No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000031.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00305340 |
| rosa_samantha | Rh1AG223200 Rh1BG189300 Rh1CG208000 Rh1DG218200 |
| rosa_wichuraiana | Rw1G019030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 142 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 46 |
| Alw26I | GTCTC | 1 cut(s) | 33 |
| ApeKI | GCWGC | 2 cut(s) | 173, 224 |
| AsuNHI | GCTAGC | 1 cut(s) | 227 |
| BbvI | GCAGC | 2 cut(s) | 185, 211 |
| BccI | CCATC | 2 cut(s) | 196, 286 |
| BcoDI | GTCTC | 1 cut(s) | 33 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BisI | GCNGC | 2 cut(s) | 174, 225 |
| BlsI | GCNGC | 2 cut(s) | 175, 226 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 46 |
| BmsI | GCATC | 1 cut(s) | 63 |
| BmtI | GCTAGC | 1 cut(s) | 231 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 1 cut(s) | 223 |
| BseGI | GGATG | 1 cut(s) | 78 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseMII | CTCAG | 2 cut(s) | 33, 264 |
| BseNI | ACTGG | 1 cut(s) | 223 |
| BseRI | GAGGAG | 1 cut(s) | 238 |
| BseXI | GCAGC | 2 cut(s) | 185, 211 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmAI | GTCTC | 1 cut(s) | 33 |
| Bsp143I | GATC | 1 cut(s) | 232 |
| BspCNI | CTCAG | 2 cut(s) | 32, 263 |
| BspOI | GCTAGC | 1 cut(s) | 231 |
| BsrI | ACTGG | 1 cut(s) | 223 |
| BssMI | GATC | 1 cut(s) | 232 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 179 |
| BstC8I | GCNNGC | 1 cut(s) | 229 |
| BstDEI | CTNAG | 2 cut(s) | 19, 250 |
| BstF5I | GGATG | 1 cut(s) | 78 |
| BstKTI | GATC | 1 cut(s) | 235 |
| BstMAI | GTCTC | 1 cut(s) | 33 |
| BstMBI | GATC | 1 cut(s) | 232 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 179 |
| BstV1I | GCAGC | 2 cut(s) | 185, 211 |
| BtsCI | GGATG | 1 cut(s) | 78 |
| BtsIMutI | CAGTG | 1 cut(s) | 258 |
| Cac8I | GCNNGC | 1 cut(s) | 229 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviJI | RGCY | 2 cut(s) | 30, 176 |
| CviKI_1 | RGCY | 2 cut(s) | 30, 176 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DdeI | CTNAG | 2 cut(s) | 19, 250 |
| DpnI | GATC | 1 cut(s) | 234 |
| DpnII | GATC | 1 cut(s) | 232 |
| DriI | GACNNNNNGTC | 1 cut(s) | 46 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 46 |
| FaiI | YATR | 4 cut(s) | 54, 120, 180, 316 |
| Fnu4HI | GCNGC | 2 cut(s) | 174, 225 |
| FokI | GGATG | 1 cut(s) | 85 |
| Fsp4HI | GCNGC | 2 cut(s) | 174, 225 |
| FspBI | CTAG | 1 cut(s) | 228 |
| GluI | GCNGC | 2 cut(s) | 174, 225 |
| HincII | GTYRAC | 1 cut(s) | 300 |
| HindII | GTYRAC | 1 cut(s) | 300 |
| HinfI | GANTC | 2 cut(s) | 41, 47 |
| Hpy166II | GTNNAC | 3 cut(s) | 85, 107, 300 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 38, 46, 161 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy8I | GTNNAC | 3 cut(s) | 85, 107, 300 |
| HpyAV | CCTTC | 2 cut(s) | 175, 252 |
| HpyCH4V | TGCA | 1 cut(s) | 76 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 179 |
| HpyF3I | CTNAG | 2 cut(s) | 19, 250 |
| Kzo9I | GATC | 1 cut(s) | 232 |
| LpnPI | CCDG | 3 cut(s) | 197, 204, 296 |
| Lsp1109I | GCAGC | 2 cut(s) | 185, 211 |
| LweI | GCATC | 1 cut(s) | 63 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MalI | GATC | 1 cut(s) | 234 |
| MboI | GATC | 1 cut(s) | 232 |
| MlyI | GAGTC | 2 cut(s) | 35, 56 |
| MnlI | CCTC | 4 cut(s) | 256, 256, 259, 298 |
| MslI | CAYNNNNRTG | 1 cut(s) | 71 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 179 |
| NdeII | GATC | 1 cut(s) | 232 |
| NheI | GCTAGC | 1 cut(s) | 227 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PkrI | GCNGC | 2 cut(s) | 175, 226 |
| PleI | GAGTC | 2 cut(s) | 35, 55 |
| PpsI | GAGTC | 2 cut(s) | 35, 55 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| RseI | CAYNNNNRTG | 1 cut(s) | 71 |
| SatI | GCNGC | 2 cut(s) | 174, 225 |
| Sau3AI | GATC | 1 cut(s) | 232 |
| SchI | GAGTC | 2 cut(s) | 35, 56 |
| SetI | ASST | 2 cut(s) | 133, 290 |
| SfaNI | GCATC | 1 cut(s) | 63 |
| SgeI | CNNG | 9 cut(s) | 58, 114, 147, 181, 224, 231, 240, 295, 301 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 71 |
| SspMI | CTAG | 1 cut(s) | 228 |
| TaqI | TCGA | 1 cut(s) | 290 |
| TscAI | CASTG | 1 cut(s) | 258 |
| TseI | GCWGC | 2 cut(s) | 173, 224 |
| TspDTI | ATGAA | 2 cut(s) | 52, 107 |
| TspRI | CASTG | 1 cut(s) | 258 |
| XspI | CTAG | 1 cut(s) | 228 |