Rorug07G0303100

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0019890
Physical Location & Seq
Reverse (-)
30141706 .. 30145007
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0303100.1

Sequence Viewer

Length: 1860 bp
ATGTACGGCAGGGATCCATGGGGCGGCCCGCTGGAGATCAACACGGCGGACTCGGCCACCGACGACGACCGCAGCCGGAACCTGCAGGACCTCGACCGGGCGGCGCTGTCGTCTCGGCCGCTCGACGAGACGCAGCAGAGCTGGCTGCTGGGCCCCTCCGGGGAGCAGAAGAAGAAGAAGTACGTGGATCTGGGGTGCGTCATCGTCAGCCGCAAGATCTTTATCTGGACGGTAGGGACGCTCCTCGTCTCCGGCTTGCTCGCCGGACTGATCGTCCTCATCGTCAAGACCGTGCCGCGTCACCACCACGCCAAGGCTCCTCCGGACAACTACACTCTCGCTCTCCACAAGGCTCTCATGTTCTTCAACGCTCAGAAATCTGGTAAGCTTCCGAAGCACAATAATGTTTCGTGGAGGGGAAACTCGTGCGTCAAGGATGGTGACCCCGGCACCATGTTCAAAGATCTGGCGGGTGGTTACTATGATGCTGGAGATGCCATCAAGTTCAACTTCCCTCAGTCATTCGCCATGACTCTGCTGAGCTGGAGCGTGATCGAGTACAGTGCCAAGTACGAAGCCGCCGGGGAACTAGCTCATGCAAAGGAGCTCATCAAATGGGGCGCTGATTACTTCCTCAAGACCTTCAACCATACCGCTGATACAATCGACATGATGGTTTCGCAGGTTGGGTCGGGAGATACTGCTAAAGGAAGTACTACTCCTAATGATCACTATTGCTGGACTCGACCCGAAGACATTGATTATAAACGCCCTGTGACTACTACCGGTAGTTGCGGCGATCTTGCATCTGAGATGGCTGCAGCTTTGGCTGCTGCATCCATAGTGTTTAAGGACAACAAGGCCTACTCGCAGAAACTTGTGCACGGCGCCAAAACGCTCTTCACGTTCGGAAGGGAACGAGGAAGAGGCCTCTACAGTGCTCCTGGTTCAGAGGCTTCCGTCTTTTACAATTCTACGGGGTACTGGGATGAATACGTGTGGGGTGCAGCTTGGATGTATTATGCCACCGGGAATAACTCTTATCTCACTCTAGCAACACATCCTACTCTTGCCAAGCATGCTGGTGCCTTCTGGGGCGGCCCTGATTATGGAGTATTCAGTTGGGACAACAAACTTGCTGGTGCACAGGTGCTTCTGACCCGTTTGAGGTTATTCTTGAGCCCTGGTTACCCATATGAAGAAATCTTGAGGACATTTCAGAATCAGACTAGCATAGTCATGTGCTCATACCTGCCAATATTCACAACCTTTAATAGAACCAAAGGTGGCTTGATCCAGTTGAATCATGGAAGGCCTCAACCACTTCAATATGTGGTGAATGCAGCCTTCTTAGCAACCTTGTTCAGTGATTATCTTGATGCTGCTGATACTCCTGGATGGTATTGTGGACCCAACTTCTATTCCACTGATGTCTTGCGTGATTTTGCCAAGTTTCAGGTTGATTACATTCTTGGCAAGAATCCCCGGAAAATGAGCTATGTTACAGGTTTTGGCAATCATTACCCGAAACAAGTGCACCATAGAGCTGCATCGATTCCCAAGAATAAGATCAAATACAATTGCAAAGGGGGTTGGAAATGGAGGGACTCAAAAAAGCCAAACCCAAATATTATTGAAGGTGCCATGGTGGCTGGCCCTGACAAAAAAGATGGTTTCCATGATGTTCGTTCTAATTACAATTACACAGAGCCAACTCTTGCTGGAAATGCAGGTTTGGTATTTGCACTTGTTGGTTTGTCTGGAGACAAATCTGTTGGTATTGATAAAAATACCATTTTCTCCGCGGTTCCCCCAATGTTTCCAACTCCACCACCTCCTCCGGCACCCTGGAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

619

Amino Acids

68.47

Weight (kDa)

8.98

Isoelectric Point (pI)

30.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 111 - 583 2.5e-140 Glycosyl hydrolase family 9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019890)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0124191
rosa_multiflora Rmu_sc0002968.1_g000032
rosa_roxburghii Rroxscaffold_3G00224230
rosa_rugosa Rorug07G0303100
rosa_samantha Rh2BG317300 Rh2CG295200 Rh7DG447100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 765
Acc36I ACCTGC 4 cut(s) 90, 673, 1260, 1721
AccB1I GGYRCC 5 cut(s) 449, 887, 1085, 1640, 1843
AccBSI CCGCTC 1 cut(s) 121
AccII CGCG 2 cut(s) 298, 1805
AccIII TCCGGA 1 cut(s) 322
AclWI GGATC 4 cut(s) 8, 21, 195, 1288
AcoI YGGCCR 2 cut(s) 54, 116
AcyI GRCGYC 1 cut(s) 888
AfaI GTAC 6 cut(s) 5, 182, 560, 572, 715, 983
AfiI CCNNNNNNNGG 6 cut(s) 23, 97, 160, 313, 1109, 1167
AflIII ACRYGT 1 cut(s) 996
AgeI ACCGGT 1 cut(s) 785
AgsI TTSAA 7 cut(s) 367, 460, 508, 646, 1303, 1328, 1637
AhdI GACNNNNNGTC 1 cut(s) 272
AjnI CCWGG 4 cut(s) 943, 1183, 1393, 1847
AjuI GAANNNNNNNTTGG 2 cut(s) 884, 916
AluBI AGCT 9 cut(s) 141, 388, 543, 593, 607, 824, 1010, 1497, 1547
AluI AGCT 9 cut(s) 141, 388, 543, 593, 607, 824, 1010, 1497, 1547
Alw21I GWGCWC 6 cut(s) 609, 885, 943, 1147, 1247, 1539
Alw26I GTCTC 4 cut(s) 117, 122, 253, 1758
Alw44I GTGCAC 3 cut(s) 881, 1143, 1535
AlwI GGATC 4 cut(s) 8, 21, 195, 1288
Aor13HI TCCGGA 1 cut(s) 322
AoxI GGCC 9 cut(s) 25, 54, 116, 151, 861, 928, 1099, 1313, 1654
ApaI GGGCCC 1 cut(s) 155
ApaLI GTGCAC 3 cut(s) 881, 1143, 1535
AsiGI ACCGGT 1 cut(s) 785
AspLEI GCGC 3 cut(s) 106, 623, 890
AspS9I GGNCC 7 cut(s) 26, 88, 151, 152, 1100, 1409, 1655
AsuC2I CCSGG 6 cut(s) 98, 160, 447, 583, 1030, 1486
AsuHPI GGTGA 3 cut(s) 293, 452, 1348
AvaII GGWCC 2 cut(s) 88, 1409
BaeGI GKGCMC 4 cut(s) 155, 885, 1147, 1539
BamHI GGATCC 1 cut(s) 13
BanI GGYRCC 5 cut(s) 449, 887, 1085, 1640, 1843
BanII GRGCYC 3 cut(s) 155, 609, 1184
BarI GAAGNNNNNNTAC 2 cut(s) 164, 196
BauI CACGAG 1 cut(s) 424
BbsI GAAGAC 1 cut(s) 759
Bbv12I GWGCWC 6 cut(s) 609, 885, 943, 1147, 1247, 1539
BccI CCATC 6 cut(s) 431, 506, 667, 808, 1392, 1664
BceAI ACGGC 3 cut(s) 22, 60, 901
BcgI CGANNNNNNTGC 4 cut(s) 545, 579, 1516, 1550
BciT130I CCWGG 4 cut(s) 945, 1185, 1395, 1849
BclI TGATCA 1 cut(s) 727
BcnI CCSGG 6 cut(s) 98, 160, 447, 583, 1030, 1486
BcoDI GTCTC 4 cut(s) 117, 122, 253, 1758
BfaI CTAG 3 cut(s) 590, 1052, 1230
BfmI CTRYAG 3 cut(s) 83, 819, 934
BfoI RGCGCY 3 cut(s) 107, 624, 891
BfuAI ACCTGC 4 cut(s) 90, 673, 1260, 1721
BglI GCCNNNNNGGC 1 cut(s) 1649
BglII AGATCT 2 cut(s) 216, 463
BlpI GCTNAGC 1 cut(s) 539
BmcAI AGTACT 1 cut(s) 715
Bme18I GGWCC 2 cut(s) 88, 1409
BmeRI GACNNNNNGTC 1 cut(s) 272
BmgT120I GGNCC 7 cut(s) 26, 88, 151, 152, 1100, 1409, 1655
BmrI ACTGGG 1 cut(s) 994
BmsI GCATC 6 cut(s) 475, 484, 815, 845, 1369, 1559
BmuI ACTGGG 1 cut(s) 994
BpiI GAAGAC 1 cut(s) 759
BpmI CTGGAG 4 cut(s) 53, 510, 565, 1782
Bpu1102I GCTNAGC 1 cut(s) 539
BpuEI CTTGAG 3 cut(s) 620, 1198, 1228
BpuMI CCSGG 6 cut(s) 98, 160, 447, 583, 1030, 1486
Bsa29I ATCGAT 1 cut(s) 1553
BsaAI YACGTR 2 cut(s) 184, 997
BsaBI GATNNNNATC 1 cut(s) 221
BsaHI GRCGYC 1 cut(s) 888
BsaWI WCCGGW 2 cut(s) 322, 785
Bsc4I CCNNNNNNNGG 6 cut(s) 23, 97, 160, 313, 1109, 1167
Bse118I RCCGGY 1 cut(s) 785
Bse1I ACTGG 2 cut(s) 989, 1297
Bse8I GATNNNNATC 1 cut(s) 221
BseAI TCCGGA 1 cut(s) 322
BseBI CCWGG 4 cut(s) 945, 1185, 1395, 1849
BseCI ATCGAT 1 cut(s) 1553
BseGI GGATG 6 cut(s) 442, 836, 994, 1020, 1060, 1403
BseJI GATNNNNATC 1 cut(s) 221
BseLI CCNNNNNNNGG 6 cut(s) 23, 97, 160, 313, 1109, 1167
BseMII CTCAG 4 cut(s) 386, 530, 530, 801
BseNI ACTGG 2 cut(s) 989, 1297
BseRI GAGGAG 3 cut(s) 233, 309, 1827
BseSI GKGCMC 4 cut(s) 155, 885, 1147, 1539
BseX3I CGGCCG 1 cut(s) 116
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 1026
Bsh1236I CGCG 2 cut(s) 298, 1805
Bsh1285I CGRYCG 3 cut(s) 70, 97, 119
BshFI GGCC 9 cut(s) 27, 56, 118, 153, 863, 930, 1101, 1315, 1656
BshNI GGYRCC 5 cut(s) 449, 887, 1085, 1640, 1843
BshTI ACCGGT 1 cut(s) 785
BshVI ATCGAT 1 cut(s) 1553
BsiEI CGRYCG 3 cut(s) 70, 97, 119
BsiHKAI GWGCWC 6 cut(s) 609, 885, 943, 1147, 1247, 1539
BslFI GGGAC 3 cut(s) 250, 1139, 1619
BslI CCNNNNNNNGG 6 cut(s) 23, 97, 160, 313, 1109, 1167
BsmAI GTCTC 4 cut(s) 117, 122, 253, 1758
BsmBI CGTCTC 3 cut(s) 117, 122, 253
BsmFI GGGAC 3 cut(s) 250, 1139, 1619
BsmI GAATGC 1 cut(s) 1345
BsnI GGCC 9 cut(s) 27, 56, 118, 153, 863, 930, 1101, 1315, 1656
Bsp120I GGGCCC 1 cut(s) 151
Bsp1286I GDGCHC 8 cut(s) 155, 609, 885, 943, 1147, 1184, 1247, 1539
Bsp13I TCCGGA 1 cut(s) 322
Bsp1720I GCTNAGC 1 cut(s) 539
Bsp19I CCATGG 2 cut(s) 17, 1644
BspANI GGCC 9 cut(s) 27, 56, 118, 153, 863, 930, 1101, 1315, 1656
BspCNI CTCAG 4 cut(s) 385, 529, 531, 802
BspDI ATCGAT 1 cut(s) 1553
BspEI TCCGGA 1 cut(s) 322
BspFNI CGCG 2 cut(s) 298, 1805
BspMAI CTGCAG 2 cut(s) 87, 823
BspMI ACCTGC 4 cut(s) 90, 673, 1260, 1721
BspPI GGATC 4 cut(s) 8, 21, 195, 1288
BspQI GCTCTTC 1 cut(s) 905
BspT107I GGYRCC 5 cut(s) 449, 887, 1085, 1640, 1843
BsrBI CCGCTC 1 cut(s) 121
BsrFI RCCGGY 1 cut(s) 785
BsrI ACTGG 2 cut(s) 989, 1297
BssAI RCCGGY 1 cut(s) 785
BssNI GRCGYC 1 cut(s) 888
BssSI CACGAG 1 cut(s) 424
BssT1I CCWWGG 3 cut(s) 17, 312, 1644
Bst2BI CACGAG 1 cut(s) 424
Bst2UI CCWGG 4 cut(s) 945, 1185, 1395, 1849
Bst4CI ACNGT 4 cut(s) 232, 292, 563, 938
Bst6I CTCTTC 2 cut(s) 905, 919
BstACI GRCGYC 1 cut(s) 888
BstBAI YACGTR 2 cut(s) 184, 997
BstC8I GCNNGC 6 cut(s) 29, 143, 257, 261, 1080, 1654
BstDEI CTNAG 5 cut(s) 372, 516, 539, 810, 1351
BstDSI CCRYGG 3 cut(s) 17, 1644, 1803
BstEII GGTNACC 2 cut(s) 440, 1187
BstF5I GGATG 6 cut(s) 442, 836, 994, 1020, 1060, 1403
BstFNI CGCG 2 cut(s) 298, 1805
BstH2I RGCGCY 3 cut(s) 107, 624, 891
BstHHI GCGC 3 cut(s) 106, 623, 890
BstMAI GTCTC 4 cut(s) 117, 122, 253, 1758
BstMCI CGRYCG 3 cut(s) 70, 97, 119
BstNI CCWGG 4 cut(s) 945, 1185, 1395, 1849
BstNSI RCATGY 1 cut(s) 1082
BstPI GGTNACC 2 cut(s) 440, 1187
BstSFI CTRYAG 3 cut(s) 83, 819, 934
BstSLI GKGCMC 4 cut(s) 155, 885, 1147, 1539
BstUI CGCG 2 cut(s) 298, 1805
BstV2I GAAGAC 1 cut(s) 759
BstX2I RGATCY 4 cut(s) 13, 187, 216, 463
BstYI RGATCY 4 cut(s) 13, 187, 216, 463
BstZI CGGCCG 1 cut(s) 116
Bsu15I ATCGAT 1 cut(s) 1553
BsuRI GGCC 9 cut(s) 27, 56, 118, 153, 863, 930, 1101, 1315, 1656
BsuTUI ATCGAT 1 cut(s) 1553
BtgI CCRYGG 3 cut(s) 17, 1644, 1803
BtsCI GGATG 6 cut(s) 442, 836, 994, 1020, 1060, 1403
BtsIMutI CAGTG 4 cut(s) 568, 943, 1372, 1425
BveI ACCTGC 4 cut(s) 90, 673, 1260, 1721
Cac8I GCNNGC 6 cut(s) 29, 143, 257, 261, 1080, 1654
CfoI GCGC 3 cut(s) 106, 623, 890
Cfr10I RCCGGY 1 cut(s) 785
Cfr13I GGNCC 7 cut(s) 26, 88, 151, 152, 1100, 1409, 1655
Cfr42I CCGCGG 1 cut(s) 1806
ClaI ATCGAT 1 cut(s) 1553
CseI GACGC 5 cut(s) 139, 187, 247, 287, 418
Csp6I GTAC 6 cut(s) 4, 181, 559, 571, 714, 982
CspAI ACCGGT 1 cut(s) 785
CviQI GTAC 6 cut(s) 4, 181, 559, 571, 714, 982
DdeI CTNAG 5 cut(s) 372, 516, 539, 810, 1351
DinI GGCGCC 1 cut(s) 889
DriI GACNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 2 cut(s) 54, 116
EagI CGGCCG 1 cut(s) 116
Eam1104I CTCTTC 2 cut(s) 905, 919
Eam1105I GACNNNNNGTC 1 cut(s) 272
EarI CTCTTC 2 cut(s) 905, 919
EciI GGCGGA 1 cut(s) 62
Ecl136II GAGCTC 1 cut(s) 607
EclXI CGGCCG 1 cut(s) 116
Eco130I CCWWGG 3 cut(s) 17, 312, 1644
Eco147I AGGCCT 3 cut(s) 863, 930, 1315
Eco24I GRGCYC 3 cut(s) 155, 609, 1184
Eco47I GGWCC 2 cut(s) 88, 1409
Eco52I CGGCCG 1 cut(s) 116
Eco53kI GAGCTC 1 cut(s) 607
Eco91I GGTNACC 2 cut(s) 440, 1187
EcoICRI GAGCTC 1 cut(s) 607
EcoO109I RGGNCCY 2 cut(s) 88, 152
EcoO65I GGTNACC 2 cut(s) 440, 1187
EcoRII CCWGG 4 cut(s) 943, 1183, 1393, 1847
EcoT14I CCWWGG 3 cut(s) 17, 312, 1644
EcoT38I GRGCYC 3 cut(s) 155, 609, 1184
EgeI GGCGCC 1 cut(s) 889
EheI GGCGCC 1 cut(s) 889
ErhI CCWWGG 3 cut(s) 17, 312, 1644
Esp3I CGTCTC 3 cut(s) 117, 122, 253
FalI AAGNNNNNCTT 2 cut(s) 494, 526
FaqI GGGAC 3 cut(s) 250, 1139, 1619
FauI CCCGC 2 cut(s) 36, 463
FauNDI CATATG 1 cut(s) 1195
FbaI TGATCA 1 cut(s) 727
FokI GGATG 6 cut(s) 449, 823, 1001, 1027, 1047, 1410
FriOI GRGCYC 3 cut(s) 155, 609, 1184
FspBI CTAG 3 cut(s) 590, 1052, 1230
GlaI GCGC 3 cut(s) 105, 622, 889
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 4 cut(s) 53, 510, 565, 1782
HaeII RGCGCY 3 cut(s) 107, 624, 891
HaeIII GGCC 9 cut(s) 27, 56, 118, 153, 863, 930, 1101, 1315, 1656
HgaI GACGC 5 cut(s) 139, 187, 247, 287, 418
HhaI GCGC 3 cut(s) 106, 623, 890
Hin1I GRCGYC 1 cut(s) 888
Hin6I GCGC 3 cut(s) 104, 621, 888
HinP1I GCGC 3 cut(s) 104, 621, 888
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 8 cut(s) 50, 532, 742, 1222, 1303, 1480, 1555, 1607
HphI GGTGA 3 cut(s) 293, 452, 1348
Hpy166II GTNNAC 4 cut(s) 883, 1145, 1409, 1537
Hpy188I TCNGA 8 cut(s) 375, 393, 811, 911, 952, 1158, 1221, 1227
Hpy188III TCNNGA 9 cut(s) 226, 286, 323, 637, 693, 1177, 1207, 1376, 1761
Hpy8I GTNNAC 4 cut(s) 883, 1145, 1409, 1537
Hpy99I CGWCG 3 cut(s) 65, 68, 128
HpyAV CCTTC 6 cut(s) 652, 906, 1099, 1305, 1357, 1631
HpyCH4III ACNGT 4 cut(s) 232, 292, 563, 938
HpyCH4IV ACGT 3 cut(s) 183, 905, 996
HpyF3I CTNAG 5 cut(s) 372, 516, 539, 810, 1351
HpySE526I ACGT 3 cut(s) 183, 905, 996
Hsp92I GRCGYC 1 cut(s) 888
HspAI GCGC 3 cut(s) 104, 621, 888
KasI GGCGCC 1 cut(s) 887
Kpn2I TCCGGA 1 cut(s) 322
Ksp22I TGATCA 1 cut(s) 727
KspI CCGCGG 1 cut(s) 1806
LguI GCTCTTC 1 cut(s) 905
LmnI GCTCC 6 cut(s) 163, 246, 322, 546, 604, 946
LweI GCATC 6 cut(s) 475, 484, 815, 845, 1369, 1559
MaeI CTAG 3 cut(s) 590, 1052, 1230
MaeII ACGT 3 cut(s) 183, 905, 996
MaeIII GTNAC 6 cut(s) 299, 440, 476, 775, 1187, 1501
MbiI CCGCTC 1 cut(s) 121
MboII GAAGA 8 cut(s) 181, 184, 187, 355, 764, 892, 936, 1211
MfeI CAATTG 1 cut(s) 1579
MflI RGATCY 4 cut(s) 13, 187, 216, 463
MhlI GDGCHC 8 cut(s) 155, 609, 885, 943, 1147, 1184, 1247, 1539
MluCI AATT 4 cut(s) 970, 1579, 1693, 1699
Mly113I GGCGCC 1 cut(s) 888
MlyI GAGTC 4 cut(s) 44, 526, 736, 1601
MmeI TCCRAC 2 cut(s) 1574, 1847
MroI TCCGGA 1 cut(s) 322
MseI TTAA 2 cut(s) 849, 1272
MslI CAYNNNNRTG 3 cut(s) 402, 1083, 1238
MspA1I CMGCKG 3 cut(s) 31, 656, 1805
MunI CAATTG 1 cut(s) 1579
Mva1269I GAATGC 1 cut(s) 1345
MvaI CCWGG 4 cut(s) 945, 1185, 1395, 1849
MvnI CGCG 2 cut(s) 298, 1805
NarI GGCGCC 1 cut(s) 888
NciI CCSGG 6 cut(s) 98, 160, 447, 583, 1030, 1486
NcoI CCATGG 2 cut(s) 17, 1644
NdeI CATATG 1 cut(s) 1195
NmeAIII GCCGAG 2 cut(s) 32, 94
NmuCI GTSAC 3 cut(s) 299, 440, 775
NspI RCATGY 1 cut(s) 1082
PaeI GCATGC 1 cut(s) 1082
PceI AGGCCT 3 cut(s) 863, 930, 1315
PciSI GCTCTTC 1 cut(s) 905
PcsI WCGNNNNNNNCGW 3 cut(s) 279, 288, 902
PctI GAATGC 1 cut(s) 1345
PfeI GAWTC 4 cut(s) 1222, 1303, 1480, 1555
PfoI TCCNGGA 1 cut(s) 1393
PinAI ACCGGT 1 cut(s) 785
PleI GAGTC 4 cut(s) 44, 526, 736, 1601
PluTI GGCGCC 1 cut(s) 891
PpsI GAGTC 4 cut(s) 44, 526, 736, 1601
Ppu21I YACGTR 2 cut(s) 184, 997
PpuMI RGGWCCY 1 cut(s) 88
PsiI TTATAA 1 cut(s) 765
Psp124BI GAGCTC 1 cut(s) 609
Psp5II RGGWCCY 1 cut(s) 88
Psp6I CCWGG 4 cut(s) 943, 1183, 1393, 1847
PspEI GGTNACC 2 cut(s) 440, 1187
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 4 cut(s) 943, 1183, 1393, 1847
PspOMI GGGCCC 1 cut(s) 151
PspPI GGNCC 7 cut(s) 26, 88, 151, 152, 1100, 1409, 1655
PspPPI RGGWCCY 1 cut(s) 88
PstI CTGCAG 2 cut(s) 87, 823
PsuI RGATCY 4 cut(s) 13, 187, 216, 463
RsaI GTAC 6 cut(s) 5, 182, 560, 572, 715, 983
RsaNI GTAC 6 cut(s) 4, 181, 559, 571, 714, 982
RseI CAYNNNNRTG 3 cut(s) 402, 1083, 1238
SacI GAGCTC 1 cut(s) 609
SacII CCGCGG 1 cut(s) 1806
SapI GCTCTTC 1 cut(s) 905
SaqAI TTAA 2 cut(s) 849, 1272
Sau96I GGNCC 7 cut(s) 26, 88, 151, 152, 1100, 1409, 1655
SbfI CCTGCAGG 1 cut(s) 87
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 4 cut(s) 44, 526, 736, 1601
SdaI CCTGCAGG 1 cut(s) 87
SduI GDGCHC 8 cut(s) 155, 609, 885, 943, 1147, 1184, 1247, 1539
SfaNI GCATC 6 cut(s) 475, 484, 815, 845, 1369, 1559
SfcI CTRYAG 3 cut(s) 83, 819, 934
SfoI GGCGCC 1 cut(s) 889
Sfr303I CCGCGG 1 cut(s) 1806
SgrBI CCGCGG 1 cut(s) 1806
SinI GGWCC 2 cut(s) 88, 1409
SmiMI CAYNNNNRTG 3 cut(s) 402, 1083, 1238
SmlI CTYRAG 3 cut(s) 635, 1177, 1207
SmoI CTYRAG 3 cut(s) 635, 1177, 1207
SphI GCATGC 1 cut(s) 1082
Sse8387I CCTGCAGG 1 cut(s) 87
Sse9I AATT 4 cut(s) 970, 1579, 1693, 1699
SseBI AGGCCT 3 cut(s) 863, 930, 1315
SspDI GGCGCC 1 cut(s) 887
SspI AATATT 2 cut(s) 1260, 1630
SspMI CTAG 3 cut(s) 590, 1052, 1230
SstI GAGCTC 1 cut(s) 609
StuI AGGCCT 3 cut(s) 863, 930, 1315
StyI CCWWGG 3 cut(s) 17, 312, 1644
TaaI ACNGT 4 cut(s) 232, 292, 563, 938
TaiI ACGT 3 cut(s) 186, 908, 999
TaqI TCGA 6 cut(s) 93, 123, 555, 666, 745, 1553
TasI AATT 4 cut(s) 970, 1579, 1693, 1699
TatI WGTACW 2 cut(s) 558, 713
TauI GCSGC 8 cut(s) 27, 104, 121, 213, 298, 581, 798, 1101
TfiI GAWTC 4 cut(s) 1222, 1303, 1480, 1555
Tru1I TTAA 2 cut(s) 849, 1272
Tru9I TTAA 2 cut(s) 849, 1272
TscAI CASTG 4 cut(s) 568, 943, 1372, 1432
TseFI GTSAC 3 cut(s) 299, 440, 775
Tsp45I GTSAC 3 cut(s) 299, 440, 775
TspDTI ATGAA 2 cut(s) 1005, 1212
TspGWI ACGGA 1 cut(s) 949
TspRI CASTG 4 cut(s) 568, 943, 1372, 1432
VneI GTGCAC 3 cut(s) 881, 1143, 1535
VpaK11BI GGWCC 2 cut(s) 88, 1409
XceI RCATGY 1 cut(s) 1082
XcmI CCANNNNNNNNNTGG 1 cut(s) 1304
XspI CTAG 3 cut(s) 590, 1052, 1230
ZrmI AGTACT 1 cut(s) 715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.