Rorug06G0166200

Phosphatidylinositol phosphatidylcholine transfer protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002498
Physical Location & Seq
Forward (+)
23961032 .. 23970753
9722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0166200.1

Sequence Viewer

Length: 2853 bp
ATGATCAAGAACAAAAATCATACCTTTCTCTTCTCATGGATATTTCTGGCCATGATTAATGCACAAAATACAACAATCCCAGTGAACGTTGGTGTTGTTCTTGACTTTGATTCAGGGGCCGGGAAGACTGCAAAGGTGTACTTGAGTTGCATGGAAATGGCCCTCTCAGATATTTATGCGTCTCATCCTTACTTCAAGACGAGGATAGTATTGAACACAAGGAACTCCAAACAAACTGTTGTTGGTGCAGCTGCGGCAGCTCTGGATCTGATAAAGAATGCAGAAGTTCTAGCAATATTAGGGCCTGAAACATCAACGCAGGCGAGCTTCATTGTTAATTTGGGAGACGAAGCTCATGTGCCCATTTTATCATTTTCTGCATCAGCACCTTATCTTACTTCGCTCCGGAGCCCTTACTTTTTCAGAATTACTCAAACCGACTCATACCAAGTGAAAGCCATTAGTAGCATTGTTCAAAATTTTGGATGGAGACAAGTTGTACCAATCTACGTCGACAATATGTATGGGGAGGGAATCATACCTTTTCTCATTGATGCCTTGCAAGATGTTGATGCTCATGTCCCTTACCGTAGTGTCATTTCCCCATCAGCAACTGGTGACCAGATTATAAAAGAGCTTTACAAATTAATGACAATGCAAACTAGAGTATTCATCGTGCATATGAATTCCAATCTTTGCTCTAAGCTGTTTTCCAAGGCAAAAGAGATAGGAATGATGAGTAAAGGATATGTTTGGATATTGACCGATGGGATTTCTAATCGTTTAAATTCGATGAATTCTTCAGTCATAGCTTCCATGGAAGGTGTGTTAGGTATCCAAACATTCATCCCGAGAACAACAGAACTTGAAAAATTCGAGCTCCGGTGGAAAGGACAATTCCAACAAGACAACCCAACCATTATAGATGTTCAATTGGATGTTTATGCACTTCAGGCTTATGATGCTGCTTTTGCATTAGCCATGTCAATTGAAAATGTTGGGATCAGTACAAGCTCTGAAATCCACAAGGATACTTCCTTCAACTCAACTGACCTTGATACTTATAAGGTCTCTGAAAATGGTCCTAAACTTGCTGAAGCATTATCAATTACTAGATTCAAAGGCATAGCTGGAGACTTCAAGCTTGTAGAAGGGCAACTTCAGTCATCAACTTTTACAATTGTTAATATAAAAAGTGAGGGAGAAAAACCAGTTGCATTTTGGACTCCGGAAAATCAAATGGTGAAACAGTTGAATGACTCAACAAACACAAGCATCCTTTCAACTAATTCCAAGAGCAATCTTGGACCAATTAAATGGCCTGGAAATCCTCTCTCTGTTCCAAGGGGATGGGAGATACCAACAAATGGCAAGAAGTTGATAATAGGAGTTCCTGTCAAGATTGATTTTACTGAATTTGTTAAGATCTCAAAAGATCCAAAGACCGGCACAATGGATGTCACTGGGTTCTGTATTGATGTCTTTCATGCTGCATTGAAAGTATTACCTTATGCTCTTCCTTATGAGTTCACTCCCTTCTCAAACCCTGATGGCACCAGTGCTGGCAATTATAATGATTTGGTCTATCAAGTACATCTTGGGAAGTTTGATGCCGTCGTCGGAGATACAACAATTAGAGCAAATAGGTCCTTGTATGTGGACTTTACAATGCCATACACAGAATCTGGTGTTGTAATGGTGGTGCCAATCATAGACAGAACGAGCAAGAATGCATGGGTTTTCTTAAAGCCATTGACTTGGGACTTGTGGCTTACAACTTTTTGTTTCTTCCTCTTTACTGGTTTTGTTGTTTGGGTTCTTGAACATCGAATTAATGAAGATTTTCGTGGTCCTCCTTCACATCAATTTGGGACTAGTGTCTGGTTTTCCTTCTCAACGATGGTTTTCTCACACAAAGAGAATGTGATTAGCAACTTGGCTAGATTCGTGATGATTATATGGGTATTCGTTGTCCTAATATTGACACAAAGTTATACAGCTAATCTAGCATCGCTATTAACTGTCCAACAACTTAAGCCAACCGTTGTTGATATTAAGGATCTATTAAGGAAGGGGGATAATGTCGGGTACGCTAAGAATGCTTATGTTTATGGAGTACTCTTGAAAGTAGGTTTCAAAGATTCAAATCTTAAAGATTTTAGAACTATGGAAGCACTTGATGAAGCTCTTTCAAAAGGGAGTGCAAATGGTGGTATTGCTGCTTTTGTTGATGAAACCCCAACTATGAAGCTTTTTCTTGCAAAGTATTGTTCTAAATATACCATGATTGGACCCATCTTTAAAACTGAAGGGTTTGGTTTTGTGTTTCCAAAGCGTTCCCCTCTTGTACATGATGTTTCACAAGCAATCCTAGCCGTAACTGAAGGAGAGCAGATGATGAGCATTGAATCAAAATGGTTCAAGAAAGAAAGCAATTGTCAAAGCTCCAGCCAACTGGGTTCTAGCAATAGTCTTGGACTCGATAGCTTTTGGGGGTTATTCCTCATTGCTGGAGTGGCTTCAATATTCGCTCTCATCATATTTTTAGCTTCATTTCTTTACGAGAATGGACACCTATTGATAGATTCTGATTCAGAAGCTTCGACATCAGAAAGGATTGGGGTCTTGTTCAAAATTTTCAATCAGAAAGACCTAAATTCTCGTACATTTAAGAGCAGTCAACCGAGAGATCGTATCACTGATGCTAGAGATGAAGTAAACATCTCACCAAGTAACAACTGGCCAGAAAGTCCATTTAGCTACAACAATCACAGTGATGGCAATTCAGAGCAACACATACCACCTCCAGGTCAAGCAACTTTAGAATCAGTTCCAAGGCATGGATTCCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

950

Amino Acids

105.63

Weight (kDa)

6.19

Isoelectric Point (pI)

28.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 27 - 337 2.6e-18 Periplasmic binding protein
ANF_receptor PF01094 49 - 398 2e-83 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 478 - 568 1.6e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 487 - 808 4e-08 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 586 - 840 7.2e-41 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 629, 1065, 1572
AccB1I GGYRCC 2 cut(s) 1553, 1702
AccB7I CCANNNNNTGG 2 cut(s) 1367, 2840
AccI GTMKAC 1 cut(s) 513
AccIII TCCGGA 2 cut(s) 405, 1228
AciI CCGC 1 cut(s) 254
AclI AACGTT 1 cut(s) 87
AclWI GGATC 4 cut(s) 273, 1010, 1430, 2067
AcoI YGGCCR 2 cut(s) 48, 2741
AcsI RAATTY 8 cut(s) 478, 685, 787, 796, 872, 1415, 2634, 2656
AcuI CTGAAG 6 cut(s) 786, 935, 1116, 1145, 2328, 2403
AfaI GTAC 8 cut(s) 140, 501, 1009, 1593, 2090, 2118, 2349, 2665
AfiI CCNNNNNNNGG 4 cut(s) 1367, 1445, 2807, 2840
AflII CTTAAG 1 cut(s) 2033
AhlI ACTAGT 1 cut(s) 1874
AjnI CCWGG 2 cut(s) 1321, 2806
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 5 cut(s) 186, 339, 484, 1075, 1128
AlwI GGATC 4 cut(s) 273, 1010, 1430, 2067
AlwNI CAGNNNCTG 2 cut(s) 614, 1685
Ama87I CYCGRG 1 cut(s) 850
Aor13HI TCCGGA 2 cut(s) 405, 1228
AoxI GGCC 6 cut(s) 48, 117, 159, 302, 1319, 2741
ApeKI GCWGC 6 cut(s) 248, 251, 257, 965, 1490, 2219
ApoI RAATTY 8 cut(s) 478, 685, 787, 796, 872, 1415, 2634, 2656
AseI ATTAAT 3 cut(s) 57, 647, 1833
Asp700I GAANNNNTTC 2 cut(s) 1842, 2829
AspS9I GGNCC 8 cut(s) 117, 160, 302, 1082, 1307, 1647, 1850, 2291
AsuC2I CCSGG 1 cut(s) 121
AsuHPI GGTGA 3 cut(s) 629, 1255, 2718
AvaI CYCGRG 1 cut(s) 850
AvaII GGWCC 5 cut(s) 1082, 1307, 1647, 1850, 2291
BaeGI GKGCMC 1 cut(s) 363
BalI TGGCCA 2 cut(s) 50, 2743
BanI GGYRCC 2 cut(s) 1553, 1702
BanII GRGCYC 2 cut(s) 413, 882
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 6 cut(s) 238, 260, 269, 952, 1477, 2206
BccI CCATC 8 cut(s) 480, 613, 761, 1344, 1544, 1894, 2303, 2771
BceAI ACGGC 2 cut(s) 1598, 2360
BciT130I CCWGG 2 cut(s) 1323, 2808
BciVI GTATCC 2 cut(s) 845, 1024
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 121
BcoDI GTCTC 5 cut(s) 186, 339, 484, 1075, 1128
BcuI ACTAGT 1 cut(s) 1874
BfaI CTAG 9 cut(s) 290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
BfrI CTTAAG 1 cut(s) 2033
BfuI GTATCC 2 cut(s) 845, 1024
BglII AGATCT 1 cut(s) 1425
BisI GCNGC 7 cut(s) 249, 252, 255, 258, 966, 1491, 2220
BlsI GCNGC 7 cut(s) 250, 253, 256, 259, 967, 1492, 2221
BmcAI AGTACT 1 cut(s) 2118
Bme1390I CCNGG 3 cut(s) 121, 1323, 2808
Bme18I GGWCC 5 cut(s) 1082, 1307, 1647, 1850, 2291
BmeT110I CYCGRG 1 cut(s) 850
BmgT120I GGNCC 8 cut(s) 117, 160, 302, 1082, 1307, 1647, 1850, 2291
BmiI GGNNCC 5 cut(s) 118, 410, 1555, 1704, 2293
BmrFI CCNGG 3 cut(s) 121, 1323, 2808
BmrI ACTGGG 3 cut(s) 74, 1473, 2465
BmsI GCATC 8 cut(s) 389, 544, 562, 952, 1284, 1600, 2018, 2692
BmuI ACTGGG 3 cut(s) 74, 1473, 2465
BoxI GACNNNNGTC 1 cut(s) 1877
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 4 cut(s) 1152, 2431, 2532, 2790
BpuEI CTTGAG 1 cut(s) 163
BpuMI CCSGG 1 cut(s) 121
BsaBI GATNNNNATC 1 cut(s) 2145
BsaI GGTCTC 1 cut(s) 1075
BsaJI CCNNGG 4 cut(s) 714, 816, 1343, 2834
BsaWI WCCGGW 3 cut(s) 405, 882, 1228
BsaXI ACNNNNNCTCC 2 cut(s) 1380, 1410
Bsc4I CCNNNNNNNGG 4 cut(s) 1367, 1445, 2807, 2840
Bse118I RCCGGY 1 cut(s) 1445
Bse1I ACTGG 8 cut(s) 80, 619, 1211, 1468, 1557, 1804, 2460, 2744
Bse3DI GCAATG 1 cut(s) 2505
Bse8I GATNNNNATC 1 cut(s) 2145
BseAI TCCGGA 2 cut(s) 405, 1228
BseBI CCWGG 2 cut(s) 1323, 2808
BseDI CCNNGG 4 cut(s) 714, 816, 1343, 2834
BseGI GGATG 7 cut(s) 184, 491, 846, 943, 1275, 1355, 1462
BseJI GATNNNNATC 1 cut(s) 2145
BseLI CCNNNNNNNGG 4 cut(s) 1367, 1445, 2807, 2840
BseMI GCAATG 1 cut(s) 2505
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 8 cut(s) 80, 619, 1211, 1468, 1557, 1804, 2460, 2744
BseSI GKGCMC 1 cut(s) 363
BseXI GCAGC 6 cut(s) 238, 260, 269, 952, 1477, 2206
BsgI GTGCAG 1 cut(s) 267
BshFI GGCC 6 cut(s) 50, 119, 161, 304, 1321, 2743
BshNI GGYRCC 2 cut(s) 1553, 1702
BsiHKAI GWGCWC 1 cut(s) 882
BsiHKCI CYCGRG 1 cut(s) 850
BsiSI CCGG 5 cut(s) 120, 406, 883, 1229, 1446
BslFI GGGAC 3 cut(s) 566, 1775, 1885
BslI CCNNNNNNNGG 4 cut(s) 1367, 1445, 2807, 2840
BsmAI GTCTC 5 cut(s) 186, 339, 484, 1075, 1128
BsmBI CGTCTC 2 cut(s) 186, 339
BsmFI GGGAC 3 cut(s) 566, 1775, 1885
BsmI GAATGC 3 cut(s) 283, 1735, 2104
BsnI GGCC 6 cut(s) 50, 119, 161, 304, 1321, 2743
Bso31I GGTCTC 1 cut(s) 1075
BsoBI CYCGRG 1 cut(s) 850
Bsp1286I GDGCHC 3 cut(s) 363, 413, 882
Bsp13I TCCGGA 2 cut(s) 405, 1228
Bsp1407I TGTACA 1 cut(s) 2347
Bsp143I GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 1 cut(s) 254
BspANI GGCC 6 cut(s) 50, 119, 161, 304, 1321, 2743
BspCNI CTCAG 1 cut(s) 179
BspEI TCCGGA 2 cut(s) 405, 1228
BspLI GGNNCC 5 cut(s) 118, 410, 1555, 1704, 2293
BspPI GGATC 4 cut(s) 273, 1010, 1430, 2067
BspQI GCTCTTC 1 cut(s) 1521
BspT107I GGYRCC 2 cut(s) 1553, 1702
BspTI CTTAAG 1 cut(s) 2033
BspTNI GGTCTC 1 cut(s) 1075
BsrDI GCAATG 1 cut(s) 2505
BsrFI RCCGGY 1 cut(s) 1445
BsrGI TGTACA 1 cut(s) 2347
BsrI ACTGG 8 cut(s) 80, 619, 1211, 1468, 1557, 1804, 2460, 2744
BssAI RCCGGY 1 cut(s) 1445
BssECI CCNNGG 4 cut(s) 714, 816, 1343, 2834
BssMI GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
BssT1I CCWWGG 4 cut(s) 714, 816, 1343, 2834
Bst2UI CCWGG 2 cut(s) 1323, 2808
Bst4CI ACNGT 6 cut(s) 238, 590, 1251, 2023, 2044, 2774
Bst6I CTCTTC 2 cut(s) 35, 1521
BstAFI CTTAAG 1 cut(s) 2033
BstAUI TGTACA 1 cut(s) 2347
BstC8I GCNNGC 3 cut(s) 321, 325, 1564
BstDEI CTNAG 3 cut(s) 166, 702, 2094
BstDSI CCRYGG 1 cut(s) 816
BstEII GGTNACC 1 cut(s) 617
BstF5I GGATG 7 cut(s) 184, 491, 846, 943, 1275, 1355, 1462
BstKTI GATC 7 cut(s) 6, 268, 1005, 1428, 1438, 2062, 2692
BstMAI GTCTC 5 cut(s) 186, 339, 484, 1075, 1128
BstMBI GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
BstMWI GCNNNNNNNGC 9 cut(s) 254, 257, 953, 962, 971, 2006, 2099, 2372, 2516
BstNI CCWGG 2 cut(s) 1323, 2808
BstPAI GACNNNNGTC 1 cut(s) 1877
BstPI GGTNACC 1 cut(s) 617
BstSCI CCNGG 3 cut(s) 119, 1321, 2806
BstSLI GKGCMC 1 cut(s) 363
BstV1I GCAGC 6 cut(s) 238, 260, 269, 952, 1477, 2206
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 4 cut(s) 265, 1425, 1435, 2059
BstXI CCANNNNNNTGG 4 cut(s) 1317, 1350, 1758, 2455
BstYI RGATCY 4 cut(s) 265, 1425, 1435, 2059
BsuI GTATCC 2 cut(s) 845, 1024
BsuRI GGCC 6 cut(s) 50, 119, 161, 304, 1321, 2743
BtgI CCRYGG 1 cut(s) 816
BtgZI GCGATG 1 cut(s) 1995
BtsCI GGATG 7 cut(s) 184, 491, 846, 943, 1275, 1355, 1462
BtsIMutI CAGTG 5 cut(s) 87, 1461, 1564, 2697, 2779
Cac8I GCNNGC 3 cut(s) 321, 325, 1564
CaiI CAGNNNCTG 2 cut(s) 614, 1685
Cfr10I RCCGGY 1 cut(s) 1445
Cfr13I GGNCC 8 cut(s) 117, 160, 302, 1082, 1307, 1647, 1850, 2291
CseI GACGC 1 cut(s) 168
Csp6I GTAC 8 cut(s) 139, 500, 1008, 1592, 2089, 2117, 2348, 2664
CviQI GTAC 8 cut(s) 139, 500, 1008, 1592, 2089, 2117, 2348, 2664
DdeI CTNAG 3 cut(s) 166, 702, 2094
DpnI GATC 7 cut(s) 5, 267, 1004, 1427, 1437, 2061, 2691
DpnII GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
DraI TTTAAA 2 cut(s) 786, 2302
EaeI YGGCCR 2 cut(s) 48, 2741
Eam1104I CTCTTC 2 cut(s) 35, 1521
EarI CTCTTC 2 cut(s) 35, 1521
Ecl136II GAGCTC 1 cut(s) 880
Eco130I CCWWGG 4 cut(s) 714, 816, 1343, 2834
Eco24I GRGCYC 2 cut(s) 413, 882
Eco31I GGTCTC 1 cut(s) 1075
Eco47I GGWCC 5 cut(s) 1082, 1307, 1647, 1850, 2291
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 6 cut(s) 786, 935, 1116, 1145, 2328, 2403
Eco88I CYCGRG 1 cut(s) 850
Eco91I GGTNACC 1 cut(s) 617
EcoICRI GAGCTC 1 cut(s) 880
EcoO109I RGGNCCY 2 cut(s) 302, 1647
EcoO65I GGTNACC 1 cut(s) 617
EcoRI GAATTC 2 cut(s) 685, 796
EcoRII CCWGG 2 cut(s) 1321, 2806
EcoT14I CCWWGG 4 cut(s) 714, 816, 1343, 2834
EcoT22I ATGCAT 1 cut(s) 1735
EcoT38I GRGCYC 2 cut(s) 413, 882
ErhI CCWWGG 4 cut(s) 714, 816, 1343, 2834
Esp3I CGTCTC 2 cut(s) 186, 339
FalI AAGNNNNNCTT 6 cut(s) 125, 157, 1143, 1175, 1581, 1613
FaqI GGGAC 3 cut(s) 566, 1775, 1885
FauNDI CATATG 1 cut(s) 681
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 513
Fnu4HI GCNGC 7 cut(s) 249, 252, 255, 258, 966, 1491, 2220
FokI GGATG 7 cut(s) 171, 498, 833, 950, 1262, 1362, 1469
FriOI GRGCYC 2 cut(s) 413, 882
Fsp4HI GCNGC 7 cut(s) 249, 252, 255, 258, 966, 1491, 2220
FspBI CTAG 9 cut(s) 290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
GluI GCNGC 7 cut(s) 249, 252, 255, 258, 966, 1491, 2220
GsuI CTGGAG 4 cut(s) 1152, 2431, 2532, 2790
HaeIII GGCC 6 cut(s) 50, 119, 161, 304, 1321, 2743
HapII CCGG 5 cut(s) 120, 406, 883, 1229, 1446
HgaI GACGC 1 cut(s) 168
HincII GTYRAC 2 cut(s) 514, 2681
HindII GTYRAC 2 cut(s) 514, 2681
HindIII AAGCTT 3 cut(s) 1142, 2249, 2598
HpaII CCGG 5 cut(s) 120, 406, 883, 1229, 1446
HphI GGTGA 3 cut(s) 629, 1255, 2718
Hpy166II GTNNAC 7 cut(s) 85, 139, 514, 1530, 1660, 2681, 2719
Hpy8I GTNNAC 7 cut(s) 85, 139, 514, 1530, 1660, 2681, 2719
Hpy99I CGWCG 3 cut(s) 515, 1619, 1622
HpyAV CCTTC 9 cut(s) 815, 1048, 1145, 1546, 1866, 1900, 2065, 2303, 2378
HpyCH4III ACNGT 6 cut(s) 238, 590, 1251, 2023, 2044, 2774
HpyCH4IV ACGT 2 cut(s) 87, 510
HpyF10VI GCNNNNNNNGC 9 cut(s) 254, 257, 953, 962, 971, 2006, 2099, 2372, 2516
HpyF3I CTNAG 3 cut(s) 166, 702, 2094
HpySE526I ACGT 2 cut(s) 87, 510
Kpn2I TCCGGA 2 cut(s) 405, 1228
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
LguI GCTCTTC 1 cut(s) 1521
LmnI GCTCC 4 cut(s) 408, 408, 885, 2450
Lsp1109I GCAGC 6 cut(s) 238, 260, 269, 952, 1477, 2206
LweI GCATC 8 cut(s) 389, 544, 562, 952, 1284, 1600, 2018, 2692
MaeI CTAG 9 cut(s) 290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
MaeII ACGT 2 cut(s) 87, 510
MaeIII GTNAC 4 cut(s) 617, 1459, 2377, 2732
MalI GATC 7 cut(s) 5, 267, 1004, 1427, 1437, 2061, 2691
MboI GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
MboII GAAGA 6 cut(s) 22, 136, 792, 1508, 1780, 1850
MfeI CAATTG 4 cut(s) 932, 987, 1179, 2434
MflI RGATCY 4 cut(s) 265, 1425, 1435, 2059
MhlI GDGCHC 3 cut(s) 363, 413, 882
MlsI TGGCCA 2 cut(s) 50, 2743
MluNI TGGCCA 2 cut(s) 50, 2743
MlyI GAGTC 4 cut(s) 434, 1219, 1253, 2472
MmeI TCCRAC 3 cut(s) 925, 1600, 2050
Mox20I TGGCCA 2 cut(s) 50, 2743
Mph1103I ATGCAT 1 cut(s) 1735
MroI TCCGGA 2 cut(s) 405, 1228
MroXI GAANNNNTTC 2 cut(s) 1842, 2829
MscI TGGCCA 2 cut(s) 50, 2743
MslI CAYNNNNRTG 2 cut(s) 155, 2775
Msp20I TGGCCA 2 cut(s) 50, 2743
MspA1I CMGCKG 1 cut(s) 251
MspCI CTTAAG 1 cut(s) 2033
MspI CCGG 5 cut(s) 120, 406, 883, 1229, 1446
MspR9I CCNGG 3 cut(s) 121, 1323, 2808
MunI CAATTG 4 cut(s) 932, 987, 1179, 2434
Mva1269I GAATGC 3 cut(s) 283, 1735, 2104
MvaI CCWGG 2 cut(s) 1323, 2808
MwoI GCNNNNNNNGC 9 cut(s) 254, 257, 953, 962, 971, 2006, 2099, 2372, 2516
NciI CCSGG 1 cut(s) 121
NcoI CCATGG 1 cut(s) 816
NdeI CATATG 1 cut(s) 681
NdeII GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
NlaIV GGNNCC 5 cut(s) 118, 410, 1555, 1704, 2293
NmuCI GTSAC 2 cut(s) 617, 1459
NsiI ATGCAT 1 cut(s) 1735
PciSI GCTCTTC 1 cut(s) 1521
PctI GAATGC 3 cut(s) 283, 1735, 2104
PdmI GAANNNNTTC 2 cut(s) 1842, 2829
PflMI CCANNNNNTGG 2 cut(s) 1367, 2840
PkrI GCNGC 7 cut(s) 250, 253, 256, 259, 967, 1492, 2221
PleI GAGTC 4 cut(s) 434, 1219, 1253, 2472
PpsI GAGTC 4 cut(s) 434, 1219, 1253, 2472
PpuMI RGGWCCY 1 cut(s) 1647
PshAI GACNNNNGTC 1 cut(s) 1877
PshBI ATTAAT 3 cut(s) 57, 647, 1833
PsiI TTATAA 3 cut(s) 629, 1065, 1572
Psp124BI GAGCTC 1 cut(s) 882
Psp1406I AACGTT 1 cut(s) 87
Psp5II RGGWCCY 1 cut(s) 1647
Psp6I CCWGG 2 cut(s) 1321, 2806
PspEI GGTNACC 1 cut(s) 617
PspGI CCWGG 2 cut(s) 1321, 2806
PspN4I GGNNCC 5 cut(s) 118, 410, 1555, 1704, 2293
PspPI GGNCC 8 cut(s) 117, 160, 302, 1082, 1307, 1647, 1850, 2291
PspPPI RGGWCCY 1 cut(s) 1647
PstNI CAGNNNCTG 2 cut(s) 614, 1685
PsuI RGATCY 4 cut(s) 265, 1425, 1435, 2059
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 8 cut(s) 140, 501, 1009, 1593, 2090, 2118, 2349, 2665
RsaNI GTAC 8 cut(s) 139, 500, 1008, 1592, 2089, 2117, 2348, 2664
RseI CAYNNNNRTG 2 cut(s) 155, 2775
SacI GAGCTC 1 cut(s) 882
SalI GTCGAC 1 cut(s) 512
SapI GCTCTTC 1 cut(s) 1521
SatI GCNGC 7 cut(s) 249, 252, 255, 258, 966, 1491, 2220
Sau3AI GATC 7 cut(s) 3, 265, 1002, 1425, 1435, 2059, 2689
Sau96I GGNCC 8 cut(s) 117, 160, 302, 1082, 1307, 1647, 1850, 2291
ScaI AGTACT 1 cut(s) 2118
SchI GAGTC 4 cut(s) 434, 1219, 1253, 2472
ScrFI CCNGG 3 cut(s) 121, 1323, 2808
SduI GDGCHC 3 cut(s) 363, 413, 882
SfaNI GCATC 8 cut(s) 389, 544, 562, 952, 1284, 1600, 2018, 2692
SinI GGWCC 5 cut(s) 1082, 1307, 1647, 1850, 2291
SmiMI CAYNNNNRTG 2 cut(s) 155, 2775
SmlI CTYRAG 2 cut(s) 142, 2033
SmoI CTYRAG 2 cut(s) 142, 2033
SpeI ACTAGT 1 cut(s) 1874
SsiI CCGC 1 cut(s) 254
SspI AATATT 3 cut(s) 297, 1980, 2526
SspMI CTAG 9 cut(s) 290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
SstI GAGCTC 1 cut(s) 882
StyD4I CCNGG 3 cut(s) 119, 1321, 2806
StyI CCWWGG 4 cut(s) 714, 816, 1343, 2834
TaaI ACNGT 6 cut(s) 238, 590, 1251, 2023, 2044, 2774
TaiI ACGT 2 cut(s) 90, 513
TaqI TCGA 6 cut(s) 513, 791, 876, 1828, 2481, 2603
TaqII GACCGA 1 cut(s) 779
TatI WGTACW 5 cut(s) 138, 1007, 1591, 2116, 2347
TauI GCSGC 1 cut(s) 257
TscAI CASTG 5 cut(s) 87, 1468, 1564, 2704, 2779
TseFI GTSAC 2 cut(s) 617, 1459
TseI GCWGC 6 cut(s) 248, 251, 257, 965, 1490, 2219
Tsp45I GTSAC 2 cut(s) 617, 1459
TspRI CASTG 5 cut(s) 87, 1468, 1564, 2704, 2779
Van91I CCANNNNNTGG 2 cut(s) 1367, 2840
Vha464I CTTAAG 1 cut(s) 2033
VpaK11BI GGWCC 5 cut(s) 1082, 1307, 1647, 1850, 2291
VspI ATTAAT 3 cut(s) 57, 647, 1833
XapI RAATTY 8 cut(s) 478, 685, 787, 796, 872, 1415, 2634, 2656
XcmI CCANNNNNNNNNTGG 2 cut(s) 1218, 2736
XmiI GTMKAC 1 cut(s) 513
XmnI GAANNNNTTC 2 cut(s) 1842, 2829
XspI CTAG 9 cut(s) 290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
ZrmI AGTACT 1 cut(s) 2118
Zsp2I ATGCAT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.