Rorug07G0147100

Glycosyltransferase Family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0014302
Physical Location & Seq
Forward (+)
11607966 .. 11618180
10215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0147100.1

Sequence Viewer

Length: 5058 bp
ATGAAAAGCTGCAAGAGTTTTCTTCTGGAACTGAATATGGCTGAGAGAAGCATCGCATTCTCAAAGCAGGACCCAAATAAGCCTCGCCCGGCGTTGAACGAAGATGGCATGCTTGAACTCACCTCTTACACTGTATCCTTCAACAAAAGAAAGACGAGCCTGTTGGTGGTTTTGCTCAGCAACAAAGCTGAGACAAGTGTGAACACACTCTTAAGTGAGTTCAACTACTCTGAATCTGGGAGTTGGTGCAACAGTACTGTTTTGTTAAAGGCTTCCAAGTTGTGTCATGAGGACAGAATCAATTCTACACAAAAGTACAAGAGCAGAATTTGCAGACTGCACTCTATGGTAGAGTATGATGAGCCAATGAAGTTGATGACAATGGGGGATCACTATTTGGGCAGCATGTCGAGCAATACTGGTCTTGTTCTGCCACTGCAAGCAACCACTCAGAAGATTGATAGGTACGGAGTTCATGATAGTTACAGAGTCTCAATAGTCAATACCACTGCATCAAAGATCATTCTCCAGAAGAGAATGTGCAGACAGCAGAATCCACAACTTTCCAGATCACTGGGGAGCAACATGGGGCAGGCTTTCTGGACCTTATTCTGCATTAGTTCAGAGTGTTCAAATGAGTCTGGAAATGAATGCAGTTCTAGCATTCTAGCCATTATCAATCCAAATTCATGTATCAACAATATTGTCGTCATTGCAGTTGATATTTTGCTCCTACTCATCTTGTTATGTTTCCTTATGTATCGATTAGCATCAAAGAAGATTATAGCACCATCACAGCCTCACACCTTCTCTCCAGTATCAGTTGTGTCAGTCAGTTTCAATGCTGGTTTGGCTTTGGCCTACTTGGGGTCTGGGATATGGACAATCATTGAGAAAGAAAATACAGATCACACGGTTTTACCTGTACATGGATGGCTAGTATATTTTTTTCAAGGGTTTACATGGTTGGGCCTGGGTTTTACCATAAACCTCTCAAAACCACACCTTCCACATAATGCAATAATGAAATTATTTTCAATTTTTGGTTTCTTAATTGCAGTTTTTCTTTGTGGTTCATCAATTTGGGAATCTATTCTGGATGAGGCCTTATCAGATCTGATTGTTTTAAACATTCTTTGTTTCCCTGGATCAATTCTCTTGCTTTTTAGTGCATTTGACGGAACCGATAATGCAAAAGGTGATCCAGAAGTCCATAATGGTGATGCTTTCTACACACCTTTGCTAGGTGCAGAACCAGATATCACAGGTGATATCAGTCCAAATGACACTGTAACTCCTTTTGCAAAAGCTGGATTGTTTAGTAAAATGTCATTTTGGTGGTTGAATCCATTAATGAAGAAAGGTAAGGAAAAGATTCTTGAGAATGAAGATATTCCACAATTGCGAGAAGCCGATCGAGCACAAACGTTGCACTCAATATATAGGGAGCAAATGCAGAAAAGAAAAGAAAGATATTTGTCTGGTGACCCATCTATTCTGTCTATAATTTTTTTATGCCAGAGGAAAGCTATTTTGATTTCAGGGTTCTTTGCACTTCTCAAGGTTCTCACAATGACTATCTCCCCACTGTTTCTCATAGCTTTCATCAAGGTTGTTGATGGCGATGCAGCTTTTAAATATGAGGTTTATGCACTGACTGCTGGTCTGTTCGTTGTGAAAATCGTGGAGTCGCTGTCAGAGAGGCAATGGTTCTTTAGAACTAGACTTATTGGACTCCAGGTACGATCATTGATATCTGCAGAAGTTTATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCCGGTGAGATAGTGAATTATGTAACAGTGGATGCTTACAGGATTGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAACCTCCAGTTGTGTCTCTCATTGATTATTATTTACTTCGCTGTTGGGGTAGCAACAGTTGCAGCTCTATCTGTTCTCATATTGACTGTGGTGGTTAGCTCCCCTTTGGCAAAGTTGCAGCACGAGTATCAAACAAAGTTCATGATTGCACAAAATAAGAGGCTGAAGGCCATGACGGAAGCACTATCAAATATGAAGATCTTGAAGCTTTATTCTTGGGAGACAAATTTCAAGAAGGTCGTGGAAGGGCTTAGAGCAGAAGAACTCAAATGGATATGTAAAGTACTGTCACAAAAGGGTTATTGTAATGCTTTATTTTGGACATCTCCTATTTTGGCAGCAGCTGTCACCTTTTGGACCTGCTACTTCCTTGGATTTACACTCTCTCCAACTAATGTTTTCACGTTTCTAGCAACTTTGCGTATTCTTCAGGAGCCAATAAGGCTAATCCCAGATGTTTTTGGAGCATTTATTGAAGCGAAGGTTTCCTTCTCTCGGATTGTGAAGTTCCTTGATGCACCAGAGTTGGAGAACAGACATACAAGGAAAGAGAGCTGTGGCAAGGAGGTTGAGCATTCCATTTTCATTAGAGCTTCAGAAATATCATGGGATACTAATTCTGCAAAGGCCACATTGAGGAACATTAATATAGTGGTTAATCGAGGAGAAAAAGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAACTCTTTTAGCTGCAATTCTTGGAGAAGTTCCACGCGTCACTGGCATCGTTCAAGTATATGGCACGGTAGCATATGTTTCTCAGTCTGCTTGGATCGAAACAGGAACTATACAAGATAATATTATGTTTGGGACTCCCATGGATCATGTTAGATACCAAGAAACTCTTGAGAAGTGTTCTCTTGTAAAGGACCTTGAGATTCTTCCATTCCGAGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAGAAACAGCGCATTCAACTTGCACGTGCATTGTATCAAAATGCGGATGTCTACCTCTTGGACGATCCATTCAGTGCAGTTGATGCCCATACTGCCACAAGCCTATTCAATGACTATGTGATGGGTGCTCTGGCAGAGAAGACAGTGTTGCTTGTGACACACCAAGTCGACTTCCTTCCAACTTTTAATTCAATATTGTTGATGTCTTCAGGGAAGATTTCAAGAGCAGCTCCTTACGAAGAGTTGCTGGCTTCTTGTCAAGAGTTCCAAGAACTTGTCAATGCACACAATAAAACTGTTGCTTCCCAGAGGCAAGTTGAATATGCCTCCACTAGAAAACGTAAATTGTCTGCAGAGGAGATTGAGAATGTTAGAACTGATGTACAGCCAATAGAATTTTCGGGAGATCAATTGATTAAGAAAGAAGAGCGAGAAACAGGAGACTCTGGGTTCAAGCCATGCATTCTGTATTTGAAGCATGGCAAGGGATTTTTGCACTTCTCCTTATCTGGTGTTTTCTTGTTTCTATTCATAGCTGGGCAGTTACTTCAGAACTTTTGGTTGGCTTTGAATCTTCAGGATTACAGTGTTTCCAGAGTCAAACTCTTCACAGTTTACTCTGTGATCTTCTGTATTATGGCATTCTTCGTGCTTCTTCGATCTTTTAGAATAGTCGATTTAGGATGTGGAGCATCAGAATCCATTTTCTCCACACTACTCAATTCCCTTTTCCGAGCACCAATGCTGTTTTATGATTCAACACCTTTGGGGAGGATACTTAGTCGGGTATCTACTGATATGAATATCATCGACCTTGAAGTAGCATTAAAGTTAGCAGTAGCTGTTGGGGCAACTCTGAACACATTTAGCATATTTTTAGTCATGATTATTCTTACTTGGCCACTCGTGTTCCTGATTGTACCCACAGTTTATGTTACTTTTTGCTTTCAGAGTTACTACTTTGCATCGTCAAAAGAGTTAATGCGAATGAATGGCACGACTAAATCTGCACTTGCAAGCCACCTTTCGGAATCTATTGCTGGAGCAGTGACAATCAGAGCTTTTGGAGAGGAGGACAGATTCTTCTCCAAAAACTTAGAATTCATTGATGCAAATTCTAGCGCTGACTTCAATAGCTTTTCAACAAACGAGTGGTTGATTGAACGTTTAGAATTGCTTTGCGCTATTGTGCTCTCAGCCTCAGCACTTGCCATTACTTGGATTCAGTCTGGTGCTTCTTCCTCTGGATTTATTGGGATGACACTATCATATGGCCTTTCACTAAACGTATTCCTAGTAATTTTTGTACAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAACAATACATGCACATTCCTAGCGAAGCCGCAGAAGTAATAGAAGACAACCGACCTGCACACAATTGGCCTATTGTTGGTAAAGTGGAAATACATGGCTTAGAGGTAAGATATAGGCCAAATTCTCCTTTGGTTCTTCGTGGGATAAATTGCATCATTGAAGGAGGCTACAAAATTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGTGTGGTAGAGCCTACAGGAGGAAAGGTCATTGTAGATGGCTATGACATTTGCACAATTGGCCTTCATGATTTAAGATCACGTTTTGGGATTATCCCTCAAGATCCGACATTGTTTGGCGGGTCTGTGAGATTCAACCTCGATCCCTTAGCAGAGCATACTGATCATGAAATATGGGAGGTTCTTGAGAAATGTCAGCTACGAGAGGTCATTGTAGAGGAAGAAGGGGGCCTAGATTCTTTAGTTGTGCAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTATTCTGCTTGGGGCGTGCTTTATTGAAGAAAAGCCGAATACTAGTGCTTGATGAAGCCACAGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATAAGAACAGAATTTGCAGACCGCACTGTAATAACAGTGGCTCATAGGATACCCACCGTGATGGACTGCACTAAGGTGCTCGCTCTTAGTGATGGTAAAGTAGTAGAGTATGATGAGCCAATGAAGCTGATGAACAATGAGGGATCACTATTCGGGCAGCTTGTCAAGGAGTACTGGTCTCGTTCTGCCAATGCTAGCATGCAATCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0016020 GO:0016740 GO:0016757
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_4 Glycos_transf_1

Protein Analysis

1685

Amino Acids

188.36

Weight (kDa)

6.55

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 199 - 395 3.8e-68 ABCC10 N-terminal domain
ABC_membrane PF00664 511 - 779 3.4e-27 ABC transporter transmembrane region
ABC_tran PF00005 845 - 979 1e-20 ABC transporter
ABC_membrane PF00664 1124 - 1379 4.8e-28 ABC transporter transmembrane region
ABC_tran PF00005 1453 - 1601 2.6e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014302)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19460
fragaria_vesca FvH4_5g24400
malus_domestica MD06G1022000.v1.1 MD16G1288000.v1.1
prunus_persica Prupe.5G016500_v2.0.a1 Prupe.5G099100_v2.0.a1
pyrus_communis pycom06g01590
rosa_chinensis RchiOBHm_Chr7g0214801
rosa_laevigata RLG00000002721
rosa_multiflora Rmu_sc0002308.1_g000036
rosa_roxburghii Rroxscaffold_3G00245060
rosa_rugosa Rorug07G0147100
rosa_samantha Rh7AG284100 Rh7BG275000 Rh7CG303500 Rh7DG287400
rosa_wichuraiana Rw7G024220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2267, 4285
AccB7I CCANNNNNTGG 1 cut(s) 4083
AccI GTMKAC 2 cut(s) 2916, 3033
AccII CGCG 1 cut(s) 2643
AciI CCGC 4 cut(s) 2909, 4251, 4572, 4864
AclI AACGTT 2 cut(s) 1427, 4030
AclWI GGATC 9 cut(s) 396, 1156, 1196, 2708, 2757, 2924, 4550, 4589, 4993
AcoI YGGCCR 3 cut(s) 2863, 3764, 4408
AcuI CTGAAG 6 cut(s) 2084, 2312, 2478, 3057, 3398, 3425
AcvI CACGTG 1 cut(s) 2891
AfeI AGCGCT 1 cut(s) 3988
AflII CTTAAG 1 cut(s) 211
AflIII ACRYGT 1 cut(s) 2641
AhdI GACNNNNNGTC 1 cut(s) 1662
AhlI ACTAGT 1 cut(s) 4780
AjnI CCWGG 3 cut(s) 972, 1144, 1737
AjuI GAANNNNNNNTTGG 6 cut(s) 3037, 3069, 3247, 3279, 3410, 3442
AleI CACNNNNGTG 1 cut(s) 4916
Alw21I GWGCWC 5 cut(s) 1423, 2995, 3604, 4059, 4923
Alw26I GTCTC 6 cut(s) 185, 496, 1919, 2114, 3300, 5025
AlwI GGATC 9 cut(s) 396, 1156, 1196, 2708, 2757, 2924, 4550, 4589, 4993
AlwNI CAGNNNCTG 2 cut(s) 2243, 3707
Aor51HI AGCGCT 1 cut(s) 3988
AseI ATTAAT 2 cut(s) 1352, 2544
Asp700I GAANNNNTTC 4 cut(s) 301, 1092, 1374, 1392
AspLEI GCGC 3 cut(s) 2877, 3989, 4049
AspS9I GGNCC 7 cut(s) 70, 603, 970, 1893, 2256, 2797, 4681
AsuC2I CCSGG 2 cut(s) 89, 1818
AsuHPI GGTGA 8 cut(s) 112, 1211, 1232, 1280, 1496, 1832, 1874, 2239
AsuNHI GCTAGC 2 cut(s) 4189, 5036
AvaII GGWCC 5 cut(s) 70, 603, 1893, 2256, 2797
BalI TGGCCA 2 cut(s) 2865, 3766
BauI CACGAG 2 cut(s) 2021, 3770
BbrPI CACGTG 1 cut(s) 2891
BbsI GAAGAC 3 cut(s) 3011, 3063, 4272
Bbv12I GWGCWC 5 cut(s) 1423, 2995, 3604, 4059, 4923
BbvCI CCTCAGC 1 cut(s) 4066
BciT130I CCWGG 3 cut(s) 974, 1146, 1739
BciVI GTATCC 4 cut(s) 145, 2503, 3633, 4884
BclI TGATCA 1 cut(s) 4615
BcnI CCSGG 2 cut(s) 89, 1818
BcoDI GTCTC 6 cut(s) 185, 496, 1919, 2114, 3300, 5025
BcuI ACTAGT 1 cut(s) 4780
BfmI CTRYAG 4 cut(s) 1758, 3216, 4209, 4467
BfoI RGCGCY 1 cut(s) 3990
BfrI CTTAAG 1 cut(s) 211
BfuAI ACCTGC 2 cut(s) 2267, 4285
BfuI GTATCC 4 cut(s) 145, 2503, 3633, 4884
BglI GCCNNNNNGGC 1 cut(s) 2341
BglII AGATCT 3 cut(s) 1114, 2097, 2821
BlpI GCTNAGC 1 cut(s) 176
BmcAI AGTACT 3 cut(s) 256, 2184, 5015
Bme1390I CCNGG 5 cut(s) 89, 974, 1146, 1739, 1818
Bme18I GGWCC 5 cut(s) 70, 603, 1893, 2256, 2797
BmeRI GACNNNNNGTC 1 cut(s) 1662
BmgT120I GGNCC 7 cut(s) 70, 603, 970, 1893, 2256, 2797, 4681
BmiI GGNNCC 4 cut(s) 72, 1183, 2334, 4682
BmrFI CCNGG 5 cut(s) 89, 974, 1146, 1739, 1818
BmrI ACTGGG 1 cut(s) 584
BmtI GCTAGC 2 cut(s) 4193, 5040
BmuI ACTGGG 1 cut(s) 584
BpiI GAAGAC 3 cut(s) 3011, 3063, 4272
BplI GAGNNNNNCTC 4 cut(s) 2579, 2611, 3453, 3485
BpmI CTGGAG 7 cut(s) 512, 798, 1721, 1889, 3927, 4738, 4817
Bpu10I CCTNAGC 3 cut(s) 2596, 4066, 4600
Bpu1102I GCTNAGC 1 cut(s) 176
BpuEI CTTGAG 6 cut(s) 1400, 1544, 2795, 2822, 4536, 4658
BpuMI CCSGG 2 cut(s) 89, 1818
Bsa29I ATCGAT 1 cut(s) 763
BsaAI YACGTR 1 cut(s) 2891
BsaBI GATNNNNATC 1 cut(s) 769
BsaI GGTCTC 1 cut(s) 5025
BsaJI CCNNGG 4 cut(s) 973, 1144, 2269, 2745
Bse1I ACTGG 8 cut(s) 424, 579, 815, 1906, 2653, 4420, 4721, 5021
Bse3DI GCAATG 2 cut(s) 711, 1712
Bse8I GATNNNNATC 1 cut(s) 769
BseBI CCWGG 3 cut(s) 974, 1146, 1739
BseCI ATCGAT 1 cut(s) 763
BseDI CCNNGG 4 cut(s) 973, 1144, 2269, 2745
BseGI GGATG 6 cut(s) 938, 1105, 1852, 2917, 3554, 4128
BseJI GATNNNNATC 1 cut(s) 769
BseMI GCAATG 2 cut(s) 711, 1712
BseMII CTCAG 9 cut(s) 33, 180, 190, 464, 2610, 2702, 2843, 4074, 4080
BseNI ACTGG 8 cut(s) 424, 579, 815, 1906, 2653, 4420, 4721, 5021
BseRI GAGGAG 3 cut(s) 2577, 3236, 3950
BseYI CCCAGC 1 cut(s) 3401
BsgI GTGCAG 7 cut(s) 323, 562, 1269, 2961, 3858, 4263, 4894
Bsh1236I CGCG 1 cut(s) 2643
Bsh1285I CGRYCG 1 cut(s) 1417
BshVI ATCGAT 1 cut(s) 763
BsiEI CGRYCG 1 cut(s) 1417
BsiHKAI GWGCWC 5 cut(s) 1423, 2995, 3604, 4059, 4923
BsiSI CCGG 3 cut(s) 89, 1818, 4411
BslFI GGGAC 2 cut(s) 2752, 4740
BsmAI GTCTC 6 cut(s) 185, 496, 1919, 2114, 3300, 5025
BsmFI GGGAC 2 cut(s) 2752, 4740
BsmI GAATGC 7 cut(s) 56, 656, 663, 2473, 2877, 3327, 3506
Bso31I GGTCTC 1 cut(s) 5025
Bsp1286I GDGCHC 5 cut(s) 1423, 2995, 3604, 4059, 4923
Bsp1407I TGTACA 3 cut(s) 925, 3247, 4171
Bsp1720I GCTNAGC 1 cut(s) 176
Bsp19I CCATGG 1 cut(s) 2745
BspACI CCGC 4 cut(s) 2909, 4251, 4572, 4864
BspCNI CTCAG 9 cut(s) 34, 181, 189, 463, 2609, 2701, 2842, 4073, 4079
BspDI ATCGAT 1 cut(s) 763
BspFNI CGCG 1 cut(s) 2643
BspHI TCATGA 6 cut(s) 286, 475, 2040, 3747, 4519, 4618
BspLI GGNNCC 4 cut(s) 72, 1183, 2334, 4682
BspMAI CTGCAG 2 cut(s) 1762, 3220
BspMI ACCTGC 2 cut(s) 2267, 4285
BspOI GCTAGC 2 cut(s) 4193, 5040
BspPI GGATC 9 cut(s) 396, 1156, 1196, 2708, 2757, 2924, 4550, 4589, 4993
BspQI GCTCTTC 1 cut(s) 3285
BspTI CTTAAG 1 cut(s) 211
BspTNI GGTCTC 1 cut(s) 5025
BsrDI GCAATG 2 cut(s) 711, 1712
BsrGI TGTACA 3 cut(s) 925, 3247, 4171
BsrI ACTGG 8 cut(s) 424, 579, 815, 1906, 2653, 4420, 4721, 5021
BssECI CCNNGG 4 cut(s) 973, 1144, 2269, 2745
BssSI CACGAG 2 cut(s) 2021, 3770
BssT1I CCWWGG 2 cut(s) 2269, 2745
Bst2BI CACGAG 2 cut(s) 2021, 3770
Bst2UI CCWGG 3 cut(s) 974, 1146, 1739
Bst6I CTCTTC 4 cut(s) 527, 3099, 3285, 3476
BstAFI CTTAAG 1 cut(s) 211
BstAPI GCANNNNNTGC 4 cut(s) 330, 1658, 1958, 2948
BstAUI TGTACA 3 cut(s) 925, 3247, 4171
BstBAI YACGTR 1 cut(s) 2891
BstDSI CCRYGG 1 cut(s) 2745
BstEII GGTNACC 1 cut(s) 1484
BstENI CCTNNNNNAGG 2 cut(s) 1242, 4470
BstF5I GGATG 6 cut(s) 938, 1105, 1852, 2917, 3554, 4128
BstFNI CGCG 1 cut(s) 2643
BstH2I RGCGCY 1 cut(s) 3990
BstHHI GCGC 3 cut(s) 2877, 3989, 4049
BstMAI GTCTC 6 cut(s) 185, 496, 1919, 2114, 3300, 5025
BstMCI CGRYCG 1 cut(s) 1417
BstNI CCWGG 3 cut(s) 974, 1146, 1739
BstNSI RCATGY 5 cut(s) 112, 409, 4189, 4234, 5044
BstPI GGTNACC 1 cut(s) 1484
BstSCI CCNGG 5 cut(s) 87, 972, 1144, 1737, 1816
BstSFI CTRYAG 4 cut(s) 1758, 3216, 4209, 4467
BstUI CGCG 1 cut(s) 2643
BstV2I GAAGAC 3 cut(s) 3011, 3063, 4272
BstX2I RGATCY 4 cut(s) 1114, 2097, 2821, 4555
BstXI CCANNNNNNTGG 2 cut(s) 574, 4903
BstYI RGATCY 4 cut(s) 1114, 2097, 2821, 4555
Bsu15I ATCGAT 1 cut(s) 763
BsuI GTATCC 4 cut(s) 145, 2503, 3633, 4884
BsuTUI ATCGAT 1 cut(s) 763
BtgI CCRYGG 1 cut(s) 2745
BtgZI GCGATG 2 cut(s) 37, 1638
BtsCI GGATG 6 cut(s) 938, 1105, 1852, 2917, 3554, 4128
BtsI GCAGTG 3 cut(s) 434, 507, 3918
BveI ACCTGC 2 cut(s) 2267, 4285
CaiI CAGNNNCTG 2 cut(s) 2243, 3707
CciI TCATGA 6 cut(s) 286, 475, 2040, 3747, 4519, 4618
CfoI GCGC 3 cut(s) 2877, 3989, 4049
Cfr13I GGNCC 7 cut(s) 70, 603, 970, 1893, 2256, 2797, 4681
ClaI ATCGAT 1 cut(s) 763
CseI GACGC 1 cut(s) 2632
CspCI CAANNNNNGTGG 2 cut(s) 2839, 2874
DraI TTTAAA 2 cut(s) 1128, 1636
DriI GACNNNNNGTC 1 cut(s) 1662
EaeI YGGCCR 3 cut(s) 2863, 3764, 4408
Eam1104I CTCTTC 4 cut(s) 527, 3099, 3285, 3476
Eam1105I GACNNNNNGTC 1 cut(s) 1662
EarI CTCTTC 4 cut(s) 527, 3099, 3285, 3476
Eco130I CCWWGG 2 cut(s) 2269, 2745
Eco147I AGGCCT 1 cut(s) 1106
Eco31I GGTCTC 1 cut(s) 5025
Eco32I GATATC 3 cut(s) 1261, 1273, 1755
Eco47I GGWCC 5 cut(s) 70, 603, 1893, 2256, 2797
Eco47III AGCGCT 1 cut(s) 3988
Eco57I CTGAAG 6 cut(s) 2084, 2312, 2478, 3057, 3398, 3425
Eco72I CACGTG 1 cut(s) 2891
Eco91I GGTNACC 1 cut(s) 1484
EcoNI CCTNNNNNAGG 2 cut(s) 1242, 4470
EcoO109I RGGNCCY 3 cut(s) 70, 2797, 4681
EcoO65I GGTNACC 1 cut(s) 1484
EcoRI GAATTC 1 cut(s) 3965
EcoRII CCWGG 3 cut(s) 972, 1144, 1737
EcoRV GATATC 3 cut(s) 1261, 1273, 1755
EcoT14I CCWWGG 2 cut(s) 2269, 2745
EcoT22I ATGCAT 1 cut(s) 3329
ErhI CCWWGG 2 cut(s) 2269, 2745
FalI AAGNNNNNCTT 4 cut(s) 2372, 2404, 2757, 2789
FaqI GGGAC 2 cut(s) 2752, 4740
FauI CCCGC 1 cut(s) 4565
FauNDI CATATG 2 cut(s) 2680, 4135
FbaI TGATCA 1 cut(s) 4615
FblI GTMKAC 2 cut(s) 2916, 3033
FokI GGATG 6 cut(s) 945, 1112, 1859, 2924, 3561, 4135
GlaI GCGC 3 cut(s) 2876, 3988, 4048
GsaI CCCAGC 1 cut(s) 3405
GsuI CTGGAG 7 cut(s) 512, 798, 1721, 1889, 3927, 4738, 4817
HaeII RGCGCY 1 cut(s) 3990
HapII CCGG 3 cut(s) 89, 1818, 4411
HgaI GACGC 1 cut(s) 2632
HhaI GCGC 3 cut(s) 2877, 3989, 4049
Hin6I GCGC 3 cut(s) 2875, 3987, 4047
HinP1I GCGC 3 cut(s) 2875, 3987, 4047
HincII GTYRAC 1 cut(s) 3034
HindII GTYRAC 1 cut(s) 3034
HindIII AAGCTT 1 cut(s) 2105
HpaII CCGG 3 cut(s) 89, 1818, 4411
HphI GGTGA 8 cut(s) 112, 1211, 1232, 1280, 1496, 1832, 1874, 2239
Hpy166II GTNNAC 6 cut(s) 202, 960, 1896, 2917, 3034, 3481
Hpy8I GTNNAC 6 cut(s) 202, 960, 1896, 2917, 3034, 3481
HpyCH4IV ACGT 7 cut(s) 1427, 2303, 2890, 3205, 4030, 4152, 4534
HpySE526I ACGT 7 cut(s) 1427, 2303, 2890, 3205, 4030, 4152, 4534
HspAI GCGC 3 cut(s) 2875, 3987, 4047
Ksp22I TGATCA 1 cut(s) 4615
LguI GCTCTTC 1 cut(s) 3285
MaeII ACGT 7 cut(s) 1427, 2303, 2890, 3205, 4030, 4152, 4534
MfeI CAATTG 4 cut(s) 1400, 3275, 4285, 4509
MflI RGATCY 4 cut(s) 1114, 2097, 2821, 4555
MhlI GDGCHC 5 cut(s) 1423, 2995, 3604, 4059, 4923
MlsI TGGCCA 2 cut(s) 2865, 3766
MluI ACGCGT 1 cut(s) 2641
MluNI TGGCCA 2 cut(s) 2865, 3766
MmeI TCCRAC 4 cut(s) 2312, 2406, 3068, 4583
Mox20I TGGCCA 2 cut(s) 2865, 3766
Mph1103I ATGCAT 1 cut(s) 3329
MroXI GAANNNNTTC 4 cut(s) 301, 1092, 1374, 1392
MscI TGGCCA 2 cut(s) 2865, 3766
MslI CAYNNNNRTG 4 cut(s) 1218, 1336, 4901, 4916
Msp20I TGGCCA 2 cut(s) 2865, 3766
MspA1I CMGCKG 1 cut(s) 2243
MspCI CTTAAG 1 cut(s) 211
MspI CCGG 3 cut(s) 89, 1818, 4411
MspR9I CCNGG 5 cut(s) 89, 974, 1146, 1739, 1818
MunI CAATTG 4 cut(s) 1400, 3275, 4285, 4509
Mva1269I GAATGC 7 cut(s) 56, 656, 663, 2473, 2877, 3327, 3506
MvaI CCWGG 3 cut(s) 974, 1146, 1739
MvnI CGCG 1 cut(s) 2643
NciI CCSGG 2 cut(s) 89, 1818
NcoI CCATGG 1 cut(s) 2745
NdeI CATATG 2 cut(s) 2680, 4135
NheI GCTAGC 2 cut(s) 4189, 5036
NlaIV GGNNCC 4 cut(s) 72, 1183, 2334, 4682
NmuCI GTSAC 6 cut(s) 1484, 2187, 2245, 2644, 3019, 3913
NsiI ATGCAT 1 cut(s) 3329
NspI RCATGY 5 cut(s) 112, 409, 4189, 4234, 5044
OliI CACNNNNGTG 1 cut(s) 4916
PaeI GCATGC 3 cut(s) 112, 4189, 5044
PagI TCATGA 6 cut(s) 286, 475, 2040, 3747, 4519, 4618
PceI AGGCCT 1 cut(s) 1106
PciSI GCTCTTC 1 cut(s) 3285
PctI GAATGC 7 cut(s) 56, 656, 663, 2473, 2877, 3327, 3506
PdmI GAANNNNTTC 4 cut(s) 301, 1092, 1374, 1392
PflMI CCANNNNNTGG 1 cut(s) 4083
Ple19I CGATCG 1 cut(s) 1417
PmaCI CACGTG 1 cut(s) 2891
PmlI CACGTG 1 cut(s) 2891
Ppu21I YACGTR 1 cut(s) 2891
PpuMI RGGWCCY 2 cut(s) 70, 2797
PshBI ATTAAT 2 cut(s) 1352, 2544
Psp1406I AACGTT 2 cut(s) 1427, 4030
Psp5II RGGWCCY 2 cut(s) 70, 2797
Psp6I CCWGG 3 cut(s) 972, 1144, 1737
PspCI CACGTG 1 cut(s) 2891
PspEI GGTNACC 1 cut(s) 1484
PspFI CCCAGC 1 cut(s) 3401
PspGI CCWGG 3 cut(s) 972, 1144, 1737
PspN4I GGNNCC 4 cut(s) 72, 1183, 2334, 4682
PspPI GGNCC 7 cut(s) 70, 603, 970, 1893, 2256, 2797, 4681
PspPPI RGGWCCY 2 cut(s) 70, 2797
PstI CTGCAG 2 cut(s) 1762, 3220
PstNI CAGNNNCTG 2 cut(s) 2243, 3707
PsuI RGATCY 4 cut(s) 1114, 2097, 2821, 4555
PvuI CGATCG 1 cut(s) 1417
PvuII CAGCTG 1 cut(s) 2243
RseI CAYNNNNRTG 4 cut(s) 1218, 1336, 4901, 4916
SalI GTCGAC 1 cut(s) 3032
SapI GCTCTTC 1 cut(s) 3285
Sau96I GGNCC 7 cut(s) 70, 603, 970, 1893, 2256, 2797, 4681
ScaI AGTACT 3 cut(s) 256, 2184, 5015
ScrFI CCNGG 5 cut(s) 89, 974, 1146, 1739, 1818
SduI GDGCHC 5 cut(s) 1423, 2995, 3604, 4059, 4923
SfcI CTRYAG 4 cut(s) 1758, 3216, 4209, 4467
SinI GGWCC 5 cut(s) 70, 603, 1893, 2256, 2797
SmiMI CAYNNNNRTG 4 cut(s) 1218, 1336, 4901, 4916
SmlI CTYRAG 7 cut(s) 211, 1379, 1559, 2774, 2801, 4551, 4637
SmoI CTYRAG 7 cut(s) 211, 1379, 1559, 2774, 2801, 4551, 4637
SpeI ACTAGT 1 cut(s) 4780
SphI GCATGC 3 cut(s) 112, 4189, 5044
SseBI AGGCCT 1 cut(s) 1106
SsiI CCGC 4 cut(s) 2909, 4251, 4572, 4864
SspI AATATT 3 cut(s) 703, 2728, 3060
StuI AGGCCT 1 cut(s) 1106
StyD4I CCNGG 5 cut(s) 87, 972, 1144, 1737, 1816
StyI CCWWGG 2 cut(s) 2269, 2745
TaiI ACGT 7 cut(s) 1430, 2306, 2893, 3208, 4033, 4155, 4537
TatI WGTACW 7 cut(s) 254, 315, 925, 2182, 3247, 4171, 5013
TauI GCSGC 1 cut(s) 4253
TseFI GTSAC 6 cut(s) 1484, 2187, 2245, 2644, 3019, 3913
Tsp45I GTSAC 6 cut(s) 1484, 2187, 2245, 2644, 3019, 3913
TspGWI ACGGA 3 cut(s) 483, 1194, 2090
Van91I CCANNNNNTGG 1 cut(s) 4083
Vha464I CTTAAG 1 cut(s) 211
VpaK11BI GGWCC 5 cut(s) 70, 603, 1893, 2256, 2797
VspI ATTAAT 2 cut(s) 1352, 2544
XagI CCTNNNNNAGG 2 cut(s) 1242, 4470
XceI RCATGY 5 cut(s) 112, 409, 4189, 4234, 5044
XcmI CCANNNNNNNNNTGG 1 cut(s) 4804
XmiI GTMKAC 2 cut(s) 2916, 3033
XmnI GAANNNNTTC 4 cut(s) 301, 1092, 1374, 1392
ZrmI AGTACT 3 cut(s) 256, 2184, 5015
Zsp2I ATGCAT 1 cut(s) 3329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.