
| Tru1I | TTAA | 5 cut(s) | 929, 945, 962, 1082, 1472 |
| Tru9I | TTAA | 5 cut(s) | 929, 945, 962, 1082, 1472 |
| TscAI | CASTG | 1 cut(s) | 1272 |
| TseFI | GTSAC | 1 cut(s) | 865 |
| TseI | GCWGC | 2 cut(s) | 328, 461 |
| Tsp45I | GTSAC | 1 cut(s) | 865 |
| TspRI | CASTG | 1 cut(s) | 1272 |
| VpaK11BI | GGWCC | 1 cut(s) | 955 |
| XapI | RAATTY | 3 cut(s) | 109, 786, 1302 |
| XbaI | TCTAGA | 1 cut(s) | 1591 |
| XceI | RCATGY | 1 cut(s) | 1816 |
| XmiI | GTMKAC | 2 cut(s) | 1135, 1822 |
| XmnI | GAANNNNTTC | 3 cut(s) | 610, 1121, 1383 |
| XspI | CTAG | 4 cut(s) | 809, 1389, 1430, 1592 |
| ZrmI | AGTACT | 1 cut(s) | 30 |
| Zsp2I | ATGCAT | 2 cut(s) | 271, 1503 |