TENA/THI-4/PQQC family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g20480 |
| malus_domestica | MD05G1188600.v1.1 |
| prunus_persica | Prupe.8G215100_v2.0.a1 Prupe.8G215100_v2.0.a1 |
| pyrus_communis | pycom05g17320 |
| rosa_chinensis | RchiOBHm_Chr6g0286581 |
| rosa_laevigata | RLG00000012546 |
| rosa_multiflora | Rmu_sc0000560.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00182170 |
| rosa_rugosa | Rorug06G0181200 |
| rosa_samantha | Rh6AG294100 Rh6BG297200 Rh6CG297600 Rh6DG289500 |
| rosa_wichuraiana | Rw6G025310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1068 |
| Acc36I | ACCTGC | 2 cut(s) | 473, 1068 |
| AccI | GTMKAC | 1 cut(s) | 1392 |
| AciI | CCGC | 5 cut(s) | 74, 519, 618, 746, 979 |
| AclWI | GGATC | 9 cut(s) | 12, 75, 116, 198, 290, 303, 334, 996, 1391 |
| AcoI | YGGCCR | 2 cut(s) | 71, 376 |
| AcsI | RAATTY | 5 cut(s) | 282, 1094, 1423, 1552, 1563 |
| AcuI | CTGAAG | 1 cut(s) | 609 |
| AfaI | GTAC | 2 cut(s) | 754, 884 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 968, 1179 |
| AflII | CTTAAG | 1 cut(s) | 850 |
| AflIII | ACRYGT | 1 cut(s) | 1433 |
| AhlI | ACTAGT | 1 cut(s) | 1403 |
| AjnI | CCWGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 308, 340 |
| AloI | GAACNNNNNNTCC | 8 cut(s) | 147, 179, 234, 266, 324, 356, 577, 609 |
| Alw26I | GTCTC | 1 cut(s) | 870 |
| AlwI | GGATC | 9 cut(s) | 12, 75, 116, 198, 290, 303, 334, 996, 1391 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 587 |
| AoxI | GGCC | 3 cut(s) | 71, 376, 1265 |
| ApeKI | GCWGC | 6 cut(s) | 430, 521, 550, 896, 972, 1074 |
| ApoI | RAATTY | 5 cut(s) | 282, 1094, 1423, 1552, 1563 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 304, 336, 1178, 1210 |
| AseI | ATTAAT | 1 cut(s) | 612 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 249 |
| AspLEI | GCGC | 1 cut(s) | 1210 |
| AspS9I | GGNCC | 2 cut(s) | 1265, 1515 |
| AvaII | GGWCC | 1 cut(s) | 1515 |
| BamHI | GGATCC | 1 cut(s) | 295 |
| BbsI | GAAGAC | 2 cut(s) | 482, 1019 |
| BbvI | GCAGC | 6 cut(s) | 442, 508, 562, 883, 959, 1086 |
| BccI | CCATC | 7 cut(s) | 166, 233, 351, 505, 725, 1276, 1439 |
| BceAI | ACGGC | 3 cut(s) | 166, 495, 1402 |
| BciT130I | CCWGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| BclI | TGATCA | 1 cut(s) | 657 |
| BcoDI | GTCTC | 1 cut(s) | 870 |
| BcuI | ACTAGT | 1 cut(s) | 1403 |
| BfaI | CTAG | 4 cut(s) | 395, 773, 924, 1404 |
| BfrI | CTTAAG | 1 cut(s) | 850 |
| BfuAI | ACCTGC | 2 cut(s) | 473, 1068 |
| BglII | AGATCT | 1 cut(s) | 1111 |
| BisI | GCNGC | 7 cut(s) | 74, 431, 522, 551, 897, 973, 1075 |
| BlsI | GCNGC | 7 cut(s) | 75, 432, 523, 552, 898, 974, 1076 |
| Bme1390I | CCNGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| Bme18I | GGWCC | 1 cut(s) | 1515 |
| BmgT120I | GGNCC | 2 cut(s) | 1265, 1515 |
| BmiI | GGNNCC | 3 cut(s) | 297, 1333, 1516 |
| BmrFI | CCNGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| BmsI | GCATC | 5 cut(s) | 112, 712, 832, 846, 1323 |
| BpiI | GAAGAC | 2 cut(s) | 482, 1019 |
| BpmI | CTGGAG | 3 cut(s) | 335, 597, 1162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 294 |
| BsaJI | CCNNGG | 5 cut(s) | 32, 33, 186, 1239, 1511 |
| BsaWI | WCCGGW | 2 cut(s) | 403, 595 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 234, 264, 577, 607 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 968, 1179 |
| Bse1I | ACTGG | 1 cut(s) | 276 |
| Bse8I | GATNNNNATC | 1 cut(s) | 294 |
| BseBI | CCWGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| BseDI | CCNNGG | 5 cut(s) | 32, 33, 186, 1239, 1511 |
| BseGI | GGATG | 7 cut(s) | 158, 412, 497, 727, 847, 861, 1381 |
| BseJI | GATNNNNATC | 1 cut(s) | 294 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 968, 1179 |
| BseMII | CTCAG | 3 cut(s) | 187, 666, 1544 |
| BseNI | ACTGG | 1 cut(s) | 276 |
| BseX3I | CGGCCG | 1 cut(s) | 71 |
| BseXI | GCAGC | 6 cut(s) | 442, 508, 562, 883, 959, 1086 |
| BseYI | CCCAGC | 1 cut(s) | 892 |
| BsgI | GTGCAG | 2 cut(s) | 45, 882 |
| Bsh1285I | CGRYCG | 2 cut(s) | 74, 404 |
| BshFI | GGCC | 3 cut(s) | 73, 378, 1267 |
| BsiEI | CGRYCG | 2 cut(s) | 74, 404 |
| BsiSI | CCGG | 3 cut(s) | 379, 404, 596 |
| BslFI | GGGAC | 2 cut(s) | 552, 685 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 968, 1179 |
| BsmAI | GTCTC | 1 cut(s) | 870 |
| BsmBI | CGTCTC | 1 cut(s) | 870 |
| BsmFI | GGGAC | 2 cut(s) | 552, 685 |
| BsnI | GGCC | 3 cut(s) | 73, 378, 1267 |
| BspACI | CCGC | 5 cut(s) | 74, 519, 618, 746, 979 |
| BspANI | GGCC | 3 cut(s) | 73, 378, 1267 |
| BspCNI | CTCAG | 3 cut(s) | 186, 667, 1543 |
| BspHI | TCATGA | 2 cut(s) | 1123, 1453 |
| BspLI | GGNNCC | 3 cut(s) | 297, 1333, 1516 |
| BspMI | ACCTGC | 2 cut(s) | 473, 1068 |
| BspPI | GGATC | 9 cut(s) | 12, 75, 116, 198, 290, 303, 334, 996, 1391 |
| BspTI | CTTAAG | 1 cut(s) | 850 |
| BsrI | ACTGG | 1 cut(s) | 276 |
| BssECI | CCNNGG | 5 cut(s) | 32, 33, 186, 1239, 1511 |
| Bst2UI | CCWGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| Bst4CI | ACNGT | 5 cut(s) | 543, 1055, 1136, 1261, 1339 |
| Bst6I | CTCTTC | 1 cut(s) | 711 |
| BstAFI | CTTAAG | 1 cut(s) | 850 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1080 |
| BstC8I | GCNNGC | 4 cut(s) | 61, 179, 970, 977 |
| BstDEI | CTNAG | 3 cut(s) | 173, 675, 1530 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1177 |
| BstF5I | GGATG | 7 cut(s) | 158, 412, 497, 727, 847, 861, 1381 |
| BstHHI | GCGC | 1 cut(s) | 1210 |
| BstMAI | GTCTC | 1 cut(s) | 870 |
| BstMCI | CGRYCG | 2 cut(s) | 74, 404 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 902, 1080 |
| BstNI | CCWGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| BstNSI | RCATGY | 1 cut(s) | 1437 |
| BstSCI | CCNGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| BstV1I | GCAGC | 6 cut(s) | 442, 508, 562, 883, 959, 1086 |
| BstV2I | GAAGAC | 2 cut(s) | 482, 1019 |
| BstX2I | RGATCY | 4 cut(s) | 121, 295, 339, 1111 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1240 |
| BstYI | RGATCY | 4 cut(s) | 121, 295, 339, 1111 |
| BstZI | CGGCCG | 1 cut(s) | 71 |
| BsuRI | GGCC | 3 cut(s) | 73, 378, 1267 |
| BtsCI | GGATG | 7 cut(s) | 158, 412, 497, 727, 847, 861, 1381 |
| BtsI | GCAGTG | 1 cut(s) | 1357 |
| BtsIMutI | CAGTG | 4 cut(s) | 1051, 1132, 1335, 1357 |
| BveI | ACCTGC | 2 cut(s) | 473, 1068 |
| Cac8I | GCNNGC | 4 cut(s) | 61, 179, 970, 977 |
| CaiI | CAGNNNCTG | 1 cut(s) | 587 |
| CciI | TCATGA | 2 cut(s) | 1123, 1453 |
| CfoI | GCGC | 1 cut(s) | 1210 |
| Cfr13I | GGNCC | 2 cut(s) | 1265, 1515 |
| Csp6I | GTAC | 2 cut(s) | 753, 883 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 95, 130 |
| CviQI | GTAC | 2 cut(s) | 753, 883 |
| DdeI | CTNAG | 3 cut(s) | 173, 675, 1530 |
| EaeI | YGGCCR | 2 cut(s) | 71, 376 |
| EagI | CGGCCG | 1 cut(s) | 71 |
| Eam1104I | CTCTTC | 1 cut(s) | 711 |
| EarI | CTCTTC | 1 cut(s) | 711 |
| EciI | GGCGGA | 1 cut(s) | 735 |
| EclXI | CGGCCG | 1 cut(s) | 71 |
| Eco47I | GGWCC | 1 cut(s) | 1515 |
| Eco52I | CGGCCG | 1 cut(s) | 71 |
| Eco57I | CTGAAG | 1 cut(s) | 609 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1177 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1515 |
| EcoRII | CCWGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| Esp3I | CGTCTC | 1 cut(s) | 870 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 774, 806, 1054, 1086, 1176, 1208 |
| FaqI | GGGAC | 2 cut(s) | 552, 685 |
| FbaI | TGATCA | 1 cut(s) | 657 |
| FblI | GTMKAC | 1 cut(s) | 1392 |
| Fnu4HI | GCNGC | 7 cut(s) | 74, 431, 522, 551, 897, 973, 1075 |
| FokI | GGATG | 7 cut(s) | 145, 419, 484, 734, 854, 868, 1388 |
| Fsp4HI | GCNGC | 7 cut(s) | 74, 431, 522, 551, 897, 973, 1075 |
| FspBI | CTAG | 4 cut(s) | 395, 773, 924, 1404 |
| GlaI | GCGC | 1 cut(s) | 1209 |
| GluI | GCNGC | 7 cut(s) | 74, 431, 522, 551, 897, 973, 1075 |
| GsaI | CCCAGC | 1 cut(s) | 896 |
| GsuI | CTGGAG | 3 cut(s) | 335, 597, 1162 |
| HaeIII | GGCC | 3 cut(s) | 73, 378, 1267 |
| HapII | CCGG | 3 cut(s) | 379, 404, 596 |
| HhaI | GCGC | 1 cut(s) | 1210 |
| Hin6I | GCGC | 1 cut(s) | 1208 |
| HinP1I | GCGC | 1 cut(s) | 1208 |
| HincII | GTYRAC | 2 cut(s) | 312, 1393 |
| HindII | GTYRAC | 2 cut(s) | 312, 1393 |
| HindIII | AAGCTT | 1 cut(s) | 1190 |
| HinfI | GANTC | 5 cut(s) | 704, 831, 920, 1481, 1547 |
| HpaII | CCGG | 3 cut(s) | 379, 404, 596 |
| Hpy166II | GTNNAC | 3 cut(s) | 95, 312, 1393 |
| Hpy188III | TCNNGA | 6 cut(s) | 166, 287, 576, 835, 1124, 1454 |
| Hpy8I | GTNNAC | 3 cut(s) | 95, 312, 1393 |
| Hpy99I | CGWCG | 1 cut(s) | 1397 |
| HpyAV | CCTTC | 4 cut(s) | 172, 752, 1183, 1277 |
| HpyCH4III | ACNGT | 5 cut(s) | 543, 1055, 1136, 1261, 1339 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 902, 1080 |
| HpyF3I | CTNAG | 3 cut(s) | 173, 675, 1530 |
| HspAI | GCGC | 1 cut(s) | 1208 |
| Ksp22I | TGATCA | 1 cut(s) | 657 |
| LmnI | GCTCC | 4 cut(s) | 354, 578, 598, 1337 |
| Lsp1109I | GCAGC | 6 cut(s) | 442, 508, 562, 883, 959, 1086 |
| LweI | GCATC | 5 cut(s) | 112, 712, 832, 846, 1323 |
| MaeI | CTAG | 4 cut(s) | 395, 773, 924, 1404 |
| MaeIII | GTNAC | 3 cut(s) | 1055, 1064, 1220 |
| MfeI | CAATTG | 2 cut(s) | 231, 467 |
| MflI | RGATCY | 4 cut(s) | 121, 295, 339, 1111 |
| MlyI | GAGTC | 1 cut(s) | 1556 |
| MmeI | TCCRAC | 1 cut(s) | 240 |
| MnlI | CCTC | 8 cut(s) | 136, 141, 181, 377, 712, 831, 860, 1473 |
| MroXI | GAANNNNTTC | 1 cut(s) | 249 |
| MseI | TTAA | 5 cut(s) | 47, 504, 600, 612, 851 |
| MslI | CAYNNNNRTG | 1 cut(s) | 810 |
| MspA1I | CMGCKG | 2 cut(s) | 521, 896 |
| MspCI | CTTAAG | 1 cut(s) | 850 |
| MspI | CCGG | 3 cut(s) | 379, 404, 596 |
| MspR9I | CCNGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| MunI | CAATTG | 2 cut(s) | 231, 467 |
| MvaI | CCWGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 902, 1080 |
| NlaIV | GGNNCC | 3 cut(s) | 297, 1333, 1516 |
| NmuCI | GTSAC | 2 cut(s) | 1055, 1220 |
| NspI | RCATGY | 1 cut(s) | 1437 |
| PagI | TCATGA | 2 cut(s) | 1123, 1453 |
| PaqCI | CACCTGC | 1 cut(s) | 1068 |
| PasI | CCCWGGG | 1 cut(s) | 33 |
| PciI | ACATGT | 1 cut(s) | 1433 |
| PdmI | GAANNNNTTC | 1 cut(s) | 249 |
| PfeI | GAWTC | 4 cut(s) | 704, 831, 920, 1481 |
| PfoI | TCCNGGA | 3 cut(s) | 327, 351, 1178 |
| PkrI | GCNGC | 7 cut(s) | 75, 432, 523, 552, 898, 974, 1076 |
| PleI | GAGTC | 1 cut(s) | 1555 |
| PpsI | GAGTC | 1 cut(s) | 1555 |
| PpuMI | RGGWCCY | 1 cut(s) | 1515 |
| PscI | ACATGT | 1 cut(s) | 1433 |
| PshBI | ATTAAT | 1 cut(s) | 612 |
| Psp5II | RGGWCCY | 1 cut(s) | 1515 |
| Psp6I | CCWGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| PspFI | CCCAGC | 1 cut(s) | 892 |
| PspGI | CCWGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| PspN4I | GGNNCC | 3 cut(s) | 297, 1333, 1516 |
| PspPI | GGNCC | 2 cut(s) | 1265, 1515 |
| PspPPI | RGGWCCY | 1 cut(s) | 1515 |
| PstNI | CAGNNNCTG | 1 cut(s) | 587 |
| PsuI | RGATCY | 4 cut(s) | 121, 295, 339, 1111 |
| PvuII | CAGCTG | 1 cut(s) | 896 |
| RsaI | GTAC | 2 cut(s) | 754, 884 |
| RsaNI | GTAC | 2 cut(s) | 753, 883 |
| RseI | CAYNNNNRTG | 1 cut(s) | 810 |
| SalI | GTCGAC | 1 cut(s) | 1391 |
| SaqAI | TTAA | 5 cut(s) | 47, 504, 600, 612, 851 |
| SatI | GCNGC | 7 cut(s) | 74, 431, 522, 551, 897, 973, 1075 |
| Sau96I | GGNCC | 2 cut(s) | 1265, 1515 |
| SchI | GAGTC | 1 cut(s) | 1556 |
| ScrFI | CCNGG | 7 cut(s) | 34, 329, 353, 750, 1180, 1241, 1512 |
| SfaNI | GCATC | 5 cut(s) | 112, 712, 832, 846, 1323 |
| SinI | GGWCC | 1 cut(s) | 1515 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 810 |
| SmlI | CTYRAG | 1 cut(s) | 850 |
| SmoI | CTYRAG | 1 cut(s) | 850 |
| SpeI | ACTAGT | 1 cut(s) | 1403 |
| SsiI | CCGC | 5 cut(s) | 74, 519, 618, 746, 979 |
| SspI | AATATT | 1 cut(s) | 1369 |
| SspMI | CTAG | 4 cut(s) | 395, 773, 924, 1404 |
| StyD4I | CCNGG | 7 cut(s) | 32, 327, 351, 748, 1178, 1239, 1510 |
| TaaI | ACNGT | 5 cut(s) | 543, 1055, 1136, 1261, 1339 |
| TaqI | TCGA | 2 cut(s) | 1392, 1465 |
| TatI | WGTACW | 1 cut(s) | 882 |
| TauI | GCSGC | 1 cut(s) | 76 |
| TfiI | GAWTC | 4 cut(s) | 704, 831, 920, 1481 |
| Tru1I | TTAA | 5 cut(s) | 47, 504, 600, 612, 851 |
| Tru9I | TTAA | 5 cut(s) | 47, 504, 600, 612, 851 |
| TscAI | CASTG | 4 cut(s) | 1058, 1139, 1342, 1357 |
| TseFI | GTSAC | 2 cut(s) | 1055, 1220 |
| TseI | GCWGC | 6 cut(s) | 430, 521, 550, 896, 972, 1074 |
| Tsp45I | GTSAC | 2 cut(s) | 1055, 1220 |
| TspDTI | ATGAA | 8 cut(s) | 272, 552, 717, 729, 774, 945, 1442, 1482 |
| TspGWI | ACGGA | 3 cut(s) | 490, 1090, 1317 |
| TspRI | CASTG | 4 cut(s) | 1058, 1139, 1342, 1357 |
| Vha464I | CTTAAG | 1 cut(s) | 850 |
| VpaK11BI | GGWCC | 1 cut(s) | 1515 |
| VspI | ATTAAT | 1 cut(s) | 612 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1177 |
| XapI | RAATTY | 5 cut(s) | 282, 1094, 1423, 1552, 1563 |
| XceI | RCATGY | 1 cut(s) | 1437 |
| XmiI | GTMKAC | 1 cut(s) | 1392 |
| XmnI | GAANNNNTTC | 1 cut(s) | 249 |
| XspI | CTAG | 4 cut(s) | 395, 773, 924, 1404 |