Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006801

Physical Location & Seq

Genomic Coordinates Reverse (-)

50014869 .. 50017483

Gene Structure 2615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0351000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGAACAAGACTACCGCGGCTCCAGAAAACGCAGGAGACAAGACGGCAACGTCGATGACCTCACCAAGGCATTCAATTTCAACAATGGCGATGGCCTTGGTCTCACTGCTGGAATCGGGATGAAGATGCTGAAGAACATGGGCTACAAAGGAGGCGGTCTTGGCAAGGACGAACAGGGAATGCTCAACCCCATTCAACCCAAATTGAGGCCAAAGAATTTGGGCATGGGCTTCAACGACACCAAAACCAAGCTGCCCAATTTGCAAGAAGAATCGGAGGCTGATGTTCCTCCGCCCACCACCACCACCACCATGCCAACTTGGAAGAAGAACGTAATTAACAAGCAGCAGAAGGATTTCTGTTTGGCAGAGTTCTTGGCCCAGAAGATGGAAGAGGAACAGAATGTTGAGGCCGTCGAAAATTCGGAGAATTTGAATGCGCAGGAGGAAGATGGTGATGATGTTCCGATGCCCAATTTGAACAATGAGATCAGTGCTGTTTTGAACCGACTGAAAGAAGCAAATTCCATGGGAGAATTGACACTGGAAGCGCTGGCCAAGGAGTTTGGTGACATTCGGAGGGGTTGCACTGACCATTGTAAGTTAATTAACTTGTCTCGAATTGTGTTTTCATTTGCAAAGCCTCTGTTTAACAAGATGTTTCAGGGTTGGGATCCTCTGCAGAATCCATGGCATGGTTTCGACATTGTGTCCACCTGGAAGGGTTTGCTTCATGGAGAGGGGGAGAGAGAGGAATGTTATTATACCCAATTGGTTAAAGAGGCTGTGTTATCTGAGGTGAGGATGTCTGGCCTCAATAGTTGGCAGGCTGAGGACCCCGAACCAATGCTCATGTTTTTGGAGTCTTGGAAGGAGCTACTGCCCACTTCTGTTGTTCATGACATATTGGATATGGTGGTCTTGCCTGAATTGAAGGTTGCTATACAGTTGTGGGAACCAAACTTGGGAACTGTTCCTATTCATTTGTGGGTGCATCCATGGCTACCGTTACTGTTTGAATTGGGAGACAAGTATCAATTGGAGCTGGAGGAGTTGTTTGGAACAATGAGGTTGATGTTGTGTGATTTTCTTAGCTCATGGCACCCGAGAGATGGGTCTGGTTATACCATAGTGTCACCGTGGAAAGCGGTGTTTGATTCTACCACTTGGGAACTGCTTATGCGTAGATATGTAGTTCCCAAGTTGGAGCTTGTGCTACTAGAAGATTTTGAAGTGAACCCTTTAAATCAGAAGCTTGATCAGTTTAATTGGTTCATGAGGTGGGCTTCTGCTATTCCTATGCATCTGATGGTCAATGTGATGGTCAAGGGCTTCTTCCCGAATTGGATAAAGGGTTTGCATTTCTGGTTGAAAGCCAATCCCAACTTTGAAGATGTTGCGGATTGGTATAGGGGTTGGAAGGAACTTATCCCCAAAGAGTTTCATGCGAATGAAAGTATTCGTTGTCAGCTTGAGCGTGGTCTTAGTATGATGAACCGGGCTGTTGAGGATATGGAGGCTGCTCAAGCTGATTTGAAAGAGAATTTTAGGGTAGTTGAAAAAAGGCAGGGGAAAGCAGTACCAGCAGCCCAAGCAAACTTCGGCGGCCAAACCAACATGGATGGCATTGATCATGAGATGAATTTGAAAGAGAATGGTAAGATTGATCAAGTGCAATTTGAGGCAAAGAAGAGAGCAGCAGCTTTTCTAGCCAATGCGAAATTGGGCAGCACAACTGACGTGGATGACATTAGTCATCGAATGACCCTGAAAGATGTTATTGAAGCTGAGGCGCAGGAACATGGCTTGCTATTTAGGCCTAAACCTGGGCGAATGTTTGATGGTCACCAGGTATACGGCTTTGGTAACATAAGCATAATGGTGGACTTTCTAAAGGAGAAGATATATGCCCAAACAGAAGCGACGTGGTCTCTTGTGTCCCTTGAGAGGTTACTTGAGTTACACAAGAACAAGGAGACGATGAGTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_1b

Protein Analysis

663

Amino Acids

76.04

Weight (kDa)

5.29

Isoelectric Point (pI)

33.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-patch	PF01585	37 - 77	3.2e-12	G-patch domain
G-patch_2	PF12656	39 - 80	1.9e-06	G-patch domain
GCFC	PF07842	182 - 451	2.1e-66	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25840 AT2G25840 AT2G25840 AT2G25840
fragaria_vesca	FvH4_2g35300 FvH4_2g35300 FvH4_2g35300 FvH4_2g35300 FvH4_2g35300
malus_domestica	MD15G1090800.v1.1
prunus_persica	Prupe.1G445200_v2.0.a1 Prupe.1G445200_v2.0.a1 Prupe.1G445200_v2.0.a1 Prupe.1G445200_v2.0.a1 Prupe.1G445200_v2.0.a1
pyrus_communis	pycom15g08470
rosa_chinensis	RchiOBHm_Chr6g0306611
rosa_laevigata	RLG00000010780
rosa_multiflora	Rmu_sc0005201.1_g000010
rosa_roxburghii	Rroxscaffold_7G00161610
rosa_rugosa	Rorug06G0351000 Rorug06G0351100 Rorug06G0351100
rosa_samantha	Rh6BG437600 Rh6CG477600
rosa_wichuraiana	Rw6G040370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
Acc16I	TGCGCA	1 cut(s)	441
AccB1I	GGYRCC	1 cut(s)	1101
AccB7I	CCANNNNNTGG	2 cut(s)	388, 695
AccI	GTMKAC	1 cut(s)	1854
AccII	CGCG	1 cut(s)	18
AciI	CCGC	7 cut(s)	16, 18, 156, 293, 1148, 1400, 1605
AclWI	GGATC	2 cut(s)	668, 681
AcoI	YGGCCR	2 cut(s)	555, 1606
AcsI	RAATTY	6 cut(s)	217, 421, 430, 523, 1543, 1642
AcuI	CTGAAG	1 cut(s)	152
AfaI	GTAC	1 cut(s)	1581
AfeI	AGCGCT	1 cut(s)	552
AfiI	CCNNNNNNNGG	8 cut(s)	67, 207, 388, 695, 965, 1112, 1826, 1947
AhdI	GACNNNNNGTC	1 cut(s)	709
AjiI	CACGTC	2 cut(s)	1741, 1926
AjnI	CCWGG	3 cut(s)	716, 1825, 1848
Alw26I	GTCTC	6 cut(s)	31, 107, 621, 1020, 1935, 1970
AlwI	GGATC	2 cut(s)	668, 681
Ama87I	CYCGRG	1 cut(s)	1105
Aor51HI	AGCGCT	1 cut(s)	552
AoxI	GGCC	8 cut(s)	94, 209, 378, 411, 555, 811, 1606, 1817
ApeKI	GCWGC	7 cut(s)	253, 346, 1520, 1586, 1697, 1700, 1728
ApoI	RAATTY	6 cut(s)	217, 421, 430, 523, 1543, 1642
Asp700I	GAANNNNTTC	2 cut(s)	356, 1458
AspLEI	GCGC	3 cut(s)	442, 553, 1795
AspS9I	GGNCC	2 cut(s)	379, 835
AsuC2I	CCSGG	1 cut(s)	1499
AsuHPI	GGTGA	6 cut(s)	55, 467, 581, 811, 1128, 1838
AvaI	CYCGRG	1 cut(s)	1105
AvaII	GGWCC	1 cut(s)	835
BalI	TGGCCA	1 cut(s)	557
BamHI	GGATCC	1 cut(s)	673
BanI	GGYRCC	1 cut(s)	1101
BbvCI	CCTCAGC	2 cut(s)	831, 1788
BbvI	GCAGC	7 cut(s)	240, 358, 1507, 1598, 1709, 1712, 1740
BccI	CCATC	8 cut(s)	86, 382, 446, 1106, 1303, 1315, 1616, 1835
BceAI	ACGGC	3 cut(s)	61, 398, 1873
BciT130I	CCWGG	3 cut(s)	718, 1827, 1850
BclI	TGATCA	3 cut(s)	1258, 1630, 1666
BcnI	CCSGG	1 cut(s)	1499
BcoDI	GTCTC	6 cut(s)	31, 107, 621, 1020, 1935, 1970
BfaI	CTAG	2 cut(s)	1220, 1709
BfmI	CTRYAG	1 cut(s)	680
BfoI	RGCGCY	1 cut(s)	554
BisI	GCNGC	9 cut(s)	19, 254, 347, 1521, 1587, 1606, 1698, 1701, 1729
BlsI	GCNGC	9 cut(s)	20, 255, 348, 1522, 1588, 1607, 1699, 1702, 1730
Bme1390I	CCNGG	4 cut(s)	718, 1499, 1827, 1850
Bme18I	GGWCC	1 cut(s)	835
BmeRI	GACNNNNNGTC	1 cut(s)	709
BmeT110I	CYCGRG	1 cut(s)	1105
BmgBI	CACGTC	2 cut(s)	1741, 1926
BmgT120I	GGNCC	2 cut(s)	379, 835
BmiI	GGNNCC	5 cut(s)	22, 675, 837, 957, 1103
BmrFI	CCNGG	4 cut(s)	718, 1499, 1827, 1850
BmsI	GCATC	4 cut(s)	117, 459, 1003, 1312
BoxI	GACNNNNGTC	1 cut(s)	1752
BpmI	CTGGAG	2 cut(s)	7, 1067
Bpu10I	CCTNAGC	2 cut(s)	831, 1788
BpuEI	CTTGAG	4 cut(s)	1493, 1509, 1964, 1976
BpuMI	CCSGG	1 cut(s)	1499
BsaI	GGTCTC	2 cut(s)	107, 1935
BsaJI	CCNNGG	9 cut(s)	16, 66, 97, 528, 558, 689, 998, 1139, 1826
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 1040, 1070
Bsc4I	CCNNNNNNNGG	8 cut(s)	67, 207, 388, 695, 965, 1112, 1826, 1947
Bse1I	ACTGG	1 cut(s)	549
BseBI	CCWGG	3 cut(s)	718, 1827, 1850
BseDI	CCNNGG	9 cut(s)	16, 66, 97, 528, 558, 689, 998, 1139, 1826
BseGI	GGATG	5 cut(s)	126, 810, 994, 1627, 1750
BseLI	CCNNNNNNNGG	8 cut(s)	67, 207, 388, 695, 965, 1112, 1826, 1947
BseMII	CTCAG	3 cut(s)	786, 822, 1779
BseNI	ACTGG	1 cut(s)	549
BseRI	GAGGAG	1 cut(s)	1064
BseXI	GCAGC	7 cut(s)	240, 358, 1507, 1598, 1709, 1712, 1740
Bsh1236I	CGCG	1 cut(s)	18
BshFI	GGCC	8 cut(s)	96, 211, 380, 413, 557, 813, 1608, 1819
BshNI	GGYRCC	1 cut(s)	1101
BsiHKCI	CYCGRG	1 cut(s)	1105
BsiSI	CCGG	1 cut(s)	1498
BslFI	GGGAC	1 cut(s)	1924
BslI	CCNNNNNNNGG	8 cut(s)	67, 207, 388, 695, 965, 1112, 1826, 1947
BsmAI	GTCTC	6 cut(s)	31, 107, 621, 1020, 1935, 1970
BsmBI	CGTCTC	1 cut(s)	1970
BsmFI	GGGAC	1 cut(s)	1924
BsmI	GAATGC	3 cut(s)	71, 186, 442
BsnI	GGCC	8 cut(s)	96, 211, 380, 413, 557, 813, 1608, 1819
Bso31I	GGTCTC	2 cut(s)	107, 1935
BsoBI	CYCGRG	1 cut(s)	1105
Bsp143I	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
Bsp19I	CCATGG	3 cut(s)	528, 689, 998
BspACI	CCGC	7 cut(s)	16, 18, 156, 293, 1148, 1400, 1605
BspANI	GGCC	8 cut(s)	96, 211, 380, 413, 557, 813, 1608, 1819
BspCNI	CTCAG	3 cut(s)	787, 823, 1780
BspFNI	CGCG	1 cut(s)	18
BspHI	TCATGA	3 cut(s)	898, 1275, 1633
BspLI	GGNNCC	5 cut(s)	22, 675, 837, 957, 1103
BspMAI	CTGCAG	1 cut(s)	684
BspPI	GGATC	2 cut(s)	668, 681
BspT107I	GGYRCC	1 cut(s)	1101
BspTNI	GGTCTC	2 cut(s)	107, 1935
BsrI	ACTGG	1 cut(s)	549
BssECI	CCNNGG	9 cut(s)	16, 66, 97, 528, 558, 689, 998, 1139, 1826
BssMI	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
BssNAI	GTATAC	1 cut(s)	1855
BssT1I	CCWWGG	6 cut(s)	66, 97, 528, 558, 689, 998
Bst1107I	GTATAC	1 cut(s)	1855
Bst2UI	CCWGG	3 cut(s)	718, 1827, 1850
Bst4CI	ACNGT	5 cut(s)	948, 973, 1008, 1014, 1140
Bst6I	CTCTTC	2 cut(s)	387, 1685
BstC8I	GCNNGC	3 cut(s)	555, 828, 1808
BstDEI	CTNAG	5 cut(s)	795, 831, 1091, 1484, 1788
BstDSI	CCRYGG	5 cut(s)	16, 528, 689, 998, 1139
BstEII	GGTNACC	1 cut(s)	1844
BstENI	CCTNNNNNAGG	1 cut(s)	65
BstF5I	GGATG	5 cut(s)	126, 810, 994, 1627, 1750
BstFNI	CGCG	1 cut(s)	18
BstH2I	RGCGCY	1 cut(s)	554
BstHHI	GCGC	3 cut(s)	442, 553, 1795
BstKTI	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
BstMAI	GTCTC	6 cut(s)	31, 107, 621, 1020, 1935, 1970
BstMBI	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 262, 1000, 1526, 1583, 1592, 1709, 1816
BstNI	CCWGG	3 cut(s)	718, 1827, 1850
BstPAI	GACNNNNGTC	1 cut(s)	1752
BstPI	GGTNACC	1 cut(s)	1844
BstSCI	CCNGG	4 cut(s)	716, 1497, 1825, 1848
BstSFI	CTRYAG	1 cut(s)	680
BstUI	CGCG	1 cut(s)	18
BstV1I	GCAGC	7 cut(s)	240, 358, 1507, 1598, 1709, 1712, 1740
BstX2I	RGATCY	1 cut(s)	673
BstYI	RGATCY	1 cut(s)	673
BstZ17I	GTATAC	1 cut(s)	1855
BsuRI	GGCC	8 cut(s)	96, 211, 380, 413, 557, 813, 1608, 1819
BtgI	CCRYGG	5 cut(s)	16, 528, 689, 998, 1139
BtgZI	GCGATG	1 cut(s)	105
BtrI	CACGTC	2 cut(s)	1741, 1926
BtsCI	GGATG	5 cut(s)	126, 810, 994, 1627, 1750
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	4 cut(s)	105, 499, 542, 588
Cac8I	GCNNGC	3 cut(s)	555, 828, 1808
CciI	TCATGA	3 cut(s)	898, 1275, 1633
CfoI	GCGC	3 cut(s)	442, 553, 1795
Cfr13I	GGNCC	2 cut(s)	379, 835
Cfr42I	CCGCGG	1 cut(s)	19
CsiI	ACCWGGT	1 cut(s)	1848
Csp6I	GTAC	1 cut(s)	1580
CspCI	CAANNNNNGTGG	4 cut(s)	874, 909, 1722, 1757
CviQI	GTAC	1 cut(s)	1580
DdeI	CTNAG	5 cut(s)	795, 831, 1091, 1484, 1788
DpnI	GATC	5 cut(s)	491, 675, 1260, 1632, 1668
DpnII	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
DraI	TTTAAA	1 cut(s)	1245
DrdI	GACNNNNNNGTC	1 cut(s)	50
DriI	GACNNNNNGTC	1 cut(s)	709
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	2 cut(s)	555, 1606
Eam1104I	CTCTTC	2 cut(s)	387, 1685
Eam1105I	GACNNNNNGTC	1 cut(s)	709
EarI	CTCTTC	2 cut(s)	387, 1685
EciI	GGCGGA	1 cut(s)	282
Eco130I	CCWWGG	6 cut(s)	66, 97, 528, 558, 689, 998
Eco147I	AGGCCT	1 cut(s)	1819
Eco31I	GGTCTC	2 cut(s)	107, 1935
Eco47I	GGWCC	1 cut(s)	835
Eco47III	AGCGCT	1 cut(s)	552
Eco57I	CTGAAG	1 cut(s)	152
Eco88I	CYCGRG	1 cut(s)	1105
Eco91I	GGTNACC	1 cut(s)	1844
EcoNI	CCTNNNNNAGG	1 cut(s)	65
EcoO109I	RGGNCCY	1 cut(s)	835
EcoO65I	GGTNACC	1 cut(s)	1844
EcoRII	CCWGG	3 cut(s)	716, 1825, 1848
EcoT14I	CCWWGG	6 cut(s)	66, 97, 528, 558, 689, 998
EcoT22I	ATGCAT	1 cut(s)	1305
ErhI	CCWWGG	6 cut(s)	66, 97, 528, 558, 689, 998
Esp3I	CGTCTC	1 cut(s)	1970
FalI	AAGNNNNNCTT	2 cut(s)	1319, 1351
FaqI	GGGAC	1 cut(s)	1924
FbaI	TGATCA	3 cut(s)	1258, 1630, 1666
FblI	GTMKAC	1 cut(s)	1854
Fnu4HI	GCNGC	9 cut(s)	19, 254, 347, 1521, 1587, 1606, 1698, 1701, 1729
FokI	GGATG	5 cut(s)	133, 817, 981, 1634, 1757
Fsp4HI	GCNGC	9 cut(s)	19, 254, 347, 1521, 1587, 1606, 1698, 1701, 1729
FspBI	CTAG	2 cut(s)	1220, 1709
FspI	TGCGCA	1 cut(s)	441
GlaI	GCGC	3 cut(s)	441, 552, 1794
GluI	GCNGC	9 cut(s)	19, 254, 347, 1521, 1587, 1606, 1698, 1701, 1729
GsuI	CTGGAG	2 cut(s)	7, 1067
HaeII	RGCGCY	1 cut(s)	554
HaeIII	GGCC	8 cut(s)	96, 211, 380, 413, 557, 813, 1608, 1819
HapII	CCGG	1 cut(s)	1498
HhaI	GCGC	3 cut(s)	442, 553, 1795
Hin6I	GCGC	3 cut(s)	440, 551, 1793
HinP1I	GCGC	3 cut(s)	440, 551, 1793
HindIII	AAGCTT	1 cut(s)	1253
HinfI	GANTC	5 cut(s)	114, 272, 685, 863, 1157
HpaII	CCGG	1 cut(s)	1498
HphI	GGTGA	6 cut(s)	55, 467, 581, 811, 1128, 1838
Hpy166II	GTNNAC	4 cut(s)	714, 1237, 1855, 1885
Hpy188I	TCNGA	8 cut(s)	277, 427, 468, 579, 796, 1251, 1308, 1991
Hpy188III	TCNNGA	7 cut(s)	24, 118, 618, 899, 1276, 1339, 1634
Hpy8I	GTNNAC	4 cut(s)	714, 1237, 1855, 1885
Hpy99I	CGWCG	3 cut(s)	56, 419, 1927
HpyAV	CCTTC	5 cut(s)	346, 715, 865, 928, 1414
HpyCH4III	ACNGT	5 cut(s)	948, 973, 1008, 1014, 1140
HpyCH4IV	ACGT	4 cut(s)	51, 333, 1740, 1925
HpyCH4V	TGCA	8 cut(s)	265, 588, 638, 682, 994, 1303, 1360, 1675
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 262, 1000, 1526, 1583, 1592, 1709, 1816
HpyF3I	CTNAG	5 cut(s)	795, 831, 1091, 1484, 1788
HpySE526I	ACGT	4 cut(s)	51, 333, 1740, 1925
HspAI	GCGC	3 cut(s)	440, 551, 1793
Ksp22I	TGATCA	3 cut(s)	1258, 1630, 1666
KspI	CCGCGG	1 cut(s)	19
Kzo9I	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
LmnI	GCTCC	4 cut(s)	26, 874, 1042, 1207
Lsp1109I	GCAGC	7 cut(s)	240, 358, 1507, 1598, 1709, 1712, 1740
LweI	GCATC	4 cut(s)	117, 459, 1003, 1312
MabI	ACCWGGT	1 cut(s)	1848
MaeI	CTAG	2 cut(s)	1220, 1709
MaeII	ACGT	4 cut(s)	51, 333, 1740, 1925
MaeIII	GTNAC	7 cut(s)	569, 1008, 1134, 1844, 1865, 1950, 1959
MalI	GATC	5 cut(s)	491, 675, 1260, 1632, 1668
MboI	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
MfeI	CAATTG	2 cut(s)	770, 1037
MflI	RGATCY	1 cut(s)	673
MlsI	TGGCCA	1 cut(s)	557
MluNI	TGGCCA	1 cut(s)	557
MlyI	GAGTC	1 cut(s)	872
MmeI	TCCRAC	2 cut(s)	1185, 1397
Mox20I	TGGCCA	1 cut(s)	557
Mph1103I	ATGCAT	1 cut(s)	1305
MroXI	GAANNNNTTC	2 cut(s)	356, 1458
MscI	TGGCCA	1 cut(s)	557
MseI	TTAA	7 cut(s)	339, 605, 609, 651, 777, 1244, 1266
MslI	CAYNNNNRTG	3 cut(s)	311, 1449, 1880
Msp20I	TGGCCA	1 cut(s)	557
MspA1I	CMGCKG	1 cut(s)	18
MspI	CCGG	1 cut(s)	1498
MspR9I	CCNGG	4 cut(s)	718, 1499, 1827, 1850
MunI	CAATTG	2 cut(s)	770, 1037
Mva1269I	GAATGC	3 cut(s)	71, 186, 442
MvaI	CCWGG	3 cut(s)	718, 1827, 1850
MvnI	CGCG	1 cut(s)	18
MwoI	GCNNNNNNNGC	8 cut(s)	162, 262, 1000, 1526, 1583, 1592, 1709, 1816
NciI	CCSGG	1 cut(s)	1499
NcoI	CCATGG	3 cut(s)	528, 689, 998
NdeII	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
NlaIV	GGNNCC	5 cut(s)	22, 675, 837, 957, 1103
NmuCI	GTSAC	3 cut(s)	569, 1134, 1844
NsbI	TGCGCA	1 cut(s)	441
NsiI	ATGCAT	1 cut(s)	1305
PacI	TTAATTAA	1 cut(s)	609
PagI	TCATGA	3 cut(s)	898, 1275, 1633
PceI	AGGCCT	1 cut(s)	1819
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	3 cut(s)	71, 186, 442
PdmI	GAANNNNTTC	2 cut(s)	356, 1458
PfeI	GAWTC	4 cut(s)	114, 272, 685, 1157
PflFI	GACNNNGTC	1 cut(s)	1927
PflMI	CCANNNNNTGG	2 cut(s)	388, 695
PkrI	GCNGC	9 cut(s)	20, 255, 348, 1522, 1588, 1607, 1699, 1702, 1730
PleI	GAGTC	1 cut(s)	871
PpsI	GAGTC	1 cut(s)	871
PpuMI	RGGWCCY	1 cut(s)	835
PshAI	GACNNNNGTC	1 cut(s)	1752
Psp5II	RGGWCCY	1 cut(s)	835
Psp6I	CCWGG	3 cut(s)	716, 1825, 1848
PspEI	GGTNACC	1 cut(s)	1844
PspGI	CCWGG	3 cut(s)	716, 1825, 1848
PspN4I	GGNNCC	5 cut(s)	22, 675, 837, 957, 1103
PspPI	GGNCC	2 cut(s)	379, 835
PspPPI	RGGWCCY	1 cut(s)	835
PsrI	GAACNNNNNNTAC	2 cut(s)	128, 160
PstI	CTGCAG	1 cut(s)	684
PsuI	RGATCY	1 cut(s)	673
PsyI	GACNNNGTC	1 cut(s)	1927
RsaI	GTAC	1 cut(s)	1581
RsaNI	GTAC	1 cut(s)	1580
RseI	CAYNNNNRTG	3 cut(s)	311, 1449, 1880
SacII	CCGCGG	1 cut(s)	19
SaqAI	TTAA	7 cut(s)	339, 605, 609, 651, 777, 1244, 1266
SatI	GCNGC	9 cut(s)	19, 254, 347, 1521, 1587, 1606, 1698, 1701, 1729
Sau3AI	GATC	5 cut(s)	489, 673, 1258, 1630, 1666
Sau96I	GGNCC	2 cut(s)	379, 835
SchI	GAGTC	1 cut(s)	872
ScrFI	CCNGG	4 cut(s)	718, 1499, 1827, 1850
SexAI	ACCWGGT	1 cut(s)	1848
SfaNI	GCATC	4 cut(s)	117, 459, 1003, 1312
SfcI	CTRYAG	1 cut(s)	680
Sfr303I	CCGCGG	1 cut(s)	19
SgrBI	CCGCGG	1 cut(s)	19
SinI	GGWCC	1 cut(s)	835
SmiMI	CAYNNNNRTG	3 cut(s)	311, 1449, 1880
SmlI	CTYRAG	4 cut(s)	1472, 1524, 1943, 1955
SmoI	CTYRAG	4 cut(s)	1472, 1524, 1943, 1955
SseBI	AGGCCT	1 cut(s)	1819
SsiI	CCGC	7 cut(s)	16, 18, 156, 293, 1148, 1400, 1605
SspMI	CTAG	2 cut(s)	1220, 1709
StuI	AGGCCT	1 cut(s)	1819
StyD4I	CCNGG	4 cut(s)	716, 1497, 1825, 1848
StyI	CCWWGG	6 cut(s)	66, 97, 528, 558, 689, 998
TaaI	ACNGT	5 cut(s)	948, 973, 1008, 1014, 1140
TaiI	ACGT	4 cut(s)	54, 336, 1743, 1928
TaqI	TCGA	5 cut(s)	54, 417, 619, 702, 1759
TauI	GCSGC	2 cut(s)	21, 1608
TfiI	GAWTC	4 cut(s)	114, 272, 685, 1157
Tru1I	TTAA	7 cut(s)	339, 605, 609, 651, 777, 1244, 1266
Tru9I	TTAA	7 cut(s)	339, 605, 609, 651, 777, 1244, 1266
TscAI	CASTG	4 cut(s)	112, 499, 549, 595
TseFI	GTSAC	3 cut(s)	569, 1134, 1844
TseI	GCWGC	7 cut(s)	253, 346, 1520, 1586, 1697, 1700, 1728
Tsp45I	GTSAC	3 cut(s)	569, 1134, 1844
TspRI	CASTG	4 cut(s)	112, 499, 549, 595
Tth111I	GACNNNGTC	1 cut(s)	1927
Van91I	CCANNNNNTGG	2 cut(s)	388, 695
VpaK11BI	GGWCC	1 cut(s)	835
XagI	CCTNNNNNAGG	1 cut(s)	65
XapI	RAATTY	6 cut(s)	217, 421, 430, 523, 1543, 1642
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1720
XmiI	GTMKAC	1 cut(s)	1854
XmnI	GAANNNNTTC	2 cut(s)	356, 1458
XspI	CTAG	2 cut(s)	1220, 1709
Zsp2I	ATGCAT	1 cut(s)	1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.