Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0116841 RchiOBHm_Chr7g0193281 |
| rosa_rugosa | Rorug01G0074100 |
| rosa_samantha | Rh1AG011700 Rh1AG127800 Rh1BG073700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 4 cut(s) | 228, 252, 276, 344 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 205, 237 |
| AluBI | AGCT | 4 cut(s) | 50, 203, 347, 353 |
| AluI | AGCT | 4 cut(s) | 50, 203, 347, 353 |
| Alw26I | GTCTC | 1 cut(s) | 334 |
| Ama87I | CYCGRG | 1 cut(s) | 261 |
| ApeKI | GCWGC | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 3 cut(s) | 65, 293, 324 |
| AvaI | CYCGRG | 1 cut(s) | 261 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| BbvI | GCAGC | 1 cut(s) | 212 |
| BccI | CCATC | 1 cut(s) | 247 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 111, 145 |
| BcoDI | GTCTC | 1 cut(s) | 334 |
| BfmI | CTRYAG | 2 cut(s) | 198, 348 |
| BisI | GCNGC | 1 cut(s) | 201 |
| BlsI | GCNGC | 1 cut(s) | 202 |
| BmeT110I | CYCGRG | 1 cut(s) | 261 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| BsaI | GGTCTC | 1 cut(s) | 334 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 220, 250 |
| BseMII | CTCAG | 1 cut(s) | 191 |
| BseXI | GCAGC | 1 cut(s) | 212 |
| BsiHKCI | CYCGRG | 1 cut(s) | 261 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BsmAI | GTCTC | 1 cut(s) | 334 |
| Bso31I | GGTCTC | 1 cut(s) | 334 |
| BsoBI | CYCGRG | 1 cut(s) | 261 |
| Bsp143I | GATC | 2 cut(s) | 30, 95 |
| BspCNI | CTCAG | 1 cut(s) | 190 |
| BspMAI | CTGCAG | 1 cut(s) | 202 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspTNI | GGTCTC | 1 cut(s) | 334 |
| BssMI | GATC | 2 cut(s) | 30, 95 |
| Bst6I | CTCTTC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 1 cut(s) | 177 |
| BstKTI | GATC | 2 cut(s) | 33, 98 |
| BstMAI | GTCTC | 1 cut(s) | 334 |
| BstMBI | GATC | 2 cut(s) | 30, 95 |
| BstNSI | RCATGY | 1 cut(s) | 41 |
| BstSFI | CTRYAG | 2 cut(s) | 198, 348 |
| BstV1I | GCAGC | 1 cut(s) | 212 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BtsI | GCAGTG | 1 cut(s) | 335 |
| BtsIMutI | CAGTG | 1 cut(s) | 335 |
| CviAII | CATG | 2 cut(s) | 21, 38 |
| CviJI | RGCY | 8 cut(s) | 50, 65, 111, 163, 203, 260, 347, 353 |
| CviKI_1 | RGCY | 8 cut(s) | 50, 65, 111, 163, 203, 260, 347, 353 |
| DdeI | CTNAG | 1 cut(s) | 177 |
| DpnI | GATC | 2 cut(s) | 32, 97 |
| DpnII | GATC | 2 cut(s) | 30, 95 |
| Eam1104I | CTCTTC | 1 cut(s) | 210 |
| EarI | CTCTTC | 1 cut(s) | 210 |
| Eco31I | GGTCTC | 1 cut(s) | 334 |
| Eco88I | CYCGRG | 1 cut(s) | 261 |
| FaeI | CATG | 2 cut(s) | 24, 41 |
| FaiI | YATR | 4 cut(s) | 22, 39, 89, 350 |
| FatI | CATG | 2 cut(s) | 20, 37 |
| Fnu4HI | GCNGC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 1 cut(s) | 201 |
| GluI | GCNGC | 1 cut(s) | 201 |
| HapII | CCGG | 1 cut(s) | 257 |
| Hin1II | CATG | 2 cut(s) | 24, 41 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 3 cut(s) | 65, 293, 324 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 2 cut(s) | 180, 244 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyAV | CCTTC | 2 cut(s) | 177, 231 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 1 cut(s) | 177 |
| Hsp92II | CATG | 2 cut(s) | 24, 41 |
| Kzo9I | GATC | 2 cut(s) | 30, 95 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LpnPI | CCDG | 5 cut(s) | 36, 51, 129, 161, 270 |
| Lsp1109I | GCAGC | 1 cut(s) | 212 |
| MalI | GATC | 2 cut(s) | 32, 97 |
| MboI | GATC | 2 cut(s) | 30, 95 |
| MboII | GAAGA | 4 cut(s) | 133, 197, 216, 264 |
| MluCI | AATT | 2 cut(s) | 58, 252 |
| MmeI | TCCRAC | 2 cut(s) | 85, 236 |
| MseI | TTAA | 2 cut(s) | 194, 355 |
| MspI | CCGG | 1 cut(s) | 257 |
| NdeII | GATC | 2 cut(s) | 30, 95 |
| NlaIII | CATG | 2 cut(s) | 24, 41 |
| NspI | RCATGY | 1 cut(s) | 41 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PkrI | GCNGC | 1 cut(s) | 202 |
| PstI | CTGCAG | 1 cut(s) | 202 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| SaqAI | TTAA | 2 cut(s) | 194, 355 |
| SatI | GCNGC | 1 cut(s) | 201 |
| Sau3AI | GATC | 2 cut(s) | 30, 95 |
| SetI | ASST | 7 cut(s) | 52, 205, 223, 294, 330, 349, 355 |
| SfcI | CTRYAG | 2 cut(s) | 198, 348 |
| Sse9I | AATT | 2 cut(s) | 58, 252 |
| TaqII | GACCGA | 1 cut(s) | 135 |
| TasI | AATT | 2 cut(s) | 58, 252 |
| Tru1I | TTAA | 2 cut(s) | 194, 355 |
| Tru9I | TTAA | 2 cut(s) | 194, 355 |
| TscAI | CASTG | 1 cut(s) | 342 |
| TseI | GCWGC | 1 cut(s) | 200 |
| TspRI | CASTG | 1 cut(s) | 342 |
| XceI | RCATGY | 1 cut(s) | 41 |