ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g16840 |
| rosa_chinensis | RchiOBHm_Chr6g0280971 |
| rosa_laevigata | RLG00000013011 |
| rosa_multiflora | Rmu_co8316755.1_g000001 Rmu_sc0030247.1_g000001 Rmu_sc0030424.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00187440 |
| rosa_rugosa | Rorug06G0137700 |
| rosa_samantha | Rh6AG249700 Rh6BG251900 Rh6CG252400 Rh6DG244200 |
| rosa_wichuraiana | Rw6G021610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 44 |
| AclWI | GGATC | 1 cut(s) | 19 |
| AjnI | CCWGG | 1 cut(s) | 139 |
| AluBI | AGCT | 2 cut(s) | 134, 189 |
| AluI | AGCT | 2 cut(s) | 134, 189 |
| AlwI | GGATC | 1 cut(s) | 19 |
| AoxI | GGCC | 1 cut(s) | 29 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| AspS9I | GGNCC | 1 cut(s) | 29 |
| AsuC2I | CCSGG | 1 cut(s) | 33 |
| AsuHPI | GGTGA | 2 cut(s) | 160, 171 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BciT130I | CCWGG | 1 cut(s) | 141 |
| BcnI | CCSGG | 1 cut(s) | 33 |
| BfaI | CTAG | 1 cut(s) | 150 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 2 cut(s) | 33, 141 |
| BmgT120I | GGNCC | 1 cut(s) | 29 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 2 cut(s) | 33, 141 |
| BpmI | CTGGAG | 2 cut(s) | 51, 59 |
| BpuMI | CCSGG | 1 cut(s) | 33 |
| Bse1I | ACTGG | 2 cut(s) | 42, 68 |
| BseBI | CCWGG | 1 cut(s) | 141 |
| BseNI | ACTGG | 2 cut(s) | 42, 68 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| BshFI | GGCC | 1 cut(s) | 31 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| BslFI | GGGAC | 1 cut(s) | 48 |
| BsmFI | GGGAC | 1 cut(s) | 48 |
| BsnI | GGCC | 1 cut(s) | 31 |
| Bsp143I | GATC | 2 cut(s) | 11, 16 |
| BspANI | GGCC | 1 cut(s) | 31 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspPI | GGATC | 1 cut(s) | 19 |
| BsrI | ACTGG | 2 cut(s) | 42, 68 |
| BssMI | GATC | 2 cut(s) | 11, 16 |
| BssNAI | GTATAC | 1 cut(s) | 45 |
| Bst1107I | GTATAC | 1 cut(s) | 45 |
| Bst2UI | CCWGG | 1 cut(s) | 141 |
| BstKTI | GATC | 2 cut(s) | 14, 19 |
| BstMBI | GATC | 2 cut(s) | 11, 16 |
| BstNI | CCWGG | 1 cut(s) | 141 |
| BstSCI | CCNGG | 2 cut(s) | 31, 139 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BstX2I | RGATCY | 1 cut(s) | 11 |
| BstYI | RGATCY | 1 cut(s) | 11 |
| BstZ17I | GTATAC | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 31 |
| Cfr13I | GGNCC | 1 cut(s) | 29 |
| CviJI | RGCY | 5 cut(s) | 24, 31, 98, 134, 189 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 31, 98, 134, 189 |
| DpnI | GATC | 2 cut(s) | 13, 18 |
| DpnII | GATC | 2 cut(s) | 11, 16 |
| EcoRII | CCWGG | 1 cut(s) | 139 |
| FaiI | YATR | 8 cut(s) | 45, 111, 120, 193, 195, 197, 213, 215 |
| FaqI | GGGAC | 1 cut(s) | 48 |
| FauNDI | CATATG | 1 cut(s) | 213 |
| FblI | GTMKAC | 1 cut(s) | 44 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 150 |
| GluI | GCNGC | 1 cut(s) | 96 |
| GsuI | CTGGAG | 2 cut(s) | 51, 59 |
| HaeIII | GGCC | 1 cut(s) | 31 |
| HapII | CCGG | 1 cut(s) | 32 |
| HpaII | CCGG | 1 cut(s) | 32 |
| HphI | GGTGA | 2 cut(s) | 160, 171 |
| Hpy166II | GTNNAC | 1 cut(s) | 45 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy8I | GTNNAC | 1 cut(s) | 45 |
| HpyAV | CCTTC | 1 cut(s) | 84 |
| Kzo9I | GATC | 2 cut(s) | 11, 16 |
| LpnPI | CCDG | 7 cut(s) | 5, 23, 45, 81, 126, 153, 195 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| MaeI | CTAG | 1 cut(s) | 150 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MalI | GATC | 2 cut(s) | 13, 18 |
| MboI | GATC | 2 cut(s) | 11, 16 |
| MflI | RGATCY | 1 cut(s) | 11 |
| MluCI | AATT | 4 cut(s) | 76, 103, 172, 235 |
| MnlI | CCTC | 2 cut(s) | 110, 146 |
| MseI | TTAA | 1 cut(s) | 238 |
| MspI | CCGG | 1 cut(s) | 32 |
| MspR9I | CCNGG | 2 cut(s) | 33, 141 |
| MvaI | CCWGG | 1 cut(s) | 141 |
| NciI | CCSGG | 1 cut(s) | 33 |
| NdeI | CATATG | 1 cut(s) | 213 |
| NdeII | GATC | 2 cut(s) | 11, 16 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| Psp6I | CCWGG | 1 cut(s) | 139 |
| PspGI | CCWGG | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 29 |
| PsuI | RGATCY | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 238 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 2 cut(s) | 11, 16 |
| Sau96I | GGNCC | 1 cut(s) | 29 |
| ScrFI | CCNGG | 2 cut(s) | 33, 141 |
| SetI | ASST | 4 cut(s) | 136, 157, 184, 191 |
| Sse9I | AATT | 4 cut(s) | 76, 103, 172, 235 |
| SspI | AATATT | 1 cut(s) | 57 |
| SspMI | CTAG | 1 cut(s) | 150 |
| StyD4I | CCNGG | 2 cut(s) | 31, 139 |
| TasI | AATT | 4 cut(s) | 76, 103, 172, 235 |
| Tru1I | TTAA | 1 cut(s) | 238 |
| Tru9I | TTAA | 1 cut(s) | 238 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 95 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| XmiI | GTMKAC | 1 cut(s) | 44 |
| XspI | CTAG | 1 cut(s) | 150 |