Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0009719

Physical Location & Seq

Genomic Coordinates Forward (+)

67333182 .. 67338388

Gene Structure 5207 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG409700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGTACGTAGTTGGGATCAAGATTGAGGTTTTGGCTGAGAAAATGGGCAAGAGAGTAGAGGCTTTGTTCATTTTCTTGATCATTGGGACAATCTTTCATATTGTGAATGGTGATCCAGTTGAAGATAAGCAAGCTTTGCTTGATTTCCTTCACAATGTTTCTCACACACGCCCTCTAAATTGGAGTGAAAACTCATCTGTATGCGGAAATTGGACCGCTGTGATCTGCAACAAAGATAAGTCCAGAATCATAGAGCTTCATTTGCCTGGAGTTGGCTTAAATGGTCCAATCCCACTTAACACTCTCAGCCGTCTGTCTTCGCTTTCGGTTCTGAGTCTCAGATTGAATAGCTTCACAGGTCCATTCCCTTCTGATTTTGCTAAACTTGGAAAGTTAACCTCCCTTTATCTTCAATCCAACAAGTTCACAGGGCCATTACCTTCGGATTTTTCGGTTTGGAAGAATCTCACTGTCCTGAATCTCTCAAACAATGCATTTAGTGGGAGCATCCCTTCTTCGATTTCCAACTTGACTCACGTGACATATCTGAGTCTTGCTAACAACTCCCTTTCGGGTGAAATTCCTGACCTCAATGTTCCTAGTGTGCAGCAGCTTGATCTAGCCAACAACAATCTCACAGGCAGTGTGCCCAAGTCTCTTGAAAGATTCCCAAGTTCGGCCTTTTCCGGTAACAATCTTTCTTCACCAGCCCTTCCCCCAGCTCTTCCAGTTCAACCACCTAGTTCTTCTCAACCAAATAGTGACAAGAAGTTGGGTGAGCCTGCAATATTGGGAATTGCGATTGGCGGGTGTGTTCTGGGGTTTGTACTGATTTCCTTTTTCATGATCATTTGCTGCTCCAAGAAATCAGATGGTGATGATAATGGAGGGGTTGCAAAAGCACAGAAGAAACAAGCGGTTTTAAAGAAGGGTGTTTCGGGGAACCTAGACAAGGATAACAGGCTTTCCTTCTTTGAGGGTTCCAATTTTGCATTTGATTTAGAGGACTTGCTGAGGGCATCTGCTGAGGTTCTTGGTAAGGGAACCTTTGGGACAACGTATAAGGCGGCTTTGGAAGATGCAAATACTGTTGCGGTGAAGAGGTTGAAAGAAGTAAGTGTCGGAAAGAAGGAATTTGAGCAGCAGATGCAGATTGTGGGAAGCATCAGCCATGAGAATGTCGCGCCGCTGAGGGCGTATTACTACTCCAAGGATGAGAAGCTTGTTGTGTATGATTACTTCGAGCAGGGAAGCACCGCAGCAATGTTACATGTTAAAAGAGGACAGGGCAGGACTCCACTCGACTGGGACACCCGACTCAAAATAGCAGTTGGTGCAGCGAGAGGCATTGCTCATATCCACACACACAGTGGTGGGAAGCTTGTCCATGGAAACATAAAGGCCTCGAACGTTTTCCTTAACCCTCAAGGATATGGTTGTGTGTCTGATGTCGGCTTACCAACACTGATGAGTCCAATGCCTCCACCAGCAGTGCGCAATGGAGGATATCGAGCCCCGGAAGTGGGAGACACTCGGAAATCTACCCCTGCATCTGATGTTTATAGTTTCGGGGTGCTGTTGCTCGAGCTTCTCACTGGAAAAAGCCCAATACATACAACAGGTGGCGAAGAGGTTGTTCACTTGGTGAGGTGGGTGAACTCGGTGGTCAGAGAGGAATGGACAGCAGAAGTGTTTGATGTGGAGCTACTGAGGTACCAAAACATCGAGGAGGAGATGGTCGAGATGTTACAGATAGGAATGTCTTGCGTGGCCAGAATGCCCGAGCAGCGACCAATAATGCTGGATGTCATGAAGAAGGTGGAGGAAGTTCGTCAAGTAAATACTGTGACTCCAGTTAATCAACCATCTCCATCAGAAATATCTACTCCAGCCATAATACCTTCTGTAGCTGATACGGGGCTCATAGCATCAACCTCTCAAGCACCAGCACAAGCACAAGCAGAAGCACAAGGACAAGGACAAGGACAAGGACAAGGACAAGGACAAGGGAAAGGACAAGGGCAAGCACAAGCACAAGAACAAGCACAAGGACAAGCACAAGAACAAGCACAAGCAGTTCTCATAGCATCAACCTCAGCACAAGCAGCACAAGCACAAGCACAAGCACAAGCACAACCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

714

Amino Acids

76.62

Weight (kDa)

6.53

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	41 - 77	5.7e-07	Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr	PF07714	343 - 605	4.8e-31	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	343 - 605	6e-29	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009719)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g30900 FvH4_7g30900
malus_domestica	MD01G1214100.v1.1 MD07G1283700.v1.1
prunus_persica	Prupe.2G306100_v2.0.a1 Prupe.2G306100_v2.0.a1 Prupe.2G306100_v2.0.a1 Prupe.2G306100_v2.0.a1 Prupe.2G306100_v2.0.a1 Prupe.2G306100_v2.0.a1
pyrus_communis	pycom01g22480 pycom07g25790
rosa_chinensis	RchiOBHm_Chr1g0379981
rosa_laevigata	RLG00000026343
rosa_multiflora	Rmu_sc0004184.1_g000015
rosa_roxburghii	Rroxscaffold_4G00279810
rosa_rugosa	Rorug01G0416100.1
rosa_samantha	Rh1AG440800 Rh1BG396500 Rh1CG409700 Rh1DG427300
rosa_wichuraiana	Rw1G038330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1496
Acc65I	GGTACC	1 cut(s)	1713
AccB1I	GGYRCC	1 cut(s)	1713
AccII	CGCG	1 cut(s)	1184
AciI	CCGC	8 cut(s)	204, 216, 807, 917, 1067, 1094, 1187, 1257
AclI	AACGTT	1 cut(s)	1410
AclWI	GGATC	2 cut(s)	23, 107
AcoI	YGGCCR	1 cut(s)	1770
AcsI	RAATTY	2 cut(s)	579, 1133
AcvI	CACGTG	1 cut(s)	538
AdeI	CACNNNGTG	2 cut(s)	1370, 1645
AfaI	GTAC	3 cut(s)	5, 828, 1715
AfiI	CCNNNNNNNGG	5 cut(s)	272, 676, 952, 1522, 1523
AflIII	ACRYGT	1 cut(s)	1270
AgsI	TTSAA	6 cut(s)	122, 346, 413, 662, 734, 1108
AjnI	CCWGG	1 cut(s)	265
AleI	CACNNNNGTG	1 cut(s)	1371
Alw26I	GTCTC	3 cut(s)	341, 660, 1521
AlwI	GGATC	2 cut(s)	23, 107
Ama87I	CYCGRG	2 cut(s)	1583, 1781
AoxI	GGCC	4 cut(s)	431, 678, 1401, 1770
ApeKI	GCWGC	8 cut(s)	607, 610, 855, 1141, 1259, 1337, 1786, 2105
ApoI	RAATTY	2 cut(s)	579, 1133
Asp700I	GAANNNNTTC	2 cut(s)	350, 1412
Asp718I	GGTACC	1 cut(s)	1713
AspLEI	GCGC	2 cut(s)	1186, 1497
AspS9I	GGNCC	4 cut(s)	213, 284, 359, 431
AsuC2I	CCSGG	1 cut(s)	1517
AsuHPI	GGTGA	8 cut(s)	122, 587, 696, 788, 887, 1108, 1657, 1666
AvaI	CYCGRG	2 cut(s)	1583, 1781
AvaII	GGWCC	3 cut(s)	213, 284, 359
BaeGI	GKGCMC	1 cut(s)	651
BaeI	ACNNNNGTAYC	2 cut(s)	1697, 1730
BalI	TGGCCA	1 cut(s)	1772
BanI	GGYRCC	1 cut(s)	1713
BanII	GRGCYC	2 cut(s)	1516, 1923
BarI	GAAGNNNNNNTAC	2 cut(s)	1223, 1255
BbrPI	CACGTG	1 cut(s)	538
BbsI	GAAGAC	1 cut(s)	309
BbvCI	CCTCAGC	4 cut(s)	1013, 1026, 1190, 2095
BbvI	GCAGC	8 cut(s)	619, 622, 842, 1153, 1271, 1349, 1798, 2117
BccI	CCATC	4 cut(s)	866, 1729, 1873, 1879
BceAI	ACGGC	1 cut(s)	294
BciT130I	CCWGG	1 cut(s)	267
BclI	TGATCA	2 cut(s)	78, 846
BcnI	CCSGG	1 cut(s)	1517
BcoDI	GTCTC	3 cut(s)	341, 660, 1521
BfaI	CTAG	4 cut(s)	600, 620, 741, 947
BfmI	CTRYAG	1 cut(s)	1905
Bme1390I	CCNGG	2 cut(s)	267, 1517
Bme18I	GGWCC	3 cut(s)	213, 284, 359
BmeT110I	CYCGRG	2 cut(s)	1583, 1781
BmgT120I	GGNCC	4 cut(s)	213, 284, 359, 431
BmiI	GGNNCC	4 cut(s)	944, 982, 1045, 1715
BmrFI	CCNGG	2 cut(s)	267, 1517
BmrI	ACTGGG	1 cut(s)	1315
BmsI	GCATC	8 cut(s)	516, 1028, 1069, 1137, 1173, 1559, 1937, 2096
BmuI	ACTGGG	1 cut(s)	1315
BpiI	GAAGAC	1 cut(s)	309
BpmI	CTGGAG	3 cut(s)	288, 1836, 1872
Bpu10I	CCTNAGC	4 cut(s)	1013, 1026, 1190, 2095
BpuEI	CTTGAG	2 cut(s)	1410, 1923
BpuMI	CCSGG	1 cut(s)	1517
BsaAI	YACGTR	2 cut(s)	7, 538
BsaJI	CCNNGG	3 cut(s)	1209, 1387, 1515
BsaWI	WCCGGW	1 cut(s)	686
BsaXI	ACNNNNNCTCC	2 cut(s)	1834, 1864
Bsc4I	CCNNNNNNNGG	5 cut(s)	272, 676, 952, 1522, 1523
Bse1I	ACTGG	5 cut(s)	116, 728, 1310, 1600, 1853
Bse3DI	GCAATG	3 cut(s)	1269, 1347, 1504
BseBI	CCWGG	1 cut(s)	267
BseDI	CCNNGG	3 cut(s)	1209, 1387, 1515
BseGI	GGATG	3 cut(s)	507, 1219, 1810
BseLI	CCNNNNNNNGG	5 cut(s)	272, 676, 952, 1522, 1523
BseMI	GCAATG	3 cut(s)	1269, 1347, 1504
BseNI	ACTGG	5 cut(s)	116, 728, 1310, 1600, 1853
BseRI	GAGGAG	2 cut(s)	1742, 1745
BseSI	GKGCMC	1 cut(s)	651
BseXI	GCAGC	8 cut(s)	619, 622, 842, 1153, 1271, 1349, 1798, 2117
BseYI	CCCAGC	1 cut(s)	718
BsgI	GTGCAG	2 cut(s)	626, 1356
Bsh1236I	CGCG	1 cut(s)	1184
BshFI	GGCC	4 cut(s)	433, 680, 1403, 1772
BshNI	GGYRCC	1 cut(s)	1713
BsiHKCI	CYCGRG	2 cut(s)	1583, 1781
BsiSI	CCGG	2 cut(s)	687, 1517
BslFI	GGGAC	3 cut(s)	100, 1066, 1322
BslI	CCNNNNNNNGG	5 cut(s)	272, 676, 952, 1522, 1523
BsmAI	GTCTC	3 cut(s)	341, 660, 1521
BsmFI	GGGAC	3 cut(s)	100, 1066, 1322
BsmI	GAATGC	1 cut(s)	1782
BsnI	GGCC	4 cut(s)	433, 680, 1403, 1772
BsoBI	CYCGRG	2 cut(s)	1583, 1781
Bsp1286I	GDGCHC	3 cut(s)	651, 1516, 1923
Bsp143I	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
Bsp19I	CCATGG	1 cut(s)	1387
BspACI	CCGC	8 cut(s)	204, 216, 807, 917, 1067, 1094, 1187, 1257
BspANI	GGCC	4 cut(s)	433, 680, 1403, 1772
BspFNI	CGCG	1 cut(s)	1184
BspHI	TCATGA	2 cut(s)	843, 1809
BspLI	GGNNCC	4 cut(s)	944, 982, 1045, 1715
BspPI	GGATC	2 cut(s)	23, 107
BspQI	GCTCTTC	1 cut(s)	729
BspT107I	GGYRCC	1 cut(s)	1713
BsrDI	GCAATG	3 cut(s)	1269, 1347, 1504
BsrI	ACTGG	5 cut(s)	116, 728, 1310, 1600, 1853
BssECI	CCNNGG	3 cut(s)	1209, 1387, 1515
BssMI	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
BssT1I	CCWWGG	2 cut(s)	1209, 1387
Bst2UI	CCWGG	1 cut(s)	267
Bst4CI	ACNGT	4 cut(s)	472, 1090, 1370, 1846
Bst6I	CTCTTC	3 cut(s)	729, 1094, 1623
BstAPI	GCANNNNNTGC	3 cut(s)	136, 1147, 1334
BstBAI	YACGTR	2 cut(s)	7, 538
BstC8I	GCNNGC	3 cut(s)	132, 783, 2025
BstDSI	CCRYGG	1 cut(s)	1387
BstENI	CCTNNNNNAGG	1 cut(s)	950
BstF5I	GGATG	3 cut(s)	507, 1219, 1810
BstFNI	CGCG	1 cut(s)	1184
BstHHI	GCGC	2 cut(s)	1186, 1497
BstKTI	GATC	6 cut(s)	18, 81, 115, 225, 619, 849
BstMAI	GTCTC	3 cut(s)	341, 660, 1521
BstMBI	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
BstMWI	GCNNNNNNNGC	7 cut(s)	136, 262, 1147, 1334, 1786, 2105, 2111
BstNI	CCWGG	1 cut(s)	267
BstNSI	RCATGY	1 cut(s)	1274
BstSCI	CCNGG	2 cut(s)	265, 1515
BstSFI	CTRYAG	1 cut(s)	1905
BstSLI	GKGCMC	1 cut(s)	651
BstSNI	TACGTA	1 cut(s)	7
BstUI	CGCG	1 cut(s)	1184
BstV1I	GCAGC	8 cut(s)	619, 622, 842, 1153, 1271, 1349, 1798, 2117
BstV2I	GAAGAC	1 cut(s)	309
BstXI	CCANNNNNNTGG	1 cut(s)	1305
BsuRI	GGCC	4 cut(s)	433, 680, 1403, 1772
BtgI	CCRYGG	1 cut(s)	1387
BtsCI	GGATG	3 cut(s)	507, 1219, 1810
BtsI	GCAGTG	2 cut(s)	649, 1497
BtsIMutI	CAGTG	6 cut(s)	468, 649, 1375, 1463, 1497, 1593
Cac8I	GCNNGC	3 cut(s)	132, 783, 2025
CciI	TCATGA	2 cut(s)	843, 1809
CfoI	GCGC	2 cut(s)	1186, 1497
Cfr13I	GGNCC	4 cut(s)	213, 284, 359, 431
Csp6I	GTAC	3 cut(s)	4, 827, 1714
CviAII	CATG	5 cut(s)	844, 1172, 1271, 1388, 1810
CviQI	GTAC	3 cut(s)	4, 827, 1714
DpnI	GATC	6 cut(s)	17, 80, 114, 224, 618, 848
DpnII	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
DraI	TTTAAA	1 cut(s)	924
DraIII	CACNNNGTG	2 cut(s)	1370, 1645
EaeI	YGGCCR	1 cut(s)	1770
Eam1104I	CTCTTC	3 cut(s)	729, 1094, 1623
EarI	CTCTTC	3 cut(s)	729, 1094, 1623
Eco105I	TACGTA	1 cut(s)	7
Eco130I	CCWWGG	2 cut(s)	1209, 1387
Eco147I	AGGCCT	1 cut(s)	1403
Eco24I	GRGCYC	2 cut(s)	1516, 1923
Eco32I	GATATC	1 cut(s)	1508
Eco47I	GGWCC	3 cut(s)	213, 284, 359
Eco72I	CACGTG	1 cut(s)	538
Eco88I	CYCGRG	2 cut(s)	1583, 1781
EcoNI	CCTNNNNNAGG	1 cut(s)	950
EcoRII	CCWGG	1 cut(s)	265
EcoRV	GATATC	1 cut(s)	1508
EcoT14I	CCWWGG	2 cut(s)	1209, 1387
EcoT22I	ATGCAT	1 cut(s)	496
EcoT38I	GRGCYC	2 cut(s)	1516, 1923
ErhI	CCWWGG	2 cut(s)	1209, 1387
FaeI	CATG	5 cut(s)	847, 1175, 1274, 1391, 1813
FalI	AAGNNNNNCTT	4 cut(s)	123, 155, 1031, 1063
FaqI	GGGAC	3 cut(s)	100, 1066, 1322
FatI	CATG	5 cut(s)	843, 1171, 1270, 1387, 1809
FauI	CCCGC	1 cut(s)	800
FbaI	TGATCA	2 cut(s)	78, 846
FokI	GGATG	3 cut(s)	494, 1226, 1817
FriOI	GRGCYC	2 cut(s)	1516, 1923
FspBI	CTAG	4 cut(s)	600, 620, 741, 947
FspI	TGCGCA	1 cut(s)	1496
GlaI	GCGC	2 cut(s)	1185, 1496
GsaI	CCCAGC	1 cut(s)	722
GsuI	CTGGAG	3 cut(s)	288, 1836, 1872
HaeIII	GGCC	4 cut(s)	433, 680, 1403, 1772
HapII	CCGG	2 cut(s)	687, 1517
HhaI	GCGC	2 cut(s)	1186, 1497
Hin1II	CATG	5 cut(s)	847, 1175, 1274, 1391, 1813
Hin6I	GCGC	2 cut(s)	1184, 1495
HinP1I	GCGC	2 cut(s)	1184, 1495
HincII	GTYRAC	1 cut(s)	396
HindII	GTYRAC	1 cut(s)	396
HindIII	AAGCTT	3 cut(s)	132, 1220, 1379
HpaI	GTTAAC	1 cut(s)	396
HpaII	CCGG	2 cut(s)	687, 1517
HphI	GGTGA	8 cut(s)	122, 587, 696, 788, 887, 1108, 1657, 1666
Hpy166II	GTNNAC	4 cut(s)	396, 426, 1639, 1657
Hpy188III	TCNNGA	9 cut(s)	19, 76, 243, 475, 584, 659, 844, 1741, 1810
Hpy8I	GTNNAC	4 cut(s)	396, 426, 1639, 1657
HpyCH4III	ACNGT	4 cut(s)	472, 1090, 1370, 1846
HpyCH4IV	ACGT	4 cut(s)	6, 537, 1058, 1410
HpyF10VI	GCNNNNNNNGC	7 cut(s)	136, 262, 1147, 1334, 1786, 2105, 2111
HpySE526I	ACGT	4 cut(s)	6, 537, 1058, 1410
Hsp92II	CATG	5 cut(s)	847, 1175, 1274, 1391, 1813
HspAI	GCGC	2 cut(s)	1184, 1495
KpnI	GGTACC	1 cut(s)	1717
Ksp22I	TGATCA	2 cut(s)	78, 846
KspAI	GTTAAC	1 cut(s)	396
Kzo9I	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
LguI	GCTCTTC	1 cut(s)	729
LmnI	GCTCC	3 cut(s)	504, 863, 1702
Lsp1109I	GCAGC	8 cut(s)	619, 622, 842, 1153, 1271, 1349, 1798, 2117
LweI	GCATC	8 cut(s)	516, 1028, 1069, 1137, 1173, 1559, 1937, 2096
MaeI	CTAG	4 cut(s)	600, 620, 741, 947
MaeII	ACGT	4 cut(s)	6, 537, 1058, 1410
MaeIII	GTNAC	6 cut(s)	538, 689, 761, 1266, 1746, 1846
MalI	GATC	6 cut(s)	17, 80, 114, 224, 618, 848
MboI	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
MhlI	GDGCHC	3 cut(s)	651, 1516, 1923
MlsI	TGGCCA	1 cut(s)	1772
MluCI	AATT	6 cut(s)	178, 208, 579, 795, 985, 1133
MluNI	TGGCCA	1 cut(s)	1772
MlyI	GAGTC	7 cut(s)	343, 526, 559, 1288, 1311, 1480, 1843
MmeI	TCCRAC	3 cut(s)	441, 549, 1102
Mox20I	TGGCCA	1 cut(s)	1772
Mph1103I	ATGCAT	1 cut(s)	496
MroXI	GAANNNNTTC	2 cut(s)	350, 1412
MscI	TGGCCA	1 cut(s)	1772
MseI	TTAA	7 cut(s)	278, 297, 395, 923, 1275, 1419, 1857
MslI	CAYNNNNRTG	3 cut(s)	199, 1176, 1371
Msp20I	TGGCCA	1 cut(s)	1772
MspA1I	CMGCKG	2 cut(s)	218, 1189
MspI	CCGG	2 cut(s)	687, 1517
MspR9I	CCNGG	2 cut(s)	267, 1517
Mva1269I	GAATGC	1 cut(s)	1782
MvaI	CCWGG	1 cut(s)	267
MvnI	CGCG	1 cut(s)	1184
MwoI	GCNNNNNNNGC	7 cut(s)	136, 262, 1147, 1334, 1786, 2105, 2111
NciI	CCSGG	1 cut(s)	1517
NcoI	CCATGG	1 cut(s)	1387
NdeII	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
NlaIII	CATG	5 cut(s)	847, 1175, 1274, 1391, 1813
NlaIV	GGNNCC	4 cut(s)	944, 982, 1045, 1715
NmuCI	GTSAC	3 cut(s)	538, 761, 1846
NsbI	TGCGCA	1 cut(s)	1496
NsiI	ATGCAT	1 cut(s)	496
NspI	RCATGY	1 cut(s)	1274
OliI	CACNNNNGTG	1 cut(s)	1371
PaeR7I	CTCGAG	1 cut(s)	1583
PagI	TCATGA	2 cut(s)	843, 1809
PceI	AGGCCT	1 cut(s)	1403
PciI	ACATGT	1 cut(s)	1270
PciSI	GCTCTTC	1 cut(s)	729
PctI	GAATGC	1 cut(s)	1782
PdmI	GAANNNNTTC	2 cut(s)	350, 1412
PfeI	GAWTC	4 cut(s)	246, 463, 478, 666
PleI	GAGTC	7 cut(s)	342, 526, 558, 1288, 1311, 1479, 1843
PmaCI	CACGTG	1 cut(s)	538
PmlI	CACGTG	1 cut(s)	538
PpsI	GAGTC	7 cut(s)	342, 526, 558, 1288, 1311, 1479, 1843
Ppu21I	YACGTR	2 cut(s)	7, 538
PscI	ACATGT	1 cut(s)	1270
Psp1406I	AACGTT	1 cut(s)	1410
Psp6I	CCWGG	1 cut(s)	265
PspCI	CACGTG	1 cut(s)	538
PspFI	CCCAGC	1 cut(s)	718
PspGI	CCWGG	1 cut(s)	265
PspN4I	GGNNCC	4 cut(s)	944, 982, 1045, 1715
PspPI	GGNCC	4 cut(s)	213, 284, 359, 431
PspXI	VCTCGAGB	1 cut(s)	1583
RsaI	GTAC	3 cut(s)	5, 828, 1715
RsaNI	GTAC	3 cut(s)	4, 827, 1714
RseI	CAYNNNNRTG	3 cut(s)	199, 1176, 1371
SapI	GCTCTTC	1 cut(s)	729
SaqAI	TTAA	7 cut(s)	278, 297, 395, 923, 1275, 1419, 1857
Sau3AI	GATC	6 cut(s)	15, 78, 112, 222, 616, 846
Sau96I	GGNCC	4 cut(s)	213, 284, 359, 431
SchI	GAGTC	7 cut(s)	343, 526, 559, 1288, 1311, 1480, 1843
ScrFI	CCNGG	2 cut(s)	267, 1517
SduI	GDGCHC	3 cut(s)	651, 1516, 1923
SfaNI	GCATC	8 cut(s)	516, 1028, 1069, 1137, 1173, 1559, 1937, 2096
SfcI	CTRYAG	1 cut(s)	1905
Sfr274I	CTCGAG	1 cut(s)	1583
SinI	GGWCC	3 cut(s)	213, 284, 359
SlaI	CTCGAG	1 cut(s)	1583
SmiMI	CAYNNNNRTG	3 cut(s)	199, 1176, 1371
SmlI	CTYRAG	3 cut(s)	1425, 1583, 1938
SmoI	CTYRAG	3 cut(s)	1425, 1583, 1938
SnaBI	TACGTA	1 cut(s)	7
Sse9I	AATT	6 cut(s)	178, 208, 579, 795, 985, 1133
SseBI	AGGCCT	1 cut(s)	1403
SsiI	CCGC	8 cut(s)	204, 216, 807, 917, 1067, 1094, 1187, 1257
SspI	AATATT	1 cut(s)	789
SspMI	CTAG	4 cut(s)	600, 620, 741, 947
StuI	AGGCCT	1 cut(s)	1403
StyD4I	CCNGG	2 cut(s)	265, 1515
StyI	CCWWGG	2 cut(s)	1209, 1387
TaaI	ACNGT	4 cut(s)	472, 1090, 1370, 1846
TaiI	ACGT	4 cut(s)	9, 540, 1061, 1413
TaqI	TCGA	8 cut(s)	518, 1242, 1302, 1406, 1510, 1584, 1725, 1740
TasI	AATT	6 cut(s)	178, 208, 579, 795, 985, 1133
TatI	WGTACW	1 cut(s)	826
TauI	GCSGC	2 cut(s)	1070, 1189
TfiI	GAWTC	4 cut(s)	246, 463, 478, 666
Tru1I	TTAA	7 cut(s)	278, 297, 395, 923, 1275, 1419, 1857
Tru9I	TTAA	7 cut(s)	278, 297, 395, 923, 1275, 1419, 1857
TscAI	CASTG	6 cut(s)	475, 649, 1375, 1470, 1497, 1600
TseFI	GTSAC	3 cut(s)	538, 761, 1846
TseI	GCWGC	8 cut(s)	607, 610, 855, 1141, 1259, 1337, 1786, 2105
Tsp45I	GTSAC	3 cut(s)	538, 761, 1846
TspDTI	ATGAA	5 cut(s)	58, 86, 248, 832, 1826
TspRI	CASTG	6 cut(s)	475, 649, 1375, 1470, 1497, 1600
VpaK11BI	GGWCC	3 cut(s)	213, 284, 359
XagI	CCTNNNNNAGG	1 cut(s)	950
XapI	RAATTY	2 cut(s)	579, 1133
XceI	RCATGY	1 cut(s)	1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1367
XhoI	CTCGAG	1 cut(s)	1583
XmnI	GAANNNNTTC	2 cut(s)	350, 1412
XspI	CTAG	4 cut(s)	600, 620, 741, 947
Zsp2I	ATGCAT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.