DNA-directed RNA polymerase III subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT3G28956 AT5G62950 AT5G62950 AT5G62950 AT5G62950 AT5G62950 AT5G62950 AT5G62950 |
| fragaria_vesca | FvH4_4g01070 FvH4_4g01070 FvH4_5g27570 |
| malus_domestica | MD13G1198900.v1.1 |
| prunus_persica | Prupe.1G020700_v2.0.a1 Prupe.1G020700_v2.0.a1 Prupe.1G020700_v2.0.a1 Prupe.1G020700_v2.0.a1 |
| pyrus_communis | pycom13g17270 |
| rosa_chinensis | RchiOBHm_Chr4g0387641 RchiOBHm_Chr6g0280701 |
| rosa_laevigata | RLG00000010104 RLG00000013035 |
| rosa_multiflora | Rmu_sc0000976.1_g000021 Rmu_sc0003953.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00187720 |
| rosa_rugosa | Rorug03G0311800 Rorug03G0311900 Rorug03G0312000 Rorug03G0312100 Rorug06G0133900 Rorug06G0133900 Rorug06G0133900 Rorug06G0134000 |
| rosa_samantha | Rh4AG017400 Rh4BG012200 Rh4CG018600 Rh4DG013200 Rh6AG246600 Rh6BG248900 Rh6CG250000 Rh6DG241500 |
| rosa_wichuraiana | Rw4G001120 Rw6G021350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 253 |
| Acc36I | ACCTGC | 2 cut(s) | 74, 253 |
| AccI | GTMKAC | 1 cut(s) | 88 |
| AclWI | GGATC | 1 cut(s) | 230 |
| AgsI | TTSAA | 1 cut(s) | 268 |
| AluBI | AGCT | 2 cut(s) | 179, 271 |
| AluI | AGCT | 2 cut(s) | 179, 271 |
| AlwI | GGATC | 1 cut(s) | 230 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 245 |
| AoxI | GGCC | 1 cut(s) | 158 |
| ApeKI | GCWGC | 2 cut(s) | 53, 80 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 198 |
| BbvI | GCAGC | 2 cut(s) | 65, 92 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BfuAI | ACCTGC | 2 cut(s) | 74, 253 |
| BisI | GCNGC | 2 cut(s) | 54, 81 |
| BlsI | GCNGC | 2 cut(s) | 55, 82 |
| BmsI | GCATC | 1 cut(s) | 65 |
| BpmI | CTGGAG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseMII | CTCAG | 1 cut(s) | 217 |
| BseXI | GCAGC | 2 cut(s) | 65, 92 |
| BshFI | GGCC | 1 cut(s) | 160 |
| BsnI | GGCC | 1 cut(s) | 160 |
| Bsp143I | GATC | 1 cut(s) | 235 |
| BspANI | GGCC | 1 cut(s) | 160 |
| BspCNI | CTCAG | 1 cut(s) | 216 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BspMI | ACCTGC | 2 cut(s) | 74, 253 |
| BspPI | GGATC | 1 cut(s) | 230 |
| BssMI | GATC | 1 cut(s) | 235 |
| BstDEI | CTNAG | 1 cut(s) | 203 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstKTI | GATC | 1 cut(s) | 238 |
| BstMBI | GATC | 1 cut(s) | 235 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 2 cut(s) | 65, 92 |
| BsuRI | GGCC | 1 cut(s) | 160 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| BtsI | GCAGTG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| BveI | ACCTGC | 2 cut(s) | 74, 253 |
| CaiI | CAGNNNCTG | 1 cut(s) | 245 |
| CviAII | CATG | 2 cut(s) | 10, 191 |
| CviJI | RGCY | 8 cut(s) | 116, 160, 168, 179, 199, 209, 259, 271 |
| CviKI_1 | RGCY | 8 cut(s) | 116, 160, 168, 179, 199, 209, 259, 271 |
| DdeI | CTNAG | 1 cut(s) | 203 |
| DpnI | GATC | 1 cut(s) | 237 |
| DpnII | GATC | 1 cut(s) | 235 |
| FaeI | CATG | 2 cut(s) | 13, 194 |
| FaiI | YATR | 3 cut(s) | 11, 192, 225 |
| FatI | CATG | 2 cut(s) | 9, 190 |
| FblI | GTMKAC | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 2 cut(s) | 54, 81 |
| FokI | GGATG | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 2 cut(s) | 54, 81 |
| GluI | GCNGC | 2 cut(s) | 54, 81 |
| GsuI | CTGGAG | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 160 |
| Hin1II | CATG | 2 cut(s) | 13, 194 |
| HindIII | AAGCTT | 1 cut(s) | 177 |
| HinfI | GANTC | 1 cut(s) | 186 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 89 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 43, 140, 183 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 89 |
| HpyCH4V | TGCA | 2 cut(s) | 53, 80 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 203 |
| Hsp92II | CATG | 2 cut(s) | 13, 194 |
| Kzo9I | GATC | 1 cut(s) | 235 |
| LpnPI | CCDG | 7 cut(s) | 56, 69, 153, 190, 196, 252, 258 |
| Lsp1109I | GCAGC | 2 cut(s) | 65, 92 |
| LweI | GCATC | 1 cut(s) | 65 |
| MalI | GATC | 1 cut(s) | 237 |
| MboI | GATC | 1 cut(s) | 235 |
| MnlI | CCTC | 4 cut(s) | 82, 136, 150, 270 |
| MroXI | GAANNNNTTC | 1 cut(s) | 198 |
| MseI | TTAA | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 1 cut(s) | 235 |
| NlaIII | CATG | 2 cut(s) | 13, 194 |
| PaqCI | CACCTGC | 1 cut(s) | 253 |
| PdmI | GAANNNNTTC | 1 cut(s) | 198 |
| PfeI | GAWTC | 1 cut(s) | 186 |
| PkrI | GCNGC | 2 cut(s) | 55, 82 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| PstNI | CAGNNNCTG | 1 cut(s) | 245 |
| SaqAI | TTAA | 1 cut(s) | 255 |
| SatI | GCNGC | 2 cut(s) | 54, 81 |
| Sau3AI | GATC | 1 cut(s) | 235 |
| SetI | ASST | 5 cut(s) | 74, 88, 181, 247, 273 |
| SfaNI | GCATC | 1 cut(s) | 65 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SmlI | CTYRAG | 1 cut(s) | 17 |
| SmoI | CTYRAG | 1 cut(s) | 17 |
| TfiI | GAWTC | 1 cut(s) | 186 |
| Tru1I | TTAA | 1 cut(s) | 255 |
| Tru9I | TTAA | 1 cut(s) | 255 |
| TscAI | CASTG | 1 cut(s) | 132 |
| TseI | GCWGC | 2 cut(s) | 53, 80 |
| TspDTI | ATGAA | 2 cut(s) | 147, 207 |
| TspRI | CASTG | 1 cut(s) | 132 |
| XmiI | GTMKAC | 1 cut(s) | 88 |
| XmnI | GAANNNNTTC | 1 cut(s) | 198 |