Rorug06G0166300

Phosphatidylinositol phosphatidylcholine transfer protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002498
Physical Location & Seq
Forward (+)
23980107 .. 24002118
22012 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0166300.1

Sequence Viewer

Length: 2871 bp
ATGATCAACAAGAACCTCGCAAATCTTACTCTTGTTGTTTTCATTTGTTTCTTCTTTGTTTCATCAAGAATTGGCTTGGCCATGTTAGGAAATGAAACCATCCCCGTCAATGTGGGGGTTGTTCTTGATGATCTTCATTCAATGGAGGGGAAGGCTTGGTTGAGCTGTATCAAAATGGCCCTTTCAGATTTCTATGCTTCTCATTCTCACTACAAGACTAGGCTGGTTTTGAACGTTAGGGACTCCAATCAAAACGTTGTAGGGGCAGCTGCTGCAGCTCTGGATCTTATAAAAAATGCAGAAGTGCAAGCAATATTAGGGCCAGTGACATCAATGCAGGCAAACTTTGTTATCAACCTGGGAGACCAAGCTCATGTACCTATTATATCATTTTCTGCAACAAGCCCTTCTCTCACTTCTCTCCGGAGCTCCTACTTTTTCCGATTTACACAAAATGACTCATCTCAAGTGAACACCATAAGTGCTATTGTAAAAGGTTTTGGATGGAGACAAGTTGTGCTTGTCTATATAGACAATGATTTTGGGGAGGGAGTCATGTCACATATAACTGATGCTCTACAAGAGGTTGATGCTTTTGTCCCCTACCGGAGTGCCATTTCCCCATCAGCCACAGATAATCAAATTCTTGAAGAACTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATAGTCCACATGACTTCTGATCTATCTTCTAGGCTGTTTGCCAAAGCTAAAGAGCTTGGAATGATGAGCGAAGGATATGCTTGGCTAACCACTAATGAGATACCAAACAGTTTAAAGTCGATGAAATCTTCAGTAATCCATTCGATGAGTGGTTTACTGGGTGTACAAACTTACGTTCCAATAACAAGTGAGCTCGATGAATTCAACAAAAGATGGAAACAACAATTTCAAAAAGAGAATCCAGCCATCATTGATGCTGATTATGAAGTTTTTGGATTATGGGCTTATGATGCTACAGTTGCACTAGCAATGGCAGTTGAAGACGTTGGGATTACAAACTCTGGCTTCAAAAACTCAAATGCTTCCTTCAACTCAACAGATCTTGATACTCTTAAGGTATCTCAATATGGTCCAAAACTTGCTCAAGCATTGTCAAGTACTAGATTCAACGGCTTAGCTGGAGACGTTAGCCTCATTGACGGGCAGCTTCAATCATCCACTTTTACAATAGTCAATATAAATGGGGATGTAGCAAGAGGAGTTGGATTTTGGACATTACAAAGTGGAATCAAGAAAACATTGGGTCAATCCTCCGCAAACTGTTCAACATTGAATTGCAATCTTGGCCCAATTATATGGCCGGGAGATTCCTTCTCTGTTCCCAAGGGATGGGAGATTCCGACAAATGGCAAGAAGTTGAGAATAGGAGTTCCAATGAAGGATGGCTTTACTGAGTTTGTTAAGGTAACCAAAGATCCAAGTACCAACAGAACAGATATCACTGGGTTTAGTATCGACGTGTTTAAGGCTGCGGTGGAATTGCTACCATATGCTCTTCCTTATGAGTTGATTCCATTTGCAAAGCCTGATGGCACCAGTGCAGGCACTTACAATGATTTAGTCTATCAAGTGTTTCTTGAGACATTTGATGCTGTGGTGGGGGATACAACAATCCGAGCAAATAGGTCCTTGTATGTGGACTTTTCAATGCCGTATACGGAATCTGGTATTGTGATGGTTGTGCCAATAGTAGACACTAGAAGTAAAAATGCATGGGCTTTCTTGAAACCTTTGACATGGGACCTTTGGCTCACGATTTCTTGTTTCTTGGTCTTTATTGGTTTTGTGGTGTGGGTTCTTGAACATCGAATTAATGACGATTTTCGTGGCCCTCCCCTACATCAGGTCGGCACCAGCATCTGGTTCTCTTTCTCCACAATGGTTTTTGCACAGAGGGAGAAAGTGGTTAGTAACTTGGCCAGATTCGTGATGATAATATGGGTATTTGTAATGCTAATCCTGACACAAAGTTACACGGCTAGTTTAGCATCACTATTAACTGTCCAACAACTCCACCCTATTGTTACCGATATAAAGGATCTGTTAAGGAACGGGGATACCGTCGGATATGCAGAGAATACATACGTTTACAATGTCTTGAGAGAAGTAGGTTTTGATGATTCGAAACTTAAGGAGTTTAAATCTACAGAAGATTTGGATGCTCTTCTTTCGAAAGGAAGTGCAAATGGTGGCATTGCTGCTGCAATTGATGAAACACCCAACATGAAGGTTTTTCTTGGAAAATATTGTTCCAAATATACAATGATTGGACCCATCTTTAAAACGGATGGGTTTGCCTTTGTCTTTCCAAAACGCTCCCCTCTTGTACCAGATATTTCGCATGCAGTTCTAAGCGTGACTGAAGGAGAAAAGATACTTGACTTTGAAAATAAATGGTTCAAGAAAGATAGTAACTGTGAAGACTTGAGTGCCCCAAAAGTGTCTAGCTATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTATTCCTCGTTGCCGGAGTGGCTTCAATAATTGCTCTTGTCATTTTTTTTGCTTCATTCACATACAGGCATAGACACATCTTGGTGCACCCTGATTCAAGAGCATCGACATGGGGAAGGATTCGGGTCATGTTCAAAATTTTCAATGAAAAAGATCTCGACTGTCATACATTCAAAAGTAGTCCACCACATGATTCAGTTAAGGCGTCACCAAACAACTTCCCAGAAAGTCCACTTAGCTATACTACAAACCAGACTGATAGGAATGTTGTGTTCTTTGGAGAGCAACAAACACCATCAACGAGTCAAGCGTCTCCTGAAGTAAATTTTGAAGAGCTTTCTTTTGCATTTCCAGAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

956

Amino Acids

105.95

Weight (kDa)

5.57

Isoelectric Point (pI)

31.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 47 - 395 8.6e-24 Periplasmic binding protein
ANF_receptor PF01094 53 - 406 1.8e-84 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 481 - 571 7.9e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 589 - 844 8e-38 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 290
AccB1I GGYRCC 2 cut(s) 1562, 1880
AccB7I CCANNNNNTGG 2 cut(s) 1359, 1890
AccI GTMKAC 2 cut(s) 1685, 1722
AccIII TCCGGA 1 cut(s) 423
AciI CCGC 2 cut(s) 1284, 1502
AclI AACGTT 2 cut(s) 234, 255
AclWI GGATC 3 cut(s) 291, 1439, 2076
AcoI YGGCCR 3 cut(s) 78, 1328, 1947
AcsI RAATTY 4 cut(s) 642, 890, 2646, 2833
AcuI CTGAAG 3 cut(s) 804, 2412, 2847
AcyI GRCGYC 1 cut(s) 2714
AfaI GTAC 5 cut(s) 378, 855, 1129, 1453, 2358
AfiI CCNNNNNNNGG 4 cut(s) 1359, 1376, 1873, 1890
AflII CTTAAG 2 cut(s) 1082, 2159
AflIII ACRYGT 1 cut(s) 1488
AjiI CACGTC 1 cut(s) 1489
AjnI CCWGG 1 cut(s) 357
Alw21I GWGCWC 3 cut(s) 431, 885, 2598
Alw26I GTCTC 5 cut(s) 357, 502, 1146, 1604, 2826
Alw44I GTGCAC 1 cut(s) 2594
AlwI GGATC 3 cut(s) 291, 1439, 2076
AlwNI CAGNNNCTG 2 cut(s) 272, 1890
Aor13HI TCCGGA 1 cut(s) 423
AoxI GGCC 9 cut(s) 78, 177, 320, 1315, 1328, 1858, 1947, 2488, 2506
ApaLI GTGCAC 1 cut(s) 2594
ApeKI GCWGC 8 cut(s) 266, 269, 272, 275, 1174, 1499, 2228, 2231
ApoI RAATTY 4 cut(s) 642, 890, 2646, 2833
ArsI GACNNNNNNTTYG 2 cut(s) 524, 556
AseI ATTAAT 1 cut(s) 1842
AspS9I GGNCC 9 cut(s) 178, 320, 1100, 1316, 1656, 1771, 1859, 2300, 2506
AsuC2I CCSGG 1 cut(s) 1332
AsuHPI GGTGA 1 cut(s) 2709
AsuII TTCGAA 2 cut(s) 2153, 2201
AvaII GGWCC 4 cut(s) 1100, 1656, 1771, 2300
BaeGI GKGCMC 2 cut(s) 2464, 2598
BalI TGGCCA 2 cut(s) 80, 1949
BanI GGYRCC 2 cut(s) 1562, 1880
BanII GRGCYC 2 cut(s) 431, 885
BbsI GAAGAC 3 cut(s) 679, 1017, 2457
Bbv12I GWGCWC 3 cut(s) 431, 885, 2598
BbvI GCAGC 8 cut(s) 256, 259, 278, 287, 1186, 1486, 2215, 2218
BceAI ACGGC 3 cut(s) 1156, 1666, 2022
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 1 cut(s) 359
BciVI GTATCC 2 cut(s) 1627, 2080
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1332
BcoDI GTCTC 5 cut(s) 357, 502, 1146, 1604, 2826
BfaI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1728, 2010, 2475
BfmI CTRYAG 4 cut(s) 273, 984, 2175, 2479
BfrI CTTAAG 2 cut(s) 1082, 2159
BfuI GTATCC 2 cut(s) 1627, 2080
BglI GCCNNNNNGGC 1 cut(s) 2528
BglII AGATCT 2 cut(s) 1069, 2662
BisI GCNGC 8 cut(s) 267, 270, 273, 276, 1175, 1500, 2229, 2232
BlpI GCTNAGC 1 cut(s) 1144
BlsI GCNGC 8 cut(s) 268, 271, 274, 277, 1176, 1501, 2230, 2233
BmcAI AGTACT 1 cut(s) 1129
Bme1390I CCNGG 2 cut(s) 359, 1332
Bme18I GGWCC 4 cut(s) 1100, 1656, 1771, 2300
BmgBI CACGTC 1 cut(s) 1489
BmgT120I GGNCC 9 cut(s) 178, 320, 1100, 1316, 1656, 1771, 1859, 2300, 2506
BmiI GGNNCC 5 cut(s) 1564, 1772, 1882, 2302, 2507
BmrFI CCNGG 2 cut(s) 359, 1332
BmrI ACTGGG 2 cut(s) 857, 1482
BmsI GCATC 9 cut(s) 562, 580, 934, 970, 1609, 1896, 2027, 2179, 2621
BmuI ACTGGG 2 cut(s) 857, 1482
BpiI GAAGAC 3 cut(s) 679, 1017, 2457
BpmI CTGGAG 1 cut(s) 1170
Bpu1102I GCTNAGC 1 cut(s) 1144
Bpu14I TTCGAA 2 cut(s) 2153, 2201
BpuEI CTTGAG 6 cut(s) 450, 1098, 1628, 2149, 2476, 2513
BpuMI CCSGG 1 cut(s) 1332
BsaHI GRCGYC 1 cut(s) 2714
BsaI GGTCTC 1 cut(s) 357
BsaJI CCNNGG 2 cut(s) 358, 1353
BsaWI WCCGGW 2 cut(s) 423, 606
Bsc4I CCNNNNNNNGG 4 cut(s) 1359, 1376, 1873, 1890
Bse1I ACTGG 4 cut(s) 323, 852, 1477, 1566
Bse3DI GCAATG 2 cut(s) 1005, 2223
BseAI TCCGGA 1 cut(s) 423
BseBI CCWGG 1 cut(s) 359
BseDI CCNNGG 2 cut(s) 358, 1353
BseGI GGATG 8 cut(s) 99, 509, 1184, 1222, 1364, 1417, 2194, 2323
BseLI CCNNNNNNNGG 4 cut(s) 1359, 1376, 1873, 1890
BseMI GCAATG 2 cut(s) 1005, 2223
BseMII CTCAG 1 cut(s) 1413
BseNI ACTGG 4 cut(s) 323, 852, 1477, 1566
BseRI GAGGAG 1 cut(s) 1242
BseSI GKGCMC 2 cut(s) 2464, 2598
BseXI GCAGC 8 cut(s) 256, 259, 278, 287, 1186, 1486, 2215, 2218
BsgI GTGCAG 1 cut(s) 1590
BshFI GGCC 9 cut(s) 80, 179, 322, 1317, 1330, 1860, 1949, 2490, 2508
BshNI GGYRCC 2 cut(s) 1562, 1880
BsiHKAI GWGCWC 3 cut(s) 431, 885, 2598
BsiSI CCGG 4 cut(s) 424, 607, 1331, 2523
BslFI GGGAC 3 cut(s) 254, 584, 1784
BslI CCNNNNNNNGG 4 cut(s) 1359, 1376, 1873, 1890
BsmAI GTCTC 5 cut(s) 357, 502, 1146, 1604, 2826
BsmBI CGTCTC 2 cut(s) 1146, 2826
BsmFI GGGAC 3 cut(s) 254, 584, 1784
BsnI GGCC 9 cut(s) 80, 179, 322, 1317, 1330, 1860, 1949, 2490, 2508
Bso31I GGTCTC 1 cut(s) 357
Bsp119I TTCGAA 2 cut(s) 2153, 2201
Bsp1286I GDGCHC 4 cut(s) 431, 885, 2464, 2598
Bsp13I TCCGGA 1 cut(s) 423
Bsp1407I TGTACA 1 cut(s) 853
Bsp143I GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
Bsp1720I GCTNAGC 1 cut(s) 1144
BspACI CCGC 2 cut(s) 1284, 1502
BspANI GGCC 9 cut(s) 80, 179, 322, 1317, 1330, 1860, 1949, 2490, 2508
BspCNI CTCAG 1 cut(s) 1414
BspEI TCCGGA 1 cut(s) 423
BspLI GGNNCC 5 cut(s) 1564, 1772, 1882, 2302, 2507
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 3 cut(s) 291, 1439, 2076
BspQI GCTCTTC 3 cut(s) 1530, 2199, 2835
BspT104I TTCGAA 2 cut(s) 2153, 2201
BspT107I GGYRCC 2 cut(s) 1562, 1880
BspTI CTTAAG 2 cut(s) 1082, 2159
BspTNI GGTCTC 1 cut(s) 357
BsrDI GCAATG 2 cut(s) 1005, 2223
BsrGI TGTACA 1 cut(s) 853
BsrI ACTGG 4 cut(s) 323, 852, 1477, 1566
BssECI CCNNGG 2 cut(s) 358, 1353
BssMI GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
BssNAI GTATAC 1 cut(s) 1686
BssNI GRCGYC 1 cut(s) 2714
BssT1I CCWWGG 1 cut(s) 1353
Bst1107I GTATAC 1 cut(s) 1686
Bst2UI CCWGG 1 cut(s) 359
Bst4CI ACNGT 7 cut(s) 800, 988, 1292, 2032, 2092, 2447, 2672
Bst6I CTCTTC 3 cut(s) 1530, 2199, 2835
BstACI GRCGYC 1 cut(s) 2714
BstAFI CTTAAG 2 cut(s) 1082, 2159
BstAPI GCANNNNNTGC 1 cut(s) 272
BstAUI TGTACA 1 cut(s) 853
BstBI TTCGAA 2 cut(s) 2153, 2201
BstC8I GCNNGC 4 cut(s) 309, 339, 1573, 2373
BstDEI CTNAG 4 cut(s) 1144, 1422, 2381, 2744
BstEII GGTNACC 1 cut(s) 1435
BstENI CCTNNNNNAGG 1 cut(s) 1871
BstF5I GGATG 8 cut(s) 99, 509, 1184, 1222, 1364, 1417, 2194, 2323
BstKTI GATC 8 cut(s) 6, 133, 286, 712, 1072, 1447, 2071, 2665
BstMAI GTCTC 5 cut(s) 357, 502, 1146, 1604, 2826
BstMBI GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
BstMWI GCNNNNNNNGC 9 cut(s) 272, 275, 980, 989, 1314, 2015, 2496, 2505, 2528
BstNI CCWGG 1 cut(s) 359
BstNSI RCATGY 1 cut(s) 2375
BstPI GGTNACC 1 cut(s) 1435
BstSCI CCNGG 2 cut(s) 357, 1330
BstSFI CTRYAG 4 cut(s) 273, 984, 2175, 2479
BstSLI GKGCMC 2 cut(s) 2464, 2598
BstV1I GCAGC 8 cut(s) 256, 259, 278, 287, 1186, 1486, 2215, 2218
BstV2I GAAGAC 3 cut(s) 679, 1017, 2457
BstX2I RGATCY 5 cut(s) 283, 1069, 1444, 2068, 2662
BstXI CCANNNNNNTGG 1 cut(s) 1326
BstYI RGATCY 5 cut(s) 283, 1069, 1444, 2068, 2662
BstZ17I GTATAC 1 cut(s) 1686
BsuI GTATCC 2 cut(s) 1627, 2080
BsuRI GGCC 9 cut(s) 80, 179, 322, 1317, 1330, 1860, 1949, 2490, 2508
BtrI CACGTC 1 cut(s) 1489
BtsCI GGATG 8 cut(s) 99, 509, 1184, 1222, 1364, 1417, 2194, 2323
BtsIMutI CAGTG 3 cut(s) 330, 1470, 1573
Cac8I GCNNGC 4 cut(s) 309, 339, 1573, 2373
CaiI CAGNNNCTG 2 cut(s) 272, 1890
Cfr13I GGNCC 9 cut(s) 178, 320, 1100, 1316, 1656, 1771, 1859, 2300, 2506
CseI GACGC 2 cut(s) 2703, 2808
Csp6I GTAC 5 cut(s) 377, 854, 1128, 1452, 2357
CviQI GTAC 5 cut(s) 377, 854, 1128, 1452, 2357
DdeI CTNAG 4 cut(s) 1144, 1422, 2381, 2744
DpnI GATC 8 cut(s) 5, 132, 285, 711, 1071, 1446, 2070, 2664
DpnII GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
DraI TTTAAA 3 cut(s) 804, 2170, 2311
EaeI YGGCCR 3 cut(s) 78, 1328, 1947
Eam1104I CTCTTC 3 cut(s) 1530, 2199, 2835
EarI CTCTTC 3 cut(s) 1530, 2199, 2835
Ecl136II GAGCTC 2 cut(s) 429, 883
Eco130I CCWWGG 1 cut(s) 1353
Eco24I GRGCYC 2 cut(s) 431, 885
Eco31I GGTCTC 1 cut(s) 357
Eco32I GATATC 1 cut(s) 1468
Eco47I GGWCC 4 cut(s) 1100, 1656, 1771, 2300
Eco53kI GAGCTC 2 cut(s) 429, 883
Eco57I CTGAAG 3 cut(s) 804, 2412, 2847
Eco91I GGTNACC 1 cut(s) 1435
EcoICRI GAGCTC 2 cut(s) 429, 883
EcoNI CCTNNNNNAGG 1 cut(s) 1871
EcoO109I RGGNCCY 3 cut(s) 1656, 1771, 2506
EcoO65I GGTNACC 1 cut(s) 1435
EcoRI GAATTC 1 cut(s) 890
EcoRII CCWGG 1 cut(s) 357
EcoRV GATATC 1 cut(s) 1468
EcoT14I CCWWGG 1 cut(s) 1353
EcoT22I ATGCAT 1 cut(s) 1744
EcoT38I GRGCYC 2 cut(s) 431, 885
ErhI CCWWGG 1 cut(s) 1353
Esp3I CGTCTC 2 cut(s) 1146, 2826
FalI AAGNNNNNCTT 6 cut(s) 504, 536, 1400, 1432, 1590, 1622
FaqI GGGAC 3 cut(s) 254, 584, 1784
FauNDI CATATG 1 cut(s) 1519
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 2 cut(s) 1685, 1722
Fnu4HI GCNGC 8 cut(s) 267, 270, 273, 276, 1175, 1500, 2229, 2232
FokI GGATG 8 cut(s) 86, 516, 1171, 1229, 1371, 1424, 2201, 2330
FriOI GRGCYC 2 cut(s) 431, 885
Fsp4HI GCNGC 8 cut(s) 267, 270, 273, 276, 1175, 1500, 2229, 2232
FspBI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1728, 2010, 2475
GluI GCNGC 8 cut(s) 267, 270, 273, 276, 1175, 1500, 2229, 2232
GsuI CTGGAG 1 cut(s) 1170
HaeIII GGCC 9 cut(s) 80, 179, 322, 1317, 1330, 1860, 1949, 2490, 2508
HapII CCGG 4 cut(s) 424, 607, 1331, 2523
HgaI GACGC 2 cut(s) 2703, 2808
Hin1I GRCGYC 1 cut(s) 2714
HpaII CCGG 4 cut(s) 424, 607, 1331, 2523
HphI GGTGA 1 cut(s) 2709
Hpy188I TCNGA 6 cut(s) 187, 443, 709, 1371, 1646, 2096
Hpy99I CGWCG 2 cut(s) 1490, 2096
HpyAV CCTTC 9 cut(s) 145, 417, 755, 1066, 1351, 1402, 2251, 2387, 2619
HpyCH4III ACNGT 7 cut(s) 800, 988, 1292, 2032, 2092, 2447, 2672
HpyCH4IV ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 2115
HpyF10VI GCNNNNNNNGC 9 cut(s) 272, 275, 980, 989, 1314, 2015, 2496, 2505, 2528
HpyF3I CTNAG 4 cut(s) 1144, 1422, 2381, 2744
HpySE526I ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 2115
Hsp92I GRCGYC 1 cut(s) 2714
Kpn2I TCCGGA 1 cut(s) 423
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
LguI GCTCTTC 3 cut(s) 1530, 2199, 2835
LmnI GCTCC 3 cut(s) 426, 434, 2351
Lsp1109I GCAGC 8 cut(s) 256, 259, 278, 287, 1186, 1486, 2215, 2218
LweI GCATC 9 cut(s) 562, 580, 934, 970, 1609, 1896, 2027, 2179, 2621
MaeI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1728, 2010, 2475
MaeII ACGT 7 cut(s) 234, 255, 864, 1014, 1155, 1488, 2115
MaeIII GTNAC 9 cut(s) 325, 558, 1435, 1940, 2000, 2053, 2386, 2441, 2715
MalI GATC 8 cut(s) 5, 132, 285, 711, 1071, 1446, 2070, 2664
MboI GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
MfeI CAATTG 1 cut(s) 2235
MflI RGATCY 5 cut(s) 283, 1069, 1444, 2068, 2662
MhlI GDGCHC 4 cut(s) 431, 885, 2464, 2598
MlsI TGGCCA 2 cut(s) 80, 1949
MluNI TGGCCA 2 cut(s) 80, 1949
MlyI GAGTC 5 cut(s) 236, 452, 561, 693, 2821
MmeI TCCRAC 4 cut(s) 1213, 1394, 2059, 2074
Mox20I TGGCCA 2 cut(s) 80, 1949
Mph1103I ATGCAT 1 cut(s) 1744
MroI TCCGGA 1 cut(s) 423
MscI TGGCCA 2 cut(s) 80, 1949
MslI CAYNNNNRTG 2 cut(s) 2591, 2617
Msp20I TGGCCA 2 cut(s) 80, 1949
MspA1I CMGCKG 1 cut(s) 269
MspCI CTTAAG 2 cut(s) 1082, 2159
MspI CCGG 4 cut(s) 424, 607, 1331, 2523
MspR9I CCNGG 2 cut(s) 359, 1332
MunI CAATTG 1 cut(s) 2235
MvaI CCWGG 1 cut(s) 359
MwoI GCNNNNNNNGC 9 cut(s) 272, 275, 980, 989, 1314, 2015, 2496, 2505, 2528
NciI CCSGG 1 cut(s) 1332
NdeI CATATG 1 cut(s) 1519
NdeII GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
NlaIV GGNNCC 5 cut(s) 1564, 1772, 1882, 2302, 2507
NmuCI GTSAC 4 cut(s) 325, 558, 2386, 2715
NsiI ATGCAT 1 cut(s) 1744
NspI RCATGY 1 cut(s) 2375
NspV TTCGAA 2 cut(s) 2153, 2201
PaeI GCATGC 1 cut(s) 2375
PciSI GCTCTTC 3 cut(s) 1530, 2199, 2835
PcsI WCGNNNNNNNCGW 2 cut(s) 2088, 2816
PflMI CCANNNNNTGG 2 cut(s) 1359, 1890
PkrI GCNGC 8 cut(s) 268, 271, 274, 277, 1176, 1501, 2230, 2233
PleI GAGTC 5 cut(s) 236, 452, 560, 692, 2820
PpsI GAGTC 5 cut(s) 236, 452, 560, 692, 2820
PpuMI RGGWCCY 2 cut(s) 1656, 1771
PshBI ATTAAT 1 cut(s) 1842
PsiI TTATAA 1 cut(s) 290
Psp124BI GAGCTC 2 cut(s) 431, 885
Psp1406I AACGTT 2 cut(s) 234, 255
Psp5II RGGWCCY 2 cut(s) 1656, 1771
Psp6I CCWGG 1 cut(s) 357
PspEI GGTNACC 1 cut(s) 1435
PspGI CCWGG 1 cut(s) 357
PspN4I GGNNCC 5 cut(s) 1564, 1772, 1882, 2302, 2507
PspPI GGNCC 9 cut(s) 178, 320, 1100, 1316, 1656, 1771, 1859, 2300, 2506
PspPPI RGGWCCY 2 cut(s) 1656, 1771
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 2 cut(s) 272, 1890
PsuI RGATCY 5 cut(s) 283, 1069, 1444, 2068, 2662
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 5 cut(s) 378, 855, 1129, 1453, 2358
RsaNI GTAC 5 cut(s) 377, 854, 1128, 1452, 2357
RseI CAYNNNNRTG 2 cut(s) 2591, 2617
SacI GAGCTC 2 cut(s) 431, 885
SapI GCTCTTC 3 cut(s) 1530, 2199, 2835
SatI GCNGC 8 cut(s) 267, 270, 273, 276, 1175, 1500, 2229, 2232
Sau3AI GATC 8 cut(s) 3, 130, 283, 709, 1069, 1444, 2068, 2662
Sau96I GGNCC 9 cut(s) 178, 320, 1100, 1316, 1656, 1771, 1859, 2300, 2506
ScaI AGTACT 1 cut(s) 1129
SchI GAGTC 5 cut(s) 236, 452, 561, 693, 2821
ScrFI CCNGG 2 cut(s) 359, 1332
SduI GDGCHC 4 cut(s) 431, 885, 2464, 2598
SfaNI GCATC 9 cut(s) 562, 580, 934, 970, 1609, 1896, 2027, 2179, 2621
SfcI CTRYAG 4 cut(s) 273, 984, 2175, 2479
SfuI TTCGAA 2 cut(s) 2153, 2201
SinI GGWCC 4 cut(s) 1100, 1656, 1771, 2300
SmiMI CAYNNNNRTG 2 cut(s) 2591, 2617
SmlI CTYRAG 8 cut(s) 465, 1082, 1113, 1607, 2128, 2159, 2455, 2492
SmoI CTYRAG 8 cut(s) 465, 1082, 1113, 1607, 2128, 2159, 2455, 2492
SphI GCATGC 1 cut(s) 2375
SsiI CCGC 2 cut(s) 1284, 1502
SspI AATATT 2 cut(s) 315, 2276
SspMI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1728, 2010, 2475
SstI GAGCTC 2 cut(s) 431, 885
StyD4I CCNGG 2 cut(s) 357, 1330
StyI CCWWGG 1 cut(s) 1353
TaaI ACNGT 7 cut(s) 800, 988, 1292, 2032, 2092, 2447, 2672
TaiI ACGT 7 cut(s) 237, 258, 867, 1017, 1158, 1491, 2118
TaqI TCGA 9 cut(s) 809, 833, 885, 1485, 1837, 2153, 2201, 2615, 2667
TatI WGTACW 2 cut(s) 853, 1127
TscAI CASTG 3 cut(s) 330, 1477, 1573
TseFI GTSAC 4 cut(s) 325, 558, 2386, 2715
TseI GCWGC 8 cut(s) 266, 269, 272, 275, 1174, 1499, 2228, 2231
Tsp45I GTSAC 4 cut(s) 325, 558, 2386, 2715
TspGWI ACGGA 2 cut(s) 1703, 2330
TspRI CASTG 3 cut(s) 330, 1477, 1573
Van91I CCANNNNNTGG 2 cut(s) 1359, 1890
Vha464I CTTAAG 2 cut(s) 1082, 2159
VneI GTGCAC 1 cut(s) 2594
VpaK11BI GGWCC 4 cut(s) 1100, 1656, 1771, 2300
VspI ATTAAT 1 cut(s) 1842
XagI CCTNNNNNAGG 1 cut(s) 1871
XapI RAATTY 4 cut(s) 642, 890, 2646, 2833
XceI RCATGY 1 cut(s) 2375
XcmI CCANNNNNNNNNTGG 1 cut(s) 836
XmiI GTMKAC 2 cut(s) 1685, 1722
XspI CTAG 8 cut(s) 219, 681, 720, 995, 1131, 1728, 2010, 2475
ZrmI AGTACT 1 cut(s) 1129
Zsp2I ATGCAT 1 cut(s) 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.