Rorug06G0312700
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
46424687 .. 46426196
1510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0312700.1

Sequence Viewer

Length: 1434 bp
ATGTTTCTCGAGCTGTTAGCCTTCTCCCCCTTTCTCCTCCTCCCCTTGCTTTTCTTCATCCTCAGGCTTTTCGGCAACTCGAAAACCAACGGCAACAGCAAGCTCCCCAAATCATACCCAATAATCGGTTCTTTCCCAGCCCTCTACAAGAACTATGCCAATAGACTCCCATGGTTCACTGAGCTTCTCCAAGACTCGCCCACATCTACTATTACCATGCACCATTCTCTGGGCCGCCACTTCGTCATCACCGCCAACCTGACTGTGGTCCAACACATCCTCAAGACAAAGTTTCACATCTACCAAAAGGGCGAGTCCTTCAGTACAACTCTCCACGACCTCTTCGGCGACGGCTTTTTCACCGCCGACGGTGACAATTGGAAGTTCCAGCGGCAGCTCTCCAGCCACGAATTCAACACAAAGTCGCTCAGGAAATTCGTGGAAGAGGTGGTGGACACTGAGCTGTACAATCGGCTGATTCCCATTCTATCCATATCTTCCAGCCAGCGAACCGTTCTCGATTTCCAAGACATTCTCCAGCGGTTTGCCTTCGACAACATTTGCCGGATCGGGTTCGGTTACGACCCAGAGTATCTCCTTCCTTCTCTGCCGCAAGCTAAATTCGCGGTAGCGTTCGACGATGCGGTCCAGATCAGCGAAGAAAGGTTCAATTCCATGCGCCCGTTTGCGAGCACCATCGTCAGGAAAAAGAAGCGCGAACTAGACGAGAAGAAGACTCTAGAGTCTCACGATTTGTTGTCTCGGTTCTTGAACTCCGGCCACTCCGATGAGAAATTTGTCACCGACATTGTCATCAGCTTCATCCTCGCCGGAAAGGATACGACCTCGGCAGCTCTGACTTGGTTCTTCTGGCTAATCTCAAACCACCCCAACGTCGAAAGCCAAATTCTCAAGGAGATCAATGAGAAAACGGAGAGCGAAGCTGGATATGACGAAGCCAAGGACATGGTGTACACACAAGCGGCGCTCTGCGAGAGCATGAGGCTGTACCCTCCGGTTCCGAGGGACATCAAAGAGGCAGTAGACGACGACGTTTTGCCCGACGGGACTAAAGTGAAGAAGGGGATGACAGTGGTTTACCACATGTACGCAATGGGGAGGATGGAGCAGATATGGGGTAAGGATTGGGCCGAGTTCCGACCCGAGAAGTGGTTGGAGCGTGACATGGCGACGGAGAACTGGCGGTTCGTGGCGAAGGACTCGTTTAGCTACCCGGTGTTTCAGGCGGGGCCGAGGATCTGTTTGGGGAAGGAGATGGCGTTTTTGCAGATGAAAAGGGTGGTGGGTGAGGTTTTGAAGAGGTTTAAGGTTGTACCGGAGAAGAGGGAGAATGGGAAGGAGACGGATATGCTTACCTACCTTACCGTAAAAATGAAAGGTGGGTTTCCGGTGACCGTTGTGGAGAGGGCTTGA

Protein Analysis

477

Amino Acids

55.08

Weight (kDa)

7.19

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 195 1.1e-10 Cytochrome P450
p450 PF00067 227 - 458 1.4e-43 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011663)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 644, 742
AccB7I CCANNNNNTGG 1 cut(s) 229
AccI GTMKAC 1 cut(s) 1044
AccII CGCG 2 cut(s) 626, 717
AclWI GGATC 2 cut(s) 575, 1265
AcoI YGGCCR 1 cut(s) 778
AcsI RAATTY 5 cut(s) 410, 434, 620, 794, 906
AcuI CTGAAG 1 cut(s) 304
AfaI GTAC 6 cut(s) 325, 467, 974, 1010, 1109, 1335
AfiI CCNNNNNNNGG 5 cut(s) 125, 229, 265, 702, 1170
AflIII ACRYGT 1 cut(s) 1104
AgsI TTSAA 4 cut(s) 415, 670, 772, 1318
AjuI GAANNNNNNNTTGG 2 cut(s) 112, 144
Alw21I GWGCWC 1 cut(s) 695
Alw26I GTCTC 3 cut(s) 750, 765, 1355
AlwI GGATC 2 cut(s) 575, 1265
Ama87I CYCGRG 2 cut(s) 8, 1163
AoxI GGCC 4 cut(s) 232, 778, 1149, 1250
ApeKI GCWGC 2 cut(s) 394, 851
ApoI RAATTY 5 cut(s) 410, 434, 620, 794, 906
AspLEI GCGC 3 cut(s) 681, 717, 988
AspS9I GGNCC 5 cut(s) 232, 268, 646, 1149, 1250
AsuC2I CCSGG 1 cut(s) 1235
AsuHPI GGTGA 6 cut(s) 241, 352, 383, 793, 1319, 1423
AvaI CYCGRG 2 cut(s) 8, 1163
AvaII GGWCC 2 cut(s) 268, 646
AxyI CCTNAGG 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 695
BbvI GCAGC 2 cut(s) 406, 863
BccI CCATC 3 cut(s) 704, 1117, 1270
BceAI ACGGC 2 cut(s) 106, 367
BciVI GTATCC 1 cut(s) 832
BcnI CCSGG 1 cut(s) 1235
BcoDI GTCTC 3 cut(s) 750, 765, 1355
BfaI CTAG 2 cut(s) 722, 740
BfoI RGCGCY 1 cut(s) 989
BfuI GTATCC 1 cut(s) 832
BisI GCNGC 6 cut(s) 235, 392, 395, 611, 852, 984
BlsI GCNGC 6 cut(s) 236, 393, 396, 612, 853, 985
Bme1390I CCNGG 1 cut(s) 1235
Bme18I GGWCC 2 cut(s) 268, 646
BmeT110I CYCGRG 2 cut(s) 8, 1163
BmgT120I GGNCC 5 cut(s) 232, 268, 646, 1149, 1250
BmiI GGNNCC 2 cut(s) 1020, 1251
BmrFI CCNGG 1 cut(s) 1235
BmsI GCATC 1 cut(s) 631
BoxI GACNNNNGTC 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 740
BpmI CTGGAG 2 cut(s) 385, 521
Bpu10I CCTNAGC 1 cut(s) 428
BpuEI CTTGAG 2 cut(s) 266, 896
BpuMI CCSGG 1 cut(s) 1235
BsaJI CCNNGG 5 cut(s) 170, 846, 960, 1022, 1253
BsaWI WCCGGW 3 cut(s) 1015, 1336, 1408
BsaXI ACNNNNNCTCC 2 cut(s) 1265, 1295
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 229, 265, 702, 1170
Bse1I ACTGG 1 cut(s) 1205
Bse21I CCTNAGG 1 cut(s) 62
Bse3DI GCAATG 1 cut(s) 1119
BseDI CCNNGG 5 cut(s) 170, 846, 960, 1022, 1253
BseGI GGATG 5 cut(s) 57, 276, 822, 1092, 1128
BseLI CCNNNNNNNGG 5 cut(s) 125, 229, 265, 702, 1170
BseMI GCAATG 1 cut(s) 1119
BseMII CTCAG 4 cut(s) 76, 171, 442, 450
BseNI ACTGG 1 cut(s) 1205
BseRI GAGGAG 2 cut(s) 26, 29
BseXI GCAGC 2 cut(s) 406, 863
BseYI CCCAGC 1 cut(s) 136
Bsh1236I CGCG 2 cut(s) 626, 717
BshFI GGCC 4 cut(s) 234, 780, 1151, 1252
BsiHKAI GWGCWC 1 cut(s) 695
BsiHKCI CYCGRG 2 cut(s) 8, 1163
BsiSI CCGG 7 cut(s) 565, 777, 831, 1016, 1235, 1337, 1409
BslFI GGGAC 2 cut(s) 1040, 1081
BslI CCNNNNNNNGG 5 cut(s) 125, 229, 265, 702, 1170
BsmAI GTCTC 3 cut(s) 750, 765, 1355
BsmBI CGTCTC 1 cut(s) 1355
BsmFI GGGAC 2 cut(s) 1040, 1081
BsnI GGCC 4 cut(s) 234, 780, 1151, 1252
BsoBI CYCGRG 2 cut(s) 8, 1163
Bsp1286I GDGCHC 1 cut(s) 695
Bsp1407I TGTACA 2 cut(s) 465, 972
Bsp143I GATC 4 cut(s) 567, 651, 918, 1257
Bsp19I CCATGG 1 cut(s) 170
BspANI GGCC 4 cut(s) 234, 780, 1151, 1252
BspCNI CTCAG 4 cut(s) 75, 172, 441, 451
BspFNI CGCG 2 cut(s) 626, 717
BspLI GGNNCC 2 cut(s) 1020, 1251
BspPI GGATC 2 cut(s) 575, 1265
BsrDI GCAATG 1 cut(s) 1119
BsrGI TGTACA 2 cut(s) 465, 972
BsrI ACTGG 1 cut(s) 1205
BssECI CCNNGG 5 cut(s) 170, 846, 960, 1022, 1253
BssMI GATC 4 cut(s) 567, 651, 918, 1257
BssT1I CCWWGG 2 cut(s) 170, 960
Bst4CI ACNGT 6 cut(s) 265, 371, 514, 1093, 1387, 1417
Bst6I CTCTTC 4 cut(s) 347, 438, 1313, 1337
BstAUI TGTACA 2 cut(s) 465, 972
BstC8I GCNNGC 4 cut(s) 101, 506, 615, 691
BstDEI CTNAG 4 cut(s) 62, 180, 428, 459
BstDSI CCRYGG 1 cut(s) 170
BstEII GGTNACC 1 cut(s) 1411
BstF5I GGATG 5 cut(s) 57, 276, 822, 1092, 1128
BstFNI CGCG 2 cut(s) 626, 717
BstH2I RGCGCY 1 cut(s) 989
BstHHI GCGC 3 cut(s) 681, 717, 988
BstKTI GATC 4 cut(s) 570, 654, 921, 1260
BstMAI GTCTC 3 cut(s) 750, 765, 1355
BstMBI GATC 4 cut(s) 567, 651, 918, 1257
BstMWI GCNNNNNNNGC 1 cut(s) 623
BstNSI RCATGY 1 cut(s) 1108
BstPAI GACNNNNGTC 1 cut(s) 266
BstPI GGTNACC 1 cut(s) 1411
BstSCI CCNGG 1 cut(s) 1233
BstUI CGCG 2 cut(s) 626, 717
BstV1I GCAGC 2 cut(s) 406, 863
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 1 cut(s) 1257
BstXI CCANNNNNNTGG 1 cut(s) 967
BstYI RGATCY 1 cut(s) 1257
Bsu36I CCTNAGG 1 cut(s) 62
BsuI GTATCC 1 cut(s) 832
BsuRI GGCC 4 cut(s) 234, 780, 1151, 1252
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 5 cut(s) 57, 276, 822, 1092, 1128
BtsIMutI CAGTG 3 cut(s) 177, 456, 1098
Cac8I GCNNGC 4 cut(s) 101, 506, 615, 691
CfoI GCGC 3 cut(s) 681, 717, 988
Cfr13I GGNCC 5 cut(s) 232, 268, 646, 1149, 1250
Csp6I GTAC 6 cut(s) 324, 466, 973, 1009, 1108, 1334
CviAII CATG 7 cut(s) 171, 217, 676, 967, 1000, 1105, 1186
CviQI GTAC 6 cut(s) 324, 466, 973, 1009, 1108, 1334
DdeI CTNAG 4 cut(s) 62, 180, 428, 459
DpnI GATC 4 cut(s) 569, 653, 920, 1259
DpnII GATC 4 cut(s) 567, 651, 918, 1257
DrdI GACNNNNNNGTC 2 cut(s) 644, 742
DseDI GACNNNNNNGTC 2 cut(s) 644, 742
EaeI YGGCCR 1 cut(s) 778
Eam1104I CTCTTC 4 cut(s) 347, 438, 1313, 1337
EarI CTCTTC 4 cut(s) 347, 438, 1313, 1337
Eco130I CCWWGG 2 cut(s) 170, 960
Eco47I GGWCC 2 cut(s) 268, 646
Eco57I CTGAAG 1 cut(s) 304
Eco81I CCTNAGG 1 cut(s) 62
Eco88I CYCGRG 2 cut(s) 8, 1163
Eco91I GGTNACC 1 cut(s) 1411
EcoO65I GGTNACC 1 cut(s) 1411
EcoRI GAATTC 1 cut(s) 410
EcoT14I CCWWGG 2 cut(s) 170, 960
ErhI CCWWGG 2 cut(s) 170, 960
Esp3I CGTCTC 1 cut(s) 1355
FaeI CATG 7 cut(s) 174, 220, 679, 970, 1003, 1108, 1189
FaqI GGGAC 2 cut(s) 1040, 1081
FatI CATG 7 cut(s) 170, 216, 675, 966, 999, 1104, 1185
FauI CCCGC 1 cut(s) 1240
FblI GTMKAC 1 cut(s) 1044
Fnu4HI GCNGC 6 cut(s) 235, 392, 395, 611, 852, 984
FokI GGATG 5 cut(s) 44, 263, 809, 1099, 1135
Fsp4HI GCNGC 6 cut(s) 235, 392, 395, 611, 852, 984
FspBI CTAG 2 cut(s) 722, 740
GlaI GCGC 3 cut(s) 680, 716, 987
GluI GCNGC 6 cut(s) 235, 392, 395, 611, 852, 984
GsaI CCCAGC 1 cut(s) 140
GsuI CTGGAG 2 cut(s) 385, 521
HaeII RGCGCY 1 cut(s) 989
HaeIII GGCC 4 cut(s) 234, 780, 1151, 1252
HapII CCGG 7 cut(s) 565, 777, 831, 1016, 1235, 1337, 1409
HhaI GCGC 3 cut(s) 681, 717, 988
Hin1II CATG 7 cut(s) 174, 220, 679, 970, 1003, 1108, 1189
Hin6I GCGC 3 cut(s) 679, 715, 986
HinP1I GCGC 3 cut(s) 679, 715, 986
HinfI GANTC 7 cut(s) 165, 194, 314, 478, 736, 743, 1220
HpaII CCGG 7 cut(s) 565, 777, 831, 1016, 1235, 1337, 1409
HphI GGTGA 6 cut(s) 241, 352, 383, 793, 1319, 1423
Hpy166II GTNNAC 6 cut(s) 177, 454, 973, 975, 1045, 1099
Hpy188I TCNGA 4 cut(s) 787, 858, 1023, 1160
Hpy188III TCNNGA 9 cut(s) 8, 283, 430, 518, 649, 703, 740, 749, 769
Hpy8I GTNNAC 6 cut(s) 177, 454, 973, 975, 1045, 1099
Hpy99I CGWCG 8 cut(s) 353, 371, 641, 899, 1052, 1055, 1067, 1195
HpyAV CCTTC 9 cut(s) 31, 328, 559, 608, 612, 1075, 1210, 1264, 1351
HpyCH4III ACNGT 6 cut(s) 265, 371, 514, 1093, 1387, 1417
HpyCH4IV ACGT 2 cut(s) 894, 1053
HpyCH4V TGCA 2 cut(s) 220, 1288
HpyF10VI GCNNNNNNNGC 1 cut(s) 623
HpyF3I CTNAG 4 cut(s) 62, 180, 428, 459
HpySE526I ACGT 2 cut(s) 894, 1053
Hsp92II CATG 7 cut(s) 174, 220, 679, 970, 1003, 1108, 1189
HspAI GCGC 3 cut(s) 679, 715, 986
Kzo9I GATC 4 cut(s) 567, 651, 918, 1257
LmnI GCTCC 3 cut(s) 108, 1126, 1177
Lsp1109I GCAGC 2 cut(s) 406, 863
LweI GCATC 1 cut(s) 631
MaeI CTAG 2 cut(s) 722, 740
MaeII ACGT 2 cut(s) 894, 1053
MaeIII GTNAC 5 cut(s) 371, 578, 799, 1181, 1411
MalI GATC 4 cut(s) 569, 653, 920, 1259
MboI GATC 4 cut(s) 567, 651, 918, 1257
MfeI CAATTG 1 cut(s) 376
MflI RGATCY 1 cut(s) 1257
MhlI GDGCHC 1 cut(s) 695
MluCI AATT 7 cut(s) 376, 410, 434, 620, 670, 794, 906
MlyI GAGTC 6 cut(s) 159, 188, 323, 730, 752, 1214
MmeI TCCRAC 3 cut(s) 295, 1155, 1183
MseI TTAA 1 cut(s) 1326
MslI CAYNNNNRTG 1 cut(s) 786
MspA1I CMGCKG 2 cut(s) 391, 541
MspI CCGG 7 cut(s) 565, 777, 831, 1016, 1235, 1337, 1409
MspR9I CCNGG 1 cut(s) 1235
MunI CAATTG 1 cut(s) 376
MvnI CGCG 2 cut(s) 626, 717
MwoI GCNNNNNNNGC 1 cut(s) 623
NciI CCSGG 1 cut(s) 1235
NcoI CCATGG 1 cut(s) 170
NdeII GATC 4 cut(s) 567, 651, 918, 1257
NlaIII CATG 7 cut(s) 174, 220, 679, 970, 1003, 1108, 1189
NlaIV GGNNCC 2 cut(s) 1020, 1251
NmeAIII GCCGAG 3 cut(s) 827, 1177, 1278
NmuCI GTSAC 4 cut(s) 371, 799, 1181, 1411
NspI RCATGY 1 cut(s) 1108
PaeR7I CTCGAG 1 cut(s) 8
PciI ACATGT 1 cut(s) 1104
PcsI WCGNNNNNNNCGW 1 cut(s) 1059
PfeI GAWTC 1 cut(s) 478
PflFI GACNNNGTC 1 cut(s) 809
PflMI CCANNNNNTGG 1 cut(s) 229
PkrI GCNGC 6 cut(s) 236, 393, 396, 612, 853, 985
PleI GAGTC 6 cut(s) 159, 188, 322, 730, 751, 1214
PpsI GAGTC 6 cut(s) 159, 188, 322, 730, 751, 1214
PscI ACATGT 1 cut(s) 1104
PshAI GACNNNNGTC 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 1411
PspFI CCCAGC 1 cut(s) 136
PspN4I GGNNCC 2 cut(s) 1020, 1251
PspPI GGNCC 5 cut(s) 232, 268, 646, 1149, 1250
PsuI RGATCY 1 cut(s) 1257
PsyI GACNNNGTC 1 cut(s) 809
RsaI GTAC 6 cut(s) 325, 467, 974, 1010, 1109, 1335
RsaNI GTAC 6 cut(s) 324, 466, 973, 1009, 1108, 1334
RseI CAYNNNNRTG 1 cut(s) 786
SaqAI TTAA 1 cut(s) 1326
SatI GCNGC 6 cut(s) 235, 392, 395, 611, 852, 984
Sau3AI GATC 4 cut(s) 567, 651, 918, 1257
Sau96I GGNCC 5 cut(s) 232, 268, 646, 1149, 1250
SchI GAGTC 6 cut(s) 159, 188, 323, 730, 752, 1214
ScrFI CCNGG 1 cut(s) 1235
SduI GDGCHC 1 cut(s) 695
SfaNI GCATC 1 cut(s) 631
Sfr274I CTCGAG 1 cut(s) 8
SinI GGWCC 2 cut(s) 268, 646
SlaI CTCGAG 1 cut(s) 8
SmiMI CAYNNNNRTG 1 cut(s) 786
SmlI CTYRAG 3 cut(s) 8, 281, 911
SmoI CTYRAG 3 cut(s) 8, 281, 911
Sse9I AATT 7 cut(s) 376, 410, 434, 620, 670, 794, 906
SspMI CTAG 2 cut(s) 722, 740
StyD4I CCNGG 1 cut(s) 1233
StyI CCWWGG 2 cut(s) 170, 960
TaaI ACNGT 6 cut(s) 265, 371, 514, 1093, 1387, 1417
TaiI ACGT 2 cut(s) 897, 1056
TaqI TCGA 6 cut(s) 9, 80, 519, 552, 636, 897
TasI AATT 7 cut(s) 376, 410, 434, 620, 670, 794, 906
TatI WGTACW 3 cut(s) 323, 465, 972
TauI GCSGC 4 cut(s) 237, 394, 613, 986
TfiI GAWTC 1 cut(s) 478
Tru1I TTAA 1 cut(s) 1326
Tru9I TTAA 1 cut(s) 1326
TscAI CASTG 3 cut(s) 184, 463, 1098
TseFI GTSAC 4 cut(s) 371, 799, 1181, 1411
TseI GCWGC 2 cut(s) 394, 851
Tsp45I GTSAC 4 cut(s) 371, 799, 1181, 1411
TspDTI ATGAA 4 cut(s) 46, 811, 1307, 1409
TspGWI ACGGA 3 cut(s) 947, 1208, 1379
TspRI CASTG 3 cut(s) 184, 463, 1098
Tth111I GACNNNGTC 1 cut(s) 809
Van91I CCANNNNNTGG 1 cut(s) 229
VpaK11BI GGWCC 2 cut(s) 268, 646
XapI RAATTY 5 cut(s) 410, 434, 620, 794, 906
XbaI TCTAGA 1 cut(s) 739
XceI RCATGY 1 cut(s) 1108
XcmI CCANNNNNNNNNTGG 1 cut(s) 262
XhoI CTCGAG 1 cut(s) 8
XmiI GTMKAC 1 cut(s) 1044
XspI CTAG 2 cut(s) 722, 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.